Receptor
PDB id Resolution Class Description Source Keywords
1M2O 2.5 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF THE SEC23-SAR1 COMPLEX SACCHAROMYCES CEREVISIAE ZINC-FINGER BETA BARREL VWA DOMAIN GELSOLIN DOMAIN PROTTRANSPORT-SIGNALING PROTEIN COMPLEX
Ref.: STRUCTURE OF THE SEC23/24-SAR1 PRE-BUDDING COMPLEX COPII VESICLE COAT NATURE V. 419 271 2002
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP B:5200;
D:7200;
Valid;
Valid;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG B:210;
D:210;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
ZN A:800;
C:800;
Part of Protein;
Part of Protein;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1M2O 2.5 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF THE SEC23-SAR1 COMPLEX SACCHAROMYCES CEREVISIAE ZINC-FINGER BETA BARREL VWA DOMAIN GELSOLIN DOMAIN PROTTRANSPORT-SIGNALING PROTEIN COMPLEX
Ref.: STRUCTURE OF THE SEC23/24-SAR1 PRE-BUDDING COMPLEX COPII VESICLE COAT NATURE V. 419 271 2002
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 199 families.
1 1M2O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 166 families.
1 1M2O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1M2O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1M2O; Ligand: GNP; Similar sites found: 493
This union binding pocket(no: 1) in the query (biounit: 1m2o.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1D2E GDP 0.00000001746 0.67404 2.01511
2 3MD0 GDP 0.000000006839 0.73698 2.10526
3 3FKQ ATP 0.0001589 0.48635 2.14477
4 4ZNL BEF ADP 0.0001229 0.40753 2.55474
5 3EZ2 ADP 0.0002439 0.50641 3.15789
6 1P4V GLY 0.02639 0.40786 3.15789
7 1SKQ GDP 0.000000000895 0.78172 3.21839
8 3BFV ADP 0.0000135 0.56211 3.32103
9 1NY5 ADP 0.002052 0.43624 3.35917
10 2XTN GTP 0.000003772 0.53519 3.4188
11 1JWY GDP 0.0000004928 0.6072 3.68421
12 1JWY ADP 0.00001774 0.54893 3.68421
13 2DPY ADP 0.000765 0.48741 3.68421
14 5FTB ANP 0.0003069 0.48367 3.68421
15 1G41 ADP 0.0005161 0.47304 3.68421
16 1Z6T ADP 0.0004684 0.46518 3.68421
17 2C9O ADP 0.0004055 0.45899 3.68421
18 1FNN ADP 0.0005488 0.45758 3.68421
19 5FHD ADP ALF 0.0004397 0.45747 3.68421
20 1DNP MHF 0.01859 0.41401 3.68421
21 1I0B PEL 0.02883 0.40975 3.68421
22 3PD6 KYN 0.0309 0.40534 3.68421
23 1QHG ATP 0.0132 0.40303 3.68421
24 4XGU ADP 0.0001371 0.48924 3.77358
25 3ZQ6 ADP ALF 0.00006575 0.46749 4.01235
26 1CR1 TTP 0.000393 0.42195 4.05405
27 1GOJ ADP 0.0000003836 0.68298 4.21053
28 2NCD ADP 0.00001663 0.58043 4.21053
29 1XP8 AGS 0.00006219 0.53647 4.21053
30 4E03 ADP 0.0001044 0.5118 4.21053
31 1FP6 ADP 0.0000648 0.50956 4.21053
32 5MZN ADP 0.002635 0.45947 4.21053
33 4IOK XPO 0.0006259 0.43921 4.21053
34 4IOK ADP 0.0006603 0.42406 4.21053
35 4A4Z ANP 0.001047 0.46876 4.29688
36 3RWO GDP 0.00000001281 0.62326 4.32432
37 1JJV ATP 0.00006685 0.5474 4.36893
38 2D2F ADP 0.00006802 0.5547 4.4
39 3WXM GTP 0.0000000001561 0.69985 4.73684
