Receptor
PDB id Resolution Class Description Source Keywords
1P9P 2.5 Å EC: 2.1.1.31 THE CRYSTAL STRUCTURE OF A M1G37 TRNA METHYLTRANSFERASE, TRM ESCHERICHIA COLI KNOT METHYLTRANSFERASE ADOMET S-ADENOSYLMETHIONINE SPOUTRANSFERASE
Ref.: INSIGHTS INTO CATALYSIS BY A KNOTTED TRMD TRNA METHYLTRANSFERASE. J.MOL.BIOL. V. 333 931 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SAH A:300;
Valid;
none;
Kd = 68 nM
384.411 C14 H20 N6 O5 S c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1P9P 2.5 Å EC: 2.1.1.31 THE CRYSTAL STRUCTURE OF A M1G37 TRNA METHYLTRANSFERASE, TRM ESCHERICHIA COLI KNOT METHYLTRANSFERASE ADOMET S-ADENOSYLMETHIONINE SPOUTRANSFERASE
Ref.: INSIGHTS INTO CATALYSIS BY A KNOTTED TRMD TRNA METHYLTRANSFERASE. J.MOL.BIOL. V. 333 931 2003
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1P9P Kd = 68 nM SAH C14 H20 N6 O5 S c1nc(c2c(n....
70% Homology Family (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 4MCD ic50 = 4.7 uM 22L C12 H8 N2 O S c1ccc(cc1)....
2 3AXZ Kd = 372 uM ADN C10 H13 N5 O4 c1nc(c2c(n....
3 4MCC ic50 = 0.56 uM 21X C15 H14 N4 O2 S c1cc(ccc1C....
4 1UAK - SAM C15 H22 N6 O5 S C[S@@+](CC....
5 4YVH - SFG C15 H23 N7 O5 c1nc(c2c(n....
6 1UAL - SAH C14 H20 N6 O5 S c1nc(c2c(n....
7 1UAM - SAH C14 H20 N6 O5 S c1nc(c2c(n....
8 4YVG - SAM C15 H22 N6 O5 S C[S@@+](CC....
9 4MCB ic50 = 1.5 uM 21W C19 H18 N6 O2 S c1cc(ccc1C....
10 1P9P Kd = 68 nM SAH C14 H20 N6 O5 S c1nc(c2c(n....
50% Homology Family (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 4MCD ic50 = 4.7 uM 22L C12 H8 N2 O S c1ccc(cc1)....
2 3AXZ Kd = 372 uM ADN C10 H13 N5 O4 c1nc(c2c(n....
3 4MCC ic50 = 0.56 uM 21X C15 H14 N4 O2 S c1cc(ccc1C....
4 1UAK - SAM C15 H22 N6 O5 S C[S@@+](CC....
5 4YVH - SFG C15 H23 N7 O5 c1nc(c2c(n....
6 1UAL - SAH C14 H20 N6 O5 S c1nc(c2c(n....
7 1UAM - SAH C14 H20 N6 O5 S c1nc(c2c(n....
8 4YVG - SAM C15 H22 N6 O5 S C[S@@+](CC....
9 4MCB ic50 = 1.5 uM 21W C19 H18 N6 O2 S c1cc(ccc1C....
