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Receptor
PDB id Resolution Class Description Source Keywords
1NVT 2.35 Å EC: 1.1.1.25 CRYSTAL STRUCTURE OF SHIKIMATE DEHYDROGENASE (AROE OR MJ1084) IN COMPLEX WITH NADP+ METHANOCALDOCOCCUS JANNASCHII STRUCTURAL GENOMICS PSI PROTEIN STRUCTURE INITIATIVE NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS NYSGXRC OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURE OF SHIKIMATE 5-DEHYDROGENASE (SDH) BOUND TO NADP: INSIGHTS INTO FUNCTION AND EVOLUTION STRUCTURE V. 11 1005 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAP A:288;
B:289;
Valid;
Valid;
none;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
ZN A:290;
B:291;
Part of Protein;
Part of Protein;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1NVT 2.35 Å EC: 1.1.1.25 CRYSTAL STRUCTURE OF SHIKIMATE DEHYDROGENASE (AROE OR MJ1084) IN COMPLEX WITH NADP+ METHANOCALDOCOCCUS JANNASCHII STRUCTURAL GENOMICS PSI PROTEIN STRUCTURE INITIATIVE NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS NYSGXRC OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURE OF SHIKIMATE 5-DEHYDROGENASE (SDH) BOUND TO NADP: INSIGHTS INTO FUNCTION AND EVOLUTION STRUCTURE V. 11 1005 2003
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 1NVT - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 1NVT - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 1NVT - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAP; Similar ligands found: 123
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NHD 0.68254 0.958904
10 NJP 0.661417 0.972973
11 NFD 0.658915 0.934211
12 NXX 0.619048 0.959459
13 DND 0.619048 0.959459
14 AMP NAD 0.606061 0.958904
15 ZID 0.605839 0.972603
16 NAQ 0.59854 0.922078
17 ATR 0.59292 0.917808
18 NAE 0.591241 0.946667
19 NDE 0.58042 0.986301
20 A22 0.571429 0.958904
21 NAJ 0.567164 0.986111
22 A2R 0.563025 0.932432
23 NDC 0.561644 0.922078
24 NA7 0.552846 0.907895
25 ODP 0.551471 0.935065
26 A2P 0.539823 0.930556
27 8ID 0.537313 0.910256
28 NPW 0.525547 0.8875
29 NZQ 0.521739 0.910256
30 CNA 0.521739 0.959459
31 NDP 0.514493 0.922078
32 PO4 PO4 A A A A PO4 0.503937 0.930556
33 1DG 0.503401 0.922078
34 DG1 0.503401 0.922078
35 TXP 0.5 0.922078
36 NMN AMP PO4 0.492958 0.921053
37 XNP 0.492958 0.875
38 25L 0.492308 0.958904
39 25A 0.492063 0.972222
40 NMN 0.486726 0.888889
41 NGD 0.485714 0.935065
42 9JJ 0.481707 0.8875
43 2AM 0.477876 0.891892
44 ADP 0.458333 0.945205
45 PAP 0.451613 0.931507
46 A2D 0.445378 0.945205
47 AN2 0.442623 0.932432
48 7L1 0.441558 0.777778
49 ADP PO3 0.44 0.944444
50 SAP 0.44 0.896104
51 AGS 0.44 0.896104
52 M33 0.439024 0.906667
53 AR6 AR6 0.438849 0.945205
54 BA3 0.438017 0.945205
55 OAD 0.43609 0.92
56 ADP BMA 0.43609 0.92
57 DQV 0.435714 0.958904
58 HEJ 0.435484 0.945205
59 ATP 0.435484 0.945205
60 OOB 0.435115 0.958904
61 B4P 0.434426 0.945205
62 AP5 0.434426 0.945205
63 GAP 0.433071 0.92
64 0WD 0.432432 0.922078
65 2A5 0.432 0.87013
66 5FA 0.432 0.945205
67 AQP 0.432 0.945205
68 AT4 0.430894 0.907895
69 00A 0.428571 0.909091
70 DAL AMP 0.427481 0.932432
71 CA0 0.427419 0.92
72 ADP ALF 0.426357 0.871795
73 ALF ADP 0.426357 0.871795
74 9X8 0.425373 0.871795
75 ACP 0.424 0.92
