Receptor
PDB id Resolution Class Description Source Keywords
1G5N 1.9 Å NON-ENZYME: OTHER ANNEXIN V COMPLEX WITH HEPARIN OLIGOSACCHARIDES RATTUS NORVEGICUS HELIX-BUNDLE MEMBRANE BINDING HEPARIN HEPARAN SULFATE BLCLOTTING
Ref.: ANNEXIN V--HEPARIN OLIGOSACCHARIDE COMPLEX SUGGESTS SULFATE--MEDIATED ASSEMBLY ON CELL SURFACES. STRUCTURE V. 9 57 2001
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:401;
A:402;
A:403;
A:404;
A:406;
A:407;
A:408;
A:409;
A:410;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
40.078 Ca [Ca+2...
UAP SGN IDS SGN A:801;
A:901;
Valid;
Valid;
none;
none;
submit data
1146.88 n/a S(=O)...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1G5N 1.9 Å NON-ENZYME: OTHER ANNEXIN V COMPLEX WITH HEPARIN OLIGOSACCHARIDES RATTUS NORVEGICUS HELIX-BUNDLE MEMBRANE BINDING HEPARIN HEPARAN SULFATE BLCLOTTING
Ref.: ANNEXIN V--HEPARIN OLIGOSACCHARIDE COMPLEX SUGGESTS SULFATE--MEDIATED ASSEMBLY ON CELL SURFACES. STRUCTURE V. 9 57 2001
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 1A8B - GPE C5 H14 N O6 P C(CO[P@](=....
2 1A8A - GSE C6 H14 N O8 P C([C@H](CO....
3 1G5N - UAP SGN IDS SGN n/a n/a
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 1A8B - GPE C5 H14 N O6 P C(CO[P@](=....
2 1A8A - GSE C6 H14 N O8 P C([C@H](CO....
3 1G5N - UAP SGN IDS SGN n/a n/a
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 2HYU - UAP SGN IDS SGN n/a n/a
2 2HYV - UAP SGN IDS SGN IDS n/a n/a
3 1A8B - GPE C5 H14 N O6 P C(CO[P@](=....
4 1A8A - GSE C6 H14 N O8 P C([C@H](CO....
5 1G5N - UAP SGN IDS SGN n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: UAP SGN IDS SGN; Similar ligands found: 21
No: Ligand ECFP6 Tc MDL keys Tc
1 SGN IDS UAP SGN IDS SGN 1 1
2 UAP SGN IDS SGN IDS SGN 1 1
3 UAP SGN IDS SGN 1 1
4 SGN IDS UAP SGN 1 1
5 UAP SGN IDS SGN IDS 0.794643 0.969231
6 SGN IDS SGN IDS 0.757282 0.96875
7 H1S 0.739583 0.984375
8 SGN IDS SGN IDS SGN 0.681416 0.939394
9 IDS SGN IDS SGN IDS 0.583333 0.953846
10 H3S 0.582524 0.969231
11 IDS SGN IDS SGN IDS IDS 0.578512 0.939394
12 SGN IDS SGN IDS SGN IDS 0.578512 0.939394
13 IDS SGN IDS SGN IDS SUS IDS SGN 0.556452 0.953846
14 NGY BDP SGN IDS SGN BDP 0.507353 0.898551
15 SGN IXD 0.5 0.938462
16 SGN IDY 0.5 0.910448
17 IDU SGN 0.5 0.938462
18 SUS IDY 0.464912 0.880597
19 GNS BDP GNS IDS GNS BDP NPO 0.438849 0.815789
20 GNX IDY 0.408696 0.867647
21 GCD 8EX 0.408333 0.880597
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1G5N; Ligand: UAP SGN IDS SGN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1g5n.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1G5N; Ligand: UAP SGN IDS SGN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1g5n.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
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