Receptor
PDB id Resolution Class Description Source Keywords
1M15 1.2 Å EC: 2.7.3.3 TRANSITION STATE STRUCTURE OF ARGININE KINASE LIMULUS POLYPHEMUS ARGININE KINASE CREATINE KINASE PHOSPHAGEN KINASE TRANSITION STATE ANALOG ADENOSINE TRIPHOSPHATE TRANSFERAS
Ref.: REFINEMENT OF THE ARGININE KINASE TRANSITION-STATE ANALOGUE COMPLEX AT 1.2 A RESOLUTION: MECHANISTIC INSIGHTS. ACTA CRYSTALLOGR.,SECT.D V. 58 2009 2002
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ADP A:400;
 Valid;
 none;
 submit data
427.201 C10 H15 N5 O10 P2 c1nc(...
ARG A:403;
 Valid;
 none;
 submit data
175.209 C6 H15 N4 O2 C(C[C...
MG A:408;
 Invalid;
 none;
 submit data
24.305 Mg [Mg+2...
NO3 A:405;
A:500;
 Invalid;
Invalid;
 none;
none;
 submit data
62.005 N O3 [N+](...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1M15 1.2 Å EC: 2.7.3.3 TRANSITION STATE STRUCTURE OF ARGININE KINASE LIMULUS POLYPHEMUS ARGININE KINASE CREATINE KINASE PHOSPHAGEN KINASE TRANSITION STATE ANALOG ADENOSINE TRIPHOSPHATE TRANSFERAS
Ref.: REFINEMENT OF THE ARGININE KINASE TRANSITION-STATE ANALOGUE COMPLEX AT 1.2 A RESOLUTION: MECHANISTIC INSIGHTS. ACTA CRYSTALLOGR.,SECT.D V. 58 2009 2002
Members (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 1BG0 - DAR C6 H15 N4 O2 C(C[C@H](C....
2 1M15 - ARG C6 H15 N4 O2 C(C[C@@H](....
3 5J99 - ARG C6 H15 N4 O2 C(C[C@@H](....
4 1P52 - DAR C6 H15 N4 O2 C(C[C@H](C....
5 1RL9 - IOM C4 H11 N3 O2 CN(CC(=O)O....
6 4GW2 - ORN C5 H12 N2 O2 C(C[C@@H](....
7 1SD0 - ARG C6 H15 N4 O2 C(C[C@@H](....
8 4GW0 - ILO C7 H15 N3 O2 CC(=N)NCCC....
9 5J9A - ARG C6 H15 N4 O2 C(C[C@@H](....
10 4GVY - CIR C6 H13 N3 O3 C(C[C@@H](....
70% Homology Family (11)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 4BHL - ARG C6 H15 N4 O2 C(C[C@@H](....
2 1BG0 - DAR C6 H15 N4 O2 C(C[C@H](C....
3 1M15 - ARG C6 H15 N4 O2 C(C[C@@H](....
4 5J99 - ARG C6 H15 N4 O2 C(C[C@@H](....
5 1P52 - DAR C6 H15 N4 O2 C(C[C@H](C....
6 1RL9 - IOM C4 H11 N3 O2 CN(CC(=O)O....
7 4GW2 - ORN C5 H12 N2 O2 C(C[C@@H](....
8 1SD0 - ARG C6 H15 N4 O2 C(C[C@@H](....
9 4GW0 - ILO C7 H15 N3 O2 CC(=N)NCCC....
10 5J9A - ARG C6 H15 N4 O2 C(C[C@@H](....
11 4GVY - CIR C6 H13 N3 O3 C(C[C@@H](....
50% Homology Family (16)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3JQ3 - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
2 1VRP - IOM C4 H11 N3 O2 CN(CC(=O)O....
3 3B6R - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
4 3DRB - ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
5 4BHL - ARG C6 H15 N4 O2 C(C[C@@H](....
6 1U6R - IOM C4 H11 N3 O2 CN(CC(=O)O....
7 1BG0 - DAR C6 H15 N4 O2 C(C[C@H](C....
8 1M15 - ARG C6 H15 N4 O2 C(C[C@@H](....
9 5J99 - ARG C6 H15 N4 O2 C(C[C@@H](....
10 1P52 - DAR C6 H15 N4 O2 C(C[C@H](C....
11 1RL9 - IOM C4 H11 N3 O2 CN(CC(=O)O....
12 4GW2 - ORN C5 H12 N2 O2 C(C[C@@H](....
13 1SD0 - ARG C6 H15 N4 O2 C(C[C@@H](....
14 4GW0 - ILO C7 H15 N3 O2 CC(=N)NCCC....
15 5J9A - ARG C6 H15 N4 O2 C(C[C@@H](....