76 NAJ PZO 0.423841 0.897436
77 9SN 0.423358 0.897436
78 ADP VO4 0.423077 0.932432
79 VO4 ADP 0.423077 0.932432
80 WAQ 0.422222 0.884615
81 V3L 0.421875 0.945205
82 ACQ 0.421875 0.92
83 ADQ 0.421053 0.92
84 AR6 0.420635 0.918919
85 APR 0.420635 0.918919
86 ATP A A A 0.42029 0.958333
87 CO7 0.419753 0.786517
88 3OD 0.419118 0.92
89 1ZZ 0.419118 0.841463
90 DLL 0.41791 0.958904
91 AD9 0.417323 0.92
92 NAX 0.416667 0.875
93 OVE 0.416667 0.857143
94 MYR AMP 0.416058 0.841463
95 AV2 0.415385 0.868421
96 A3P 0.414634 0.944444
97 NNR 0.414414 0.72973
98 OMR 0.413793 0.831325
99 6YZ 0.412214 0.92
100 ANP 0.410853 0.92
101 A1R 0.410448 0.860759
102 ABM 0.409836 0.893333
103 A 0.408333 0.944444
104 AMP 0.408333 0.944444
105 SON 0.408 0.933333
106 PPS 0.407692 0.829268
107 5AL 0.407692 0.932432
108 NAI 0.406897 0.909091
109 7D3 0.406504 0.857143
110 ADX 0.404762 0.829268
111 ATF 0.40458 0.907895
112 3UK 0.404412 0.945946
113 TYR AMP 0.404255 0.921053
114 AMP DBH 0.404255 0.894737
115 139 0.402685 0.875
116 50T 0.401575 0.906667
117 SRP 0.401515 0.907895
118 A A 0.40146 0.972222
119 B5V 0.40146 0.933333
120 A3R 0.4 0.860759
121 3AM 0.4 0.90411
122 B5M 0.4 0.921053
123 FA5 0.4 0.933333
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1NVT; Ligand: NAP; Similar sites found with APoc: 905
This union binding pocket(no: 1) in the query (biounit: 1nvt.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 1FWV SGA MAG FUC None
2 4W6Z 8ID 1.39373
3 3ICT ADP 1.39373
4 3ICS ADP 1.39373
5 3ICT FAD 1.39373
6 3ICR FAD 1.39373
7 3ICS FAD 1.39373
8 2Q1W NAD 1.39373
9 5U5N NAD 1.43369
10 3K5I AIR 1.74216
11 2NVK NAP 1.74216
12 2I3G NAP 1.74216
13 1Q9I FAD 1.74216
14 1Q9I TEO 1.74216
15 2O4C NAD 1.74216
16 3RC1 NAP 1.74216
17 1GAD NAD 1.74216
18 3RC1 TLO 1.74216
19 4M52 FAD 1.74216
20 4M52 M52 1.74216
21 1CER NAD 1.74216
22 2NVK FAD 1.74216
23 2B9W FAD 1.74216
24 1N1G BCP 1.74216
25 6GNC FAD 1.74216
26 3QWB NDP 1.74216
27 4CJX NAP 1.88088
28 1OAA OAA 1.9305
29 3OND NAD 2.09059
30 3OND ADN 2.09059
31 5FI3 NAP 2.09059
32 4ZVV GN0 2.09059
33 4ZVV NAD 2.09059
34 5W3K NDP 2.09059
35 5W3K 9TY 2.09059
36 1MV8 NAD 2.09059
37 4PLG NAI 2.09059
38 4PLG OXM 2.09059
39 4YAC NAI 2.09059
40 1RM0 D6P 2.09059
41 1MUU NAD 2.09059
42 5XWV 8H6 2.09059
43 5XWV NDP 2.09059
44 2A8X FAD 2.09059
45 4REP FAD 2.09059
46 1RM0 NAI 2.09059
47 1KNR FAD 2.09059
48 1W8D NAP 2.09059
49 1W73 NAP 2.09059
50 4BJZ P3A 2.09059
51 4BJZ FAD 2.09059
52 1W6U NAP 2.09059
53 1Q0H FOM 2.09059
54 1Q0H NDP 2.09059
55 5G4L NDP 2.0979
56 5T9F TYR 2.21402
57 5T9F NAP 2.21402
58 5T9E NAP 2.21402
59 3AXB PRO 2.23214
60 3AXB FAD 2.23214
61 2CFC NAD 2.4
62 1O0S NAI 2.43902
63 5M67 NAD 2.43902
64 5M67 3D1 2.43902
65 5M67 ADE 2.43902
66 1GQ2 NAP 2.43902
67 4MP8 MLI 2.43902
68 4MP8 NAD 2.43902
69 1V6A TRE 2.43902
70 2GZ3 NAP 2.43902
71 2DBZ NAP 2.43902
72 1QO8 FAD 2.43902
73 2QA1 FAD 2.43902
74 6A0S NDP 2.43902
75 6A0S HSE 2.43902
76 1SOW NAD 2.43902
77 2NAD NAD 2.43902
78 2F5Z FAD 2.43902
79 4EMI NAD 2.43902
80 1YKJ PHB 2.43902
81 1YKJ FAD 2.43902
82 2GLX NDP 2.43902
83 5JWC FAD 2.43902
84 3FWN ATR 2.43902
85 4AT0 FAD 2.43902
86 2QZZ EMF 2.43902
87 2QZZ NAP 2.43902
88 4EMI FAD 2.43902
89 4PLT NAI 2.43902
90 1LC3 NAD 2.43902
