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Receptor
PDB id Resolution Class Description Source Keywords
1H2K 2.15 Å EC: 1.14.11.16 FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FR PEPTIDE HOMO SAPIENS TRANSCRIPTION ACTIVATOR-INHIBITOR COMPLEX FIH HIF DSBH OTRANSCRIPTION HYPOXIA 2- OXOGLUTARATE ASPARAGINYL HYDROXPHOSPHORYLATION
Ref.: STRUCTURE OF FACTOR-INHIBITING HYPOXIA-INDUCIBLE FA (HIF) REVEALS MECHANISM OF OXIDATIVE MODIFICATION O HIF-1ALPHA J.BIOL.CHEM. V. 278 1802 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FE2 A:1350;
Part of Protein;
none;
submit data
55.845 Fe [Fe+2...
OGA A:1351;
Valid;
none;
submit data
147.086 C4 H5 N O5 C(C(=...
SO4 A:1352;
A:1353;
Invalid;
Invalid;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1H2K 2.15 Å EC: 1.14.11.16 FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FR PEPTIDE HOMO SAPIENS TRANSCRIPTION ACTIVATOR-INHIBITOR COMPLEX FIH HIF DSBH OTRANSCRIPTION HYPOXIA 2- OXOGLUTARATE ASPARAGINYL HYDROXPHOSPHORYLATION
Ref.: STRUCTURE OF FACTOR-INHIBITING HYPOXIA-INDUCIBLE FA (HIF) REVEALS MECHANISM OF OXIDATIVE MODIFICATION O HIF-1ALPHA J.BIOL.CHEM. V. 278 1802 2003
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 6 families.
1 1H2K - OGA C4 H5 N O5 C(C(=O)O)N....
2 1H2L - AKG C5 H6 O5 C(CC(=O)O)....
3 2ILM - AKG C5 H6 O5 C(CC(=O)O)....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 1H2M - OGA C4 H5 N O5 C(C(=O)O)N....
2 1H2K - OGA C4 H5 N O5 C(C(=O)O)N....
3 1H2L - AKG C5 H6 O5 C(CC(=O)O)....
4 2ILM - AKG C5 H6 O5 C(CC(=O)O)....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 1H2M - OGA C4 H5 N O5 C(C(=O)O)N....
2 1H2K - OGA C4 H5 N O5 C(C(=O)O)N....
3 1H2L - AKG C5 H6 O5 C(CC(=O)O)....
4 2ILM - AKG C5 H6 O5 C(CC(=O)O)....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: OGA; Similar ligands found: 2
No: Ligand ECFP6 Tc MDL keys Tc
1 OGA 1 1
2 AAC 0.461538 0.827586
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1H2K; Ligand: OGA; Similar sites found with APoc: 238
This union binding pocket(no: 1) in the query (biounit: 1h2k.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
1 2WCV FUC 1.42857
2 3NNF AKG 1.45349
3 2C1Q BTN 1.5873
4 5YBL AKG 1.59236
5 1UNB AKG 1.60772
6 1UNB PN1 1.60772
7 5Y4K AKR 1.7192
8 3B1Q NOS 1.84049
9 5ZM4 9FU 1.96078
10 5ZM4 AKG 1.96078
11 5F3I 5UJ 2.00573
12 5A3T MMK 2.00573
13 4IGQ THR M3L GLN 2.00573
14 5LY2 OGA 2.00573
15 5FWE OGA 2.00573