40 4LC1 GDP 0.0000001755 0.6553 4.73684
41 5KSP GDP 0.000000234 0.6396 4.73684
42 4TTQ ATP 0.0001291 0.51368 4.73684
43 2IS6 ADP 0.0005215 0.48372 4.73684
44 1YTM ATP 0.0001821 0.47402 4.73684
45 2GN2 C5P 0.01454 0.43139 4.73684
46 3BFX A3P 0.002628 0.42754 4.73684
47 5H56 ADP 0.001938 0.42218 4.73684
48 5H56 TYD 0.001938 0.42218 4.73684
49 1OS1 ATP 0.001004 0.41154 4.73684
50 1OS1 PYR 0.00115 0.40469 4.73684
51 4EBZ NAG NAG NAG NAG 0.02847 0.40139 4.73684
52 5J1J ANP 0.00002263 0.50285 4.91228
53 4GBM A3P 0.003782 0.41042 4.95356
54 2BEK ATP 0.0006986 0.44477 5.05837
55 2B8W ALF 5GP 0.000005504 0.52303 5.18293
56 1DAR GDP 0.0000000004777 0.78202 5.26316
57 1SVI GDP 0.000000005543 0.74161 5.26316
58 3LRE ADP 0.000001108 0.65466 5.26316
59 5FG3 GDP 0.0000000003638 0.55707 5.26316
60 4QM7 GTP 0.00003594 0.54111 5.26316
61 2C04 GCP 0.00001667 0.5305 5.26316
62 5LB3 ADP 0.0001913 0.51176 5.26316
63 2GDJ ANP 0.0003148 0.49455 5.26316
64 4WEI GLC GAL 0.00177 0.48159 5.26316
65 2OFW ADX 0.0001853 0.47546 5.26316
66 4FCW ADP 0.001332 0.45846 5.26316
67 4LJ9 ACP 0.002184 0.45297 5.26316
68 4YS0 ADP 0.001162 0.44738 5.26316
69 4PJ3 ANP 0.004704 0.42376 5.26316
70 1WRA PC 0.02734 0.41892 5.26316
71 4D81 ADP 0.0004565 0.40492 5.26316
72 3FYH ADP 0.005388 0.40105 5.26316
73 4P4T GDP 0.0000008917 0.58072 5.27778
74 1W5T ANP 0.003014 0.42129 5.33981
75 1W5T ADP 0.005355 0.41743 5.33981
76 4Q1A UDP 0.005592 0.46171 5.35714
77 4Q1A 2XZ 0.005592 0.46171 5.35714
78 1V8K ANP 0.000006771 0.57693 5.60976
79 2VVG ADP 0.0000007192 0.66555 5.71429
80 3DKP ADP 0.0006867 0.47781 5.71429
81 1KO8 6PG 0.0008678 0.4048 5.71429
82 2RCN GDP 0.0000000005467 0.77913 5.78947
83 5HCN GCP 0.00000002976 0.68279 5.78947
84 4LPS GDP 0.0000004862 0.62427 5.78947
85 1LVG ADP 0.000002866 0.61356 5.78947
86 2WHX ADP 0.00001677 0.58172 5.78947
87 5M04 GDP 0.0000000005634 0.55396 5.78947
88 3Q9L ATP 0.00003431 0.51637 5.78947
89 2JLR ANP 0.0001972 0.48728 5.78947
90 3VX3 ADP 0.0001384 0.484 5.78947
91 2VF7 ADP 0.0004297 0.48217 5.78947
92 1U0J ADP 0.001037 0.47456 5.78947
93 2FNA ADP 0.0003204 0.45912 5.78947
94 5GJC ATP 0.00006247 0.4081 5.78947
95 5G41 AP5 0.001938 0.43878 5.8296
96 4ZG4 VO4 ADP 0.000002196 0.51967 5.89005
97 4MKF AP5 0.0005384 0.4583 5.99078
98 4HSE ADP 0.0001623 0.50256 6.04534
99 4U5X GNP 0.000000008895 0.66905 6.17978
100 1X1R GDP 0.00000002963 0.59767 6.17978
101 3U6B GDP 0.000000001198 0.7753 6.31579
102 2BVN GNP 0.0000000002418 0.75968 6.31579
103 4G5G GDP 0.000000002756 0.74442 6.31579
104 1D8T GDP 0.000000003408 0.73987 6.31579
105 3U6K GDP 0.000000007437 0.72312 6.31579
106 5JBQ GDP 0.000000002772 0.54441 6.31579
107 2HCJ GDP 0.000000001454 0.54243 6.31579
108 1G3Q ADP 0.00003372 0.53548 6.31579
109 3ZFD ANP 0.0000007807 0.48927 6.31579
110 5I34 GDP 0.00001318 0.44331 6.31579
111 4V03 ADP 0.00004889 0.4293 6.31579
112 3QKT ANP 0.001865 0.41987 6.31579
