Receptor
PDB id Resolution Class Description Source Keywords
1LES 1.9 Å NON-ENZYME: BINDING LENTIL LECTIN COMPLEXED WITH SUCROSE LENS CULINARIS PROTEIN-SUGAR INTERACTIONS LECTIN
Ref.: NMR, MOLECULAR MODELING, AND CRYSTALLOGRAPHIC STUDIES OF LENTIL LECTIN-SUCROSE INTERACTION. J.BIOL.CHEM. V. 270 25619 1995
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:203;
C:201;
Part of Protein;
Part of Protein;
none;
none;
submit data
40.078 Ca [Ca+2...
GLC FRU A:205;
C:207;
Valid;
Valid;
none;
none;
submit data
342.297 n/a O(C1(...
MN A:204;
C:202;
Part of Protein;
Part of Protein;
none;
none;
submit data
54.938 Mn [Mn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1LES 1.9 Å NON-ENZYME: BINDING LENTIL LECTIN COMPLEXED WITH SUCROSE LENS CULINARIS PROTEIN-SUGAR INTERACTIONS LECTIN
Ref.: NMR, MOLECULAR MODELING, AND CRYSTALLOGRAPHIC STUDIES OF LENTIL LECTIN-SUCROSE INTERACTION. J.BIOL.CHEM. V. 270 25619 1995
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 1LES - GLC FRU n/a n/a
70% Homology Family (9)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 1LES - GLC FRU n/a n/a
2 1BQP - MAN C6 H12 O6 C([C@@H]1[....
3 1OFS - SUC C12 H22 O11 C([C@@H]1[....
4 1HKD - GYP C7 H14 O6 CO[C@@H]1[....
5 1LOA - GYP C7 H14 O6 CO[C@@H]1[....
6 1LOC - MDP DAL ZGL n/a n/a
7 1LOB - MMA C7 H14 O6 CO[C@@H]1[....
8 1LOG - MAN BMA NAG n/a n/a
9 1LOD - MUR C9 H17 N O7 C[C@H](C(=....
50% Homology Family (9)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 1LES - GLC FRU n/a n/a
2 1BQP - MAN C6 H12 O6 C([C@@H]1[....
3 1OFS - SUC C12 H22 O11 C([C@@H]1[....
4 1HKD - GYP C7 H14 O6 CO[C@@H]1[....
5 1LOA - GYP C7 H14 O6 CO[C@@H]1[....
6 1LOC - MDP DAL ZGL n/a n/a
7 1LOB - MMA C7 H14 O6 CO[C@@H]1[....
8 1LOG - MAN BMA NAG n/a n/a
9 1LOD - MUR C9 H17 N O7 C[C@H](C(=....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GLC FRU; Similar ligands found: 19
No: Ligand ECFP6 Tc MDL keys Tc
1 GLC FRU 1 1
2 SWE 1 1
3 SUC 1 1
4 FRU GLC GLA 0.736842 0.972973
5 RAF 0.736842 0.972973
6 SUP 0.701754 0.8
7 GLC FRU FRU 0.684211 0.972973
8 DQR 0.666667 0.972973
9 FNY 0.612903 0.972973
10 NYT 0.612903 0.972973
11 20S 0.534247 0.8
12 SUC GLA 0.5 0.921053
13 AGR 0.467532 0.782609
14 TRE 0.42 0.864865
15 MMA 0.411765 0.789474
16 MBG 0.411765 0.789474
17 AMG 0.411765 0.789474
18 GYP 0.411765 0.789474
19 GLC GLC FRU 0.4 0.947368
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1LES; Ligand: GLC FRU; Similar sites found: 111
This union binding pocket(no: 1) in the query (biounit: 1les.bio1) has 10 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2NU5 NAG 0.00000009077 0.61933 None
2 2GUC MAN 0.00000008001 0.60814 None
3 2HYR BGC GLC 0.0000001566 0.59607 None
4 2GUD MAN 0.00000009295 0.56367 None
5 2NUO BGC 0.0000002356 0.55302 None
6 3LL2 MAN MAN MAN MAN MAN MAN MAN MAN 0.00001532 0.54835 None