16 4GVY - CIR C6 H13 N3 O3 C(C[C@@H](....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ADP; Similar ligands found: 435
No: Ligand ECFP6 Tc MDL keys Tc
1 ADP 1 1
2 ATP 0.9 1
3 A2D 0.895522 0.971831
4 AQP 0.887324 1
5 5FA 0.887324 1
6 AP5 0.884058 0.971831
7 B4P 0.884058 0.971831
8 BA3 0.869565 0.971831
9 AN2 0.84507 0.985915
10 M33 0.833333 0.958333
11 ACQ 0.826667 0.972222
12 A 0.823529 0.971429
13 AMP 0.823529 0.971429
14 ACP 0.821918 0.972222
15 AR6 0.810811 0.971831
16 APR 0.810811 0.971831
17 ANP 0.802632 0.972222
18 AD9 0.8 0.972222
19 AGS 0.8 0.945946
20 SAP 0.8 0.945946
21 ADX 0.783784 0.873418
22 CA0 0.783784 0.945205
23 TAT 0.779221 0.958904
24 AMP MG 0.774648 0.891892
25 50T 0.773333 0.958333
26 ABM 0.763889 0.917808
27 APC 0.763158 0.958904
28 PRX 0.763158 0.893333
29 ATF 0.759494 0.958904
30 A22 0.753086 0.985915
31 A12 0.743243 0.958904
32 AP2 0.743243 0.958904
33 ADP MG 0.736842 0.905405
34 SRA 0.736111 0.918919
35 ADQ 0.73494 0.945205
36 25L 0.732558 0.985915
37 ADP BEF 0.727273 0.881579
38 BEF ADP 0.727273 0.881579
39 5AL 0.725 0.931507
40 2A5 0.717949 0.918919
41 A1R 0.714286 0.907895
42 AU1 0.714286 0.972222
43 ADP PO3 0.708861 0.943662
44 PAP 0.708861 0.985714
45 ATR 0.708861 0.971429
46 SRP 0.707317 0.906667
47 7D3 0.706667 0.905405
48 25A 0.702381 0.971831
49 ATP MG 0.7 0.905405
50 OAD 0.697674 0.945205
51 RBY 0.6875 0.932432
52 ADV 0.6875 0.932432
53 00A 0.686047 0.883117
54 5SV 0.682353 0.848101
55 8QN 0.682353 0.931507
56 OOB 0.682353 0.931507
57 3OD 0.681818 0.945205
58 BIS 0.681818 0.933333
59 ADP ALF 0.674699 0.87013
60 ALF ADP 0.674699 0.87013
61 AMO 0.674419 0.932432
62 4AD 0.674419 0.92
63 PAJ 0.674419 0.884615
64 GAP 0.670732 0.893333
65 MAP 0.670588 0.945946
66 DLL 0.666667 0.931507
67 ANP MG 0.666667 0.894737
68 VO4 ADP 0.666667 0.931507
69 AHX 0.666667 0.896104
70 ADP VO4 0.666667 0.931507
71 PTJ 0.662921 0.896104
72 3UK 0.659091 0.918919
73 SON 0.658228 0.932432
74 LAD 0.651685 0.860759
75 WAQ 0.651685 0.883117
76 PR8 0.651685 0.85
77 ITT 0.65 0.943662
78 7D4 0.65 0.905405
79 G5P 0.648936 0.921053
80 RAB 0.647059 0.84507
81 ADN 0.647059 0.84507
82 XYA 0.647059 0.84507
83 TXA 0.644444 0.932432
84 1ZZ 0.644444 0.839506
85 ME8 0.644444 0.839506
86 NB8 0.644444 0.896104
87 FYA 0.644444 0.905405
88 6AD 0.642857 0.909091
89 ADP BMA 0.640449 0.918919
90 G3A 0.638298 0.921053
91 DAL AMP 0.632184 0.905405
92 AFH 0.631579 0.884615
93 9SN 0.630435 0.871795
94 GTA 0.625 0.886076
95 YAP 0.623656 0.894737
96 FA5 0.623656 0.906667
97 UP5 0.622449 0.92
98 XAH 0.617021 0.839506
99 AV2 0.616279 0.917808
100 AOC 0.615385 0.821918
101 48N 0.612245 0.896104
102 4UV 0.610526 0.894737
103 TXD 0.606061 0.907895
104 DND 0.606061 0.932432
105 NAX 0.606061 0.873418
106 NXX 0.606061 0.932432
107 NAI 0.606061 0.907895
108 6V0 0.606061 0.896104
109 5N5 0.605634 0.819444
110 5AS 0.604938 0.77907
111 A4P 0.60396 0.843373
112 DAT 0.60241 0.905405
113 A2R 0.602273 0.985915
114 TXE 0.6 0.907895
115 OMR 0.6 0.851852
116 4UU 0.597938 0.894737
117 A A 0.597826 0.944444
118 A4D 0.597222 0.819444
119 5CD 0.597222 0.805556
120 AP0 0.594059 0.896104
121 4TC 0.594059 0.896104
122 A3P 0.592593 0.971429
123 139 0.592233 0.873418
124 T5A 0.592233 0.841463
125 7D5 0.592105 0.878378
126 ATP A A A 0.589474 0.930556
127 LAQ 0.585859 0.839506
128 MYR AMP 0.585106 0.817073
129 YLP 0.58 0.819277