113 5IRN ADP 0.0001864 0.41652 6.31579
114 3R7F CP 0.03116 0.40541 6.31579
115 1NJF AGS 0.0003517 0.43118 6.4
116 1NJF ADP 0.0002398 0.42538 6.4
117 1Y63 ADP 0.000007769 0.57398 6.52174
118 4CVN ADP 0.000007161 0.59288 6.56934
119 1F5N GNP 0.000008233 0.50232 6.58784
120 4GOX A3P 0.001586 0.42613 6.70927
121 4BQS ADP 0.00004444 0.53656 6.81818
122 4BQS K2Q 0.002449 0.42462 6.81818
123 2AWN ADP 0.000001035 0.66664 6.84211
124 3REF GDP 0.00000001069 0.64887 6.84211
125 4WZ6 ATP 0.00002505 0.57126 6.84211
126 4YDS ATP 0.00006414 0.54339 6.84211
127 3IO3 ADP 0.0002474 0.47286 6.84211
128 1IHU AF3 0.0001556 0.47242 6.84211
129 4IEE AGS 0.001404 0.4679 6.84211
130 1IHU ADP 0.000196 0.46388 6.84211
131 2IXE ATP 0.000782 0.44269 6.84211
132 3QXC ATP 0.001232 0.41849 6.84211
133 1RYH GNP 0.0000000018 0.73023 6.89655
134 3TK1 GDP 0.00000002212 0.72338 6.9697
135 1AQU A3P 0.009958 0.40523 7.07071
136 1BO4 COA 0.01122 0.41777 7.14286
137 1QF5 RPL 0.00824 0.44262 7.19258
138 2PL3 ADP 0.0003873 0.49623 7.20339
139 3IIJ ADP 0.00003846 0.53966 7.22222
140 1I4D GDP 0.00000001441 0.72059 7.29167
141 1E96 GTP 0.000000003734 0.64468 7.29167
142 4J0Q GDP 0.0000000008568 0.78268 7.36842
143 3WYA GDP 0.0000000008241 0.77032 7.36842
144 1KK1 GNP 0.000000003429 0.75217 7.36842
145 1T5C ADP 0.000002429 0.63703 7.36842
146 3E70 GDP 0.000002919 0.58673 7.36842
147 3FWY ADP 0.00001782 0.52919 7.36842
148 1G8S MET 0.02469 0.41023 7.36842
149 5M7P ADP 0.0006622 0.40803 7.36842
150 5UAO FAD 0.01093 0.40361 7.36842
151 3P4X ADP 0.00008116 0.40285 7.36842
152 5MVR ADP 0.00007788 0.40971 7.40741
153 1MH1 GNP 0.000000003364 0.64938 7.52688
154 1YRB GDP 0.00000002048 0.67085 7.63359
155 1NST A3P 0.006106 0.41485 7.69231
156 5HR5 ADP 0.0002478 0.41898 7.72128
157 1XKV ATP 0.0001188 0.5031 7.75047
158 4ZKD GDP 0.0000000005705 0.68038 7.89474
159 4RD0 GDP 0.0000000001069 0.67618 7.89474
160 3T34 GDP 0.000004891 0.5305 7.89474
161 1R6B ADP 0.0005392 0.47741 7.89474
162 4OHY ANP 0.00009518 0.47256 7.89474
163 5LTJ ADP 0.0001255 0.40618 7.89474
164 1HE1 GDP 0.0000002527 0.59761 7.95455
165 1HE1 AF3 0.00001715 0.57316 7.95455
166 4P3Y GDP 0.000000001301 0.54222 8.24176
167 1VHT BA3 0.0006297 0.46896 8.25688
168 4MKG AP5 0.0004954 0.45865 8.29493
169 2QZ4 ADP 0.0003536 0.48078 8.39695
170 2HF9 GSP 0.00000009098 0.63253 8.42105
171 2XT3 ADP 0.000003936 0.61978 8.42105
172 1ION ADP 0.00008072 0.51101 8.42105
173 5XDR ADP 0.000438 0.48177 8.42105
174 5VGR GDP 0.0005331 0.46265 8.42105
175 3B7G ANP 0.001417 0.45717 8.42105
176 4KBF AMP 0.004075 0.44442 8.42105
177 3RC3 ANP 0.004375 0.44286 8.42105
178 2BIF ANP 0.001001 0.4382 8.42105
179 2BIF SIN 0.001793 0.4382 8.42105
180 3BD9 A3P 0.01006 0.41602 8.42105
181 3VPD BUA 0.01256 0.41045 8.42105
182 5KUT GDP 0.0000002723 0.49928 8.46561
183 3UIE ANP 0.00002459 0.53534 8.5
184 1G7C 5GP 0.0000004519 0.63501 8.51064
185 3SBD GNP 0.000000002424 0.65219 8.55615