16 3OPT AKG 2.00573
17 4IGQ OGA 2.00573
18 2P5B OGA 2.00573
19 2Q8E OGA 2.00573
20 2OS2 OGA 2.00573
21 2YBP 2HG 2.00573
22 6H8P OGA 2.00573
23 6EXF LYS 2.00573
24 4B2Z P5S 2.29226
25 4QDC ASD 2.29226
26 1H8S AIC 2.38095
27 5FP4 YC8 2.39521
28 2AOT 2PM 2.39726
29 3NKT 1HN 2.5788
30 2WBP ZZU 2.5788
31 2WBP SIN 2.5788
32 2OAZ I96 2.5788
33 1SFF IK2 2.5788
34 2Y3S TIR 2.64151
35 3GJB AKG 2.82132
36 4UF0 MMK 2.86533
37 5HSS 650 2.86533
38 5A61 3PO 2.86533
39 1HG4 LPP 2.86738
40 2Y88 2ER 2.86885
41 3C3N FMN 2.88462
42 5C5T AKG 3.07018
43 4OJ8 2TQ 3.07167
44 4OJ8 AKG 3.07167
45 2JIG PD2 3.125
46 2OG7 SIN 3.15186
47 1Y52 BTN 3.1746
48 4BCS BTN 3.2
49 3VHH VHH 3.25203
50 1NX4 AKG 3.2967
51 3FSM 2NC 3.44828
52 1N5S ADL 3.57143
53 4E90 7RG 3.64742
54 5HV0 AKG 3.68664
55 3AVR OGA 3.72493
56 6FUL E7Z 3.72493
57 5FWJ MMK 3.72493
58 4RFR RHN 3.94089
59 4XAC AKG 3.96825
60 1OS7 AKG 4.24028
61 1OS7 TAU 4.24028
62 5CAD PCA 4.29799
63 3GM5 CIT 4.40252
64 5JSP DQY 4.47761
65 4MPO AMP 4.57516
66 5OES ADP 4.58453
67 4QM9 CYS 4.62428
68 4MLO PAM 4.71014
69 6F6J CUW 4.87106
70 6F6J SIN 4.87106
71 4RQL SNE 4.87106
72 4OCT AKG 4.95496
73 2AEB ABH 4.96894
74 2ET1 GLV 4.97512
75 3MKN DNB 5.06329
76 3WW2 LPK 5.07812
77 3WW2 SF6 5.07812
78 5O9W AKG 5.15759
79 4CU7 GIF 5.15759
80 5NW7 9C2 5.15759
81 3EW2 BTN 5.18518
82 1J3R 6PG 5.26316
83 2GC0 PAN 5.31915
84 6CDG PRO GLY LEU TRP LYS SER 5.38922
85 2BUC 008 5.44413
86 1LRH NLA 5.52147
87 4ZU5 THM 5.55556
88 5DEY 59T 5.72391
89 2A1X AKG 5.84416
90 5FLJ QUE 5.91398
91 5TFZ 7BC 6
92 4NPL AKG 6
93 6HDT BTN 6.01504
94 2FCU AKG 6.07029
95 2IFB PLM 6.10687
96 4P7X YCP 6.16438
97 4P7X AKG 6.16438
98 3FW4 CAQ 6.17978
99 5FPX GLY SER SER HIS HIS HIS HIS HIS 6.19469
100 2YG2 S1P 6.39535
101 5M0T AKG 6.46258
102 5E2N V14 6.46388
103 3SCH TB6 6.56566
104 1ZZ7 S0H 6.56566
105 2IGA XX2 6.87679
106 5A65 TPP 6.91244
107 1WBI BTN 6.97674
108 2FLI DX5 7.27273
109 5UQD AKG 7.31707
110 1GQG DCD 7.31707
111 3MPB FRU 7.31707
112 5KD6 LBU 7.31707
113 4Z28 BTN 7.31707
114 4IKR PVP 7.31707
115 3KJM 245 7.44986
116 1QXW M1C 7.53968
117 5IVE 6E8 7.57576
118 3SM2 478 7.57576
119 4NAO AKG 7.66871
120 4XF6 INS 7.69231
121 4XF6 ADP 7.69231
122 4XF6 LIP 7.69231
123 5A5W GUO 7.90514
124 1UU6 BGC BGC BGC BGC 8.03571
125 3KV4 OGA 8.59599
126 4BJ8 BTN 8.73016
127 5UWA 8ND 8.86699
128 5XEG AKG 9.52381
129 4ZXA H8N 9.52381
130 2IUW AKG 9.7561
131 5C3R AKG 9.7561
132 5C3R HMU 9.7561
133 3ACL 3F1 9.7561