10 1P9P Kd = 68 nM SAH C14 H20 N6 O5 S c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: SAH; Similar ligands found: 197
No: Ligand ECFP6 Tc MDL keys Tc
1 SAH 1 1
2 5X8 0.759494 0.969697
3 A7D 0.734177 0.926471
4 TT8 0.709302 0.970588
5 SXZ 0.692308 0.916667
6 DSH 0.692308 0.914286
7 DTA 0.666667 0.857143
8 3DH 0.662338 0.869565
9 S8M 0.655556 0.901408
10 SFG 0.635294 0.954545
11 SA8 0.62069 0.915493
12 EEM 0.617977 0.890411
13 MTA 0.615385 0.869565
14 SAI 0.613636 0.955882
15 S7M 0.586957 0.916667
16 36A 0.586538 0.90411
17 K15 0.583333 0.878378
18 RAB 0.573333 0.84058
19 ADN 0.573333 0.84058
20 XYA 0.573333 0.84058
21 62X 0.572917 0.855263
22 5CD 0.571429 0.852941
23 0UM 0.5625 0.876712
24 5N5 0.558442 0.84058
25 A4D 0.551282 0.867647
26 SAM 0.537634 0.916667
27 SSA 0.536842 0.712644
28 SMM 0.536842 0.88
29 KB1 0.534653 0.902778
30 A5D 0.532609 0.857143
31 SIB 0.53125 0.928571
32 EP4 0.530864 0.819444
33 DSZ 0.530612 0.732558
34 GSU 0.53 0.752941
35 AMP 0.529412 0.763158
36 A 0.529412 0.763158
37 5CA 0.525773 0.712644
38 ME8 0.524752 0.8125
39 M2T 0.52439 0.821918
40 6RE 0.523256 0.824324
41 GJV 0.522727 0.813333
42 AAT 0.515789 0.863014
43 LSS 0.515152 0.696629
44 KAA 0.514852 0.727273
45 J7C 0.511364 0.835616
46 A5A 0.510417 0.697674
47 SON 0.505495 0.805195
48 SRP 0.505155 0.805195
49 5AL 0.5 0.779221
50 VMS 0.5 0.681818
51 KH3 0.5 0.866667
52 ADX 0.5 0.694118
53 CA0 0.5 0.769231
54 AMP MG 0.5 0.74359
55 AMO 0.5 0.805195
56 54H 0.5 0.681818
57 AHX 0.49505 0.753086
58 TSB 0.494949 0.689655
59 53H 0.494949 0.674157
60 G5A 0.494737 0.712644
61 A2D 0.494382 0.74359
62 ABM 0.494382 0.74359
63 ZAS 0.494253 0.808219
64 A6D 0.490196 0.759494
65 8QN 0.49 0.779221
66 GEK 0.49 0.956522
67 GAP 0.489583 0.769231
68 A3S 0.48913 0.884058
69 AN2 0.48913 0.734177
70 S4M 0.488889 0.831169
71 SRA 0.488636 0.746835
72 LAD 0.485437 0.810127
73 52H 0.484848 0.674157
74 A12 0.483516 0.759494
75 BA3 0.483516 0.74359
76 AP2 0.483516 0.759494
77 AOC 0.483146 0.842857
78 NEC 0.483146 0.788732
79 Y3J 0.481481 0.768116
80 NVA LMS 0.480392 0.696629
81 VRT 0.479167 0.861111
82 50T 0.478723 0.734177
83 5AS 0.478261 0.655556
84 B4P 0.478261 0.74359
85 ADP 0.478261 0.74359
86 AP5 0.478261 0.74359
87 A3N 0.477778 0.830986
88 YSA 0.476636 0.712644
89 XAH 0.476636 0.768293
90 0XU 0.473684 0.897059
91 WAQ 0.471154 0.807692
92 NSS 0.470588 0.712644
93 5AD 0.468354 0.791045
94 ADP MG 0.468085 0.734177
95 AU1 0.468085 0.725
96 M33 0.468085 0.734177
97 MAO 0.467391 0.797468
98 TXA 0.466667 0.759494
99 A3G 0.466667 0.871429
