Receptor
PDB id Resolution Class Description Source Keywords
1JH7 2.4 Å EC: 3.1.4.- SEMI-REDUCED INHIBITOR-BOUND CYCLIC NUCLEOTIDE PHOSPHODIESTE ARABIDOPSIS THALIANA ARABIDOPSIS THALIANA ADP-RIBOSE 1-prime -prime 2-prime -prime -CYCLIC PHOSPHATE RNA PROCESSING 2-prime 3-prime -CNUCLEOTIDE PHOSPHODIESTERASE 2-prime 3-prime -CYCLIC URIDINE VANADATEHYDROLASE
Ref.: CRYSTAL STRUCTURES OF THE SEMIREDUCED AND INHIBITOR FORMS OF CYCLIC NUCLEOTIDE PHOSPHODIESTERASE FROM ARABIDOPSIS THALIANA. J.BIOL.CHEM. V. 277 1419 2002
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 A:212;
A:213;
A:214;
A:215;
 Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
 submit data
96.063 O4 S [O-]S...
UVC A:201;
A:202;
 Valid;
Valid;
 none;
none;
 submit data
343.141 C9 H12 N2 O9 V C1=CN...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1JH7 2.4 Å EC: 3.1.4.- SEMI-REDUCED INHIBITOR-BOUND CYCLIC NUCLEOTIDE PHOSPHODIESTE ARABIDOPSIS THALIANA ARABIDOPSIS THALIANA ADP-RIBOSE 1-prime -prime 2-prime -prime -CYCLIC PHOSPHATE RNA PROCESSING 2-prime 3-prime -CNUCLEOTIDE PHOSPHODIESTERASE 2-prime 3-prime -CYCLIC URIDINE VANADATEHYDROLASE
Ref.: CRYSTAL STRUCTURES OF THE SEMIREDUCED AND INHIBITOR FORMS OF CYCLIC NUCLEOTIDE PHOSPHODIESTERASE FROM ARABIDOPSIS THALIANA. J.BIOL.CHEM. V. 277 1419 2002
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 13 families.
1 1JH7 - UVC C9 H12 N2 O9 V C1=CN(C(=O....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 12 families.
1 1JH7 - UVC C9 H12 N2 O9 V C1=CN(C(=O....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 1JH7 - UVC C9 H12 N2 O9 V C1=CN(C(=O....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: UVC; Similar ligands found: 13
No: Ligand ECFP6 Tc MDL keys Tc
1 UVC 1 1
2 URI 0.515625 0.782609
3 UA3 0.492958 0.882353
4 U3P 0.492958 0.882353
5 CJB 0.492537 0.742857
6 DKX 0.471429 0.722222
7 U2P 0.452055 0.869565
8 UMF 0.445946 0.830986
9 DUR 0.42029 0.736111
10 U5P 0.407895 0.842857
11 U 0.407895 0.842857
12 N3E 0.407407 0.710526
13 U4S 0.402597 0.706667
Similar Ligands (3D)
Ligand no: 1; Ligand: UVC; Similar ligands found: 14
No: Ligand Similarity coefficient
1 C2P 0.9657
2 C3P 0.9006
3 T3P 0.9003
4 UM3 0.8992
5 CTN 0.8913
6 5UD 0.8771
7 F01 0.8705
8 DFL 0.8664
9 7M5 0.8662
10 4OZ 0.8630
11 7M2 0.8628
12 KL2 0.8613
13 DFV 0.8567
14 3AM 0.8541
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1jh7.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1jh7.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1jh7.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1jh7.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 1jh7.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 1jh7.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 1jh7.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 1jh7.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 1jh7.bio2) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 1jh7.bio2) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 1jh7.bio2) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 1jh7.bio2) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 13; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 13) in the query (biounit: 1jh7.bio2) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 14; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 14) in the query (biounit: 1jh7.bio2) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 15; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 15) in the query (biounit: 1jh7.bio3) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 16; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 16) in the query (biounit: 1jh7.bio3) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 17; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 17) in the query (biounit: 1jh7.bio3) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 18; Query (leader) PDB : 1JH7; Ligand: UVC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 18) in the query (biounit: 1jh7.bio3) has 7 residues
No: Leader PDB Ligand Sequence Similarity
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