134 1OLM VTQ 9.7561
135 2C1P FNZ 9.7561
136 1MDC PLM 9.84848
137 5I0U DCY 10
138 3PUA OGA 10.0287
139 5T2Z 017 10.101
140 1QY1 PRZ 10.3448
141 4HSJ 6PC 10.3448
142 4ZU4 4TG 10.8108
143 4BXF AKG 12.0344
144 5ML3 DL3 12.0805
145 6EOZ 58K 12.1951
146 6EOZ AKG 12.1951
147 4IE6 UN9 12.1951
148 3KV5 OGA 12.1951
149 4XCB HY0 12.1951
150 4XCB AKG 12.1951
151 3H9A PPY 12.1951
152 5KJU 6TO 12.1951
153 3H7J PPY 12.1951
154 5EQU 5R6 12.1951
155 5EQU AKG 12.1951
156 1GP6 SIN 12.1951
157 1GP6 QUE 12.1951
158 1GP6 DH2 12.1951
159 5YBN AKG 12.7389
160 1V7R CIT 12.9032
161 1ODM ASV 12.9909
162 1POT SPD 13.5385
163 4R38 RBF 13.5714
164 4J25 OGA 14.6341
165 1DRY AAG 14.6341
166 1DRY AKG 14.6341
167 6MPT C30 14.6341
168 5X2Z 3LM 14.6341
169 2ZCQ B65 14.6341
170 4BX7 B4F 14.6341
171 4C0C WVH 14.6341
172 3HX3 RET 14.6341
173 4Y3O OGA 16.3324
174 4CCK OGA 16.6189
175 4CCN OGA 16.6189
176 5OX6 A1Z 17.0732
177 2OBD PCW 17.0732
178 6F68 GSH 17.0732
179 6F68 4EU 17.0732
180 2UZ2 BTN 17.0732
181 5L9V OGA 17.0732
182 3HQR OGA 17.0732
183 5L9B AKG 17.0732
184 5YW0 SIN 17.0732
185 4JZR 4JR 17.0732
186 2OBD 2OB 17.0732
187 2PVN P63 17.0732
188 4QXB OGA 17.6471
189 5IQT AKG 19.5122
190 5IQT 6CU 19.5122
191 4GBD MCF 19.5122
192 4YRD 3IT 19.5122
193 5FAL COA 19.5122
194 5FAL SKT 19.5122
195 1OIK C26 19.5122
196 1OIK AKG 19.5122
197 1OIJ AKG 19.5122
198 2HKA C3S 19.5122
199 3ZDS HMQ 19.5122
200 3ZDS OMD 19.5122
201 3ZDS HQ9 19.5122
202 3UYK 0CX 19.5122
203 2VAR KDG 19.5122
204 5KR7 6X9 21.9512
205 3W21 AKG 21.9512
206 4M26 ZZU 21.9512
207 4M26 SIN 21.9512
208 1NYW DAU 21.9512
209 3QT6 2P0 21.9512
210 2RDQ AKG 21.9512
211 2Z93 END 21.9512
212 4M26 AKG 21.9512
213 5U98 1KX 21.9512
214 4JNJ BTN 23.4783
215 5YJS SAL 24.3902
216 2XFH CL6 24.3902
217 4H03 LAR 24.3902
218 2RG0 CBI 24.3902
219 2RFY CBI 24.3902
220 5I0F GLC GLC 24.3902
221 3N9Q OGA 24.6418
222 3N9P OGA 24.6418
223 3N9O OGA 24.6418
224 3PUR 2HG 24.6418
225 5LUN ARG 26.8293
226 5LUN OGA 26.8293
227 4BG1 OGA 26.8293
228 4BG1 IVL 26.8293
229 5Y72 DST 26.8293
230 4Q0P 0MK 29.2683
231 6FXR AKG 29.2683
232 4LIT AKG 34.1463
233 4Q0A 4OA 34.1463
234 4CCO OGA 35
235 6F6D AKG 43.9024
236 5FP3 3JI 43.9024
237 6F4T OGA 46.2745
238 5EPA AKG 46.3415
Pocket No.: 2; Query (leader) PDB : 1H2K; Ligand: OGA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1h2k.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
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