Receptor
PDB id Resolution Class Description Source Keywords
1OH4 1.35 Å EC: 3.-.-.- STRUCTURAL AND THERMODYNAMIC DISSECTION OF SPECIFIC MANNAN RECOGNITION BY A CARBOHYDRATE-BINDING MODULE THERMOTOGA MARITIMA HYDROLASE CARBOHYDRATE BINDING MODULE MANNAN LECTIN GLYCOSIDE HYDROLASE
Ref.: STRUCTURAL AND THERMODYNAMIC DISSECTION OF SPECIFIC MANNAN RECOGNITION BY A CARBOHYDRATE BINDING MODULE, TMCBM27 STRUCTURE V. 11 665 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BMA BMA BMA BMA GLA BMA GLA B:1;
Valid;
none;
Kd = 0.2 mM
n/a n/a
CA A:1186;
Part of Protein;
none;
submit data
40.078 Ca [Ca+2...
GOL A:1184;
A:1185;
Invalid;
Invalid;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
SO4 A:1187;
Invalid;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1OF4 1.6 Å EC: 3.-.-.- STRUCTURAL AND THERMODYNAMIC DISSECTION OF SPECIFIC MANNAN RECOGNITION BY A CARBOHYDRATE-BINDING MODULE, TMCBM27 THERMOTOGA MARITIMA HYDROLASE/CARBOHYDRATE BINDING MANNAN BINDING CARBOHYDRATE BINDING MODULE POLYSACCHARIDE DEGRADATION HYDROLASE
Ref.: STRUCTURAL AND THERMODYNAMIC DISSECTION OF SPECIFIC MANNAN RECOGNITION BY A CARBOHYDRATE BINDING MODULE, TMCBM27 STRUCTURE V. 11 665 2003
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 283 families.
1 1OH4 Kd = 0.2 mM BMA BMA BMA BMA GLA BMA GLA n/a n/a
2 1OF4 Kd = 2.9 uM BMA BMA BMA BMA BMA n/a n/a
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 235 families.
1 1OH4 Kd = 0.2 mM BMA BMA BMA BMA GLA BMA GLA n/a n/a
2 1OF4 Kd = 2.9 uM BMA BMA BMA BMA BMA n/a n/a
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 193 families.
1 1OH4 Kd = 0.2 mM BMA BMA BMA BMA GLA BMA GLA n/a n/a
2 1OF4 Kd = 2.9 uM BMA BMA BMA BMA BMA n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BMA BMA BMA BMA GLA BMA GLA; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1OF4; Ligand: BMA BMA BMA BMA BMA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1of4.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
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