Receptor
PDB id Resolution Class Description Source Keywords
1OJ8 1.7 Å EC: 3.-.-.- NOVEL AND RETRO BINDING MODES IN CYTOTOXIC RIBONUCLEASES FROM RANA CATESBEIANA OF TWO CRYSTAL STRUCTURES COMPLEXED W ITH D(APCPGPA) AND (2',5'CPG) RANA CATESBEIANA CYTOTOXIC RIBONUCLEASES ANTI-TUMOR ACTIVITY SIALIC BINDING AND NUCLEOTIDE BINDING HYDROLASE
Ref.: RETRO AND NOVEL BINDING MODES IN CYTOTOXIC RIBONUCLEASES FROM RANA CATESBEIANA OF TWO CRYSTAL STRUCTURES COMPLEXED WITH (2',5'CPG) AND D(APCPGPA) TO BE PUBLISHED
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
DA DC DG DA B:301;
Valid;
none;
submit data
1243.8 n/a P(=O)...
SO4 A:201;
A:202;
Invalid;
Invalid;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1OJ8 1.7 Å EC: 3.-.-.- NOVEL AND RETRO BINDING MODES IN CYTOTOXIC RIBONUCLEASES FROM RANA CATESBEIANA OF TWO CRYSTAL STRUCTURES COMPLEXED W ITH D(APCPGPA) AND (2',5'CPG) RANA CATESBEIANA CYTOTOXIC RIBONUCLEASES ANTI-TUMOR ACTIVITY SIALIC BINDING AND NUCLEOTIDE BINDING HYDROLASE
Ref.: RETRO AND NOVEL BINDING MODES IN CYTOTOXIC RIBONUCLEASES FROM RANA CATESBEIANA OF TWO CRYSTAL STRUCTURES COMPLEXED WITH (2',5'CPG) AND D(APCPGPA) TO BE PUBLISHED
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 253 families.
1 1OJ8 - DA DC DG DA n/a n/a
2 1OJ1 - CG2 C19 H25 N8 O12 P c1nc2c(n1[....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1OJ8 - DA DC DG DA n/a n/a
2 1OJ1 - CG2 C19 H25 N8 O12 P c1nc2c(n1[....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1OJ8 - DA DC DG DA n/a n/a
2 1OJ1 - CG2 C19 H25 N8 O12 P c1nc2c(n1[....
3 2I5S - DA DU DG DA n/a n/a
4 2GMK Ki = 590 uM AMP C10 H14 N5 O7 P c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: DA DC DG DA; Similar ligands found: 38
No: Ligand ECFP6 Tc MDL keys Tc
1 DA DC DG DA 1 1
2 DG DA DC DG 0.877698 0.963855
3 DC DG DT DA 0.81457 0.941176
4 DT DA DC DG 0.807947 0.941176
5 DC DG DA DC 0.79021 0.987654
6 DG DC 0.748201 0.987654
7 DC DG 0.683453 0.951807
8 DA DT DA DA 0.601307 0.860465
9 CGP 0.574324 0.951807
10 DG DG 0.553957 0.927711
11 DU DU DU DU BRU DA DU 0.548193 0.840909
12 CPA 0.547297 0.915663
13 3PD UM3 0.526316 0.927711
14 DU DU DU DU BRU DG DU 0.521472 0.875
15 G G G C 0.481481 0.927711
16 DA DU DG DA 0.471338 0.894118
17 G C C C 0.467066 0.915663
18 G C 0.444444 0.892857
19 A G U 0.443182 0.904762
20 DG 0.442029 0.925926
21 DGP 0.442029 0.925926
22 G G G RPC 0.435583 0.914634
23 A G 0.432927 0.879518
24 G A A A 0.432927 0.869048
25 A G U U 0.430939 0.904762
26 U A G G 0.430303 0.879518
27 A G C C 0.426035 0.903614
28 APC G U 0.42515 0.879518
29 DGI 0.423611 0.914634
30 ADS THS THS THS 0.422619 0.802198
31 DC DC DT DG 0.422078 0.776471
32 G G 0.407643 0.891566
33 DT MA7 DT 0.40678 0.862069
34 D5M 0.405797 0.851852
35 DA 0.405797 0.851852
36 AS 0.402878 0.811765
37 DGT 0.402685 0.914634
38 U A A U 0.4 0.879518
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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