Receptor
PDB id Resolution Class Description Source Keywords
1EJ4 2.25 Å NON-ENZYME: TRANSCRIPT_TRANSLATE COCRYSTAL STRUCTURE OF EIF4E/4E-BP1 PEPTIDE MUS MUSCULUS EIF4E/4E-BP/7-METHYL-GDP TRANSLATION
Ref.: CAP-DEPENDENT TRANSLATION INITIATION IN EUKARYOTES IS REGULATED BY A MOLECULAR MIMIC OF EIF4G. MOL.CELL V. 3 707 1999
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
M7G A:1000;
Valid;
none;
submit data
459.243 C11 H19 N5 O11 P2 CN1CN...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1EJ4 2.25 Å NON-ENZYME: TRANSCRIPT_TRANSLATE COCRYSTAL STRUCTURE OF EIF4E/4E-BP1 PEPTIDE MUS MUSCULUS EIF4E/4E-BP/7-METHYL-GDP TRANSLATION
Ref.: CAP-DEPENDENT TRANSLATION INITIATION IN EUKARYOTES IS REGULATED BY A MOLECULAR MIMIC OF EIF4G. MOL.CELL V. 3 707 1999
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 257 families.
1 1EJ4 - M7G C11 H19 N5 O11 P2 CN1CN(C2=C....
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 222 families.
1 1WKW - GTA C21 H30 N10 O17 P3 C[n+]1cn(c....
2 1EJ4 - M7G C11 H19 N5 O11 P2 CN1CN(C2=C....
3 2V8W Kd = 0.146 uM MGO C12 H20 N4 O14 P3 C[n+]1cn(c....
4 2V8Y Kd = 1.96 uM MGV C17 H20 F N5 O8 P c1cc(ccc1C....
5 2V8X Kd = 6.95 uM MGQ C17 H21 N5 O8 P c1ccc(cc1)....
50% Homology Family (9)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 185 families.
1 1WKW - GTA C21 H30 N10 O17 P3 C[n+]1cn(c....
2 3HXG Kd = 0.27 uM GTA C21 H30 N10 O17 P3 C[n+]1cn(c....
3 1EJ4 - M7G C11 H19 N5 O11 P2 CN1CN(C2=C....
4 2V8W Kd = 0.146 uM MGO C12 H20 N4 O14 P3 C[n+]1cn(c....
5 2V8Y Kd = 1.96 uM MGV C17 H20 F N5 O8 P c1cc(ccc1C....
6 2V8X Kd = 6.95 uM MGQ C17 H21 N5 O8 P c1ccc(cc1)....
7 1EJH - M7G C11 H19 N5 O11 P2 CN1CN(C2=C....
8 3M94 - M7M C13 H23 N5 O11 P2 CN1CN(C2=C....
9 2JGB Ka = 410000 M^-1 MGT C11 H20 N5 O14 P3 CN1CN(C2=C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: M7G; Similar ligands found: 11
No: Ligand ECFP6 Tc MDL keys Tc
1 M7G 1 1
2 MGT 0.910256 1
3 M7M 0.541667 0.963855
4 G8D 0.537634 0.914634
5 TPG 0.525 0.920455
6 8GT 0.494845 0.914634
7 CDP 0.43617 0.829268
8 UDP 0.430108 0.780488
9 8GM 0.412371 0.902439
10 8OD 0.411765 0.77907
11 8GD 0.407767 0.872093
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1EJ4; Ligand: M7G; Similar sites found: 63
This union binding pocket(no: 1) in the query (biounit: 1ej4.bio1) has 9 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2Q4V ACO 0.02623 0.41118 0.588235
2 2A8X FAD 0.03791 0.4275 1.57895
3 4M52 FAD 0.04162 0.42183 1.57895
4 2FV5 541 0.01807 0.43108 2.10526
5 2Z3U CRR 0.02832 0.40073 2.10526
6 5IN4 GDP 0.01419 0.46993 2.63158
7 5IN4 NAP 0.01459 0.46993 2.63158
8 5IN4 6CK 0.01821 0.46286 2.63158
9 2GJP BGC GLC DAF GLC GLC GLC DAF 0.01367 0.4415 2.63158
10 2WOX NDP 0.01927 0.4362 2.63158
11 3HIW C2X 0.02351 0.40067 2.63158
12 1MO9 KPC 0.003323 0.50584 3.15789
13 2F5Z FAD 0.02692 0.43869 3.15789
14 1ZMD FAD 0.02842 0.4358 3.15789
15 2VVT I24 0.03394 0.42352 3.15789
16 2VVT DGL 0.01798 0.41712 3.15789
17 2VK4 TPP 0.03841 0.40365 3.15789
18 1LVL FAD 0.03182 0.43314 3.49345
19 1G27 BB1 0.02705 0.40276 4.16667
20 1GET NAP 0.009949 0.45638 4.21053
21 1GET FAD 0.009539 0.45638 4.21053
22 4TM3 FAD 0.02265 0.4541 4.21053
23 3O84 HTJ 0.02185 0.41218 4.21053
24 4DR9 BB2 0.02468 0.40212 4.21053
25 1Y8Q ATP 0.04507 0.40073 4.21053
26 3QFA FAD 0.03763 0.42552 4.31034
27 3RT4 LP5 0.03154 0.40843 4.67836
28 1Q1R FAD 0.01675 0.44797 4.73684
29 3WDM ADN 0.03659 0.4218 4.73684
30 1EBF NAD 0.01476 0.40818 4.73684
31 3RNM FAD 0.02916 0.43303 5.17241
32 3HB5 NAP 0.02249 0.44609 5.26316
33 2RAB NAD 0.02157 0.44078 5.26316
34 1PJS NAD 0.007907 0.43479 5.26316
35 3ICR FAD 0.02046 0.43231 5.26316
36 3ICS FAD 0.02666 0.42442 5.26316
37 2RAB FAD 0.03802 0.42433 5.26316
38 1ND2 MYR 0.01929 0.41403 5.26316
39 3ICT FAD 0.03838 0.41144 5.26316
40 5U8U FAD 0.02595 0.45077 5.78947
41 2HQM FAD 0.03441 0.42854 5.78947
42 5KVS NAP 0.03969 0.40523 5.78947
43 4EMJ FAD 0.008623 0.46194 6.31579
44 4EMI NAD 0.02676 0.43381 6.31579
45 4EMI FAD 0.01764 0.43146 6.31579
46 1FEC FAD 0.03281 0.43104 6.84211
47 5L7G 6QE 0.01601 0.4078 6.84211
48 5ECP MET 0.03759 0.4245 7.36842
49 5ECP JAA 0.03759 0.4245 7.36842
50 3CGB FAD 0.04669 0.41748 7.36842
51 3NTD FAD 0.03914 0.4147 7.36842
52 4G74 UQ5 0.04209 0.41719 7.89474
53 4G74 FAD 0.03353 0.41532 7.89474
54 2Q46 NAP 0.04429 0.40866 7.89474
55 4LPS GDP 0.01396 0.40098 7.89474
56 2WPF FAD 0.009098 0.46451 10.5263
57 4JDR FAD 0.04687 0.413 11.0526
58 2V6O FAD 0.02914 0.4435 11.5789
59 1V59 FAD 0.04944 0.41498 11.5789
60 3AB1 FAD 0.02663 0.4367 12.1053
61 4JE7 BB2 0.008185 0.41678 18.7817
62 1MZC BNE 0.01513 0.4366 42.8571
63 5C1P ADP 0.04435 0.4029 42.8571
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