91 1SOW OXL 2.43902
92 1U8X NAD 2.43902
93 1VDC FAD 2.43902
94 3NDJ JHZ 2.43902
95 3NDJ SAH 2.43902
96 4PLT OXM 2.43902
97 3B6Z CO7 2.43902
98 1E7S NAP 2.49221
99 5THQ NDP 2.57353
100 3RFV NAI 2.62172
101 2DTX BMA 2.65152
102 5OJI ISN 2.69231
103 5OJI NAP 2.69231
104 4J7U NAP 2.77778
105 4J7U YTZ 2.77778
106 1UXG NAD 2.78746
107 1UXG FUM 2.78746
108 1J0X NAD 2.78746
109 1GUZ NAD 2.78746
110 4JDR FAD 2.78746
111 2WPF WPF 2.78746
112 5G3U FDA 2.78746
113 1DSS NAD 2.78746
114 2WPF FAD 2.78746
115 5G3U ITW 2.78746
116 1RM4 NDP 2.78746
117 5BRT CH9 2.78746
118 5BRT FAD 2.78746
119 5ZYN FAD 2.78746
120 1H82 FAD 2.78746
121 1H82 GZZ 2.78746
122 1KJ8 GAR 2.78746
123 1BZL GCG 2.78746
124 2ZXI FAD 2.78746
125 1BZL FAD 2.78746
126 4YKG FAD 2.78746
127 1BDB NAD 2.78746
128 2J5V PCA 2.78746
129 1R6D DAU 2.78746
130 1R6D NAD 2.78746
131 4YKG NAD 2.78746
132 1KEW NAD 2.78746
133 6C4T NA7 2.78746
134 1KEW TYD 2.78746
135 3ETG GLU 2.78746
136 3ETG GTP 2.78746
137 5OC1 FAD 2.78746
138 3ETG NDP 2.78746
139 4KOA NDP 2.78746
140 1H74 ILE 2.78746
141 3C7A NAD 2.78746
142 1Y1P NMN AMP PO4 2.78746
143 3ZV6 NAD 2.84698
144 3ZV6 4HB 2.84698
145 2F1K NAP 2.86738
146 5BSH PRO 2.88809
147 2BKA NDP 2.89256
148 2DC1 NAD 2.9661
149 5Z2F NAP 3.01887
150 1GEE NAD 3.06513
151 1TE2 PGA 3.09735
152 4MDB RLT 3.11111
153 3OJF IMJ 3.11284
154 3OJF NDP 3.11284
155 3NJ4 NAD 3.13589
156 3NJ4 AFX 3.13589
157 4RQU NAD 3.13589
158 1XHC FAD 3.13589
159 2Q7V FAD 3.13589
160 1T26 GBD 3.13589
161 1T26 NAI 3.13589
162 4AP3 NAP 3.13589
163 4AP3 FAD 3.13589
164 4B63 FAD 3.13589
165 4B63 NAP 3.13589
166 4B63 ORN 3.13589
167 4Y9D NAI 3.13589
168 2NU8 COA 3.13589
169 1F8G NAD 3.13589
170 1PGP 6PG 3.13589
171 1FEC FAD 3.13589
172 3OA2 NAD 3.13589
173 3DAG FEG 3.13589
174 3FXU TSU 3.13589
175 3GF4 FAD 3.13589
176 3GF4 UPG 3.13589
177 4IV9 FAD 3.13589
178 4YAG NAI 3.13589
179 2PK3 A2R 3.13589
180 2EWM NAD 3.21285
181 4URF NAD 3.22581
182 1JAY NAP 3.30189
183 6F9Q NAD 3.30882
184 5YEC ATP 3.36134
185 1IY8 NAD 3.37079
186 1SC6 NAD 3.46535
187 2IZ1 ATR 3.48432
188 2ZJ1 ARJ 3.48432
189 2ZJ1 NAD 3.48432
190 2JHF NAD 3.48432
191 1LDM NAD 3.48432
192 2VYN NAD 3.48432
193 1HYH NAD 3.48432
194 1D4D FAD 3.48432
195 4TSK NDP 3.48432
196 5GZ6 7C3 3.48432
197 5I39 FAD 3.48432
198 5GZ6 NDP 3.48432
199 4TXI FAD 3.48432
200 5CAE SIN 3.48432
201 2YVF FAD 3.48432
202 2YVF NAD 3.48432
203 2VVM FAD 3.48432
204 3E1T FAD 3.48432
205 1YKF NAP 3.48432
206 2VVL FAD 3.48432
207 5UAO FAD 3.48432
208 5CAE COA 3.48432
209 3GMB FAD 3.48432
210 1Z82 NDP 3.48432
211 4RSL FAD 3.48432
212 5EZ7 FAD 3.48432
213 1COY FAD 3.48432
214 2YVJ NAI 3.48432
215 5NII FAD 3.48432
216 1BXK NAD 3.48432
217 1COY AND 3.48432
218 2BRY FAD 3.48432
219 3WMX NAD 3.48432
220 3H8V ATP 3.48432
221 4Q9N NAI 3.48432
222 4MO2 FDA 3.48432
223 2YVJ FAD 3.48432
224 4MO2 FAD 3.48432
225 4KQW NAP 3.48432
226 3N6M GTP 3.48432
227 1FK8 NAD 3.50195
228 5DEQ ARA 3.50877
229 2DKN NAI 3.52941
230 1O8B ABF 3.65297
231 5Z2L NDP 3.67347
232 4EMJ FAD 3.73832
233 1PN0 FAD 3.7594
234 1PN0 IPH 3.7594
235 1U3U NAD 3.83275
236 1U3U BNF 3.83275
237 1V8B NAD 3.83275
238 5EIN NAP 3.83275
239 1F06 NDP 3.83275
240 1F06 2NP 3.83275
241 3CTY FAD 3.83275
242 6ER9 NAP 3.83275
243 6ER9 FAD 3.83275
