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- Structure Biounit | Ligand Information
- PDB : .ZIP | .CSV
- Family 90% : .ZIP | .CSV
- Class : .ZIP | .CSV
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 197 families. | |||||
1 | 1B5H | Kd = 0.97 uM | LYS DPP LYS | n/a | n/a |
2 | 1B3G | Kd = 200 nM | LYS ILE LYS | n/a | n/a |
3 | 1B40 | Kd = 53 nM | LYS PHE LYS | n/a | n/a |
4 | 1JET | Kd = 56 nM | LYS ALA LYS | n/a | n/a |
5 | 1B5I | Kd = 90 nM | LYS ASN LYS | n/a | n/a |
6 | 1B5J | Kd = 37 nM | LYS GLN LYS | n/a | n/a |
7 | 2OLB | Kd = 2900 nM | LYS LYS LYS | n/a | n/a |
8 | 1B6H | Kd = 0.015 uM | LYS NVA LYS | n/a | n/a |
9 | 1B7H | Kd = 0.0095 uM | LYS NLE LYS | n/a | n/a |
10 | 1B0H | Kd = 0.2 uM | LYS ALN LYS | n/a | n/a |
11 | 1B46 | Kd = 5200 nM | LYS PRO LYS | n/a | n/a |
12 | 1B4Z | Kd = 5900 nM | LYS ASP LYS | n/a | n/a |
13 | 1B3L | Kd = 1300 nM | LYS GLY LYS | n/a | n/a |
14 | 1QKA | Kd = 1200 nM | LYS ARG LYS | n/a | n/a |
15 | 1B3F | Kd = 130 nM | LYS HIS LYS | n/a | n/a |
16 | 1B52 | Kd = 76 nM | LYS THR LYS | n/a | n/a |
17 | 1OLA | - | VAL LYS PRO GLY | n/a | n/a |
18 | 1B2H | Kd = 29 uM | LYS ORN LYS | n/a | n/a |
19 | 1B4H | Kd = 3.44 uM | LYS DAB LYS | n/a | n/a |
20 | 1B9J | Kd = 1100 nM | LYS LEU LYS | n/a | n/a |
21 | 1OLC | Kd = 2.7 uM | LYS LYS LYS ALA | n/a | n/a |
22 | 1B3H | Kd = 0.62 uM | LYS ALC LYS | n/a | n/a |
23 | 1JEU | Kd = 150 nM | LYS GLU LYS | n/a | n/a |
24 | 2RKM | Ki = 125 uM | LYS LYS | n/a | n/a |
25 | 1B51 | Kd = 43 nM | LYS SER LYS | n/a | n/a |
26 | 1B58 | Kd = 260 nM | LYS TYR LYS | n/a | n/a |
27 | 1JEV | Kd = 130 nM | LYS TRP LYS | n/a | n/a |
28 | 1QKB | Kd = 45 nM | LYS VAL LYS | n/a | n/a |
29 | 1B1H | Kd = 0.093 uM | LYS HPE LYS | n/a | n/a |
30 | 1B32 | Kd = 79 nM | LYS MET LYS | n/a | n/a |
31 | 1B05 | Kd = 75 nM | LYS CYS LYS | n/a | n/a |
32 | 6DQT | - | LEU GLY GLY | n/a | n/a |
33 | 6DTG | - | TYR LEU GLY ALA ASN GLY | n/a | n/a |
34 | 6DQR | - | MET GLY GLY | n/a | n/a |
35 | 6DTH | - | ARG PRO PRO GLY PHE | n/a | n/a |
36 | 6DQQ | - | ALA ALA ALA ALA | n/a | n/a |
37 | 6DQU | - | GLY ILE ILE ASN THR LEU | n/a | n/a |
38 | 6DTF | - | LYS LYS LYS | n/a | n/a |
39 | 3TCG | Kd = 1.36 uM | LYS GLY GLU | n/a | n/a |
40 | 2Z23 | - | LYS LYS LYS | n/a | n/a |
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 165 families. | |||||