100 NB8 0.466667 0.775
101 3AM 0.465909 0.727273
102 DAL AMP 0.465347 0.779221
103 ATP 0.463158 0.74359
104 ADP BEF 0.463158 0.716049
105 A3T 0.463158 0.842857
106 BEF ADP 0.463158 0.716049
107 ACP 0.463158 0.746835
108 7D7 0.4625 0.785714
109 LEU LMS 0.461538 0.677778
110 APC 0.458333 0.759494
111 AQP 0.458333 0.74359
112 APR 0.458333 0.766234
113 PRX 0.458333 0.746835
114 AR6 0.458333 0.766234
115 5FA 0.458333 0.74359
116 IOT 0.456897 0.761905
117 4AD 0.456311 0.794872
118 PAJ 0.456311 0.722892
119 WSA 0.45614 0.72093
120 FA5 0.453704 0.805195
121 YAP 0.453704 0.794872
122 RBY 0.453608 0.782051
123 ADV 0.453608 0.782051
124 ADP PO3 0.453608 0.763158
125 AD9 0.453608 0.725
126 SAP 0.453608 0.728395
127 AGS 0.453608 0.728395
128 PTJ 0.45283 0.731707
129 MHZ 0.452632 0.797468
130 00A 0.451923 0.740741
131 A3P 0.451613 0.74026
132 YLP 0.451327 0.771084
133 7MD 0.45045 0.768293
134 ALF ADP 0.45 0.707317
135 ADP ALF 0.45 0.707317
136 ATP MG 0.44898 0.734177
137 2VA 0.447917 0.819444
138 OOB 0.446602 0.779221
139 ANP 0.444444 0.725
140 ACQ 0.444444 0.746835
141 TAT 0.444444 0.7375
142 P5A 0.443396 0.719101
143 7D5 0.443182 0.708861
144 ARG AMP 0.442478 0.759036
145 A1R 0.442308 0.7625
146 YLC 0.439655 0.790123
147 2AM 0.438202 0.717949
148 DLL 0.438095 0.779221
149 A22 0.436893 0.734177
150 D3Y 0.436893 0.859155
151 TYR AMP 0.436364 0.782051
152 ATF 0.435644 0.716049
153 MYR AMP 0.435185 0.746988
154 SO8 0.434343 0.808219
155 3UK 0.433962 0.769231
156 OAD 0.433962 0.769231
157 TAD 0.433628 0.765432
158 25A 0.432692 0.74359
159 ANP MG 0.431373 0.707317
160 VO4 ADP 0.431373 0.734177
161 ADP VO4 0.431373 0.734177
162 9SN 0.431193 0.731707
163 TYM 0.431034 0.805195
164 PR8 0.429907 0.8
165 ADQ 0.428571 0.746835
166 YLB 0.42735 0.771084
167 3OD 0.425926 0.769231
168 FYA 0.425926 0.779221
169 1ZZ 0.425926 0.746988
170 PPS 0.425743 0.674419
171 NVA 2AD 0.424242 0.808219
172 MAP 0.423077 0.707317
173 A2P 0.421053 0.727273
174 4YB 0.421053 0.735632
175 ADP BMA 0.420561 0.746835
176 5SV 0.419048 0.731707
177 3NZ 0.416667 0.824324
178 YLA 0.416667 0.771084
179 48N 0.413793 0.753086
180 LPA AMP 0.413793 0.768293
181 AYB 0.413223 0.761905
182 QQY 0.413043 0.696203
183 ACK 0.413043 0.710526
184 JB6 0.412844 0.7625
185 BIS 0.412844 0.719512
186 PAP 0.41 0.730769
187 OVE 0.408602 0.7125
188 4UV 0.40708 0.75
189 AMP DBH 0.40708 0.746835
190 3AD 0.406977 0.852941
191 AF3 ADP 3PG 0.40678 0.743902
192 OMR 0.40678 0.738095
193 LAQ 0.405172 0.768293
194 A A 0.40367 0.74359
195 7C5 0.403509 0.789474
196 7MC 0.403361 0.75
197 4UU 0.4 0.75