7 2GUD BMA 0.000001568 0.51511 None
8 2HYQ MAN MAN 0.00001413 0.50106 None
9 2GUE NAG 0.000002732 0.4866 None
10 4FG8 ATP 0.01071 0.42946 None
11 3HGM ATP 0.02849 0.40615 None
12 4J5R A1R 0.0286 0.4006 None
13 3X1Z GNP 0.009756 0.41752 1.1976
14 2JG1 ANP 0.004995 0.43666 2.76243
15 4JEJ 1GP 0.0365 0.40362 2.76243
16 5EB4 FAD 0.04991 0.40166 3.31492
17 3BY8 MLT 0.003447 0.41085 3.52113
18 2DUR MAN MAN 0.0000003836 0.63517 3.84615
19 4QTB 38Z 0.02349 0.42312 3.8674
20 1BXG HCI 0.006666 0.42121 4.41989
21 5A5W GUO 0.0315 0.40856 4.41989
22 1J49 NAD 0.01049 0.43768 4.97238
23 2FWP ICR 0.01095 0.40633 4.97238
24 4UP3 FAD 0.01918 0.43901 5.52486
25 1DQX BMP 0.01408 0.40917 5.76923
26 4FBL SPD 0.01634 0.40355 5.76923
27 2FLI DX5 0.01758 0.40139 5.76923
28 1WY7 SAH 0.01708 0.40842 6.07735
29 1V59 FAD 0.02879 0.42238 6.48536
30 5WDR GNP 0.01261 0.40764 7.01754
31 3ZBQ GDP 0.005176 0.43177 7.18232
32 2VAP GDP 0.02 0.41783 7.18232
33 3TA2 AKG 0.01644 0.40507 7.62712
34 1LTH NAD 0.002113 0.47233 7.69231
35 1JXZ BCA 0.01594 0.42359 7.69231
36 1YJQ NAP 0.01836 0.4218 7.69231
37 1F74 NAY 0.009097 0.41638 7.69231
38 1NZY BCA 0.02059 0.41465 7.69231
39 3S5W NAP 0.01578 0.40758 7.69231
40 4AT0 FAD 0.01372 0.43726 7.73481
41 3GDN FAD 0.02075 0.42741 7.73481
42 3GDN HBX 0.02618 0.42741 7.73481
43 1FEC FAD 0.04061 0.42178 7.73481
44 3CR3 ADP 0.01217 0.41571 8.26446
45 4YNU FAD 0.03192 0.41589 8.83978
46 4YNU LGC 0.03572 0.41589 8.83978
47 3VY6 BGC BGC 0.0000001203 0.56349 9.21986
48 3R51 MMA 0.0001849 0.45818 9.375
49 4RPL FAD 0.04774 0.4069 9.39227
50 4ZGS NAD 0.003733 0.45826 9.61539
51 5KDS A2G THR ALA PRO GLY GLY NAG SIA 0.0135 0.41544 9.61539
52 5ODQ FAD 0.04435 0.41218 9.61539
53 2A92 NAI 0.02929 0.4045 9.61539
54 3LAD FAD 0.03874 0.41553 9.94475
55 1LBZ FBP 0.01759 0.41262 9.94475
56 3AFN NAP 0.03208 0.41849 10.4972
57 4L3L 5FI 0.01044 0.42576 11.5385
58 3QVP FAD 0.04357 0.41711 11.5385
59 1FWV SGA MAG FUC 0.006372 0.41614 11.5385
60 4R74 F6P 0.01193 0.40315 11.5385
61 4CZG ADP 0.03142 0.40665 11.7816
62 4CZG QH3 0.03265 0.40665 11.7816
63 4JBI NDP 0.0312 0.40274 12.1547
64 4ZNO SUC 0.000008332 0.51536 13.4615
65 3IES M24 0.006741 0.45284 13.4615
66 4YUW 4JU 0.02964 0.44627 13.4615
67 4YUW S4M 0.02924 0.44627 13.4615
68 2PT9 2MH 0.03075 0.4374 13.4615
69 2PT9 S4M 0.02184 0.4374 13.4615
70 2D1S SLU 0.008703 0.43687 13.4615
71 5ITZ GTP 0.01385 0.42029 13.4615
72 3UCL NAP 0.04032 0.42003 13.4615
73 5EYP GTP 0.016 0.41894 13.4615
74 4LNU GTP 0.01743 0.41599 13.4615
75 1I8T FAD 0.02416 0.41098 13.4615
76 1ELI PYC 0.0406 0.40683 13.4615
77 1GJW GLC 0.009056 0.4023 13.4615
78 1NNS ASP 0.008018 0.40756 13.8122
79 2OD9 A1R NCA 0.02647 0.40626 14.3646
80 5TQZ GLC 0.000003659 0.56022 15.3846
81 1LYX PGA 0.006634 0.42955 15.3846
82 1MV8 NAD 0.01653 0.42116 15.3846
83 3CTY FAD 0.03516 0.41666 15.3846