244 3WLE NAD 3.83275
245 2NPX NAD 3.83275
246 3LXD FAD 3.83275
247 3WQQ IB3 3.83275
248 3WQQ NDP 3.83275
249 4KP7 NAP 3.83275
250 2AQJ TRP 3.83275
251 2AQJ FAD 3.83275
252 4KP7 1UQ 3.83275
253 5NUE NAD 3.83275
254 5N0J FAD 3.83275
255 5NUF NAD 3.83275
256 2NPX FAD 3.83275
257 2J8Z NAP 3.83275
258 5MLR GRQ 3.83275
259 5MLR NAP 3.83275
260 3O03 NAP 3.83275
261 2JL1 NAP 3.83275
262 5K4W THR 3.83275
263 5K4W NAI 3.83275
264 4J4H 1J1 3.861
265 4J4H NAI 3.861
266 4JK3 NAD 3.861
267 2RH4 EMO 3.97112
268 1I36 NAP 4.16667
269 2FZW NAD 4.18118
270 1DLJ UGA 4.18118
271 1DLJ NAI 4.18118
272 3WBF NAP 4.18118
273 3WBF API 4.18118
274 2B5W NAP 4.18118
275 3VPH NAD 4.18118
276 4E5N NAD 4.18118
277 2B4R NAD 4.18118
278 3ITJ CIT 4.18118
279 1RSG FAD 4.18118
280 3V1Y NAD 4.18118
281 5XVH NAP 4.18118
282 4Z0H NAD 4.18118
283 4OPC PGT 4.18118
284 4OPC FDA 4.18118
285 3VPH OXM 4.18118
286 2HJR APR 4.18118
287 4L8V NAP 4.18118
288 1V59 FAD 4.18118
289 1PZG A3D 4.18118
290 2B4R AES 4.18118
291 3UCL NAP 4.18118
292 3UCL CYH 4.18118
293 3UCL FAD 4.18118
294 1V59 NAD 4.18118
295 4NTD FAD 4.18118
296 3NYC IAR 4.18118
297 3NYC FAD 4.18118
298 4CNK FAD 4.18118
299 1OC2 TDX 4.18118
300 1OC2 NAD 4.18118
301 3ITJ FAD 4.18118
302 5YB7 ORN 4.18118
303 5YB7 FAD 4.18118
304 5KVS 6XR 4.18118
305 5KVS NAP 4.18118
306 5DF1 NAP 4.18118
307 5DF1 58X 4.18118
308 1X87 NAD 4.18118
309 1M2W NAD 4.18118
310 1LJ8 NAD 4.18118
311 3C1O NAP 4.18118
312 5X68 FAD 4.18118
313 3Q9T FAY 4.18118
314 3I6I NDP 4.18118
315 5LD5 NAD 4.18994
316 1I2B USQ 4.20792
317 1I2B NAD 4.20792
318 1I2B UPG 4.20792
319 2WBV SIA 4.2328
320 2PEL LBT 4.23729
321 5O4J 9KH 4.37956
322 5O4J SAH 4.37956
323 5O4J PJL 4.37956
324 1HKU NAD 4.46927
325 5A04 NDP 4.52962
326 5A04 BGC 4.52962
327 5MBX SP5 4.52962
328 5MBX FAD 4.52962
329 5TTJ FAD 4.52962
330 1TDF NAP 4.52962
331 1EZ4 NAD 4.52962
332 5AYV KPL 4.52962
333 2Z3Y F2N 4.52962
334 1TDF FAD 4.52962
335 5AYV NAP 4.52962
336 1GPE FAD 4.52962
337 1YQZ FAD 4.52962
338 1NE7 AGP 4.52962
339 1KYQ NAD 4.52962
340 2VTD LKM 4.52962
341 6F97 FAD 4.52962
342 1I8T FAD 4.52962
343 6AIN FAD 4.52962
344 1SJD NPG 4.52962
345 5HSA FAS 4.52962
346 4EA7 COA 4.54545
347 4EA7 JB2 4.54545
348 2AG8 NAP 4.56274
349 1UWK NAD 4.66786
350 1UWK URO 4.66786
351 5GWT NAD 4.67626
352 5GWT SIN 4.67626
353 5KMS NAD 4.69136
354 5KMS FAD 4.69136
355 3OZ2 FAD 4.78589
356 6GAR FAD 4.87106
357 1RYD NDP 4.87805
358 1H6C NDP 4.87805
359 1H6C SIN 4.87805
360 2IID FAD 4.87805
361 2IID PHE 4.87805
362 4XDY NAI 4.87805
363 1MO9 FAD 4.87805
364 3CIF NAD 4.87805
365 1MO9 KPC 4.87805
366 2GMH FAD 4.87805
367 2FR1 NDP 4.87805
368 3CIF G3H 4.87805
369 6FHO FAD 4.87805
370 5EOW FAD 4.87805
371 4USQ FAD 4.87805
372 2AE2 PTO 4.87805
373 3HB5 NAP 4.87805
374 2AE2 NAP 4.87805
375 4EIP FAD 4.87805
376 2PZM UDP 4.87805
377 2PZM NAD 4.87805
378 5MDH NAD 4.87805
379 3H5N ATP 4.87805
380 4MDH NAD 4.87805
381 3LU1 NAD 4.87805
382 1G0N NDP 4.947
383 1G0N PHH 4.947
384 1O6Z NAD 4.9505
385 2BKX F6R 4.95868
386 1LSS NAD 5
387 4UP3 NDP 5.09554
388 4UP3 FAD 5.09554
389 1DRV A3D 5.12821
390 5WQP NAP 5.12821
391 1VL0 NAI 5.13699
392 3RNM FAD 5.17241
393 3QFA FAD 5.17241
394 5OJL TXP 5.22648
395 4GKV NAD 5.22648
396 2IXB A2G 5.22648