186 3DEF GDP 0.00001438 0.53969 8.77863
187 2IYL GDP 0.000003161 0.59327 8.80282
188 2FJU GSP 0.0000000004184 0.71787 8.94737
189 1TQ4 GDP 0.00000008692 0.61765 8.94737
190 4H1V GNP 0.000003407 0.56159 8.94737
191 1OYY AGS 0.002551 0.44963 8.94737
192 4OI4 ATP 0.0004595 0.4485 8.94737
193 1KK8 BEF ADP 0.00001426 0.53355 9.35252
194 4PC3 GDP 0.0000001151 0.63631 9.47368
195 2OG2 MLI 0.000004184 0.61352 9.47368
196 3B9Q MLI 0.000003957 0.60866 9.47368
197 5L3V GDP 0.000001861 0.58816 9.47368
198 5L3R GCP 0.00000174 0.54342 9.47368
199 1P9B GDP 0.00002694 0.5211 9.47368
200 3EC1 GDP 0.000000162 0.51186 9.47368
201 2FAH GDP 0.0003024 0.47873 9.47368
202 1IN4 ADP 0.0004862 0.45991 9.47368
203 3FVQ ATP 0.0008052 0.4461 9.47368
204 3DZD ADP 0.000941 0.45601 9.51087
205 5N69 ADP 0.00005377 0.51329 9.54774
206 2CBZ ATP 0.000008145 0.60712 9.70464
207 1APZ ASP 0.03562 0.4003 9.92908
208 2ZTS ADP 0.002288 0.4302 9.96016
209 1M7G AV2 0.0000007573 0.63344 10
210 2QEN ADP 0.00007168 0.50194 10
211 2OBM ADP 0.001604 0.47614 10
212 1M7G ADP 0.0002288 0.43281 10
213 1M7G ADX 0.0001587 0.42696 10
214 3QF7 ANP 0.0008641 0.40384 10
215 1XTQ GDP 0.000000003441 0.66153 10.1695
216 3BC1 GNP 0.000000001432 0.66134 10.1695
217 2WKQ GTP 0.00000000501 0.65474 10.241
218 1W0J ADP 0.0001173 0.42344 10.2941
219 1W0J ADP BEF 0.001642 0.40067 10.2941
220 4IHQ ADP 0.0000992 0.5262 10.5263
221 3RLF ANP 0.001133 0.4322 10.5263
222 3IUY AMP 0.019 0.40637 10.5263
223 1F9V ADP 0.00001513 0.40199 10.6628
224 2OZE AGS 0.0006032 0.45577 10.7383
225 2GWH A3P 0.007272 0.41141 10.7383
226 4M7V RAR 0.008978 0.41005 10.8571
227 4M7V NAP 0.007327 0.40113 10.8571
228 2W58 ADP 0.000009192 0.60295 10.8911
229 3VMF GTP 0.0000000001493 0.70062 11.0526
230 4PPF FLC 0.000002031 0.63616 11.0526
231 2ZR9 DTP 0.00005616 0.53154 11.0526
232 2D7D ADP 0.001709 0.45824 11.0526
233 1BG2 ADP 0.0000005695 0.41049 11.0526
234 2F9L GDP 0.0000001195 0.5975 11.0553
235 3T5G GDP 0.000000008653 0.55508 11.1842
236 4QOS ADP 0.001202 0.45573 11.3208
237 1B7T ADP 0.00004837 0.52149 11.5385
238 1PUJ GNP 0.000000002567 0.71241 11.5789
239 1CS4 GSP 0.0000000002964 0.66192 11.5789
240 1AZT GSP 0.0000000003095 0.64881 11.5789
241 5IRR GSP 0.0000002554 0.59045 11.5789
242 3KJI ADP 0.00004568 0.44312 11.5789
243 1CM0 COA 0.01648 0.40198 11.9048
244 1GXU 2HP 0.002662 0.44624 12.0879
245 2C77 GNP 0.00000000001503 0.78034 12.1053
246 2C78 GNP 0.00000000004027 0.7516 12.1053
247 1G4U GDP 0.0000003005 0.60157 12.1053
248 1G4U AF3 0.00008017 0.54117 12.1053
249 2XAU ADP 0.000508 0.47336 12.1053
250 2PZE ATP 0.000004063 0.40129 12.1053
251 4PSW COA 0.01496 0.40051 12.1053
252 5J1S ATP 0.002388 0.41548 12.1951
253 5JCZ GDP 0.00000003413 0.64327 12.2905
254 4LX0 BEF GDP 0.0000000006603 0.67783 12.4294
255 5GOE GDP 0.00000008214 0.65203 12.6316
256 4KFU ACP 0.000002404 0.62428 12.6316
257 3A4M ADP 0.000004068 0.60565 12.6316