84 1RP0 AHZ 0.03218 0.41289 15.3846
85 3ACL 3F1 0.01671 0.41285 15.3846
86 4HKP TKW 0.01262 0.40896 15.3846
87 2CXS F6P 0.01773 0.40535 15.3846
88 2GAG NAD 0.04679 0.40265 15.3846
89 3CB2 GDP 0.005475 0.42792 16.0221
90 4IOK ADP 0.04633 0.41509 16.0221
91 2IVF MGD 0.02791 0.4265 17.1271
92 1OFD FMN 0.03217 0.41226 17.1271
93 1OFD AKG 0.02974 0.41226 17.1271
94 4Q4K FMN 0.004948 0.45156 17.3077
95 1DXY NAD 0.006935 0.44489 17.3077
96 2V7B BEZ 0.003526 0.42415 17.3077
97 1P9B HDA 0.002411 0.40041 18.232
98 1I36 NAP 0.005556 0.45271 19.2308
99 4FZV SAM 0.01376 0.42285 19.2308
100 4MO2 FDA 0.03476 0.4033 19.2308
101 2Z6J FMN 0.02119 0.41311 21.1538
102 3C6K MTA 0.01483 0.423 23.0769
103 3C6K SPD 0.01483 0.423 23.0769
104 3ZKI WZV 0.02115 0.40326 23.0769
105 4YRY FAD 0.04645 0.41008 25
106 4N02 FNR 0.02174 0.40714 25.9669
107 4Z24 FAD 0.04977 0.40203 26.9231
108 3F8K COA 0.03287 0.4019 26.9231
109 4C3Y ANB 0.03988 0.40556 28.8462
110 3WYF GTP 0.02095 0.40556 28.8462
111 3AD8 NAD 0.03488 0.41144 38.4615
Pocket No.: 2; Query (leader) PDB : 1LES; Ligand: GLC FRU; Similar sites found: 43
This union binding pocket(no: 2) in the query (biounit: 1les.bio1) has 10 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5L4S NAP 0.03298 0.42175 3.31492
2 5L4S 6KX 0.03298 0.42175 3.31492
3 5U8U FAD 0.03757 0.41934 3.31492
4 3OID NDP 0.04125 0.41328 3.84615
5 2VHW NAI 0.0186 0.43012 3.8674
6 2CUL FAD 0.0385 0.40528 3.8674
7 1WPQ NAD 0.01121 0.43036 4.41989
8 1VG8 GNP 0.03505 0.40569 4.41989
9 2JK0 ASP 0.006612 0.40558 4.41989
10 1D4D FAD 0.03984 0.40187 4.41989
11 5XDT ZI7 0.01937 0.40581 5.76923
12 5ESO TDP 0.02379 0.42822 6.07735
13 5ESO ISC 0.02379 0.42822 6.07735
14 1V59 NAD 0.02244 0.4026 6.48536
15 3TKA SAM 0.009856 0.41583 6.62983
16 2CUN 3PG 0.003574 0.41854 7.18232
17 3F8D FAD 0.04775 0.41908 7.73481
18 1UAD GNP 0.02051 0.41636 8
19 1SB8 NAD 0.0481 0.40876 9.61539
20 2HQM FAD 0.04758 0.40252 9.61539
21 3NT6 FAD 0.04521 0.40194 9.61539
22 5BSH PRO 0.02517 0.4222 9.94475
23 4HDO GNP 0.01558 0.40758 11.0497
24 1QAN SAH 0.02416 0.4043 11.5385
25 5J7X FAD 0.03614 0.40068 11.5385
26 1EBG PAH 0.01928 0.40978 11.6022
27 4PKI ATP 0.03387 0.40208 12.1547
28 3SJH ATP 0.03489 0.4019 12.963
29 3UCL CYH 0.03897 0.41873 13.4615
30 3UCL FAD 0.03897 0.41873 13.4615
31 4LNU GDP 0.02388 0.40358 13.4615
32 1P0F NAP 0.04697 0.40028 13.4615
33 4EHU ANP 0.03157 0.40538 15.3846
34 4PLG NAI 0.01229 0.43768 17.3077
35 5KZD RCJ 0.01287 0.40654 17.3077
36 3L4S 3PG 0.04074 0.40438 17.3077
37 3L4S NAD 0.03914 0.40438 17.3077
38 1B57 PGH 0.02352 0.40165 19.2308
39 2C5L GTP 0.02884 0.41185 19.6581
40 2F5Z FAD 0.04163 0.4228 21.1538
41 2HMT NAI 0.03403 0.40198 21.1538
42 2YVJ FAD 0.03798 0.41175 23.0769
43 1TB3 FMN 0.02687 0.40405 32.6923
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