Receptor
PDB id Resolution Class Description Source Keywords
1O75 1.95 Å NON-ENZYME: IMMUNE TP47, THE 47-KILODALTON LIPOPROTEIN OF TREPONEMA PALLIDUM TREPONEMA PALLIDUM LIPOPROTEINULLNTIGEN PENICILLIN-BINDING PROTEIN INTEGRAL MLIPOPROTEIN IMMUNOGEN FOUR-DOMAIN PROTEIN ANTIGEN LIPOP
Ref.: CRYSTAL STRUCTURE OF THE 47-KDA LIPOPROTEIN OF TREP PALLIDUM REVEALS A NOVEL PENICILLIN-BINDING PROTEIN J. BIOL. CHEM. V. 277 41857 2002
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PDX PDX C:1;
 Valid;
 none;
 submit data
658.517 n/a S(=O)...
XE A:1415;
A:1416;
B:1415;
B:1416;
B:1417;
 Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
none;
 submit data
131.293 Xe [Xe]
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1O75 1.95 Å NON-ENZYME: IMMUNE TP47, THE 47-KILODALTON LIPOPROTEIN OF TREPONEMA PALLIDUM TREPONEMA PALLIDUM LIPOPROTEINULLNTIGEN PENICILLIN-BINDING PROTEIN INTEGRAL MLIPOPROTEIN IMMUNOGEN FOUR-DOMAIN PROTEIN ANTIGEN LIPOP
Ref.: CRYSTAL STRUCTURE OF THE 47-KDA LIPOPROTEIN OF TREP PALLIDUM REVEALS A NOVEL PENICILLIN-BINDING PROTEIN J. BIOL. CHEM. V. 277 41857 2002
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 225 families.
1 1O75 - PDX PDX n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 67 families.
1 1O75 - PDX PDX n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 45 families.
1 1O75 - PDX PDX n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: PDX PDX; Similar ligands found: 2
No: Ligand ECFP6 Tc MDL keys Tc
1 PDX PDX 1 1
2 TUJ TUG 5LT 0.405063 0.96
Similar Ligands (3D)
Ligand no: 1; Ligand: PDX PDX; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1O75; Ligand: PDX PDX; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1o75.bio1) has 14 residues
No: Leader PDB Ligand Sequence Similarity
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