130 UPA 0.578431 0.907895
131 7DD 0.578313 0.985714
132 ADJ 0.576923 0.851852
133 3AM 0.576923 0.929577
134 COD 0.575472 0.811765
135 NAD 0.575472 0.931507
136 3AT 0.574713 0.971831
137 JB6 0.574468 0.883117
138 4UW 0.574257 0.860759
139 EP4 0.573333 0.753247
140 A2P 0.573171 0.957143
141 CNA 0.571429 0.932432
142 TYM 0.568627 0.906667
143 PPS 0.568182 0.873418
144 TYR AMP 0.56701 0.881579
145 DTA 0.565789 0.786667
146 M2T 0.565789 0.734177
147 AR6 AR6 0.565657 0.917808
148 A3D 0.564815 0.918919
149 3DH 0.564103 0.773333
150 G5A 0.563218 0.77907
151 YLB 0.563107 0.819277
152 YLC 0.563107 0.839506
153 AMP DBH 0.561224 0.893333
154 MTA 0.558442 0.773333
155 DTP 0.556818 0.905405
156 AHZ 0.554455 0.817073
157 NA7 0.553191 0.958904
158 IOT 0.552381 0.831325
159 7MD 0.55 0.8625
160 ZAS 0.55 0.766234
161 IMO 0.548781 0.929577
162 YLA 0.54717 0.819277
163 NAE 0.544643 0.894737
164 TAD 0.544554 0.884615
165 A5A 0.544444 0.807229
166 2AM 0.544304 0.943662
167 TSB 0.543478 0.819277
168 6RE 0.54321 0.759494
169 AYB 0.542056 0.809524
170 NAQ 0.539823 0.871795
171 V3L 0.539326 0.971831
172 ARG AMP 0.539216 0.829268
173 AF3 ADP 3PG 0.538462 0.8375
174 SSA 0.538462 0.8
175 LA8 ALF 3PG 0.538462 0.8375
176 ALF ADP 3PG 0.538462 0.8375
177 ZID 0.535088 0.918919
178 LPA AMP 0.533981 0.817073
179 54H 0.532609 0.788235
180 52H 0.532609 0.77907
181 VMS 0.532609 0.788235
182 BTX 0.53211 0.841463
183 J7C 0.53012 0.769231
184 A3N 0.53012 0.786667
185 5X8 0.528736 0.763158
186 BT5 0.527273 0.831325
187 5CA 0.526882 0.8
188 53H 0.526882 0.77907
189 ARU 0.526316 0.860759
190 EAD 0.525862 0.873418
191 RGT 0.525253 0.958904
192 OVE 0.52439 0.905405
193 S4M 0.52381 0.666667
194 7DT 0.522727 0.985714
195 GDP 0.522222 0.92
196 DDS 0.522222 0.878378
197 AVV 0.521277 0.896104
198 NDE 0.521008 0.932432
199 7MC 0.518868 0.841463
200 DSH 0.518072 0.725
201 MAO 0.517647 0.759036
202 LSS 0.515789 0.761364
203 DSZ 0.515789 0.8
204 NSS 0.515789 0.8
205 P5A 0.515464 0.744444
206 DZD 0.513514 0.884615
207 NVA LMS 0.510417 0.761364
208 12D 0.509615 0.785714
209 NAD IBO 0.509091 0.87013
210 M24 0.508772 0.85
211 YLY 0.508772 0.809524
212 P1H 0.508333 0.851852
213 5AD 0.506849 0.746479
214 GJV 0.505882 0.75
215 LEU LMS 0.505155 0.761364
216 G A A A 0.504505 0.871795
217 4TA 0.504505 0.807229
218 NAJ PZO 0.504425 0.848101
219 KAA 0.5 0.752809
220 NDC 0.5 0.871795
221 7D7 0.5 0.743243
222 71V 0.5 0.907895
223 A3G 0.5 0.8
224 128 0.5 0.776471
225 GSU 0.5 0.77907
226 N0B 0.495726 0.819277
227 NJP 0.495495 0.945946
228 ODP 0.495495 0.909091
229 2SA 0.494624 0.932432
230 6C6 0.494505 0.881579
231 SFG 0.494382 0.75
232 0WD 0.491071 0.921053
233 YSA 0.490196 0.77907
234 PO4 PO4 A A A A PO4 0.489796 0.902778
235 6IA 0.48913 0.8375
236 SAM 0.48913 0.690476
237 A7D 0.488636 0.776316
238 6FA 0.488 0.841463
239 FB0 0.487805 0.804598
240 NAJ PYZ 0.487179 0.85
241 IDP 0.483516 0.918919
242 A5D 0.483516 0.786667
243 SA8 0.483516 0.707317
244 MHZ 0.483146 0.697674
245 PGS 0.483146 0.883117
246 D5M 0.482353 0.878378
247 DA 0.482353 0.878378
248 NEC 0.482353 0.746667
249 NIA 0.481928 0.822785
250 Y3J 0.480519 0.726027
251 FAD 0.480315 0.851852
252 FAS 0.480315 0.851852
253 FDA 0.48 0.833333
254 N6P 0.479592 0.915493
255 GGZ 0.479167 0.825
256 SAH 0.478261 0.74359
257 SAI 0.478261 0.734177
258 NPW 0.477477 0.886076
259 NDP 0.477477 0.921053