258 4R2I ANP 0.002041 0.46525 12.6316
259 5BQ5 ADP BEF 0.000616 0.46941 12.6984
260 4C4P GNP 0.0000000007858 0.67479 12.7168
261 2HV8 GTP 0.000000003237 0.64717 12.7907
262 2KIN ADP 0.000001042 0.40498 13
263 2CJW GDP 0.00000000192 0.75217 13.1579
264 4AG5 ADP 0.00001418 0.58414 13.1579
265 1XMV ADP 0.0000715 0.51973 13.1579
266 3BOS CDP 0.0001229 0.51474 13.1579
267 4R43 GDP 0.0001889 0.50551 13.1579
268 2GK6 ADP 0.00394 0.45037 13.1579
269 5TSH ANP 0.00006402 0.41185 13.1579
270 2ZPA ADP 0.001154 0.40032 13.1579
271 2D7C GTP 0.00000000171 0.65825 13.1737
272 1F2U ATP 0.002697 0.40466 13.5135
273 2ZEJ GDP 0.000008537 0.50173 13.587
274 4WZA ACP 0.00004681 0.52201 13.6842
275 4WZA ADP 0.00004681 0.52201 13.6842
276 5L3S GNP 0.000004579 0.51472 13.6842
277 4IDN GNP 0.00002803 0.50397 13.6842
278 5L3W GDP 0.00001584 0.44954 13.6842
279 2Q2Y ADP 0.002581 0.42827 13.6842
280 2Q2Y MKR 0.003257 0.4229 13.6842
281 4WOP CTP 0.0003551 0.42526 13.7778
282 3Q72 GNP 0.000000002496 0.75916 13.8554
283 2CK3 ANP 0.001599 0.43708 14
284 2CK3 ADP 0.002426 0.41845 14
285 3BER AMP 0.023 0.40223 14.0562
286 3DC4 ADP 0.00001291 0.57958 14.2105
287 1YQT ADP 0.0000589 0.55077 14.2105
288 5I0H ADP BEF 0.000001012 0.5181 14.2105
289 2HT6 GDP 0.0000000008698 0.78235 14.3678
290 1DS6 GDP 0.000000007647 0.72252 14.5833
291 3ZIA ATP 0.0001014 0.51242 14.7368
292 3ZIA ADP 0.0002127 0.48577 14.7368
293 4RZ3 ADP 0.0001152 0.43534 14.7368
294 2W2X GSP 0.0000000004419 0.71684 15.1351
295 2V7Q ATP 0.0000713 0.51355 15.1515
296 2V7Q ADP 0.0002801 0.49705 15.1515
297 3CNL GNP 0.000000002386 0.76015 15.2632
298 1MKY GDP 0.000000001982 0.7515 15.2632
299 2VB6 ADP BEF 0.00007883 0.45982 15.2632
300 4PFO ADP 0.0002135 0.45433 15.2632
301 4LYA ATP 0.0001005 0.51261 15.7895
302 3N29 GOL 0.01962 0.40334 15.7895
303 1W7J ADP BEF 0.00001878 0.52816 15.894
304 3KTA AP5 0.000948 0.45586 15.9341
305 2XTZ GSP 0.00000000007937 0.71161 16.3158
306 1SQ5 ADP 0.0001169 0.50943 16.3158
307 3ZS9 ADP ALF 0.0000617 0.46865 16.3158
308 2WOJ ADP ALF 0.00007759 0.46486 16.3158
309 5KSZ GCP 0.000001183 0.59744 16.8421
310 3TBK ANP 0.0009212 0.48322 16.8421
311 1HTW ADP 0.00002149 0.43325 17.7215
312 4NCN GTP 0.0000000001366 0.71977 17.8947
313 4TMZ GSP 0.0000000002866 0.70639 17.8947
314 2CHG ANP 0.0009726 0.45087 17.8947
315 5CK5 GDP 0.000000003364 0.53444 18.3544
316 3BY9 SIN 0.04115 0.40343 18.4615
317 4HI0 GDP 0.0000002989 0.59445 18.9474
318 1GOT GDP 0.0000008829 0.56762 18.9474
319 1WDT GTP 0.000000002458 0.69371 19.4737
320 1G6O ADP 0.0001709 0.49566 19.4737
321 1OFH ADP 0.0005988 0.46999 19.5402
322 1GWN GTP 0.000000001003 0.62974 20
323 5K5Z ANP 0.0003011 0.44395 20
324 2QN6 GDP 0.000000000905 0.78148 20.4301
325 2ODE ALF GDP 0.0000000005149 0.68797 20.5263
326 1TAD ALF 0.0000000007441 0.63533 20.5263
327 1TAD GDP 0.0000000007441 0.63533 20.5263
328 1SVK ALF GDP 0.0000000009123 0.62152 20.5263
