Receptor
PDB id Resolution Class Description Source Keywords
1P84 2.5 Å EC: 1.10.2.2 HDBT INHIBITED YEAST CYTOCHROME BC1 COMPLEX SACCHAROMYCES CEREVISIAE CYTOCHROME BC1 COMPLEX COMPLEX III UBIQUINOL CYTOCHROME COXIDOREDUCTASE HYDROXYQUINONE HHDBT QO SITE PHOSPHOLIPIMEMBRANE PROTEIN OXIDOREDUCTASE
Ref.: STRUCTURE OF THE YEAST CYTOCHROME BC1 COMPLEX WITH HYDROXYQUINONE ANION QO SITE INHIBITOR BOUND J.BIOL.CHEM. V. 278 31303 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
3PE C:710;
C:711;
Invalid;
Invalid;
none;
none;
submit data
748.065 C41 H82 N O8 P CCCCC...
3PH A:713;
D:714;
Invalid;
Invalid;
none;
none;
submit data
704.998 C39 H77 O8 P CCCCC...
CDL D:731;
Invalid;
none;
submit data
1464.04 C81 H156 O17 P2 CCCCC...
DBT C:705;
Valid;
none;
submit data
279.355 C14 H17 N O3 S CCCCC...
FES E:704;
Part of Protein;
none;
submit data
175.82 Fe2 S2 S1[Fe...
HEM C:701;
C:702;
D:703;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
submit data
616.487 C34 H32 Fe N4 O4 Cc1c2...
PC1 D:715;
Invalid;
none;
submit data
790.145 C44 H88 N O8 P CCCCC...
UMQ A:721;
Invalid;
none;
submit data
496.589 C23 H44 O11 CCCCC...
UQ6 C:706;
Invalid;
none;
submit data
592.891 C39 H60 O4 Cc1c(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1EZV 2.3 Å EC: 1.10.2.2 STRUCTURE OF THE YEAST CYTOCHROME BC1 COMPLEX CO- CRYSTALLIZED WITH AN ANTIBODY FV-FRAGMENT SACCHAROMYCES CEREVISIAE CYTOCHROME BC1 COMPLEX COMPLEX III QCR MITOCHONDRIA YEAST ANTIBODY FV-FRAGMENT STIGMATELLIN COENZYME Q6 MATRIX PROCESSING PEPTIDASES UBIQUINONE ELECTRON TRANSFERPROTON TRANSFER Q-CYCLE OXIDOREDUCTASE/ELECTRON TRANSPORTCOMPLEX
Ref.: STRUCTURE AT 2.3 A RESOLUTION OF THE CYTOCHROME BC(1) COMPLEX FROM THE YEAST SACCHAROMYCES CEREVISIAE CO-CRYSTALLIZED WITH AN ANTIBODY FV FRAGMENT. STRUCTURE FOLD.DES. V. 8 669 2000
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 1EZV - SMA C30 H42 O7 C/C=C(C)/C....
2 1P84 - DBT C14 H17 N O3 S CCCCCCCC1=....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 2IBZ - SMA C30 H42 O7 C/C=C(C)/C....
2 1EZV - SMA C30 H42 O7 C/C=C(C)/C....
3 1P84 - DBT C14 H17 N O3 S CCCCCCCC1=....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 2IBZ - SMA C30 H42 O7 C/C=C(C)/C....
2 1EZV - SMA C30 H42 O7 C/C=C(C)/C....
3 1P84 - DBT C14 H17 N O3 S CCCCCCCC1=....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: DBT; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 DBT 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1EZV; Ligand: SMA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1ezv.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1EZV; Ligand: SMA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1ezv.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1EZV; Ligand: UQ6; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1ezv.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1EZV; Ligand: UQ6; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1ezv.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
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