260 AAM 0.476744 0.971429
261 AMZ 0.47561 0.916667
262 C2R 0.47561 0.90411
263 A A A 0.474747 0.905405
264 GTP 0.473684 0.92
265 U A G G 0.473684 0.883117
266 SMM 0.473684 0.686047
267 TXP 0.473214 0.921053
268 NZQ 0.473214 0.909091
269 A3S 0.47191 0.810811
270 AMP NAD 0.470588 0.881579
271 SFD 0.46875 0.734043
272 AIR 0.468354 0.901408
273 AAT 0.468085 0.707317
274 EEM 0.468085 0.690476
275 Z5A 0.466667 0.77907
276 7C5 0.466667 0.818182
277 J7V 0.466667 0.833333
278 62F 0.465649 0.8625
279 FAY 0.462121 0.8625
280 ETB 0.461538 0.833333
281 DCA 0.461538 0.823529
282 A3T 0.461538 0.821918
283 A6D 0.46 0.722892
284 A U 0.459459 0.87013
285 6K6 0.459184 0.930556
286 GEK 0.459184 0.7375
287 RFL 0.458647 0.821429
288 S7M 0.458333 0.690476
289 NAP 0.458333 0.945205
290 4YB 0.457944 0.761364
291 WSA 0.454545 0.788235
292 TAP 0.454545 0.907895
293 FNK 0.454545 0.804598
294 COA 0.453782 0.823529
295 0T1 0.453782 0.823529
296 101 0.453488 0.878378
297 XNP 0.452174 0.873418
298 NA0 0.45082 0.932432
299 7RP 0.448276 0.928571
300 GP3 0.446809 0.921053
301 TM1 0.446602 0.77381
302 APU 0.446429 0.894737
303 PUA 0.445378 0.884615
304 V1N 0.443396 0.917808
305 7RA 0.443182 0.957747
306 30N 0.442623 0.752688
307 CAO 0.442623 0.795455
308 AMX 0.442623 0.833333
309 COS 0.442623 0.804598
310 ACK 0.44186 0.861111
311 QQY 0.44186 0.815789
312 649 0.441441 0.744444
313 0UM 0.44 0.698795
314 NHD 0.439655 0.905405
315 CMX 0.439024 0.823529
316 SCO 0.439024 0.823529
317 GCP 0.438776 0.896104
318 8BR 0.438202 0.906667
319 GNH 0.4375 0.907895
320 3AD 0.4375 0.805556
321 62X 0.435644 0.666667
322 ACO 0.435484 0.795455
323 FCX 0.435484 0.795455
324 FAM 0.435484 0.804598
325 GNP 0.434343 0.896104
326 NMX 0.433071 0.76087
327 MGP 0.43299 0.884615
328 PLP AAD 0.432203 0.741573
329 26A 0.432099 0.763158
330 HAX 0.432 0.804598
331 K15 0.431373 0.682353
332 DG1 0.430894 0.921053
333 1DG 0.430894 0.921053
334 QQX 0.430233 0.805195
335 2VA 0.430108 0.8
336 S8M 0.43 0.759494
337 2MC 0.429688 0.769231
338 3KK 0.428571 0.804598
339 6G0 0.428571 0.884615
340 FYN 0.428571 0.823529
341 P5F 0.428571 0.823529
342 NAD BBN 0.428571 0.841463
343 U G A 0.427481 0.839506
344 AS 0.426966 0.833333
345 FAI 0.426966 0.916667
346 RMB 0.426966 0.873239
347 1RB 0.425287 0.885714
348 MCD 0.425197 0.804598
349 OXK 0.425197 0.804598
350 COK 0.425197 0.804598
351 CA6 0.425197 0.729167
352 SOP 0.425197 0.804598
353 G1R 0.424242 0.907895
354 CC5 0.423077 0.816901
355 SXZ 0.423077 0.710843
356 F2N 0.422535 0.813953
357 NAD CJ3 0.422222 0.811765
358 ANZ 0.422018 0.8
359 CMC 0.421875 0.804598
360 CO6 0.421875 0.804598
361 1VU 0.421875 0.795455
362 ZDA 0.421053 0.864865
363 GDD 0.420561 0.884615
364 GKE 0.420561 0.884615
365 GDC 0.420561 0.884615
366 NFD 0.420168 0.883117
367 GSP 0.42 0.873418
368 D3Y 0.42 0.789474
369 MC4 0.419847 0.76087
370 3L1 0.419753 0.773333
371 3D1 0.419753 0.773333
372 FA9 0.41958 0.864198
373 5GP 0.419355 0.906667
374 G 0.419355 0.906667
375 KB1 0.419048 0.698795
376 SCD 0.418605 0.823529
377 CAJ 0.418605 0.804598
378 2BA 0.417582 0.915493
379 CMP 0.417582 0.901408
380 SO8 0.416667 0.789474
381 N01 0.416667 0.905405
382 VRT 0.416667 0.769231
383 3HC 0.415385 0.813953
384 A1S 0.415385 0.804598
385 BCO 0.415385 0.804598
386 IVC 0.415385 0.813953
387 MLC 0.415385 0.804598
388 1HE 0.415385 0.786517
389 NMN AMP PO4 0.415254 0.87013