397 2IXB NAD 5.22648
398 1YY5 FAD 5.22648
399 4R5M 4NO 5.22648
400 4XYB NDP 5.22648
401 1GV0 NAD 5.22648
402 5Z21 NAI 5.22648
403 3AD8 NAD 5.22648
404 3UOY FAD 5.22648
405 3UOY NAP 5.22648
406 4MIG G3F 5.22648
407 4R5M NAP 5.22648
408 2DKH FAD 5.22648
409 2DKH 3HB 5.22648
410 5JY6 NAD 5.22648
411 2RGJ FAD 5.22648
412 5BJX UDP 5.22648
413 3AD8 PYC 5.22648
414 3AD8 FAD 5.22648
415 5BJX NAD 5.22648
416 4PIV NDP 5.22648
417 3QVP FAD 5.22648
418 4TM3 FAD 5.22648
419 2C29 NAP 5.22648
420 5A1T OXM 5.22648
421 5A1T NAI 5.22648
422 1U1I NAD 5.22648
423 1H9A NAP 5.22648
424 1X14 NAD 5.23691
425 3CH6 311 5.24476
426 3CH6 NAP 5.24476
427 5EES NAP 5.26316
428 1JNR FAD 5.33333
429 5OOH 9ZZ 5.33981
430 5OOH NAP 5.33981
431 4J1Q NDP 5.38793
432 4OOE FOM 5.44554
433 4OOE NDP 5.44554
434 3UIE ANP 5.5
435 5O9F NAD 5.57491
436 5O9F 9ON 5.57491
437 1KOL NAD 5.57491
438 1R37 NAD 5.57491
439 5ZI2 NAD 5.57491
440 5KKA 6V0 5.57491
441 5ZI2 ADP 5.57491
442 5VN0 NAI 5.57491
443 1K3T BRZ 5.57491
444 5TWB FAD 5.57491
445 3IHG FAD 5.57491
446 3ULK NDP 5.57491
447 5K0A FAD 5.57491
448 5KOX RFP 5.57491
449 5KOX FAD 5.57491
450 2CVZ NDP 5.57491
451 5VN0 FAD 5.57491
452 3B8I OXL 5.57491
453 5Y8L HUI 5.57491
454 5Y8L NAD 5.57491
455 6EL3 NAP 5.57491
456 3A4V NAD 5.57491
457 3A4V PYR 5.57491
458 2CUL FAD 5.60345
459 2GDZ NAD 5.61798
460 5A96 GTP 5.62249
461 5TUF TDC 5.62347
462 5TUF FAD 5.62347
463 4HXY NDP 5.70776
464 4HXY ACA 5.70776
465 2Q0L FAD 5.78778
466 2Q0L NAP 5.78778
467 1EJH M7G 5.78947
468 3FPZ AHZ 5.82822
469 1AE1 NAP 5.86081
470 5FJN FAD 5.92105
471 5FJN BE2 5.92105
472 5TOW ADN 5.92335
473 5TOW NAI 5.92335
474 5H81 NAP 5.92335
475 6F3N NAD 5.92335
476 6F3N ADN 5.92335
477 6F3M NAD 5.92335
478 2CDC XYP 5.92335
479 2CDC XYS 5.92335
480 2CDC NAP 5.92335
481 3TWO NDP 5.92335
482 4ZCC FAD 5.92335
483 4ZCC NAI 5.92335
484 1SAY PYR 5.92335
485 9LDB NAD 5.92335
486 6CEP OXM 5.92335
487 6CEP NAD 5.92335
488 1LDN NAD 5.92335
489 1LLU NAD 5.92335
490 1YJQ NAP 5.92335
491 5MIT FAD 5.92335
492 5MIT NAP 5.92335
493 9LDT NAD 5.92335
494 4IDC NDP 5.92335
495 4IDC 1XX 5.92335
496 3S5W NAP 5.92335
497 3AYI FAD 5.92335
498 3AYI HCI 5.92335
499 4ZGS NAD 5.92335
500 1WP4 NDP 5.92335
501 1E6E FAD 5.92335
502 3KLJ FAD 5.92335
503 1E1M NAP 5.92335
504 1E1M FAD 5.92335
505 3LAD FAD 5.92335
506 1PJS NAD 5.92335
507 2JB2 FAD 5.92335
508 2JB2 PHE 5.92335
509 3S5W FAD 5.92335
510 5TUK FAD 5.92335
511 2Y6Q FAD 5.92335
512 2Y6Q I7T 5.92335
513 1VKO NAD 5.92335
514 4Z24 FAD 5.92335
515 5JE8 NAD 5.92335
516 5O98 NAP 5.92335
517 4XFR CIT 5.92335
518 2Q46 NAP 5.92335
519 1Z45 NAD 5.92335
520 2RI1 GLP 5.95745
521 1TUK PGM 5.97015
522 3CMC NAD 5.98802
523 5NM7 GLY 6.01504
524 2IVD FAD 6.06695
525 4O0L NDP 6.18182
526 5O42 BGC 6.20438
527 5O42 9JW 6.20438
528 5O42 NAD 6.20438
529 1E3I CXF 6.27178
530 6A3J NAI 6.27178
531 4DPL NAP 6.27178
532 6A3J SOE 6.27178
533 5TS5 FAD 6.27178
534 1X7D NAD 6.27178
535 1X7D ORN 6.27178
536 4J36 FAD 6.27178
537 4J36 1HR 6.27178
538 1KEV NDP 6.27178
539 4Y1B NAP 6.27178
540 2ZB3 NDP 6.27178
541 4U8P FDA 6.27178
542 4U8P UDP 6.27178
543 1U7T NAD 6.27178
544 3NTA FAD 6.27178
545 1U7T TDT 6.27178
546 4L9Z OXL 6.27178
547 1NNU TCT 6.27178
548 1NNU NAD 6.27178