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1P9P; Ligand: SAH; Similar sites found: 551
This union binding pocket(no: 1) in the query (biounit: 1p9p.bio2) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3DCM SAM 0.00002501 0.50697 None
2 1NU4 MLA 0.002304 0.48879 None
3 3SJ0 DXC 0.002007 0.45544 None
4 2IYG FMN 0.0009739 0.43216 None
5 2QLX RM4 0.006713 0.43087 None
6 1POC GEL 0.0007689 0.4216 None
7 1ECM TSA 0.004774 0.4149 None
8 3CR4 PNT 0.004332 0.4118 None
9 1I0Z OXM 0.001758 0.47464 0.766284
10 2VAR AMP 0.0003369 0.45568 0.766284
11 1V6A TRE 0.00104 0.45432 0.766284
12 2VAR KDF 0.001273 0.4277 0.766284
13 2VAR ANP 0.001052 0.40469 0.766284
14 2VAR KDG 0.005661 0.4028 0.766284
15 1EYQ NAR 0.002392 0.42715 0.900901
16 1VQ2 DDN 0.001147 0.41548 1.03627
17 4K7O EKZ 0.006564 0.43132 1.19048
18 3N5O GSH 0.001819 0.40443 1.2766
19 1F5F DHT 0.002048 0.40661 1.46341
20 3BP1 GUN 0.01381 0.4195 1.53257
21 3I0O ADP 0.003224 0.41688 1.53257
22 1XHL NDP 0.0009783 0.41635 1.53257
23 3H22 B53 0.006926 0.40372 1.53257
24 4BT5 23B 0.002687 0.42509 1.55642
25 1TRD PGH 0.001163 0.4292 1.6
26 3NCQ ATP 0.0003605 0.41982 1.68067
27 1KDK DHT 0.0009815 0.40197 1.69492
28 1QH9 LAC 0.0001185 0.5038 1.72414
29 1Q6O LG6 0.001646 0.4142 1.85185
30 1X8X TYR 0.000234 0.46193 1.91571
31 4USS GSH 0.001515 0.44101 1.91571
32 3A1I UNU 0.001368 0.43161 1.91571
33 4M2K PLP 0.002117 0.42932 1.91571
34 2OI2 DP6 0.001318 0.42712 1.91571
35 3O03 GCO 0.01785 0.42348 1.91571
36 3UBW 6SP 0.02831 0.41819 1.91571
37 1R37 ETX 0.01163 0.41388 1.91571
38 3NNF AKG 0.01391 0.41035 1.91571
39 1C7R PA5 0.004725 0.41031 1.91571
40 5FIT AP2 0.005836 0.4023 1.91571
41 2RCA GLY 0.03219 0.40139 1.91571
42 4GO7 THR 0.002315 0.42257 2
43 2QGI UDP 0.0131 0.4063 2.01613
44 4COQ SAN 0.002271 0.44595 2.02429
45 4EXO PYR 0.004637 0.44547 2.05479
46 2PYU IMP 0.01305 0.40638 2.28311
47 1OGD RIP 0.0009543 0.44947 2.29008
48 4JWH SAH 0.000002161 0.52162 2.29885
49 2ZWS PLM 0.001124 0.50612 2.29885
50 3SHR CMP 0.00007369 0.48177 2.29885
51 3TKA CTN 0.003899 0.46234 2.29885
52 3CQ5 PMP 0.000385 0.45952 2.29885
53 1UOU CMU 0.0002265 0.45077 2.29885
54 2NCD ADP 0.001456 0.44795 2.29885
55 2BO4 FLC 0.002919 0.44782 2.29885
56 1NX4 AKG 0.001683 0.44521 2.29885
57 1ZUW DGL 0.001108 0.44079 2.29885
58 3P7I P7I 0.002661 0.4307 2.29885
59 4N02 FNR 0.001587 0.42923 2.29885
60 1PFK FBP 0.001947 0.42555 2.29885
61 4B9E FAH 0.01463 0.42153 2.29885
62 2P41 G1G 0.005007 0.41405 2.29885
63 1B63 ANP 0.0006979 0.40666 2.29885
64 1YID ATP 0.01388 0.40616 2.29885