390 2FA 0.414634 0.813333
391 MGO 0.414141 0.860759
392 3NZ 0.413462 0.782051
393 MCA 0.412214 0.795455
394 CAA 0.412214 0.813953
395 YE1 0.412214 0.813953
396 COO 0.412214 0.804598
397 GAV 0.411765 0.884615
398 P2P 0.411111 0.902778
399 JLN 0.411111 0.890411
400 ZZB 0.410256 0.77381
401 CNV FAD 0.410072 0.793103
402 SCA 0.409091 0.804598
403 RP1 0.409091 0.842105
404 103 0.409091 0.837838
405 2CP 0.409091 0.795455
406 SP1 0.409091 0.842105
407 PAX 0.408 0.829268
408 FAD NBT 0.407143 0.75
409 NVA 2AD 0.40625 0.74359
410 COW 0.406015 0.795455
411 BYC 0.406015 0.804598
412 2KQ 0.406015 0.786517
413 COF 0.406015 0.786517
414 3CP 0.406015 0.804598
415 IRC 0.406015 0.813953
416 1GZ 0.406015 0.795455
417 HGG 0.406015 0.804598
418 CA8 0.406015 0.729167
419 G2P 0.405941 0.884615
420 SLU 0.404959 0.770115
421 U A C C 0.404959 0.858974
422 RBZ 0.404494 0.849315
423 1CZ 0.404412 0.795455
424 BCA 0.402985 0.795455
425 FAQ 0.402985 0.804598
426 4CA 0.402985 0.795455
427 MTP 0.402439 0.730769
428 8OD 0.402062 0.945205
429 CO7 0.401515 0.804598
430 DAL FAD PER 0.401408 0.809524
431 G2R 0.4 0.884615
432 HXC 0.4 0.786517
433 ENQ 0.4 0.916667
434 GMV 0.4 0.896104
435 GRA 0.4 0.804598
Ligand no: 2; Ligand: ARG; Similar ligands found: 39
No: Ligand ECFP6 Tc MDL keys Tc
1 DAR 1 1
2 ARG 1 1
3 CIR 0.735294 0.763158
4 AAR 0.705882 0.783784
5 ILO 0.615385 0.783784
6 3AR 0.595238 0.891892
7 HAR 0.585366 0.780488
8 VUR 0.585366 0.810811
9 4JK 0.585366 0.789474
10 VIO 0.581395 0.769231
11 WT2 0.571429 0.805556
12 DA2 0.55814 0.744186
13 3KJ 0.545455 0.680851
14 2YH 0.545455 0.65
15 1KJ 0.533333 0.744186
16 JM2 0.533333 0.731707
17 2YJ 0.521739 0.619048
18 NRG 0.521739 0.622642
19 RPI 0.521739 0.64
20 API 0.515152 0.611111
21 LN6 0.510638 0.725
22 JM7 0.5 0.731707
23 HRG 0.5 0.941176
24 D20 0.489796 0.744186
25 AS1 0.489796 0.8
26 2KJ 0.489796 0.727273
27 ORN 0.472222 0.757576
28 JM6 0.470588 0.697674
29 JM4 0.470588 0.697674
30 JM8 0.470588 0.714286
31 MLZ 0.463415 0.65
32 JM5 0.461538 0.714286
33 DLY 0.447368 0.735294
34 DAB 0.441176 0.685714
35 LYS 0.435897 0.764706
36 0TF 0.428571 0.619048
37 2YG 0.42 0.619048
38 PG3 0.416667 0.756757
39 6CL 0.414634 0.638889
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1M15; Ligand: ADP; Similar sites found: 141
This union binding pocket(no: 1) in the query (biounit: 1m15.bio1) has 34 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4BTV RB3 0.03181 0.41424 1.16279
2 5J75 6GQ 0.01001 0.42277 1.51515
3 4FF8 14S 0.034 0.40341 1.54799
4 2PNC CLU 0.006747 0.45557 1.68067
5 2QHS OCA 0.01795 0.41773 1.68776
6 5H2U 1N1 0.01249 0.41114 1.87266
7 4RYV ZEA 0.02367 0.41154 1.93548
8 5KJW 53C 0.0004497 0.51508 1.96078
9 4FFG 0U8 0.004374 0.457 1.96078
10 3GD9 GLC BGC BGC BGC 0.004693 0.44307 1.96078
11 4XWM CBK 0.04833 0.40262 1.96078
12 4JX1 CAH 0.04112 0.40034 1.96078
13 4ZTD ALA GLY ALA GLY ALA 0.01456 0.43086 1.97628
14 3VY6 BGC BGC 0.02843 0.40728 2.12766
15 3T4L ZEA 0.002389 0.44474 2.22222
16 5X7Q ACR 0.01641 0.41626 2.2409
17 2QK4 ATP 0.04155 0.40247 2.2409
18 5TSH ANP 0.03831 0.40072 2.2409
19 3ANY 2A3 0.02726 0.41577 2.28137
20 4O9S 2RY 0.007392 0.40075 2.32558
21 2VDF OCT 0.004453 0.45086 2.37154
22 5LUN OGA 0.02325 0.41194 2.55682
23 1N9L FMN 0.004036 0.43043 2.75229
24 5KEW 6SB 0.01283 0.43563 2.77778
25 5T8U LPA 0.03205 0.40124 2.77778
