Receptor
PDB id Resolution Class Description Source Keywords
1EOM 2.1 Å EC: 3.2.1.96 CRYSTAL STRUCTURE OF THE COMPLEX OF ENDO-BETA-N-ACETYLGLUCOS F3 WITH A BIANTENNARY COMPLEX OCTASACCHARIDE ELIZABETHKINGIA MENINGOSEPTICA (ALPHA/BETA)-BARREL HYDROLASE
Ref.: STRUCTURAL BASIS FOR THE SUBSTRATE SPECIFICITY OF ENDO-BETA-N-ACETYLGLUCOSAMINIDASE F(3). BIOCHEMISTRY V. 39 7878 2000
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAG MAN MAN MAN NAG GAL NAG GAL B:1;
 Valid;
 none;
 submit data
n/a n/a
SO4 A:700;
A:701;
A:702;
A:703;
A:704;
A:705;
 Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
none;
none;
 submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1EOM 2.1 Å EC: 3.2.1.96 CRYSTAL STRUCTURE OF THE COMPLEX OF ENDO-BETA-N-ACETYLGLUCOS F3 WITH A BIANTENNARY COMPLEX OCTASACCHARIDE ELIZABETHKINGIA MENINGOSEPTICA (ALPHA/BETA)-BARREL HYDROLASE
Ref.: STRUCTURAL BASIS FOR THE SUBSTRATE SPECIFICITY OF ENDO-BETA-N-ACETYLGLUCOSAMINIDASE F(3). BIOCHEMISTRY V. 39 7878 2000
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1EOM - NAG MAN MAN MAN NAG GAL NAG GAL n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1EOM - NAG MAN MAN MAN NAG GAL NAG GAL n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1EOM - NAG MAN MAN MAN NAG GAL NAG GAL n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: NAG MAN MAN MAN NAG GAL NAG GAL; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: NAG MAN MAN MAN NAG GAL NAG GAL; Similar ligands found: 1
No: Ligand Similarity coefficient
1 NAG MAN MAN MAN NAG GAL NAG GAL 1.0000
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1EOM; Ligand: NAG MAN MAN MAN NAG GAL NAG GAL; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1eom.bio1) has 21 residues
No: Leader PDB Ligand Sequence Similarity
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