549 3V0H I3P 6.48968
550 2DFV NAD 6.62021
551 3QJ4 FAD 6.62021
552 1REO FAD 6.62021
553 3CGD COA 6.62021
554 3CGB FAD 6.62021
555 5BUK FAD 6.62021
556 4MOP 2H5 6.62021
557 3CGD FAD 6.62021
558 3CGD NAD 6.62021
559 1QMG APX 6.62021
560 2DM6 IMN 6.62021
561 2HMT NAI 6.62021
562 3A06 NDP 6.62021
563 3F8D FAD 6.62021
564 3A06 FOM 6.62021
565 2DM6 NAP 6.62021
566 4K6B GLU 6.62021
567 3NGL NAP 6.88406
568 1C3V NDP 6.93878
569 6CI9 NAP 6.94981
570 6AA8 NAD 6.96864
571 1F8F NAD 6.96864
572 5U8U FAD 6.96864
573 5J60 FAD 6.96864
574 3H9E NAD 6.96864
575 4XQC NAD 6.96864
576 4XQC 13D 6.96864
577 5AOV NAP 6.96864
578 3SQP FAD 6.96864
579 2A92 NAI 6.96864
580 5HXI FAD 6.96864
581 5HXI 5HN 6.96864
582 4KVL PLM 6.96864
583 6C4M NAP 6.96864
584 1HDG NAD 6.96864
585 5J7X FAD 6.96864
586 3AB1 FAD 6.96864
587 4YT4 FE9 6.96864
588 4J56 FAD 6.96864
589 5FEU NAP 6.96864
590 6GNA FAD 6.96864
591 3RKR NAP 6.96864
592 2GAG NAD 7.07071
593 2GAG FAD 7.07071
594 2GAG FOA 7.07071
595 4YSX FAD 7.0922
596 2DT5 NAD 7.109
597 5UAV NDP 7.14286
598 5UAV TFB 7.14286
599 2BGM NAJ 7.19424
600 1E3W NAD 7.27969
601 1E6W NAD 7.30769
602 1P0F NAP 7.31707
603 5YAP NAI 7.31707
604 2QRK AMP 7.31707
605 1PL6 NAD 7.31707
606 1PL6 572 7.31707
607 5YAP 8S0 7.31707
608 6BII NAP 7.31707
609 4D3F NAP 7.31707
610 2GSD NAD 7.31707
611 1C1X NAD 7.31707
612 1RP0 AHZ 7.31707
613 5DN9 NAD 7.31707
614 1BW9 NAD 7.31707
615 3SJU NDP 7.31707
616 1BXG NAD 7.31707
617 1NAA 6FA 7.31707
618 1NAA ABL 7.31707
619 5MQ6 NDP 7.31707
620 3L4S NAD 7.31707
621 4JNA FAD 7.31707
622 3L4S 3PG 7.31707
623 3NT6 FAD 7.31707
624 5N6C NAD 7.33333
625 2BOS GLA GAL GLC NBU 7.35294
626 2BOS GLA GAL GLC 7.35294
627 5D4V SAH 7.46269
628 5GT9 NAP 7.60456
629 5JCM NAD 7.66551
630 1NVM NAD 7.66551
631 1EBF NAD 7.66551
632 4GUT FAD 7.66551
633 4FWE FAD 7.66551
634 4HSU FAD 7.66551
635 4GUS FAD 7.66551
636 4E13 NAD 7.66551
637 5JCM ISD 7.66551
638 5JCM FAD 7.66551
639 5NA1 FAD 7.66551
640 2PV7 NAD 7.66551
641 3OJO NAD 7.66551
642 2WET FAD 7.66551
643 3FG2 FAD 7.66551
644 2R4J FAD 7.66551
645 2R4J 13P 7.66551
646 3ZNN 4WL 7.66551
647 3ZNN FAD 7.66551
648 4RVU NDP 7.66551
649 4K5S FAD 7.66551
650 4K5S PM0 7.66551
651 6FP4 E1T 7.66551
652 6FP4 FAD 7.66551
653 3NTD FAD 7.66551
654 5FFF NAP 7.7821
655 3K7M FAD 7.88863
656 1H5Q NAP 7.92453
657 4II2 ATP 7.97546
658 4RDH AMP 7.98611
659 4RDI ATP 7.98611
660 3KB6 NAD 8.01394
661 4YRY FAD 8.01394
662 4YRY NAD 8.01394
663 4JBI NDP 8.01394
664 1HYE NAP 8.01394
665 1ZQ9 SAM 8.07018
666 4D79 ATP 8.33333
667 1ZK7 FAD 8.36237
668 4D04 NAP 8.36237
669 4D04 FAD 8.36237
670 2RAB NAD 8.36237
671 2RAB FAD 8.36237
672 5MZI FAD 8.36237
673 5MZI FYK 8.36237
674 5Y77 FAD 8.36237
675 5ZBC FAD 8.36237
676 5X20 NAD 8.36237
677 3HDY FDA 8.36237
678 3HDY GDU 8.36237
679 1GET NAP 8.36237
680 1GET FAD 8.36237
681 3HDY FAD 8.36237
682 3G5S FAD 8.36237
683 1Q1R FAD 8.36237
684 5GUD NDP 8.36237
685 1FS5 TLA 8.36237
686 3O26 NDP 8.36237
687 1ZEM NAD 8.36237
688 5Z75 NAD 8.36237
689 4IF4 BEF 8.65385
690 4B4U NAP 8.7108
691 3BAZ NAP 8.7108
692 5OCM NAP 8.7108
693 2BD0 NAP 8.7108
694 1C0I BE2 8.7108
695 1C0I FAD 8.7108
696 1YFS ALA 8.7108
697 2V6G NAP 8.7108
698 2EXX NAP 8.7108
699 3QWI NAP 8.7108
700 2YYY NAP 8.74636