26 3CBC DBS 0.001513 0.49212 2.80112
27 4KBA 1QM 0.005598 0.40305 3.02115
28 5W4W 9WG 0.008373 0.40114 3.02115
29 1W8S FBP 0.03258 0.40088 3.04183
30 4XCB AKG 0.01285 0.43394 3.06513
31 3ZJX BOG 0.01117 0.44027 3.11419
32 1WW5 SGA BGC 0.01675 0.42878 3.125
33 5DYO FLU 0.001289 0.48956 3.30189
34 5TQZ GLC 0.0295 0.41815 3.33333
35 1OF4 BMA BMA BMA BMA BMA 0.02608 0.41851 3.35196
36 1OFL NGK GCD 0.01481 0.42281 3.36134
37 4U98 ACP 0.01123 0.41672 3.36134
38 1GPM AMP 0.03864 0.4123 3.36134
39 2Z5Y HRM 0.03306 0.40775 3.64146
40 1WS4 AMG 0.02277 0.41159 3.7594
41 1WS5 MMA 0.02676 0.40384 3.7594
42 1KUJ MMA 0.02646 0.4035 3.7594
43 1UGY GLA BGC 0.02874 0.40294 3.7594
44 3QRC SCR 0.001306 0.46556 3.82166
45 2F7A BEZ 0.03483 0.40456 3.87931
46 1KGI T4A 0.003868 0.41809 3.93701
47 5HV7 RBL 0.02175 0.40645 4.20168
48 2WKQ FMN 0.002619 0.43902 4.21687
49 3P7N FMN 0.001261 0.45353 4.26357
50 5H9Y BGC BGC BGC BGC 0.01212 0.4187 4.27928
51 3DOO SKM 0.03895 0.41191 4.33213
52 3M3E GAL A2G NPO 0.01219 0.43089 4.34783
53 4FK7 P34 0.03541 0.4162 4.36681
54 5D9G GLU ASN LEU TYR PHE GLN 0.007762 0.44089 4.47154
55 3OYW TDG 0.02002 0.42354 4.47761
56 1GZW GAL BGC 0.0297 0.40812 4.47761
57 1W6O LAT 0.03196 0.40638 4.47761
58 5H9Q TD2 0.003097 0.44887 4.51613
59 1GUI BGC BGC BGC BGC BGC BGC 0.01384 0.43219 4.51613
60 2RDE C2E 0.0139 0.4195 4.78088
61 1VKF CIT 0.005786 0.45233 4.78723
62 5D3X 4IP 0.02183 0.40734 4.79042
63 2G30 ALA ALA PHE 0.000005208 0.62584 5.03876
64 4ITH RCM 0.009448 0.4073 5.10204
65 1GZF NIR 0.03385 0.41116 5.21327
66 1MFI FHC 0.01594 0.4317 5.26316
67 1ZNY GDP 0.02028 0.42324 5.31401
68 3NZ1 3NY 0.005802 0.45261 5.36398
69 3WV6 GAL BGC 0.006485 0.44895 5.40541
70 3WV6 GAL GLC 0.004079 0.43564 5.40541
71 4K55 H6P 0.00002876 0.59543 5.64516
72 4R38 RBF 0.0004783 0.46844 5.71429
73 5VNF VAL THR SER VAL VAL 0.01519 0.42559 5.73248
74 5HA0 LTD 0.006846 0.40211 5.76923
75 4IPM TCB 0.04797 0.40289 5.88235
76 5TVF CGQ 0.03881 0.40405 5.96491
77 2P7Q GG6 0.02831 0.41132 6.01504
78 4EES FMN 0.003904 0.42757 6.08696
79 3CM2 X23 0.04772 0.40301 6.15385
80 4YZ5 SLT 0.03485 0.40882 6.16247
81 5NCF 8T5 0.009948 0.43991 6.19469
82 3SAO DBH 0.00002747 0.6067 6.25
83 3T50 FMN 0.004164 0.42981 6.25
84 1XNK XS2 0.02948 0.40308 6.63265
85 4LOO SB4 0.007624 0.42118 6.72269
86 1XK5 TPG 0.042 0.40513 6.86275
87 1MAI I3P 0.02856 0.42332 6.87023
88 5HWV MBN 0.009688 0.44053 6.92308
89 2Z6D FMN 0.008359 0.41594 6.92308
90 5MRH Q9Z 0.006481 0.445 7.0028
91 2QL9 CIT 0.0358 0.41028 7.2165
92 3H0L ADP 0.006141 0.44622 7.44681
93 3VV1 GAL FUC 0.03078 0.40636 7.5
94 1F52 ADP 0.0112 0.4242 7.56302
95 2PR5 FMN 0.003297 0.43445 7.57576
96 2YMZ LAT 0.005077 0.43064 7.69231
97 3OQJ 3CX 0.03067 0.40573 7.7821
98 5NFB 8VT 0.004593 0.46219 7.95455
99 4IAW LIZ 0.01789 0.4178 7.97872
100 2ZHL NAG GAL GAL NAG 0.03257 0.40089 8.10811
101 2D6M LBT 0.009454 0.44199 8.1761
102 5H9P TD2 0.004641 0.4577 8.86076
103 3LTW HLZ 0.0148 0.43383 8.92857
104 2YKL NLD 0.003507 0.44938 9.25926
105 5GLT BGC GAL NAG GAL 0.005149 0.44546 9.50704
106 4DSU BZI 0.001336 0.49446 9.52381
107 2V0U FMN 0.003177 0.43518 9.58904
108 5EFW FMN 0.003348 0.43414 9.65517
109 5DJU FMN 0.005007 0.42272 9.65517
110 4K30 NLG 0.034 0.40711 10
111 2TPI ILE VAL 0.009812 0.41605 10.0437
112 5E89 TD2 0.01289 0.41385 10.0719
113 2XG5 EC5 0.00781 0.43728 10.0917
114 2XG5 EC2 0.00781 0.43728 10.0917