65 3TKA SAM 0.001051 0.40471 2.29885
66 1QRD DQN 0.03677 0.4014 2.29885
67 2P41 SAH 0.002277 0.40108 2.29885
68 2JGS BTN 0.01191 0.40561 2.30769
69 4F2Q QUS 0.002763 0.41029 2.32558
70 4EBZ NAG NAG NAG NAG 0.01783 0.40878 2.35849
71 4NES UDP 0.0003747 0.43259 2.40642
72 1VR0 3SL 0.000019 0.5128 2.42915
73 2V5E SCR 0.001334 0.49068 2.5
74 3PMD 11A 0.006255 0.40548 2.61438
75 4FK7 P34 0.00501 0.44513 2.62009
76 1V2G OCA 0.0002639 0.45392 2.63158
77 4E28 9MZ 0.001098 0.4602 2.68199
78 3MAG 3MA 0.006915 0.45279 2.68199
79 3UDG TMP 0.004763 0.45268 2.68199
80 3MCT 3MC 0.001388 0.44262 2.68199
81 4E28 0MZ 0.001935 0.44258 2.68199
82 1NML CIT 0.001578 0.44027 2.68199
83 4RPM HXC 0.018 0.43904 2.68199
84 1A59 CIT 0.005557 0.43472 2.68199
85 2Y0I AKG 0.003576 0.43094 2.68199
86 5D63 FUC GAL GLA 0.001947 0.4308 2.68199
87 3P3N AKG 0.004969 0.4306 2.68199
88 4JWX 1N4 0.002793 0.42982 2.68199
89 3MAG SAH 0.000291 0.42718 2.68199
90 3MCT SAH 0.0002367 0.42576 2.68199
91 1ZED PNP 0.008733 0.4255 2.68199
92 4B7E OGA 0.005874 0.42154 2.68199
93 1KYQ NAD 0.0006531 0.41967 2.68199
94 5D63 FUC GLA GLA 0.008865 0.41922 2.68199
95 1R6W 164 0.001234 0.41873 2.68199
96 4M37 SAH 0.0006515 0.41549 2.68199
97 2OZE AGS 0.0008661 0.41547 2.68199
98 1J78 OLA 0.02353 0.41187 2.68199
99 1TL2 NDG 0.01977 0.41077 2.68199
100 2CW6 3HG 0.03296 0.40982 2.68199
101 4FXQ G9L 0.02322 0.40927 2.68199
102 2UYQ SAM 0.02218 0.40534 2.68199
103 3JQ3 ADP 0.006655 0.40441 2.68199
104 1A59 COA 0.001994 0.40306 2.68199
105 1H2M OGA 0.02165 0.40161 2.68199
106 3MBI HSX 0.02656 0.4 2.68199
107 2XI7 XI7 0.001323 0.50218 2.71739
108 1Y1A GSH 0.003419 0.47948 2.73224
109 2F2U M77 0.001824 0.42667 2.73632
110 4INB 1F6 0.0007223 0.414 2.73973
111 4JWF SAH 0.000002783 0.52617 2.76498
112 1QDS PGA 0.001442 0.43071 2.78884
113 3FED BIX 0.002801 0.40181 2.82885
114 1B5E DCM 0.00905 0.40353 2.84553
115 1DCP HBI 0.00512 0.41424 2.88462
116 1FMB HYB 0.005254 0.40405 2.88462
117 3WUD GLC GAL 0.002773 0.45634 2.94118
118 1ZS6 ADP 0.005286 0.41309 2.95858
119 2VWT PYR 0.01446 0.4152 2.99625
120 2WOR 2AN 0.006192 0.42627 3
121 3UIE ANP 0.003364 0.41615 3
122 3CBG 4FE 0.003013 0.47194 3.01724
123 3CBG FER 0.007251 0.44341 3.01724
124 3CBG SAH 0.002658 0.40262 3.01724
125 4C1K PEP 0.009594 0.40719 3.05344
126 3GYQ SAM 0.00004449 0.50154 3.06513
127 3LTW HLZ 0.0002801 0.48696 3.06513
128 1RYD GLC 0.0004732 0.47668 3.06513
129 1E5F PLP 0.0001375 0.45324 3.06513
130 1Z42 HBA 0.01222 0.45051 3.06513
131 3K3G MMU 0.001672 0.44222 3.06513
132 2C5S AMP 0.004247 0.4402 3.06513