1 | 3O9P | Kd = 0.3 uM | MHI | C15 H26 N4 O8 | C[C@@H](C(.... |
2 | 1B5H | Kd = 0.97 uM | LYS DPP LYS | n/a | n/a |
3 | 1B3G | Kd = 200 nM | LYS ILE LYS | n/a | n/a |
4 | 1B40 | Kd = 53 nM | LYS PHE LYS | n/a | n/a |
5 | 1JET | Kd = 56 nM | LYS ALA LYS | n/a | n/a |
6 | 1B5I | Kd = 90 nM | LYS ASN LYS | n/a | n/a |
7 | 1B5J | Kd = 37 nM | LYS GLN LYS | n/a | n/a |
8 | 2OLB | Kd = 2900 nM | LYS LYS LYS | n/a | n/a |
9 | 1B6H | Kd = 0.015 uM | LYS NVA LYS | n/a | n/a |
10 | 1B7H | Kd = 0.0095 uM | LYS NLE LYS | n/a | n/a |
11 | 1B0H | Kd = 0.2 uM | LYS ALN LYS | n/a | n/a |
12 | 1B46 | Kd = 5200 nM | LYS PRO LYS | n/a | n/a |
13 | 1B4Z | Kd = 5900 nM | LYS ASP LYS | n/a | n/a |
14 | 1B3L | Kd = 1300 nM | LYS GLY LYS | n/a | n/a |
15 | 1QKA | Kd = 1200 nM | LYS ARG LYS | n/a | n/a |
16 | 1B3F | Kd = 130 nM | LYS HIS LYS | n/a | n/a |
17 | 1B52 | Kd = 76 nM | LYS THR LYS | n/a | n/a |
18 | 1OLA | - | VAL LYS PRO GLY | n/a | n/a |
19 | 1B2H | Kd = 29 uM | LYS ORN LYS | n/a | n/a |
20 | 1B4H | Kd = 3.44 uM | LYS DAB LYS | n/a | n/a |
21 | 1B9J | Kd = 1100 nM | LYS LEU LYS | n/a | n/a |
22 | 1OLC | Kd = 2.7 uM | LYS LYS LYS ALA | n/a | n/a |
23 | 1B3H | Kd = 0.62 uM | LYS ALC LYS | n/a | n/a |
24 | 1JEU | Kd = 150 nM | LYS GLU LYS | n/a | n/a |
25 | 2RKM | Ki = 125 uM | LYS LYS | n/a | n/a |
26 | 1B51 | Kd = 43 nM | LYS SER LYS | n/a | n/a |
27 | 1B58 | Kd = 260 nM | LYS TYR LYS | n/a | n/a |
28 | 1JEV | Kd = 130 nM | LYS TRP LYS | n/a | n/a |
29 | 1QKB | Kd = 45 nM | LYS VAL LYS | n/a | n/a |
30 | 1B1H | Kd = 0.093 uM | LYS HPE LYS | n/a | n/a |
31 | 1B32 | Kd = 79 nM | LYS MET LYS | n/a | n/a |
32 | 1B05 | Kd = 75 nM | LYS CYS LYS | n/a | n/a |
33 | 6DQT | - | LEU GLY GLY | n/a | n/a |
34 | 6DTG | - | TYR LEU GLY ALA ASN GLY | n/a | n/a |
35 | 6DQR | - | MET GLY GLY | n/a | n/a |
36 | 6DTH | - | ARG PRO PRO GLY PHE | n/a | n/a |
37 | 6DQQ | - | ALA ALA ALA ALA | n/a | n/a |
38 | 6DQU | - | GLY ILE ILE ASN THR LEU | n/a | n/a |
39 | 6DTF | - | LYS LYS LYS | n/a | n/a |
40 | 3TCG | Kd = 1.36 uM | LYS GLY GLU | n/a | n/a |
41 | 2Z23 | - | LYS LYS LYS | n/a | n/a |
No: | Ligand | ECFP6 Tc | MDL keys Tc |
---|---|---|---|
1 | LYS ALA LYS | 1 | 1 |
2 | LYS LEU LYS | 0.666667 | 0.925 |
3 | API DAL C0O | 0.654545 | 0.864865 |
4 | LYS VAL LYS | 0.649123 | 0.948718 |