115 5AIG VPR 0.04126 0.40264 10.4
116 1SLT NDG GAL 0.03066 0.40405 10.4478
117 2WZ5 MET 0.002247 0.43227 10.4575
118 1UYY BGC BGC 0.006995 0.44814 10.687
119 4C2W ANP 0.01135 0.43906 10.7527
120 4M1U A2G MBG 0.02603 0.40242 11.4286
121 3WG3 A2G GAL NAG FUC 0.0408 0.40289 11.7978
122 2CM4 RCL 0.0109 0.40456 12.6667
123 3HCH RSM 0.03765 0.40882 13.0137
124 1BC5 ACE ASN TRP GLU THR PHE 0.02966 0.41025 13.3829
125 1GT4 UNA 0.001009 0.46667 13.8365
126 5F6U 5VK 0.00355 0.45169 14.0127
127 4XMF HSM 0.01567 0.4233 14.6739
128 2GUD MAN 0.01058 0.44738 14.7541
129 2GUC MAN 0.01199 0.44454 14.7541
130 2HYQ MAN MAN 0.01204 0.44241 14.7541
131 2HYR BGC GLC 0.01385 0.43706 14.7541
132 2NU5 NAG 0.01816 0.42637 14.7541
133 2NUO BGC 0.04138 0.40311 14.7541
134 5DKK FMN 0.002594 0.43921 15.1724
135 2Z6C FMN 0.008176 0.41638 15.5039
136 1QKQ MAN 0.0003307 0.51224 19.0141
137 3IWD M2T 0.03135 0.41297 20.9677
138 1Y7P RIP 0.007819 0.41226 21.9731
139 4WUJ FMN 0.003176 0.43519 23.8095
140 5DJT FMN 0.003178 0.43518 29.5082
141 2FKA BEF 0.02716 0.4152 33.3333
Pocket No.: 2; Query (leader) PDB : 1M15; Ligand: ARG; Similar sites found: 141
This union binding pocket(no: 2) in the query (biounit: 1m15.bio1) has 34 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4BTV RB3 0.03181 0.41424 1.16279
2 5J75 6GQ 0.01001 0.42277 1.51515
3 4FF8 14S 0.034 0.40341 1.54799
4 2PNC CLU 0.006747 0.45557 1.68067
5 2QHS OCA 0.01795 0.41773 1.68776
6 5H2U 1N1 0.01249 0.41114 1.87266
7 4RYV ZEA 0.02367 0.41154 1.93548
8 5KJW 53C 0.0004497 0.51508 1.96078
9 4FFG 0U8 0.004374 0.457 1.96078
10 3GD9 GLC BGC BGC BGC 0.004693 0.44307 1.96078
11 4XWM CBK 0.04833 0.40262 1.96078
12 4JX1 CAH 0.04112 0.40034 1.96078
13 4ZTD ALA GLY ALA GLY ALA 0.01456 0.43086 1.97628
14 3VY6 BGC BGC 0.02843 0.40728 2.12766
15 3T4L ZEA 0.002389 0.44474 2.22222
16 5X7Q ACR 0.01641 0.41626 2.2409
17 2QK4 ATP 0.04155 0.40247 2.2409
18 5TSH ANP 0.03831 0.40072 2.2409
19 3ANY 2A3 0.02726 0.41577 2.28137
20 4O9S 2RY 0.007392 0.40075 2.32558
21 2VDF OCT 0.004453 0.45086 2.37154
22 5LUN OGA 0.02325 0.41194 2.55682
23 1N9L FMN 0.004036 0.43043 2.75229
24 5KEW 6SB 0.01283 0.43563 2.77778
25 5T8U LPA 0.03205 0.40124 2.77778
26 3CBC DBS 0.001513 0.49212 2.80112
27 4KBA 1QM 0.005598 0.40305 3.02115
28 5W4W 9WG 0.008373 0.40114 3.02115
29 1W8S FBP 0.03258 0.40088 3.04183
30 4XCB AKG 0.01285 0.43394 3.06513
31 3ZJX BOG 0.01117 0.44027 3.11419
32 1WW5 SGA BGC 0.01675 0.42878 3.125
33 5DYO FLU 0.001289 0.48956 3.30189
34 5TQZ GLC 0.0295 0.41815 3.33333
35 1OF4 BMA BMA BMA BMA BMA 0.02608 0.41851 3.35196
36 1OFL NGK GCD 0.01481 0.42281 3.36134
37 4U98 ACP 0.01123 0.41672 3.36134
38 1GPM AMP 0.03864 0.4123 3.36134
39 2Z5Y HRM 0.03306 0.40775 3.64146
40 1WS4 AMG 0.02277 0.41159 3.7594
41 1WS5 MMA 0.02676 0.40384 3.7594
42 1KUJ MMA 0.02646 0.4035 3.7594
43 1UGY GLA BGC 0.02874 0.40294 3.7594
44 3QRC SCR 0.001306 0.46556 3.82166
45 2F7A BEZ 0.03483 0.40456 3.87931
46 1KGI T4A 0.003868 0.41809 3.93701
47 5HV7 RBL 0.02175 0.40645 4.20168
48 2WKQ FMN 0.002619 0.43902 4.21687
49 3P7N FMN 0.001261 0.45353 4.26357
50 5H9Y BGC BGC BGC BGC 0.01212 0.4187 4.27928
51 3DOO SKM 0.03895 0.41191 4.33213
52 3M3E GAL A2G NPO 0.01219 0.43089 4.34783
53 4FK7 P34 0.03541 0.4162 4.36681
54 5D9G GLU ASN LEU TYR PHE GLN 0.007762 0.44089 4.47154
55 3OYW TDG 0.02002 0.42354 4.47761