701 3HAD NAD 8.76623
702 1A5Z NAD 8.77743
703 1YQD NAP 9.01639
704 2E5V FAD 9.05923
705 1YS4 NAP 9.05923
706 5GSN NAP 9.05923
707 5GSN FAD 9.05923
708 5GSN MMZ 9.05923
709 4ITU NAI 9.05923
710 4ITU 1HS 9.05923
711 4D7E FAD 9.05923
712 2WSB NAD 9.05923
713 2ZAT NAP 9.05923
714 3JYN NDP 9.23077
715 1GZ4 ATP 9.40767
716 5YU3 PRO 9.40767
717 5YU3 NAD 9.40767
718 3LZW NAP 9.40767
719 5WGR FAD 9.40767
720 3LZW FAD 9.40767
721 6GAS FAD 9.40767
722 2D2I NAP 9.47368
723 1J5P NAD 9.48617
724 2G5C NAD 9.60854
725 1H2B NAJ 9.7561
726 3GFB NAD 9.7561
727 5BVA FAD 9.7561
728 1O94 ADP 9.7561
729 1DJN ADP 9.7561
730 4NTC FAD 9.7561
731 3GD4 FAD 9.7561
732 3GD4 NAD 9.7561
733 1FL2 FAD 9.7561
734 4FC7 NAP 9.7561
735 4FC7 COA 9.7561
736 1SB8 UD2 9.7561
737 1SB8 NAD 9.7561
738 5KQA GSH 9.84848
739 4BV6 FAD 10.1045
740 2JDU MFU 10.1045
741 5L53 NAP 10.1045
742 1GR0 NAD 10.453
743 4XB2 NDP 10.453
744 4XB2 HSE 10.453
745 1GTE FAD 10.453
746 4C3Y FAD 10.453
747 4TQG NDP 10.453
748 5L4S 6KX 10.453
749 5L4S NAP 10.453
750 4C3Y ANB 10.453
751 1B8U OAA 10.453
752 1B8U NAD 10.453
753 3B20 NAD 10.6195
754 1WDK NAD 10.8014
755 1VL8 NAP 10.8014
756 2GCG NDP 10.8014
757 2CVQ NDP 10.8014
758 1Y8Q ATP 10.8014
759 4USR FAD 10.8014
760 1J49 NAD 11.1498
761 1ZH8 NAP 11.1498
762 1LTH NAD 11.1498
763 5Z20 NAI 11.1498
764 5J5Z FAD 11.1498
765 4X9M FAD 11.1498
766 4XDZ NDP 11.1498
767 5E4R NAP 11.1498
768 3SJ7 NDP 11.1498
769 2BZ1 TAU 11.2245
770 5N53 8NB 11.2821
771 4D42 NAP 11.3475
772 4D42 W0I 11.3475
773 5BXV MGP 11.3636
774 5TC4 NAD 11.3924
775 1RYI GOA 11.4983
776 1RYI FAD 11.4983
777 4EDF UPG 11.4983
778 4RPL FAD 11.4983
779 4RPL 3UC 11.4983
780 4JJF N2I 11.4983
781 4JJF FE9 11.4983
782 1LVL NAD 11.4983
783 1LVL FAD 11.4983
784 1O5I NAD 11.4983
785 1C3M MAN MAN 11.5646
786 5T2U NAP 11.6935
787 5ZZ6 NAD 11.8467
788 5ZZ6 ADP 11.8467
789 3GGO ENO 11.8467
790 3GGO NAI 11.8467
791 2VT3 ATP 11.8467
792 4B7X NAP 11.8467
793 1UJ5 5RP 11.8467
794 2JAP NDP 12.1457
795 2RGH FAD 12.1951
796 2JBM SRT 12.1951
797 3TN7 NJP 12.1951
798 5UR0 NAD 12.5436
799 5U5G NAP 12.5436
800 3T31 DCQ 12.5436
801 3T31 FAD 12.5436
802 5X9D 80F 12.5436
803 4OM8 NAD 12.5436
804 1YB5 NAP 12.5436
805 3X0V FAD 12.5436
806 2YY7 NAD 12.5436
807 1N5D NDP 12.5436
808 4NBW NAD 12.5436
809 3A28 NAD 12.5436
810 3EGI ADP 12.6214
811 1NM5 NAD 12.8079
812 5N2I NAP 12.892
813 2C7G FAD 12.892
814 3O9Z AKG 12.892
815 2C7G ODP 12.892
816 3O9Z NAD 12.892
817 3VZS NAP 12.892
818 1TB4 PEJ 12.892
819 3VZS CAA 12.892
820 5EPO NAP 12.892
821 4BVA NDP 13.2404
822 4BVA T3 13.2404
823 5VKT NAP 13.2404
824 1PR9 NAP 13.2404
825 2GVC FAD 13.2404
826 1VQW FAD 13.2404
827 2GV8 FAD 13.2404
828 3D3W NAP 13.2404
829 2GV8 NDP 13.2404
830 2RGO FAD 13.2404
831 3U4C NDP 13.5231
832 1OMO NAD 13.5889
833 6F7L FAD 13.5889
834 1M0S CIT 13.5889
835 1WMA NDP 13.5889
836 1WMA AB3 13.5889
837 1XG5 NAP 13.5889
838 1PS9 FAD 13.9373
839 2XVF FAD 13.9373
840 2XVE FAD 13.9373
841 5NMX NAP 13.9373
842 5NMX FAD 13.9373
843 1PS9 NAP 13.9373
844 3RJ5 NAD 13.9373
845 1XKQ NDP 13.9373
846 1XSE NDP 13.9373
847 2B4Q NAP 13.9373
848 4OSP NAP 13.9373
849 1LUA NAP 14.2857
850 3WGT QSC 14.2857
851 3WGT FAD 14.2857
852 5DOZ NDP 14.2857
853 4KWI NAP 14.2857
854 4KWI 1TJ 14.2857