5 | LYS LYS LYS | 0.648148 | 0.972973 |
6 | LYS DPP LYS | 0.636364 | 0.9 |
7 | LYS NVA LYS | 0.631579 | 0.948718 |
8 | LYS THR LYS | 0.627119 | 0.880952 |
9 | LYS DAB LYS | 0.625 | 0.923077 |
10 | LYS NLE LYS | 0.62069 | 0.925 |
11 | LYS ILE LYS | 0.616667 | 0.925 |
12 | LYS CYS LYS | 0.614035 | 0.923077 |
13 | LYS SER LYS | 0.614035 | 0.857143 |
14 | LYS ASP LYS | 0.603448 | 0.923077 |
15 | LYS LYS LYS ALA | 0.59322 | 1 |
16 | LYS ASN LYS | 0.59322 | 0.878049 |
17 | LYS GLU LYS | 0.583333 | 0.947368 |
18 | LYS MET LYS | 0.580645 | 0.880952 |
19 | LYS GLN LYS | 0.57377 | 0.947368 |
20 | ALA LYS | 0.566038 | 0.918919 |
21 | LYS ORN LYS | 0.555556 | 0.923077 |
22 | LYS GLY LYS | 0.55 | 0.923077 |
23 | LYS ALA SER VAL GLY | 0.542857 | 0.8 |
24 | VAL LYS | 0.535714 | 0.871795 |
25 | LYS ARG LYS | 0.522388 | 0.837209 |
26 | LEU LYS | 0.508475 | 0.85 |
27 | LYS ALC LYS | 0.507246 | 0.9 |
28 | MET ALA ARG | 0.5 | 0.714286 |
29 | LYS TYR LYS | 0.492958 | 0.8 |
30 | LYS HPE LYS | 0.492958 | 0.9 |
31 | LYS LYS | 0.491228 | 0.945946 |
32 | LYS ASN LEU | 0.484848 | 0.818182 |
33 | C0O DAL DAL | 0.482759 | 0.842105 |
34 | LYS HIS LYS | 0.479452 | 0.765957 |
35 | LYS THR LYS LEU LEU | 0.466667 | 0.822222 |
36 | DAS DLY | 0.465517 | 0.785714 |
37 | GLU ALA LYS PRO | 0.4625 | 0.74 |
38 | GLN LYS | 0.459016 | 0.921053 |
39 | ALA LYS ALA ALA | 0.454545 | 0.894737 |
40 | LYS ALN LYS | 0.448718 | 0.818182 |
41 | GLY THR LEU SER ASN ARG ALA SER LYS LEU | 0.434211 | 0.8 |
42 | LYS CYS VAL VAL MET | 0.428571 | 0.8 |
43 | LYS TRP LYS | 0.426829 | 0.75 |
44 | MET ALA ALA | 0.42623 | 0.744186 |
45 | PHE LEU ALA TYR LYS | 0.423913 | 0.72 |
46 | LYS LEU VAL VAL VAL ALA VAL GLY VAL | 0.418605 | 0.878049 |
47 | HIS GLU GLU LEU ALA LYS LEU | 0.417722 | 0.878049 |
48 | PHE ALA GLN | 0.416667 | 0.731707 |
49 | ARG ASP ARG ALA ALA LYS LEU | 0.409639 | 0.804348 |
50 | LYS SER ALA TPO THR THR VAL MET ASN PRO | 0.409091 | 0.648148 |
51 | LYS ALA THR LYS MLY | 0.405405 | 0.711538 |
52 | PHE LEU GLU LYS | 0.4 | 0.818182 |
53 | CYS ASP PTR ALA ASN PHE LYS | 0.4 | 0.818182 |
No: | Ligand | Similarity coefficient |
---|---|---|
1 | LYS PRO LYS | 0.8959 |
2 | LYS GLY GLU | 0.8761 |
This union binding pocket(no: 1) in the query (biounit: 1b7h.bio1) has 34 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |