Receptor
PDB id Resolution Class Description Source Keywords
1LN1 2.4 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF HUMAN PHOSPHATIDYLCHOLINE TRANSFER PROTEIN IN COMPLEX WITH DILINOLEOYLPHOSPHATIDYLCHOLINE HOMO SAPIENS START DOMAIN LIPID BINDING PROTEIN
Ref.: STRUCTURE OF HUMAN PHOSPHATIDYLCHOLINE TRANSFER PROTEIN IN COMPLEX WITH ITS LIGAND. NAT.STRUCT.BIOL. V. 9 507 2002
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
DLP A:2313;
Valid;
none;
submit data
782.082 C44 H80 N O8 P CCCCC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1LN1 2.4 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF HUMAN PHOSPHATIDYLCHOLINE TRANSFER PROTEIN IN COMPLEX WITH DILINOLEOYLPHOSPHATIDYLCHOLINE HOMO SAPIENS START DOMAIN LIPID BINDING PROTEIN
Ref.: STRUCTURE OF HUMAN PHOSPHATIDYLCHOLINE TRANSFER PROTEIN IN COMPLEX WITH ITS LIGAND. NAT.STRUCT.BIOL. V. 9 507 2002
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 1LN1 - DLP C44 H80 N O8 P CCCCCC=C/C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 1LN1 - DLP C44 H80 N O8 P CCCCCC=C/C....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 1LN1 - DLP C44 H80 N O8 P CCCCCC=C/C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: DLP; Similar ligands found: 66
No: Ligand ECFP6 Tc MDL keys Tc
1 DLP 1 1
2 L9R 0.860759 1
3 PC1 0.769231 0.98
4 MC3 0.769231 0.98
5 PCF 0.769231 0.98
6 PSC 0.758621 0.925926
7 PCW 0.659091 0.925926
8 GP7 0.623656 0.728814
9 3PE 0.619048 0.796296
10 P3A 0.602151 0.696429
11 PEK 0.602151 0.728814
12 EPH 0.58 0.728814
13 HGP 0.574713 0.907407
14 PC7 0.574713 0.907407
15 6PL 0.574713 0.907407
16 LIO 0.574713 0.907407
17 HGX 0.574713 0.907407
18 PLD 0.574713 0.907407
19 PIE 0.568421 0.661017
20 CDL 0.55814 0.730769
21 L9Q 0.554348 0.728814
22 LOP 0.554348 0.728814
23 XP5 0.551724 0.907407
24 T7X 0.534653 0.622951
25 ZPE 0.526316 0.728814
26 PGW 0.515789 0.666667
27 PX2 0.511905 0.716981
28 PGV 0.510417 0.666667
29 DR9 0.510417 0.666667
30 PCK 0.510204 0.859649
31 AGA 0.505495 0.678571
32 P6L 0.505155 0.666667
33 OZ2 0.5 0.666667
34 B7N 0.494949 0.622951
35 42H 0.494737 0.892857
36 3PC 0.494505 0.96
37 7PH 0.482353 0.672727
38 LPP 0.482353 0.672727
39 6PH 0.482353 0.672727
40 3PH 0.482353 0.672727
41 7P9 0.476744 0.672727
42 PEH 0.472527 0.711864
43 PTY 0.472527 0.711864
44 8PE 0.472527 0.711864
45 PEV 0.472527 0.711864
46 PEF 0.472527 0.711864
47 9PE 0.467391 0.711864
48 PD7 0.458824 0.672727
49 PEE 0.451613 0.728814
50 PC5 0.450549 0.87037
51 CD4 0.445652 0.672727
52 PFS 0.43617 0.98
53 PGT 0.43617 0.649123
54 M7U 0.43617 0.672727
55 LHG 0.43617 0.649123
56 PIZ 0.435644 0.606557
57 44E 0.435294 0.672727
58 OPC 0.432692 0.909091
59 8ND 0.431818 0.618182
60 P5S 0.427083 0.694915
61 IP9 0.425743 0.606557
62 PII 0.418367 0.606557
63 LAP 0.414894 0.875
64 LP3 0.414894 0.875
65 LPC 0.414894 0.875
66 CN3 0.41 0.672727
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1LN1; Ligand: DLP; Similar sites found: 97
This union binding pocket(no: 1) in the query (biounit: 1ln1.bio1) has 33 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5N53 8NB 0.01478 0.43078 None
2 4WG0 CHD 0.0199 0.41878 None
3 2Y2B AH0 0.04011 0.40583 1.60428
4 4MZU TYD 0.006645 0.44993 1.86916
5 2VWA PTY 0.02331 0.41155 1.9802
6 4ZYB 4SQ 0.0316 0.40046 2.23881
7 4U0W 16G 0.002301 0.44422 2.33645
8 4J25 OGA 0.01368 0.43132 2.33645
9 4V3I ASP LEU THR ARG PRO 0.03844 0.40741 2.33645
10 4HN1 TYD 0.01321 0.41572 2.48756
11 5FPX GLY SER SER HIS HIS HIS HIS HIS 0.003643 0.43122 2.65487
12 3JUQ AJD 0.009811 0.40252 2.7027
13 1Z03 OCH 0.02059 0.42177 2.80374
14 4RZB NFQ 0.01989 0.41831 2.80374
15 1OJJ GLC GAL 0.02186 0.41615 2.80374
16 3B00 16A 0.01856 0.41586 2.80374
17 4KBA 1QM 0.03598 0.40472 2.80374
18 4O1Z MXM 0.0123 0.40109 2.80374
19 4H6B 10X 0.0296 0.4019 3.07692
20 3L1N PLM 0.04873 0.40146 3.09278
21 1H0A I3P 0.03713 0.40835 3.16456
22 3PNA CMP 0.04181 0.40127 3.24675
23 5L9B AKG 0.02042 0.41373 3.27103
24 3HQR OGA 0.01762 0.4132 3.27103
25 4Y8D 49J 0.01242 0.4101 3.27103
26 5UC9 MYR 0.04029 0.40743 3.27103
27 5V4R MGT 0.0185 0.4282 3.7037
28 4L4J NAG NAG BMA MAN NAG 0.01251 0.44522 3.73832
29 2WA4 069 0.0128 0.42014 3.73832
30 1NQ7 HIS LYS ILE LEU HIS ARG LEU LEU GLN GLU 0.02433 0.4137 3.73832
31 3BRN SRO 0.04755 0.40396 3.82166
32 4XBT 3ZQ 0.0246 0.40593 3.87097
33 1I06 TZL 0.03668 0.40819 3.88889
34 1QY1 PRZ 0.005519 0.41638 4.02299
35 5V3D FCN 0.03178 0.41118 4.13793
36 5L6G XYP 0.02264 0.42047 4.20561
37 4FFG 0U8 0.03669 0.40818 4.20561
38 5L9V OGA 0.01614 0.41897 4.6729
39 1PZL MYR 0.01923 0.4012 4.6729
40 4IAW LIZ 0.01309 0.42361 4.78723
41 3KYQ DPV 0.01944 0.4231 5.02513
42 2FR3 REA 0.00372 0.4308 5.10949
43 1I0B PEL 0.007261 0.43246 5.14019
44 2OVW CBI 0.02215 0.42005 5.14019
45 3TDC 0EU 0.0000222 0.5571 5.24934
46 1RL4 BL5 0.007343 0.4821 5.31915
47 5X7Q GLC GLC GLC GLC GLC 0.003404 0.47119 5.60748
48 3B9Z CO2 0.02729 0.43102 5.60748
49 2XIB DFU 0.02656 0.41694 5.60748
50 3JZ0 CLY 0.02937 0.41036 5.60748
51 4JH6 FCN 0.01735 0.42143 5.7971
52 1Y9Q MED 0.03 0.41444 6.25
53 2HZQ STR 0.04801 0.40308 6.32184
54 1OI6 TMP 0.03242 0.41176 6.34146
55 4ZSI 4R1 0.002984 0.44296 6.43275
56 4ZSI GLP 0.01581 0.40847 6.43275
57 1P1M MET 0.0008696 0.44779 6.54206
58 5OCA 9QZ 0.006849 0.42644 6.54206
59 5JSP DQY 0.02127 0.4231 6.96517
60 5C9J DAO 0.02679 0.40767 7.07071
61 5L2J 70E 0.002343 0.43156 7.14286
62 5L2J 6UL 0.002995 0.42588 7.14286
63 3L9R L9R 0.001774 0.40452 7.14286
64 2OVD DAO 0.04624 0.40415 7.14286
65 3THR C2F 0.004281 0.43551 7.47664
66 3A8H TAY 0.004013 0.46208 7.72947
67 1J78 OLA 0.01213 0.44728 7.94393
68 5BVB DOG 0.04473 0.405 8.33333
69 2YKL NLD 0.02662 0.40421 8.33333
70 5KEW 6SB 0.001022 0.49483 8.51064
71 5CHR 4NC 0.01694 0.42812 8.75912
72 3TL1 JRO 0.02028 0.42212 8.80503
73 1U0A BGC BGC BGC BGC 0.00358 0.4392 8.8785
74 5C3R HMU 0.008744 0.41722 8.8785
75 5C3R AKG 0.008744 0.41722 8.8785
76 4GBD MCF 0.009338 0.40635 8.8785
77 4EJ1 FOL 0.007752 0.42324 8.95522
78 4EVQ PHB 0.01917 0.41137 9.81308
79 3OCP CMP 0.01926 0.41503 10.0719
80 4ZGM 32M 0.01998 0.42373 10.6557
81 3QRC SCR 0.004666 0.42966 10.828
82 5CX6 CDP 0.01698 0.42937 11.215
83 4TV1 36M 0.04519 0.40325 11.6822
84 4LWU 20U 0.02349 0.40349 11.7647
85 4YMJ 4EJ 0.01928 0.42538 13.0841
86 3VQ2 LP4 LP5 MYR DAO 0.004329 0.404 13.1944
87 5MWE TCE 0.01682 0.42649 13.5802
88 3AJH BL3 0.01595 0.40828 14.486
89 1OW4 2AN 0.02862 0.40263 15.5039
90 1U6R IOM 0.0284 0.41574 16.3551
91 4UCC ZKW 0.03264 0.4117 16.3551
92 3KFF XBT 0.003687 0.46181 16.6667
93 3KFF ZBT 0.003687 0.46181 16.6667
94 3BY9 SIN 0.04924 0.40256 18.6916
95 4OFG PCG 0.01832 0.41236 20.1389
96 3GGF GVD 0.0252 0.40199 23.3645
97 3QUG GIX 0.01999 0.41819 25.3968
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