Receptor
PDB id Resolution Class Description Source Keywords
1OYB 2 Å EC: 1.6.99.1 OLD YELLOW ENZYME AT 2 ANGSTROMS RESOLUTION: OVERALL STRUCTURE, LIGAND BINDING AND COMPARISON WITH RELATED F LAVOPROTEINS SACCHAROMYCES PASTORIANUS OXIDOREDUCTASE(FLAVOPROTEIN)
Ref.: OLD YELLOW ENZYME AT 2 A RESOLUTION: OVERALL STRUCTURE, LIGAND BINDING, AND COMPARISON WITH RELATED FLAVOPROTEINS. STRUCTURE V. 2 1089 1994
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FMN A:401;
Valid;
none;
submit data
456.344 C17 H21 N4 O9 P Cc1cc...
HBA A:402;
Valid;
none;
submit data
122.121 C7 H6 O2 c1cc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1OYB 2 Å EC: 1.6.99.1 OLD YELLOW ENZYME AT 2 ANGSTROMS RESOLUTION: OVERALL STRUCTURE, LIGAND BINDING AND COMPARISON WITH RELATED F LAVOPROTEINS SACCHAROMYCES PASTORIANUS OXIDOREDUCTASE(FLAVOPROTEIN)
Ref.: OLD YELLOW ENZYME AT 2 A RESOLUTION: OVERALL STRUCTURE, LIGAND BINDING, AND COMPARISON WITH RELATED FLAVOPROTEINS. STRUCTURE V. 2 1089 1994
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 8 families.
1 1OYB - HBA C7 H6 O2 c1cc(ccc1C....
2 1OYC - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 1BWK - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
4 1OYA - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
70% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 1OYB - HBA C7 H6 O2 c1cc(ccc1C....
2 1OYC - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 1BWK - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
4 1OYA - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
5 4TMB - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
6 4TMC - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
7 4RNV - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
50% Homology Family (63)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1H60 Kd = 20 uM STR C21 H30 O2 CC(=O)[C@H....
2 3P7Y - P7Y C8 H7 N O3 c1ccc(c(c1....
3 1H50 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
4 3P67 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
5 3KFT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
6 1VYP Kd = 0.07 uM TNF C6 H3 N3 O7 c1c(cc(c(c....
7 3P74 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
8 1GVQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
9 5LGX - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
10 2ABA Kd = 0.7 uM STR C21 H30 O2 CC(=O)[C@H....
11 1VYS Kd = 0.24 uM TNF C6 H3 N3 O7 c1c(cc(c(c....
12 1GVO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
13 3P81 - P81 C8 H7 N O3 c1cc(ccc1/....
14 5LGZ - FNR C17 H23 N4 O9 P Cc1cc2c(cc....
15 3P62 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 3P82 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 1GVR - TNL C7 H5 N3 O6 Cc1c(cc(cc....
18 1H63 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
19 1H62 Kd = 17 uM ANB C19 H24 O2 C[C@]12CC[....
20 1GVS - TNF C6 H3 N3 O7 c1c(cc(c(c....
21 1H61 Kd = 13 uM PDN C21 H26 O5 C[C@]12CC(....
22 3P80 - P80 C8 H7 N O3 c1cc(cc(c1....
23 2ABB - IPA C3 H8 O CC(C)O
24 1VYR Kd = 5.4 uM TNF C6 H3 N3 O7 c1c(cc(c(c....
25 1H51 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
26 2GQ9 - HBA C7 H6 O2 c1cc(ccc1C....
27 2GQ8 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
28 2GOU - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
29 2GQA - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
30 2HS8 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
31 2HS6 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
32 3HGO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
33 2HSA - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
34 3HGS - PHB C7 H6 O3 c1cc(ccc1C....
35 1OYB - HBA C7 H6 O2 c1cc(ccc1C....
36 1OYC - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
37 1BWK - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
38 1OYA - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
39 4M5P - MLA C3 H4 O4 C(C(=O)O)C....
40 4TMB - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
41 4TMC - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
42 1ICS - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
43 3HGR - PHB C7 H6 O3 c1cc(ccc1C....
44 1ICP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
45 1ICQ - OPD C18 H28 O3 CCC=CC[C@@....
46 3ATY - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
47 3ATZ - HBA C7 H6 O2 c1cc(ccc1C....
48 1Q45 - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
49 2Q3O - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
50 2R14 Kd = 0.63 mM TXD C21 H31 N7 O14 P2 c1nc(c2c(n....
51 3GX9 - TXD C21 H31 N7 O14 P2 c1nc(c2c(n....
52 1GWJ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
53 1VJI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
54 2Q3R - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
55 4JIQ Kd = 0.73 mM 1L5 C9 H9 N O2 C/C(=CN(=O....
56 4JIP - HBA C7 H6 O2 c1cc(ccc1C....