329 1K6M AGS 0.0006115 0.44334 20.5263
330 1M7B GTP 0.000000001534 0.69347 20.6522
331 4P32 ADP 0.001535 0.43027 20.8835
332 1FQK ALF 0.00000008613 0.70951 21.5789
333 1FQJ ALF 0.00000007666 0.70365 21.5789
334 1FQJ GDP 0.0000001076 0.59938 21.5789
335 1FQK GDP 0.0000001543 0.59288 21.5789
336 3NHB ADP 0.00001436 0.5841 21.5789
337 2VOH CIT 0.005718 0.4357 21.6561
338 3WY9 GDP 0.0000000005508 0.7924 21.875
339 4DCT GDP 0.000000006562 0.71445 22.1053
340 4FRZ ADP 0.00001445 0.58389 22.1053
341 3H4S ADP 0.000004975 0.40139 22.1053
342 3CX8 GSP 0.0000000001707 0.65815 22.6316
343 1ZCB GDP 0.0000006244 0.55572 22.6316
344 3AB3 GDP 0.0000001737 0.54657 22.6316
345 1H65 GDP 0.00002323 0.50743 22.6316
346 2OM2 GDP 0.0000003238 0.59295 23.6842
347 1Y3A GDP 0.0000007927 0.56334 23.6842
348 1BH2 GSP 0.000000001029 0.63065 24.2105
349 5KDO GDP 0.0000004159 0.58825 24.2105
350 1RJ9 GCP 0.00003009 0.40155 24.2105
351 3Q85 GNP 0.000000006235 0.7269 24.2604
352 5WDR GNP 0.000000001317 0.66577 24.5614
353 1G7S GDP 0.000000004144 0.72408 24.7368
354 3T12 GDP ALF 0.000000001154 0.68984 24.7368
355 2EW1 GNP 0.0000000002666 0.67201 24.7368
356 3T1O GDP 0.0000001121 0.51979 24.7368
357 2EFE GNH 0.00000003619 0.65945 24.8619
358 4DKX GDP 0.000000001228 0.76177 25.2632
359 3GJ8 GDP 0.000000003658 0.7267 25.2632
360 3GJ5 GDP 0.00000000425 0.72355 25.2632
361 3GJ4 GDP 0.00000001161 0.71356 25.2632
362 3GJ7 GDP 0.00000001308 0.71101 25.2632
363 3GJ0 GDP 0.00000001377 0.70991 25.2632
364 3GJ3 GDP 0.00000001489 0.70822 25.2632
365 3M1I GTP 0.0000000005767 0.68019 25.2632
366 3WYF GTP 0.0000000006943 0.64822 25.2632
367 4XTR ATP 0.0001498 0.45045 25.2632
368 4XVU ATP 0.000183 0.4472 25.2632
369 4XTR ADP 0.0001352 0.43541 25.2632
370 2BME GNP 0.00000000009704 0.70811 25.2688
371 3E5H GNP 0.000000009526 0.62841 25.2809
372 3X1Z GNP 0.000000001262 0.66939 25.7485
373 4HDO GNP 0.000000001084 0.65329 25.7485
374 4HDQ GNP 0.000000004065 0.63095 25.7485
375 4B47 GDP 0.0000000002271 0.81188 25.7895
376 4KVG GTP 0.000000001949 0.65599 26.1905
377 3WYG GTP 0.0000000006496 0.64922 26.3736
378 2Y8E GNP 0.0000000004503 0.68144 26.8156
379 2J0V GDP 0.0000001123 0.50968 26.8868
380 1GUA GNP 0.000000001089 0.65315 27.1605
381 3CH5 GDP 0.0000000041 0.72431 27.3684
382 5UWI GNP 0.0000000004459 0.68469 27.3684
383 5UWP GNP 0.0000000005603 0.68364 27.3684
384 5UWT GNP 0.0000000005173 0.68209 27.3684
385 5UWR GNP 0.0000000005202 0.682 27.3684
386 5UWU GNP 0.000000000536 0.68147 27.3684
387 5DI9 GNP 0.0000000007173 0.6793 27.3684
388 3GJX GTP 0.000000001047 0.66978 27.3684
389 5UWH GNP 0.000000000427 0.66872 27.3684
390 5DIF GNP 0.0000000004517 0.6678 27.3684
391 5UWW GNP 0.0000000005124 0.66571 27.3684
392 5UWQ GNP 0.0000000005576 0.6643 27.3684
393 5DHF GNP 0.0000000005834 0.66355 27.3684
394 1IBR GNP 0.0000000008389 0.65752 27.3684
395 4HAT GNP 0.0000000005144 0.65282 27.3684