56 1GZW GAL BGC 0.0297 0.40812 4.47761
57 1W6O LAT 0.03196 0.40638 4.47761
58 5H9Q TD2 0.003097 0.44887 4.51613
59 1GUI BGC BGC BGC BGC BGC BGC 0.01384 0.43219 4.51613
60 2RDE C2E 0.0139 0.4195 4.78088
61 1VKF CIT 0.005786 0.45233 4.78723
62 5D3X 4IP 0.02183 0.40734 4.79042
63 2G30 ALA ALA PHE 0.000005208 0.62584 5.03876
64 4ITH RCM 0.009448 0.4073 5.10204
65 1GZF NIR 0.03385 0.41116 5.21327
66 1MFI FHC 0.01594 0.4317 5.26316
67 1ZNY GDP 0.02028 0.42324 5.31401
68 3NZ1 3NY 0.005802 0.45261 5.36398
69 3WV6 GAL BGC 0.006485 0.44895 5.40541
70 3WV6 GAL GLC 0.004079 0.43564 5.40541
71 4K55 H6P 0.00002876 0.59543 5.64516
72 4R38 RBF 0.0004783 0.46844 5.71429
73 5VNF VAL THR SER VAL VAL 0.01519 0.42559 5.73248
74 5HA0 LTD 0.006846 0.40211 5.76923
75 4IPM TCB 0.04797 0.40289 5.88235
76 5TVF CGQ 0.03881 0.40405 5.96491
77 2P7Q GG6 0.02831 0.41132 6.01504
78 4EES FMN 0.003904 0.42757 6.08696
79 3CM2 X23 0.04772 0.40301 6.15385
80 4YZ5 SLT 0.03485 0.40882 6.16247
81 5NCF 8T5 0.009948 0.43991 6.19469
82 3SAO DBH 0.00002747 0.6067 6.25
83 3T50 FMN 0.004164 0.42981 6.25
84 1XNK XS2 0.02948 0.40308 6.63265
85 4LOO SB4 0.007624 0.42118 6.72269
86 1XK5 TPG 0.042 0.40513 6.86275
87 1MAI I3P 0.02856 0.42332 6.87023
88 5HWV MBN 0.009688 0.44053 6.92308
89 2Z6D FMN 0.008359 0.41594 6.92308
90 5MRH Q9Z 0.006481 0.445 7.0028
91 2QL9 CIT 0.0358 0.41028 7.2165
92 3H0L ADP 0.006141 0.44622 7.44681
93 3VV1 GAL FUC 0.03078 0.40636 7.5
94 1F52 ADP 0.0112 0.4242 7.56302
95 2PR5 FMN 0.003297 0.43445 7.57576
96 2YMZ LAT 0.005077 0.43064 7.69231
97 3OQJ 3CX 0.03067 0.40573 7.7821
98 5NFB 8VT 0.004593 0.46219 7.95455
99 4IAW LIZ 0.01789 0.4178 7.97872
100 2ZHL NAG GAL GAL NAG 0.03257 0.40089 8.10811
101 2D6M LBT 0.009454 0.44199 8.1761
102 5H9P TD2 0.004641 0.4577 8.86076
103 3LTW HLZ 0.0148 0.43383 8.92857
104 2YKL NLD 0.003507 0.44938 9.25926
105 5GLT BGC GAL NAG GAL 0.005149 0.44546 9.50704
106 4DSU BZI 0.001336 0.49446 9.52381
107 2V0U FMN 0.003177 0.43518 9.58904
108 5EFW FMN 0.003348 0.43414 9.65517
109 5DJU FMN 0.005007 0.42272 9.65517
110 4K30 NLG 0.034 0.40711 10
111 2TPI ILE VAL 0.009812 0.41605 10.0437
112 5E89 TD2 0.01289 0.41385 10.0719
113 2XG5 EC5 0.00781 0.43728 10.0917
114 2XG5 EC2 0.00781 0.43728 10.0917
115 5AIG VPR 0.04126 0.40264 10.4
116 1SLT NDG GAL 0.03066 0.40405 10.4478
117 2WZ5 MET 0.002247 0.43227 10.4575
118 1UYY BGC BGC 0.006995 0.44814 10.687
119 4C2W ANP 0.01135 0.43906 10.7527
120 4M1U A2G MBG 0.02603 0.40242 11.4286
121 3WG3 A2G GAL NAG FUC 0.0408 0.40289 11.7978
122 2CM4 RCL 0.0109 0.40456 12.6667
123 3HCH RSM 0.03765 0.40882 13.0137
124 1BC5 ACE ASN TRP GLU THR PHE 0.02966 0.41025 13.3829
125 1GT4 UNA 0.001009 0.46667 13.8365
126 5F6U 5VK 0.00355 0.45169 14.0127
127 4XMF HSM 0.01567 0.4233 14.6739
128 2GUD MAN 0.01058 0.44738 14.7541
129 2GUC MAN 0.01199 0.44454 14.7541
130 2HYQ MAN MAN 0.01204 0.44241 14.7541
131 2HYR BGC GLC 0.01385 0.43706 14.7541
132 2NU5 NAG 0.01816 0.42637 14.7541
133 2NUO BGC 0.04138 0.40311 14.7541
134 5DKK FMN 0.002594 0.43921 15.1724
135 2Z6C FMN 0.008176 0.41638 15.5039
136 1QKQ MAN 0.0003307 0.51224 19.0141
137 3IWD M2T 0.03135 0.41297 20.9677
138 1Y7P RIP 0.007819 0.41226 21.9731
139 4WUJ FMN 0.003176 0.43519 23.8095
140 5DJT FMN 0.003178 0.43518 29.5082
141 2FKA BEF 0.02716 0.4152 33.3333
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