Receptor
PDB id Resolution Class Description Source Keywords
1BFC 2.2 Å NON-ENZYME: SIGNAL_HORMONE BASIC FIBROBLAST GROWTH FACTOR COMPLEXED WITH HEPARIN HEXAME HOMO SAPIENS GROWTH FACTOR MITOGEN VASCULARIZATION HEPARIN-BINDING
Ref.: HEPARIN STRUCTURE AND INTERACTIONS WITH BASIC FIBRO GROWTH FACTOR. SCIENCE V. 271 1116 1996
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SGN IDS SGN IDS SGN UAP B:1;
 Valid;
 none;
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1720.31 n/a S(=O)...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4OEE 1.5 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURE ANALYSIS OF FGF2-DISACCHARIDE (S3I2) COMPL HOMO SAPIENS HEPARIN/HEPARIN SULFATE BINDING PROTEIN BINDING
Ref.: INTERACTIONS THAT INFLUENCE THE BINDING OF SYNTHETI SULFATE BASED DISACCHARIDES TO FIBROBLAST GROWTH FA ACS CHEM.BIOL. V. 9 1712 2014
Members (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 289 families.
1 1BFC - SGN IDS SGN IDS SGN UAP n/a n/a
2 1BFB - SGN IDS SGN UAP n/a n/a
3 4OEE Kd = 1.73 uM IDY GNX n/a n/a
4 4OEG Kd = 9.01 uM IDY SUS n/a n/a
5 4OEF Kd = 17.5 uM IDY SGN n/a n/a
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 214 families.
1 1BFC - SGN IDS SGN IDS SGN UAP n/a n/a
2 1BFB - SGN IDS SGN UAP n/a n/a
3 4OEE Kd = 1.73 uM IDY GNX n/a n/a
4 4OEG Kd = 9.01 uM IDY SUS n/a n/a
5 4OEF Kd = 17.5 uM IDY SGN n/a n/a
50% Homology Family (9)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 181 families.
1 3JUT - GTQ C7 H6 O4 c1cc(c(cc1....
2 1HKN - N2M C10 H9 N O3 S c1cc2cc(cc....
3 2UUS - GU4 YYJ n/a n/a
4 3K1X - DBX C6 H6 O5 S c1cc(c(cc1....
5 1BFC - SGN IDS SGN IDS SGN UAP n/a n/a
6 1BFB - SGN IDS SGN UAP n/a n/a
7 4OEE Kd = 1.73 uM IDY GNX n/a n/a
8 4OEG Kd = 9.01 uM IDY SUS n/a n/a
9 4OEF Kd = 17.5 uM IDY SGN n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: SGN IDS SGN IDS SGN UAP; Similar ligands found: 18
No: Ligand ECFP6 Tc MDL keys Tc
1 SGN IDS SGN UAP 1 1
2 SGN IDS SGN IDS SGN UAP 1 1
3 IDS SGN IDS SGN UAP 0.794643 0.969231
4 SGN IDS SGN IDS 0.757282 0.96875
5 SGN IDS SGN IDS SGN 0.681416 0.939394
6 IDS SGN IDS SGN IDS 0.583333 0.953846
7 GNS UAP 0.582524 0.969231
8 IDS SGN IDS SGN IDS SGN 0.578512 0.939394
9 IDS SGN IDS SGN IDS SUS IDS SGN 0.556452 0.953846
10 ZDO IDS SUS BDP SGN 0.534884 0.925373
11 SGN IDU 0.5 0.938462
12 IDY SGN 0.5 0.910448
13 SGN UAP 0.482456 0.925373
14 IDY SUS 0.464912 0.880597
15 GNS IDR GNS IDR GNS IDR GNS IDR 0.441667 0.953846
16 BDP NPO GNS IDS GNS BDP GNS 0.438849 0.815789
17 IDY GNX 0.408696 0.867647
18 8EX GCD 0.408333 0.880597
Similar Ligands (3D)
Ligand no: 1; Ligand: SGN IDS SGN IDS SGN UAP; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4OEE; Ligand: IDY GNX; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4oee.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
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