57 4JIC - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
58 5N6G - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
59 4QNW - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
60 4RNX - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
61 4RNV - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
62 4RNW - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
63 4A3U - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FMN; Similar ligands found: 16
No: Ligand ECFP6 Tc MDL keys Tc
1 FMN 1 1
2 RBF 0.75641 0.876712
3 RS3 0.571429 0.831169
4 FAS 0.543307 0.876543
5 FAD 0.543307 0.876543
6 FAE 0.539062 0.865854
7 DAL FAD PER 0.5 0.833333
8 LFN 0.475 0.643836
9 C3F 0.473684 0.74359
10 CF4 0.463918 0.734177
11 FAY 0.446043 0.864198
12 FNR 0.444444 0.909091
13 RFL 0.442857 0.845238
14 4LS 0.411215 0.875
15 1VY 0.406593 0.769231
16 DLZ 0.404494 0.782051
Ligand no: 2; Ligand: HBA; Similar ligands found: 5
No: Ligand ECFP6 Tc MDL keys Tc
1 HBA 1 1
2 4VP 0.481481 0.733333
3 HQE 0.428571 0.857143
4 EN1 0.411765 0.619048
5 HC4 0.411765 0.764706
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1OYB; Ligand: HBA; Similar sites found: 295
This union binding pocket(no: 1) in the query (biounit: 1oyb.bio1) has 28 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1UO5 PIH 0.000371 0.54016 None
2 1TUV VK3 0.003715 0.46459 None
3 2NCD ADP 0.01226 0.41353 1.25
4 2CHN NGT 0.01413 0.40799 1.25
5 1G0N NDP 0.001606 0.40364 1.41343
6 1G0N PHH 0.002369 0.4015 1.41343
7 4CS4 AXZ 0.0001152 0.44578 1.45985
8 4CS4 ANP 0.0002207 0.42953 1.45985
9 1F76 FMN 0.0004411 0.43462 1.4881
10 2GSD NAD 0.0006104 0.41319 1.5
11 3Q9T FAY 0.0008945 0.41166 1.5
12 1X1T NAD 0.002981 0.41866 1.53846
13 3F8C HT1 0.01346 0.41171 1.5873
14 2V6O FAD 0.002025 0.42574 1.75
15 2CKM AA7 0.001776 0.40549 1.75
16 3NKS FAD 0.001682 0.40187 1.75
17 1R6D NAD 0.0022 0.41253 1.78042
18 1JQI FAD 0.0001848 0.43064 1.80412
19 2Z6I FMN 0.000301 0.45969 1.80723
20 4CKU P2F 0.0006654 0.42525 1.82371
21 1LDM NAD 0.002914 0.41509 1.82371
22 2R5T ANP 0.002039 0.40201 1.87668
23 1VHN FMN 0.000006034 0.5758 1.88679
24 2G86 UMP 0.002334 0.40831 1.89873
25 2AE2 PTO 0.00008233 0.44685 1.92308
26 2AE2 NAP 0.00008233 0.44685 1.92308
27 3MAG 3MA 0.03941 0.41791 1.9544
28 3MAG SAH 0.001968 0.40613 1.9544
29 3ZPG 5GP 0.006239 0.45296 2
30 2J07 HDF 0.000417 0.43286 2
31 2J07 FAD 0.000417 0.43286 2
32 3WE0 FAD 0.0004229 0.42759 2
33 4DYO SD4 0.003509 0.42681 2
34 2C5S AMP 0.007515 0.41299 2
35 1D6H COA 0.0002378 0.43564 2.06718
36 1NJR XYL 0.0006413 0.40256 2.11268
37 2ZRU FMN 0.000003768 0.46358 2.17391
38 1LTH NAD 0.003324 0.41033 2.19436
39 4OYA 1VE 0.004469 0.4241 2.25
40 4R33 TRP 0.0004862 0.41358 2.25
41 4R33 SAH 0.0004862 0.41358 2.25
42 1OVD ORO 0.0001326 0.41573 2.2508
43 3TN7 NJP 0.0006483 0.40695 2.33463
44 1PEA ACM 0.01325 0.42914 2.33766
45 3UXL CFI 0.01136 0.4057 2.34987
46 1V6A TRE 0.01302 0.41236 2.40964
47 2YPI PGA 0.0123 0.41864 2.42915
48 4I9A NCN 0.003898 0.42674 2.43056
49 3VKC FPQ 0.003055 0.42071 2.44755
50 2Z9I GLY ALA THR VAL 0.03575 0.40369 2.46914
51 1TV5 FMN 0.001036 0.42377 2.5
52 1ZK7 FAD 0.0009744 0.41792 2.5
53 4JWX 1N4 0.007789 0.41715 2.5
54 2YVF NAD 0.005035 0.40562 2.5
55 2YVF FAD 0.004806 0.40562 2.5
56 1TV5 ORO 0.005227 0.4004 2.5
57 3A2Y TS5 0.00162 0.41694 2.53807
58 1T8U UAP SGN IDS SGN 0.002032 0.40042 2.57353
59 1SQ5 PAU 0.0006215 0.46443 2.5974
60 1SQ5 ADP 0.006346 0.40712 2.5974
61 3H86 AP5 0.004527 0.40169 2.60417
62 2DTX BMA 0.00008859 0.44458 2.65152
63 4NAE 1GP 0.000273 0.52231 2.66667
64 3SHR CMP 0.005258 0.41476 2.67559
65 4KOA NDP 0.003961 0.40291 2.7027
66 9LDT NAD 0.0002198 0.42121 2.71084
67 1V35 NAI 0.001146 0.41157 2.73556
68 1OFD FMN 0.000006629 0.52382 2.75
69 2XDQ MGX 0.0003107 0.52017 2.75
70 1OFD AKG 0.000008746 0.5157 2.75
71 2F2U M77 0.0001745 0.47458 2.75
72 4FWE FAD 0.00009796 0.44804 2.75
73 1H82 GZZ 0.0002895 0.44699 2.75
74 4CW5 FMN 0.00005389 0.44165 2.75
75 1UXG FUM 0.0008232 0.41279 2.75
76 3OGV PTQ 0.01306 0.4061 2.75
77 3L0E G58 0.00007536 0.42846 2.7668
78 2B4G FMN 0.00009208 0.46479 2.83912
79 1H6W SER LEU ASN TYR ILE ILE LYS VAL LYS GLU 0.004089 0.40073 2.88462
80 2NLI LAC 0.000001003 0.52004 2.98913
81 2NLI FMN 0.000008739 0.48916 2.98913
82 3W9Z FMN 0.0000002266 0.52182 3
83 4RJK PYR 0.000624 0.49497 3
84 4O8A FAD 0.0002065 0.42203 3
85 1TIW FAD 0.0008201 0.41284 3
86 1TIW TFB 0.0008201 0.41284 3
87 1Q3Q ANP 0.003715 0.40724 3
88 3HAZ FAD 0.0009002 0.40262 3
89 1XHL NDP 0.0004984 0.41185 3.0303
90 3NFZ 3NF 0.002513 0.42293 3.0581
91 1QO0 BMD 0.01973 0.40923 3.06122
92 2YBQ UP2 0.001574 0.40161 3.08219
93 4KQI RBZ 0.000137 0.42744 3.08989
94 4KQI NIO 0.000137 0.42744 3.08989
95 1GS5 ANP 0.001037 0.40347 3.10078
96 1GS5 NLG 0.001037 0.40347 3.10078
97 1QD0 RR6 0.002881 0.4206 3.125
98 3ICC NAP 0.0007512 0.40641 3.13725
99 1GSA GSH 0.002129 0.40297 3.16456
100 3EXS 5RP 0.002755 0.45113 3.16742
101 3MJY FMN 0.00006398 0.47948 3.17919
102 2Q1S NAI 0.001473 0.41014 3.18302
103 3C3N FMN 0.0002584 0.41017 3.20513
104 2Z6J FMN 0.0001323 0.4621 3.25
105 2AQJ TRP 0.0003979 0.44068 3.25
106 2AQJ FAD 0.0004356 0.44017 3.25
107 1T26 GBD 0.001783 0.43663 3.25
108 3WO0 ALA 0.0005661 0.41547 3.25
109 3WO0 ADP 0.0005661 0.41547 3.25
110 1K97 CIR 0.0103 0.40427 3.25
111 1K97 ASP 0.0103 0.40427 3.25
112 2PP3 LGT 0.005301 0.40602 3.26633
113 1O68 KIV 0.01179 0.42841 3.27273
114 2GYI HYA 0.00751 0.40101 3.36788
115 3NIP 16D 0.02659 0.41115 3.37423
116 1GEE NAD 0.000139 0.40339 3.44828
117 3LTW HLZ 0.0009845 0.46927 3.5
118 4ORM ORO 0.001237 0.45537 3.5
119 1GV0 NAD 0.00007775 0.43328 3.5
120 4AT0 FAD 0.0003816 0.43315 3.5
121 1WDA BAG 0.007571 0.41286 3.5
122 1Z4V DAN 0.001282 0.40064 3.5
123 2RDT 2RD 0.00002899 0.49155 3.61757
124 2RDT FMN 0.00001655 0.48927 3.61757
125 1C1L GAL BGC 0.00296 0.45405 3.64964
126 3B0P FMN 0.00000001808 0.6787 3.71429
127 4LHM AZZ 0.004226 0.43415 3.75
128 3F3E LEU 0.0002694 0.42682 3.75
129 1MZV AMP 0.001015 0.44366 3.82979
130 4USQ FAD 0.00139 0.40085 3.87812
131 4UTU LRY 0.003509 0.43688 3.93013
132 2E1A MSE 0.008198 0.41141 4
133 2ZB3 NDP 0.0007675 0.40178 4
134 4W6Z 8ID 0.001512 0.40216 4.03458
135 3LZW NAP 0.00462 0.40478 4.21687
136 3S9K CIT 0.001061 0.51105 4.23729
137 2VBQ BSJ 0.0004871 0.41491 4.24242
138 4K30 NLG 0.006951 0.41929 4.25
139 1I2B USQ 0.003593 0.40621 4.25
140 1I2B NAD 0.003593 0.40621 4.25
141 1I2B UPG 0.003593 0.40621 4.25
142 2QA1 FAD 0.001261 0.4034 4.25
143 2GGH NLQ 0.001367 0.4047 4.26667
144 3DER ALA LYS 0.0001109 0.41252 4.34783
145 1C0I BE2 0.0007325 0.42194 4.40771
146 1C0I FAD 0.0007325 0.42194 4.40771
147 4AXD ANP 0.000695 0.41269 4.5
148 4GYW UDP 0.0005208 0.41127 4.5
149 3ODU ITD 0.03626 0.40255 4.5
150 3RO7 TDR 0.01738 0.40129 4.5283
151 1Q11 TYE 0.003848 0.43036 4.56989
152 1EP2 FMN 0.00005024 0.4687 4.5977
153 1EP2 ORO 0.00005777 0.43488 4.5977
154 4QN6 LNV 0.001821 0.4008 4.60358
155 1NN5 ANP 0.0007794 0.40307 4.65116
156 1NN5 2DT 0.0007794 0.40307 4.65116
157 3E8N VRA 0.001313 0.41073 4.69208
158 3E8N ATP 0.001313 0.41073 4.69208
159 4A91 GLU 0.01492 0.40825 4.69799
160 1UDB NAD 0.001942 0.41266 4.73373
161 1UDB UFG 0.001942 0.41266 4.73373
162 2O2C G6Q 0.005682 0.40095 4.75
163 4IAE 1DX 0.001079 0.41976 4.7619
164 3DGB MUC 0.004386 0.41343 4.97382
165 1CHM CMS 0.02512 0.41259 5
166 4N02 FNR 0.00001376 0.48747 5.04202
167 2Q2V NAD 0.0004758 0.41387 5.09804
168 3PVT 3HC 0.001268 0.40573 5.14469
169 3BW2 FMN 0.00003533 0.4635 5.14905
170 3P3N AKG 0.0002625 0.49568 5.15759
171 2WA4 069 0.008972 0.40119 5.15759
172 1ZK4 NAP 0.0007481 0.44337 5.17928
173 1ZK4 AC0 0.0007481 0.44337 5.17928
174 2GJN FMN 0.0001105 0.46554 5.18293
175 2GJN NIS 0.0001501 0.45094 5.18293
176 1I2L DCS 0.0009431 0.41709 5.20446
177 3IU9 T07 0.002707 0.41262 5.20833
178 3PJU C2E 0.0001778 0.41743 5.22088
179 1QF5 RPL 0.0005221 0.4287 5.25
180 1QF5 GDP 0.0005221 0.4287 5.25
181 3QV9 QV7 0.007537 0.42296 5.25
182 1DLJ NAI 0.001277 0.4178 5.25
183 1OX5 1PR 0.001346 0.4144 5.25
184 2V68 CAP 0.009212 0.40317 5.25
185 1DLJ UGA 0.003767 0.40231 5.25
186 1RZM PEP 0.002634 0.43745 5.32544
187 1RZM E4P 0.02182 0.41051 5.32544
188 4PLG OXM 0.0003609 0.42284 5.38922
189 4PLG NAI 0.0003609 0.42284 5.38922
190 1JA9 NDP 0.003193 0.41636 5.47445
191 3UEC ALA ARG TPO LYS 0.004572 0.44504 5.47945
192 3I0O SMI 0.002672 0.44302 5.60472
193 3I0O ADP 0.007375 0.4088 5.60472
194 1Y9Q MED 0.001001 0.46894 5.72917
195 3IAE D7K 0.0003058 0.41686 5.75
196 4PVV HO4 0.001571 0.40395 5.8642
197 1UF5 CDT 0.001465 0.43722 5.94059
198 2IXB NAD 0.000424 0.41255 6
199 1I0Z OXM 0.01665 0.43086 6.00601
200 1I0Z NAI 0.0001001 0.41274 6.00601
201 1RYI GOA 0.0002732 0.4337 6.02094
202 1RYI FAD 0.000937 0.41436 6.02094
203 1F1V DHY 0.005847 0.41755 6.19195
204 4F8L GAL 0.02199 0.4399 6.2069
205 3FC4 EDO 0.0005383 0.43287 6.25
206 2C7G FAD 0.001255 0.42229 6.25
207 2C7G ODP 0.002487 0.41155 6.25
208 1B8U NAD 0.0001633 0.40373 6.25
209 2ORV 4TA 0.0009051 0.40302 6.41026
210 1N9L FMN 0.0002544 0.44117 6.42202
211 2RHQ GAX 0.0004239 0.42079 6.46258
212 2QLX RM4 0.01129 0.42626 6.48148
213 3F81 STT 0.00818 0.44687 6.55738
214 2Q37 3AL 0.003351 0.43864 6.62983
215 2Z9V PXM 0.0007393 0.46119 6.63265
216 2V7T SAH 0.005385 0.41736 6.68896
217 3T31 FAD 0.001041 0.42418 6.75
218 3T31 DCQ 0.001164 0.42418 6.75
219 1TDF NAP 0.003673 0.4155 6.96203
220 1TDF FAD 0.002046 0.40838 6.96203
221 3QDT A2G GAL 0.002582 0.46442 6.99301
222 3OIX FMN 0.0004937 0.4243 7
223 3I28 34N 0.002882 0.40353 7
224 2QQ0 TMP 0.00009248 0.40823 7.06522
225 2QQ0 ADP 0.00009248 0.40823 7.06522
226 2QQ0 ANP 0.0001387 0.4041 7.06522
227 1TB3 FMN 0.0000008979 0.54959 7.10227
228 1P4C FMN 0.00001814 0.49965 7.10526
229 1EYE PMM 0.0006286 0.44657 7.14286
230 1Y42 TYR 0.002823 0.43615 7.14286
231 1VDC FAD 0.001583 0.41294 7.20721
232 1AL8 FMN 0.000004137 0.53244 7.24234
233 1AL8 DHP 0.00002281 0.46931 7.24234
234 2RHW C0E 0.002026 0.41908 7.42049
235 1GTE FMN 0.0001186 0.4253 7.5
236 3CF6 SP1 0.00198 0.41796 7.78443
237 4Q3S X7A 0.0008754 0.40518 7.79221
238 1G8S MET 0.001084 0.46734 7.82609
239 1P1M MET 0.0009715 0.40905 8
240 4COQ SAN 0.006031 0.43303 8.09717
241 2F6U CIT 0.006113 0.44343 8.11966
242 2JGS BTN 0.01486 0.40736 8.46154
243 2V5E SCR 0.001914 0.48906 8.5
244 3RF4 FUN 0.005577 0.42341 8.62069
245 3ZV6 4HB 0.002457 0.40199 8.75
246 3ZV6 NAD 0.002286 0.40199 8.75
247 2IYG FMN 0.0001447 0.47161 8.87097
248 1YRX FMN 0.003812 0.41149 9.09091
249 1T0S BML 0.0003403 0.50801 9.30233
250 1SB8 UD2 0.001525 0.41698 9.375
251 1SB8 NAD 0.001362 0.41507 9.375
252 2QCX PF1 0.00702 0.42433 9.5057
253 2D0V PQQ 0.000117 0.40592 9.72222
254 3BY8 MLT 0.0001393 0.51734 9.85915
255 4BJZ P3A 0.007049 0.40566 9.90566
256 4BJZ FAD 0.007049 0.40566 9.90566
257 1OAA OAA 0.001808 0.40727 10.0386
258 4DEM YS4 0.003988 0.41888 10.1333
259 1XOC VAL ASP SER LYS ASN THR SER SER TRP 0.001548 0.40634 10.5
260 2YC5 6BC 0.0006115 0.41316 10.5263
261 1B63 ANP 0.001786 0.40043 10.8108
262 1EJE FMN 0.001305 0.41619 10.9375
263 1W7J ADP BEF 0.001183 0.42187 11.2583
264 2PR5 FMN 0.0001174 0.45297 11.3636
265 1KBI FMN 0.0000000004695 0.58248 11.5
266 1KBJ FMN 0.0000008223 0.53905 11.5
267 1KBI PYR 0.000001299 0.53697 11.5
268 2Y7P SAL 0.001595 0.44682 11.9266
269 1FW1 GSH 0.0008169 0.43703 12.037
270 1ULE GLA GAL NAG 0.01658 0.42428 13.3333
271 1NNU TCT 0.003794 0.41965 13.3333
272 1SS4 GSH 0.002008 0.49694 13.7255
273 1SS4 CIT 0.0007163 0.4953 13.7255
274 2EWM NAD 0.0002352 0.42032 14.0562
275 1M5B BN1 0.002587 0.41253 14.0684
276 2X1L MET 0.03951 0.40063 14.75
277 4CCO OGA 0.004246 0.42851 15
278 1YOA FMN 0.01056 0.458 15.0943
279 1MXI SAH 0.002179 0.40837 15.625
280 4Q4K FMN 0.00005422 0.46974 15.75
281 3KJQ B94 0.0003254 0.45779 15.7895
282 3PLN U5P 0.01715 0.40233 17
283 4F4S EFO 0.0008555 0.45846 17.1053
284 2XD9 XD9 0.01358 0.41691 19.1617
285 2E2R 2OH 0.000482 0.41505 22.1311
286 2A2X NA9 0.001909 0.41038 23.5294
287 1O9U ADZ 0.004534 0.46012 27.7778
288 1PS9 FMN 0.0000004212 0.53048 30.75
289 1Z42 FMN 0.00000001471 0.70294 32.8402
290 1Z44 FMN 0.000000009741 0.70114 32.8402
291 1Z41 FMN 0.0000000087 0.54286 32.8402
292 1Z48 FMN 0.000000008507 0.5426 32.8402
293 1Z44 NPO 0.03151 0.40585 32.8402
294 3KPE TM3 0.0302 0.40062 35.2941
295 1DJN FMN 0.0000004415 0.53906 40
Pocket No.: 2; Query (leader) PDB : 1OYB; Ligand: FMN; Similar sites found: 338
This union binding pocket(no: 2) in the query (biounit: 1oyb.bio1) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1UO5 PIH 0.0002971 0.54016 None
2 1TUV VK3 0.006553 0.44729 None
3 2CHN NGT 0.01197 0.40705 1.25
4 4CS4 AXZ 0.0002 0.44945 1.45985
5 4CS4 ANP 0.0003698 0.43332 1.45985
6 1F76 FMN 0.0002613 0.4565 1.4881
7 2GSD NAD 0.0005251 0.42569 1.5
8 2XVE FAD 0.003624 0.41912 1.5
9 2XVF FAD 0.003127 0.4022 1.5
10 1KOL NAD 0.001322 0.41358 1.50754
11 1X1T NAD 0.006691 0.41449 1.53846
12 3F8C HT1 0.01072 0.41171 1.5873
13 1TB4 PEJ 0.0005237 0.41876 1.61725
14 2V6O FAD 0.004538 0.42192 1.75
15 4KXV TDP DX5 0.001585 0.41325 1.75
16 3NKS FAD 0.00154 0.41253 1.75
17 2RGH FAD 0.003164 0.40523 1.75
18 1HV9 UD1 0.005531 0.40075 1.75
19 2CKM AA7 0.004647 0.40054 1.75
20 1R6D NAD 0.002127 0.42216 1.78042
21 1R6D DAU 0.002096 0.42156 1.78042
22 4NE2 SH2 0.001991 0.40645 1.79641
23 2Z6I FMN 0.0002224 0.45969 1.80723
24 4CKU P2F 0.001537 0.42282 1.82371
25 1VHN FMN 0.000004408 0.5758 1.88679
26 2AE2 PTO 0.0002981 0.44011 1.92308
27 2AE2 NAP 0.0002981 0.44011 1.92308
28 1RKD RIB 0.001423 0.40746 1.94175
29 1RKD ADP 0.001423 0.40746 1.94175
30 2YPO PHE 0.001225 0.40682 1.94805
31 3MAG 3MA 0.002604 0.47703 1.9544
32 3GWT 066 0.001227 0.40821 1.983
33 3ZPG 5GP 0.007007 0.44581 2
34 2J07 FAD 0.0004098 0.44382 2
35 2J07 HDF 0.0004098 0.44382 2
36 4DYO SD4 0.00269 0.42681 2
37 3WE0 FAD 0.001046 0.42475 2
38 2C5S AMP 0.004855 0.41627 2
39 2CSN CKI 0.000945 0.40423 2.0202
40 4GQB 0XU 0.004981 0.40825 2.03488
41 1D6H COA 0.00008724 0.46184 2.06718
42 2P2V CSF 0.0006812 0.43702 2.08333
43 1NJR XYL 0.001049 0.406 2.11268
44 1IUP ALQ 0.0006502 0.41572 2.12766
45 4FR3 0V4 0.011 0.40592 2.13675
46 2ZRU FMN 0.000002365 0.45545 2.17391
47 1LTH NAD 0.001412 0.43244 2.19436
48 3B96 FAD 0.001254 0.41553 2.21465
49 3OND NAD 0.0005187 0.43928 2.25
50 3OND ADN 0.0005187 0.43928 2.25
51 4OYA 1VE 0.01479 0.41243 2.25
52 1O0S NAI 0.0004527 0.41071 2.25
53 4R33 TRP 0.001611 0.40701 2.25
54 4R33 SAH 0.001611 0.40701 2.25
55 3NYQ AMP 0.001937 0.40437 2.25
56 1OVD ORO 0.00007146 0.41328 2.2508
57 3OIG NAD 0.006023 0.40974 2.25564
58 1PEA ACM 0.0108 0.42914 2.33766
59 3UXL CFI 0.01151 0.41303 2.34987
60 4IMG NGF 0.0004121 0.40157 2.38908
61 1V6A TRE 0.01036 0.41236 2.40964
62 2YPI PGA 0.01003 0.41864 2.42915
63 4I9A NCN 0.003062 0.42674 2.43056
64 3VKC FPQ 0.007051 0.40058 2.44755
65 2Z9I GLY ALA THR VAL 0.03035 0.40369 2.46914
66 1TV5 FMN 0.0005533 0.4241 2.5
67 4JWX 1N4 0.006828 0.41507 2.5
68 2NXW TPP 0.001102 0.4111 2.5
69 2YVF FAD 0.009897 0.40263 2.5
70 1ZK7 FAD 0.005939 0.40058 2.5
71 1SQ5 PAU 0.0153 0.40015 2.5974
72 1NZY BCA 0.0007366 0.41092 2.60223
73 2DTX BMA 0.002637 0.40687 2.65152
74 3PFG TLO 0.002243 0.41031 2.6616
75 3PFG SAM 0.002243 0.41031 2.6616
76 4NAE 1GP 0.0002169 0.52231 2.66667
77 3SHR CMP 0.003538 0.41699 2.67559
78 4KOA NDP 0.002946 0.40277 2.7027
79 1Q0H NDP 0.005512 0.40343 2.70936
80 9LDB NAD 0.0005846 0.41869 2.71084
81 9LDT NAD 0.0007527 0.41511 2.71084
82 1V35 NAI 0.0005468 0.43227 2.73556
83 1OFD FMN 0.000004019 0.54772 2.75
84 1OFD AKG 0.000005565 0.53838 2.75
85 4CW5 FMN 0.00005328 0.46062 2.75
86 1H82 FAD 0.0002313 0.45901 2.75
87 2F2U M77 0.001141 0.43655 2.75
88 1H82 GZZ 0.001289 0.43463 2.75
89 1UXG FUM 0.0004522 0.43161 2.75
90 2XDQ MGX 0.0189 0.42375 2.75
91 1REO FAD 0.0008912 0.42282 2.75
92 4FWE FAD 0.004832 0.40186 2.75
93 4IXW IXW 0.01188 0.40027 2.75591
94 2B4G FMN 0.00004246 0.49077 2.83912
95 1H6W SER LEU ASN TYR ILE ILE LYS VAL LYS GLU 0.003269 0.41266 2.88462
96 3S7O LBV 0.001306 0.40732 2.91545
97 2NLI LAC 0.0000008121 0.5397 2.98913
98 2NLI FMN 0.000009394 0.51134 2.98913
99 3W9Z FMN 0.0000001531 0.5555 3
100 4RJK PYR 0.0004877 0.49497 3
101 1Q3Q ANP 0.0009594 0.4369 3
102 3HAZ FAD 0.0008226 0.41386 3
103 1TIW TFB 0.002569 0.40617 3
104 1TIW FAD 0.002569 0.40617 3
105 1YBH FAD 0.002784 0.40607 3
106 2XCG XCG 0.001644 0.40267 3
107 3NFZ 3NF 0.003247 0.4138 3.0581
108 1QO0 BMD 0.02287 0.40203 3.06122
109 2YBQ UP2 0.002073 0.40705 3.08219
110 4JK3 NAD 0.001672 0.401 3.0888
111 4KQI RBZ 0.00006721 0.44927 3.08989
112 4KQI NIO 0.00006721 0.44927 3.08989
113 1QD0 RR6 0.002165 0.4206 3.125
114 1GSA GSH 0.001419 0.41813 3.16456
115 1GSA ADP 0.004616 0.40613 3.16456
116 3EXS 5RP 0.0022 0.45113 3.16742
117 3SJ7 NDP 0.001045 0.40758 3.1746
118 3MJY FMN 0.00008832 0.48605 3.17919
119 2Q1S NAI 0.002281 0.41309 3.18302
120 3C3N FMN 0.000156 0.40703 3.20513
121 2Z6J FMN 0.00008112 0.48272 3.25
122 2AQJ FAD 0.0001731 0.46525 3.25
123 2AQJ TRP 0.0001786 0.4639 3.25
124 1T26 NAI 0.001768 0.44608 3.25
125 1T26 GBD 0.001768 0.44608 3.25
126 1LVL FAD 0.0015 0.41935 3.25
127 3WO0 ALA 0.001094 0.41632 3.25
128 3WO0 ADP 0.001094 0.41632 3.25
129 1K97 ASP 0.01298 0.40811 3.25
130 1K97 CIR 0.01298 0.40811 3.25
131 1O68 KIV 0.009705 0.42841 3.27273
132 3I6B KDO 0.000005349 0.40991 3.33333
133 3L02 CP 0.001535 0.40638 3.34262
134 3L02 SN0 0.001535 0.40638 3.34262
135 2GYI HYA 0.0008944 0.4426 3.36788
136 1A27 NAP 0.000633 0.4161 3.46021
137 4ORM ORO 0.0007233 0.47568 3.5
138 3LTW HLZ 0.002114 0.44911 3.5
139 1GV0 NAD 0.00007765 0.4456 3.5
140 1WDA BAG 0.001506 0.43715 3.5
141 3UH0 TSB 0.000261 0.41816 3.5
142 1Z4V DAN 0.0009191 0.41503 3.5
143 3MB5 SAM 0.002695 0.41603 3.52941
144 1MDZ DCS 0.002077 0.40337 3.56234
145 1UJ2 ADP 0.001125 0.40184 3.57143
146 2RDT 2RD 0.00002925 0.50462 3.61757
147 2RDT FMN 0.00001996 0.50229 3.61757
148 1C1L GAL BGC 0.009697 0.42497 3.64964
149 3B0P FMN 0.00000001249 0.67788 3.71429
150 3F3E LEU 0.0002343 0.43997 3.75
151 3D2M COA 0.004057 0.43415 3.75
152 1G41 ADP 0.002134 0.42291 3.75
153 1H6C SIN 0.001685 0.41346 3.75
154 1H6C NDP 0.001485 0.41306 3.75
155 1Z45 NAD 0.001116 0.40812 3.75
156 4LHM AZZ 0.013 0.40801 3.75
157 4PU6 ASP 0.02767 0.40466 3.75
158 1V7R CIT 0.006709 0.45513 3.76344
159 4NTD FAD 0.001283 0.41634 3.82353
160 1MZV AMP 0.0007562 0.44366 3.82979
161 4QN7 G39 0.002062 0.40594 3.84615
162 1RYD NDP 0.003214 0.4018 3.87597
163 4UTU LRY 0.003149 0.43434 3.93013
164 2E1A MSE 0.0005153 0.45626 4
165 2ZB3 NDP 0.0004087 0.4207 4
166 2NVK FAD 0.003508 0.40471 4
167 4W6Z 8ID 0.002553 0.40402 4.03458
168 1HYE NAP 0.0007686 0.40355 4.15335
169 3ZEI AWH 0.000531 0.41704 4.19355
170 3LZW NAP 0.00409 0.41509 4.21687
171 3S9K CIT 0.005944 0.48113 4.23729
172 1I2B NAD 0.0005987 0.44255 4.25
173 1I2B USQ 0.0005987 0.44255 4.25
174 1I2B UPG 0.0005987 0.44255 4.25
175 2QA1 FAD 0.0009839 0.41663 4.25
176 4K30 NLG 0.008048 0.41203 4.25
177 3I8P 840 0.002459 0.40963 4.25
178 2GGH NLQ 0.002642 0.40466 4.26667
179 3JYN NDP 0.001883 0.40477 4.30769
180 2ALG DAO 0.0005482 0.40208 4.34783
181 2ALG HP6 0.0005482 0.40208 4.34783
182 2YHW BM3 0.001833 0.40115 4.37318
183 4AXD ANP 0.001066 0.4167 4.5
184 4GYW UDP 0.0008335 0.41507 4.5
185 1FIQ SAL 0.002276 0.40078 4.5
186 1Q11 TYE 0.001106 0.44859 4.56989
187 1EP2 FMN 0.00002028 0.46978 4.5977
188 1EP2 ORO 0.00002941 0.43208 4.5977
189 2P8B NSK 0.001887 0.44977 4.60705
190 1NN5 ANP 0.0009357 0.4106 4.65116
191 1NN5 2DT 0.0009357 0.4106 4.65116
192 3E8N ATP 0.002316 0.41188 4.69208
193 3E8N VRA 0.002316 0.41188 4.69208
194 1BDB NAD 0.008267 0.41109 4.69314
195 4QVH COA 0.0008233 0.40858 4.75
196 3WBF NAP 0.0007446 0.41232 4.91803
197 3DGB MUC 0.005593 0.40467 4.97382
198 4N02 FNR 0.000009425 0.51351 5.04202
199 1TU3 GNP 0.0006366 0.40965 5.06329
200 2Q2V NAD 0.0006763 0.41941 5.09804
201 3PVT 3HC 0.0008188 0.42174 5.14469
202 3BW2 FMN 0.00003368 0.45169 5.14905
203 3P3N AKG 0.02046 0.40425 5.15759
204 2WA4 069 0.007168 0.4005 5.15759
205 1FL2 FAD 0.0001366 0.45162 5.16129
206 2GJN FMN 0.00006965 0.46268 5.18293
207 2GJN NIS 0.0000866 0.44754 5.18293
208 1I2L DCS 0.002006 0.40096 5.20446
209 1VF1 GSH 0.0007194 0.4201 5.24017
210 2YP9 SIA CMO 0.0008444 0.42426 5.25
211 4Q0A 4OA 0.0007276 0.41993 5.25
212 3QV9 QV7 0.007708 0.41801 5.25
213 1DLJ UGA 0.003758 0.41095 5.25
214 1DLJ NAI 0.006102 0.40354 5.25
215 1OX5 1PR 0.001222 0.40319 5.25
216 2V68 CAP 0.007261 0.40317 5.25
217 2XK9 XK9 0.001262 0.41178 5.2795
218 1RZM PEP 0.002629 0.43266 5.32544
219 1RZM E4P 0.02111 0.40775 5.32544
220 4PLG OXM 0.002692 0.40439 5.38922
221 4PLG NAI 0.002692 0.40439 5.38922
222 1JA9 NDP 0.01149 0.40463 5.47445
223 3UEC ALA ARG TPO LYS 0.03009 0.40164 5.47945
224 2WUF KEM 0.0008934 0.40152 5.49828
225 3I0O SMI 0.001613 0.44781 5.60472
226 3I0O ADP 0.004014 0.4148 5.60472
227 1Y9Q MED 0.0009027 0.46588 5.72917
228 3IAE D7K 0.0008032 0.41419 5.75
229 4PVV HO4 0.0006041 0.42737 5.8642
230 4KS1 2H8 0.004328 0.40351 5.89744
231 2BH9 NAP 0.00342 0.4044 5.93047
232 1UF5 CDT 0.002103 0.42598 5.94059
233 2IXB A2G 0.001902 0.41058 6
234 4CMF PXG 0.006992 0.40146 6
235 1I0Z OXM 0.03352 0.41091 6.00601
236 1I0Z NAI 0.0001175 0.40326 6.00601
237 1RYI GOA 0.0002024 0.44927 6.02094
238 1RYI FAD 0.001694 0.41551 6.02094
239 4TMK T5A 0.001411 0.40758 6.10329
240 1F1V DHY 0.004498 0.41764 6.19195
241 4F8L GAL 0.02059 0.43729 6.2069
242 3FC4 EDO 0.001534 0.42719 6.25
243 1B8U OAA 0.0004865 0.42272 6.25
244 1B8U NAD 0.0001101 0.42272 6.25
245 2C7G FAD 0.005677 0.40852 6.25
246 2C7G ODP 0.005778 0.4075 6.25