396 5BXQ GDP 0.000000003646 0.5576 27.3684
397 4D0G GTP 0.000000002624 0.62503 27.5362
398 5SZH GNP 0.0000000006556 0.67795 27.8947
399 3RAB GNP 0.000000002393 0.65241 28.4024
400 3TKL GTP 0.0000000006358 0.68356 28.4211
401 2GJ8 ALF GDP 0.000000009185 0.61722 28.4884
402 2PEZ DAT 0.0001971 0.4659 28.4916
403 2PEZ GGZ 0.0001971 0.4659 28.4916
404 2G77 GDP 0.0000000003739 0.74012 28.9474
405 2G77 AF3 0.0000003222 0.67108 28.9474
406 3CPJ GDP 0.00000004098 0.65697 28.9474
407 3SFV GDP 0.0000003759 0.5347 29.2818
408 1GP2 GDP 0.000001245 0.5552 29.5775
409 5UWO GNP 0.0000000005649 0.66409 30
410 2Y65 ADP 0.00000233 0.41071 30
411 3NKV GNP 0.000000002005 0.65549 30.2857
412 3PQC GDP 0.0000001118 0.64572 30.5263
413 1WF3 GNP 0.000000002448 0.63919 30.5263
414 1G16 GDP 0.0000001744 0.59747 30.5882
415 1D5C GDP 0.00000004594 0.64591 30.8642
416 2A9K GDP 0.00000002256 0.56116 31.016
417 3QBT GNP 0.0000000001402 0.70171 31.0345
418 3TNF GNP 0.0000000004012 0.65674 31.0345
419 4LHW GNP 0.000000001952 0.65596 31.0345
420 1EK0 GNP 0.0000000005059 0.67942 31.1765
421 2FFQ GSP 0.0000000001297 0.70627 31.5789
422 1KAO GDP 0.00000008825 0.63313 31.7365
423 2WMO GTP 0.000000001143 0.73952 32.1053
424 4DID GDP 0.00000002007 0.69103 32.1053
425 2NGR GDP 0.00000002173 0.68938 32.1053
426 1A4R GDP 0.00000001688 0.65677 32.1053
427 1A4R GNH 0.00000002658 0.65663 32.1053
428 1GRN AF3 0.0000007295 0.64445 32.1053
429 2NGR AF3 0.0000007495 0.64384 32.1053
430 1NF3 GNP 0.000000004731 0.64057 32.1053
431 1GRN GDP 0.0000001787 0.61931 32.1053
432 4ITR GDP 0.0000003135 0.60075 32.1053
433 2FH5 GTP 0.00000000004947 0.75796 32.6316
434 1UAD GNP 0.000000002297 0.65312 33.1429
435 1ZC3 GNP 0.000000002269 0.64061 33.1429
436 4YC7 GNP 0.000000003229 0.62095 33.7017
437 1X6V ADP 0.0001721 0.43909 34.2105
438 1U8Z GDP 0.00000003123 0.62172 34.5238
439 1KY3 GDP 0.00000005679 0.65044 34.6154
440 2GCO GNP 0.000000003282 0.69758 36.3158
441 5JCP GDP ALF 0.000000006867 0.68313 36.3158
442 2GCN GDP 0.0000002627 0.58993 36.3158
443 1OW3 GDP 0.0000002999 0.52445 36.3158
444 5UQW GDP 0.00000001912 0.60861 37.037
445 5IRC GDP 0.0000003699 0.50405 37.0968
446 5HPY GDP 0.0000002211 0.5288 37.2973
447 4D0N GDP 0.00000002485 0.51939 37.2973
448 1TU3 GNP 0.0000000003363 0.68651 37.4269
449 1KMQ GNP 0.000000001109 0.68197 37.5
450 4DSU GDP 0.00000004123 0.59211 37.5661
451 5TAR GDP 0.00000004912 0.65334 37.8378
452 5TB5 GDP 0.00000003354 0.53517 37.8378
453 1CXZ GSP 0.0000000006737 0.69974 37.9121
454 3MJH GTP 0.0000000002574 0.69116 38.0952
455 4XOI GTP 0.000000002388 0.64374 38.3333
456 3LXR GDP 0.0000001012 0.64775 38.3784
457 4XSH GSP 0.000000006426 0.67528 38.5475
458 1TX4 ALF GDP 0.000000002661 0.66617 38.9831
459 2C5L GTP 0.00000000124 0.65109 39.3064
460 4K81 GTP 0.000000007527 0.60966 39.7661
461 5E95 GDP 0.0000001301 0.62553 40.4762
462 1LFD GNP 0.000000001347 0.6624 40.7186