855 4YCA NDP 14.6259
856 3QV1 NAD 14.6341
857 4QED NAP 14.6341
858 3WV8 ATP 14.6789
859 2OOR NAD 14.9425
860 1D1T NAD 14.9826
861 5JCA NDP 14.9826
862 1CF2 NAP 14.9826
863 5JCA FAD 14.9826
864 4A0S NAP 14.9826
865 5G6U TRP 14.9826
866 3KIF GDL 15.0943
867 4CQM NAP 15.1639
868 1CDO NAD 15.6794
869 5ODQ FAD 15.6794
870 2GN4 NDP 15.6794
871 2GN4 UD1 15.6794
872 3B1J NAD 16
873 1E5Q NDP 16.0279
874 1VM6 NAD 16.6667
875 3NUG NAD 16.7247
876 1GEG NAD 16.7247
877 5T67 JHZ 16.7247
878 2VHW NAI 17.0732
879 3B1F NAD 17.0732
880 1DIG L37 17.4216
881 1DIG NAP 17.4216
882 4FN4 NAD 17.4216
883 3L9W AMP 17.77
884 3L9W GSH 17.77
885 5T46 MGP 18.1818
886 6C4N NAP 18.4669
887 4XZ3 COA 18.4669
888 3NKS FAD 19.1638
889 2HQM FAD 19.8606
890 4XYM COA 19.8606
891 3ABI NAD 20.2091
892 3ORF NAD 20.5575
893 5L95 AMP 21.25
894 2ZB4 NAP 21.9512
895 2ZB4 5OP 21.9512
896 2YG3 FAD 22.6481
897 4G5H UD7 22.9965
898 4G5H NAP 22.9965
899 2CDU FAD 22.9965
900 2CDU ADP 22.9965
901 4DSG FAD 23.6934
902 4DSG UDP 23.6934
903 2VOH CIT 24.8408
904 1US5 GLU 27.5261
905 2V7Q ADP 28
Pocket No.: 2; Query (leader) PDB : 1NVT; Ligand: NAP; Similar sites found with APoc: 95
This union binding pocket(no: 2) in the query (biounit: 1nvt.bio1) has 21 residues
No: Leader PDB Ligand Sequence Similarity
1 3H4V NAP 1.0453
2 5L4L 7OX 1.39373
3 5L4L NAP 1.39373
4 5EB4 FAD 2.09059
5 2C1X UDP 2.09059
6 4OHU NAD 2.09059
7 4OHU 2TK 2.09059
8 2Y65 ADP 2.09059
9 4NBU NAI 2.4
10 2VAP GDP 2.43902
11 1WVG APR 2.43902
12 3NOJ PYR 2.52101
13 1L7E NAI 2.78746
14 5EVY FAD 2.78746
15 5V2J 7WV 2.78746
16 5V2J UDP 2.78746
17 1RPN NDP 2.78746
18 2AG5 NAD 2.84553
19 3VC1 GST 3.13589
20 5Y1G NAD 3.13589
21 5Y1G AKB 3.13589
22 3VC1 SAH 3.13589
23 4X7Y SAH 3.28467
24 3OIG NAD 3.38346
25 1EK6 UPG 3.48432
26 1EK6 NAI 3.48432
27 5JAQ NAI 3.48432
28 1ORR NAD 3.83275
29 3HVJ 705 4.0724
30 1HDR NAD 4.09836
31 2WYV NAD 4.21456
32 1UDB UFG 4.52962
33 1UDB NAD 4.52962
34 1QG6 NAD 4.5977
35 1QG6 TCL 4.5977
36 4HA6 FAD 4.87805
37 4EIP K2C 4.87805
38 4K26 NDP 5.07246
39 4K26 SFF 5.07246
40 5WQP NCA 5.12821
41 2C29 DQH 5.22648
42 1JA9 NDP 5.22648
43 5T2Y 753 5.22648
44 5AO7 NAG 5.22648
45 2VVG ADP 5.57491
46 1RKX NAD 5.57491
47 4ZRN NAD 5.57491
48 4ZRN UPG 5.57491
49 5E5U MLT 5.68182
50 1GOJ ADP 5.92335
51 2ACV UDP 6.27178
52 1D7O NAD 6.39731
53 1D7O TCL 6.39731
54 5XDT MB3 6.49351
55 5XDT GDP 6.49351
56 1OBB NAD 6.62021
57 4XUC 43G 6.88073
58 4XUC SAM 6.88073
59 1UP7 NAD 6.96864
60 3MB5 SAM 7.05882
61 4RF2 NAP 7.35294
62 4YNU FAD 7.66551
63 4YNU LGC 7.66551
64 5FFF 5XC 7.7821
65 5GUD 2IT 8.36237
66 5GUD CIT 8.36237
67 4O1M NAD 8.36237
68 3QWI CUE 8.7108
69 2Q1S NAI 9.05923
70 3GDN HBX 9.40767
71 3GDN FAD 9.40767
72 5XWC NAP 9.56522
73 5XWC 2IT 9.56522
74 5XWC 8GL 9.56522
75 5LA1 XYP 9.7561
76 6H3O FAD 10.1045
77 1GY8 NAD 10.1045
78 5DP2 NAP 10.453
79 1XCL SAH 11.4983
80 1P1C SAH 11.4983
81 3GEG NAD 12.1457
82 3Q9N COA 12.766
83 1NM5 NAP 12.8079
84 2D5A COA 13.1944
85 4WAS NAP 13.5889
86 1EDO NAP 13.9373
87 6DNT NAD 13.9373
88 1XHL NDP 14.2857
89 2IVF MGD 14.6341
90 1GZ6 NAI 14.9826
91 5TCI MLI 15.6794
92 5T67 SAH 16.7247
93 2AHR NAP 17.4216
94 3OID NDP 17.77
95 1V35 NAI 21.9512
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