247 1N9L FMN 0.0003698 0.43007 6.42202
248 2QLX RM4 0.02202 0.4081 6.48148
249 3F81 STT 0.006678 0.44687 6.55738
250 2Q37 3AL 0.002997 0.43601 6.62983
251 2Z9V PXM 0.00209 0.43688 6.63265
252 2V7T SAH 0.02061 0.40335 6.68896
253 4G87 UD1 0.001276 0.42422 6.75
254 4C12 ADP 0.005397 0.40702 6.75
255 1TDF NAP 0.005877 0.41658 6.96203
256 3QDT A2G GAL 0.002147 0.46351 6.99301
257 3OIX FMN 0.0003649 0.4469 7
258 3I28 34N 0.003483 0.40952 7
259 2F01 BTN 0.003015 0.42407 7.08661
260 2F01 BTQ 0.003015 0.42407 7.08661
261 1TB3 FMN 0.000001578 0.5559 7.10227
262 1P4C FMN 0.0000332 0.50232 7.10526
263 1Y42 TYR 0.004809 0.42153 7.14286
264 1EYE PMM 0.003556 0.41227 7.14286
265 1VDC FAD 0.001978 0.41898 7.20721
266 1AL8 FMN 0.000009732 0.51072 7.24234
267 1AL8 DHP 0.00002659 0.45293 7.24234
268 4DQ2 BTX 0.0004984 0.41793 7.31707
269 1KDK DHT 0.0004847 0.40681 7.34463
270 1XK5 TPG 0.02799 0.40943 7.35294
271 2RHW C0E 0.00244 0.42534 7.42049
272 1GTE FMN 0.00007573 0.42 7.5
273 4Q3R XA2 0.001117 0.40193 7.79221
274 1G8S MET 0.0008345 0.46743 7.82609
275 4O1M NAD 0.0004108 0.42218 7.93651
276 4COQ SAN 0.01434 0.41132 8.09717
277 2F6U CIT 0.004988 0.44343 8.11966
278 4OB6 S2T 0.000166 0.4015 8.21114
279 2BTO GTP 0.003647 0.40104 8.33333
280 2JGS BTN 0.00603 0.41998 8.46154
281 2V5E SCR 0.01574 0.43533 8.5
282 3RF4 FUN 0.004343 0.42341 8.62069
283 3ZV6 NAD 0.003028 0.4069 8.75
284 3ZV6 4HB 0.003236 0.4069 8.75
285 4NAT ADP 0.01868 0.40213 8.75
286 2IYG FMN 0.002743 0.41663 8.87097
287 2B4Q NAP 0.0018 0.4014 9.05797
288 1YRX FMN 0.004553 0.40388 9.09091
289 3NCQ ATP 0.0005423 0.40193 9.2437
290 1T0S BML 0.01103 0.42869 9.30233
291 1SB8 NAD 0.001379 0.42446 9.375
292 1SB8 UD2 0.002085 0.42164 9.375
293 4IVG ANP 0.0004934 0.40955 9.5
294 2QCX PF1 0.005331 0.42504 9.5057
295 2AEB ABH 0.002236 0.40294 9.62733
296 3BY8 MLT 0.0001056 0.51734 9.85915
297 4DEM YS4 0.002042 0.43835 10.1333
298 1CSI CMX 0.003057 0.40469 10.25
299 1CSI OAA 0.003057 0.40469 10.25
300 4L6C 0BT 0.0005602 0.40493 10.396
301 1XOC VAL ASP SER LYS ASN THR SER SER TRP 0.0004759 0.4332 10.5
302 1D3V ABH 0.0006915 0.40852 10.5263
303 3FSY SCA 0.00096 0.41882 10.8434
304 1EJE FMN 0.002126 0.40386 10.9375
305 1W7J ADP BEF 0.001496 0.41321 11.2583
306 2PR5 FMN 0.001181 0.41267 11.3636
307 1KBI FMN 0.0000000008061 0.59876 11.5
308 1KBJ FMN 0.000001036 0.55494 11.5
309 1KBI PYR 0.000001462 0.55105 11.5
310 2Y7P SAL 0.001368 0.44468 11.9266
311 1SG4 CO8 0.000304 0.42153 12.3077
312 1K27 MTM 0.002106 0.40188 13.0742
313 1ULE GLA GAL NAG 0.01356 0.42428 13.3333
314 1NNU TCT 0.02087 0.40031 13.3333
315 1SS4 GSH 0.001657 0.49694 13.7255
316 1SS4 CIT 0.001716 0.46666 13.7255
317 2EWM NAD 0.0005581 0.41934 14.0562
318 2X1L MET 0.03343 0.40063 14.75
319 4CCO OGA 0.004975 0.42091 15
320 1YOA FMN 0.003852 0.47808 15.0943
321 3TA2 AKG 0.001051 0.4075 15.2542
322 1MXI SAH 0.0001514 0.44346 15.625
323 4Q4K FMN 0.00004051 0.48968 15.75
324 4F4S EFO 0.004736 0.42182 17.1053
325 2VAR ANP 0.0004547 0.40394 17.5719
326 2XD9 XD9 0.03504 0.4076 19.1617
327 2E2R 2OH 0.0005032 0.42499 22.1311
328 2FYU FDN 0.001394 0.41019 23.0769
329 2A2X NA9 0.001376 0.41038 23.5294
330 1O9U ADZ 0.003673 0.46012 27.7778
331 1PS9 FMN 0.0000009172 0.54543 30.75
332 1Z42 FMN 0.000000009904 0.70294 32.8402
333 1Z44 FMN 0.00000000646 0.70114 32.8402
334 1Z41 FMN 0.000000005707 0.58169 32.8402
335 1Z48 FMN 0.000000005578 0.58158 32.8402
336 1Z44 NPO 0.0009783 0.5113 32.8402
337 2HV8 GTP 0.001061 0.40095 37.5
338 1DJN FMN 0.0000004396 0.56526 40
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