463 5UWS GNP 0.0000000008519 0.6449 40.9091
464 1WQ1 AF3 0.0000001705 0.69194 40.9639
465 2UZI GTP 0.000000002892 0.64912 40.9639
466 3DDC GNP 0.000000001878 0.64405 40.9639
467 3KUD GDP 0.00000008584 0.61788 40.9639
468 1CLU DBG 0.0000002192 0.60399 40.9639
469 1WQ1 GDP 0.0000001972 0.58846 40.9639
470 3DOE GTP 0.000000000001874 0.79718 41.0526
471 5O2T GSP 0.000000004409 0.63012 41.4201
472 5XCO GDP 0.00000001393 0.56139 41.5205
473 1NVV GNP 0.0000000009256 0.65582 41.5663
474 1NVU GTP 0.000000001699 0.64577 41.5663
475 4M9Q GNP 0.000000000001004 0.81956 41.5789
476 5UFQ GNP 0.00000001714 0.6182 42.7711
477 1KSH GDP 0.000000000002039 0.72695 43.0108
478 4ZI2 GNP 0.000000000001506 0.74497 43.1579
479 4GOJ GNP 0.0000000000009055 0.7529 43.3862
480 2A5F GTP 0.00000000001585 0.74893 45.1429
481 1FZQ GDP 0.0000000006427 0.77566 45.3039
482 3PCR GTP 0.00000000001064 0.76583 46.2963
483 4BAS GNP 0.00000000003348 0.69415 46.3158
484 2J59 GTP 0.000000000006889 0.77368 46.3855
485 2W83 GTP 0.000000000003324 0.78683 46.6667
486 5UWJ GNP 0.0000000005976 0.66315 46.6667
487 4KAX GTP 0.000000000002169 0.80538 47.3373
488 3N5C GDP 0.0000000007519 0.77229 47.5309
489 3AQ4 GDP 0.000000002573 0.73407 47.8261
490 1UPT GTP 0.00000000001122 0.77512 47.9532
491 1MR3 G3D 0.000000009799 0.70606 48.0663
492 5DI3 GNP 0.000000000002037 0.80653 48.1081
493 2X77 GDP 0.000000001157 0.75081 49.7355
Pocket No.: 2; Query (leader) PDB : 1M2O; Ligand: GNP; Similar sites found: 27
This union binding pocket(no: 2) in the query (biounit: 1m2o.bio3) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3ITJ CIT 0.02553 0.40494 4.14201
2 1RRC ADP 0.000004143 0.40521 4.21053
3 2Z5F A3P 0.007736 0.40198 4.36242
4 1VMK GUN 0.02502 0.40701 4.73684
5 3VM7 GLC 0.008517 0.42626 5.0813
6 5E5U MLI 0.007644 0.42649 5.52764
7 3EWA ANP 0.00006546 0.4105 5.59006
8 1UJ2 ADP 0.001497 0.40969 5.95238
9 2HK9 ATR 0.01937 0.40449 6.18182
10 4PU6 ASP 0.01733 0.4153 6.31579
11 3LN9 FLC 0.008587 0.41126 7.19424
12 2CE7 ADP 0.0002949 0.41006 7.36842
13 5M67 NAD 0.01873 0.4027 7.36842
14 5M67 3D1 0.01956 0.40186 7.36842
15 2QG6 NMN 0.001424 0.40712 9.04523
16 1GVF PGH 0.03322 0.40049 10.5263
17 4C25 13P 0.02832 0.40007 10.5263
18 3CV2 OXL 0.04173 0.40115 10.7143
19 4O48 ASP 0.02152 0.41249 11.5789
20 5C2N NAG 0.03154 0.40364 12.5
21 3R4Z GLA 0.02294 0.41071 13.1579
22 2ZJ5 ADP 0.03011 0.40536 13.1579
23 2F5X ASP 0.02573 0.40894 13.4615
24 2IL4 COA 0.01357 0.40097 13.5922
25 1SW1 PBE 0.009469 0.43273 13.6842
26 5IFS ADP 0.0003071 0.40942 16.3158
27 1QHH ATP 0.01429 0.40711 18.315
Pocket No.: 3; Query (leader) PDB : 1M2O; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1m2o.bio1) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1M2O; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1m2o.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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