Receptor
PDB id Resolution Class Description Source Keywords
1KRP 2.2 Å EC: 2.7.7.7 DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX ESCHERICHIA COLI COMPLEX (HYDROLASE/DNA) EXONUCLEASE PHOSPHOROTHIOATE TRANSFERASE/DNA COMPLEX
Ref.: STRUCTURAL PRINCIPLES FOR THE INHIBITION OF THE 3'-5' EXONUCLEASE ACTIVITY OF ESCHERICHIA COLI DNA POLYMERASE I BY PHOSPHOROTHIOATES. J.MOL.BIOL. V. 277 363 1998
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
DT DT PST B:1001;
Valid;
none;
submit data
n/a n/a
ZN A:1;
A:3;
A:320;
B:2;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1KRP 2.2 Å EC: 2.7.7.7 DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX ESCHERICHIA COLI COMPLEX (HYDROLASE/DNA) EXONUCLEASE PHOSPHOROTHIOATE TRANSFERASE/DNA COMPLEX
Ref.: STRUCTURAL PRINCIPLES FOR THE INHIBITION OF THE 3'-5' EXONUCLEASE ACTIVITY OF ESCHERICHIA COLI DNA POLYMERASE I BY PHOSPHOROTHIOATES. J.MOL.BIOL. V. 277 363 1998
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 21 families.
1 1KRP - DT DT PST n/a n/a
2 1KSP - DT DT PST n/a n/a
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 20 families.
1 1KRP - DT DT PST n/a n/a
2 1KSP - DT DT PST n/a n/a
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 20 families.
1 1KRP - DT DT PST n/a n/a
2 1KSP - DT DT PST n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: DT DT PST; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: DT DT PST; Similar ligands found: 1
No: Ligand Similarity coefficient
1 DT DT PST 1.0000
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1KRP; Ligand: DT DT PST; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1krp.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
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