133 2QCX PF1 0.002915 0.43482 3.06513
134 1YOE RIB 0.001568 0.43464 3.06513
135 2DWU DGL 0.001655 0.43369 3.06513
136 5T0A A3P 0.001077 0.43306 3.06513
137 4OB6 S2T 0.0005467 0.43154 3.06513
138 1T10 F6P 0.004337 0.42729 3.06513
139 1ZGA SAH 0.0009806 0.42706 3.06513
140 3PTG 932 0.01465 0.41309 3.06513
141 3VCA PRO 0.00919 0.41046 3.06513
142 3K56 IS3 0.002882 0.40961 3.06513
143 2OQ5 BEN 0.02192 0.40894 3.06513
144 1O0S NAI 0.0007612 0.40016 3.06513
145 3UCJ AZM 0.002916 0.42364 3.0837
146 1VE3 SAM 0.002185 0.40169 3.0837
147 3JQM GTP 0.00519 0.41341 3.18471
148 2Y7P SAL 0.00328 0.42687 3.21101
149 1L1Q 9DA 0.001836 0.40047 3.22581
150 1W3R PYR 0.006801 0.43736 3.24074
151 2ALG DAO 0.000636 0.46363 3.26087
152 4KGM ATP 0.0005828 0.44072 3.26531
153 1SS4 GSH 0.001513 0.50455 3.26797
154 1SS4 CIT 0.004612 0.44388 3.26797
155 1GU3 BGC BGC BGC BGC BGC 0.01392 0.40033 3.3557
156 3RK0 AMP 0.0012 0.42868 3.37553
157 3RK1 ATP 0.003849 0.42855 3.37553
158 3S9K CIT 0.0009774 0.50227 3.38983
159 1QB7 ADE 0.006524 0.40475 3.38983
160 3WH2 FLC 0.02642 0.40182 3.40136
161 1PEA ACM 0.00005316 0.53986 3.44828
162 4F8L GAL 0.00593 0.46596 3.44828
163 2P69 PLP 0.001466 0.44782 3.44828
164 3WKX FUB 0.002274 0.44593 3.44828
165 1GJW MAL 0.0007212 0.44261 3.44828
166 1YBH P22 0.0008534 0.43972 3.44828
167 1P72 THM 0.002132 0.43476 3.44828
168 2I4O ATP 0.001241 0.43329 3.44828
169 1E4E PHY 0.0004895 0.43328 3.44828
170 1M1B SPV 0.004317 0.42737 3.44828
171 2Z9I GLY ALA THR VAL 0.008177 0.4271 3.44828
172 2YIV YIV 0.01116 0.42685 3.44828
173 4ARF IP8 GLY PRO ALA 0.0009099 0.42352 3.44828
174 4UAL 3FV 0.0006941 0.42316 3.44828
175 2YIV NBN 0.0104 0.42193 3.44828
176 3W2W ATP 0.001828 0.42167 3.44828
177 1GJW GLC 0.01059 0.42157 3.44828
178 1EYE PMM 0.001954 0.42055 3.44828
179 1DXY COI 0.02161 0.41923 3.44828
180 1NNS ASP 0.003008 0.41807 3.44828
181 3TY3 GGG 0.01631 0.41788 3.44828
182 2GJP MAL 0.02466 0.40436 3.44828
183 2FGQ MLT 0.02322 0.40022 3.44828
184 1E2S CSN 0.005179 0.40011 3.44828
185 3KYF 5GP 5GP 0.003042 0.41788 3.4632
186 3QDV A2G 0.0007825 0.49246 3.4965
187 3QDW A2G 0.000808 0.49175 3.4965
188 3QDT A2G GAL 0.001539 0.46879 3.4965
189 3QDY A2G GAL 0.001789 0.46561 3.4965
190 3QDY CBS 0.003275 0.44548 3.4965
191 3QDW NDG 0.003414 0.44463 3.4965
192 3QDV NDG 0.004524 0.43891 3.4965
193 2WGC SIA GAL BGC 0.006064 0.46542 3.50877
194 3BY8 MLT 0.0007504 0.47544 3.52113
195 1ZZ7 S0H 0.0007822 0.45311 3.53535
196 3SCH TB6 0.01303 0.41164 3.53535
197 1UUY PPI 0.03259 0.41007 3.59281
198 3LM9 ADP 0.001735 0.42254 3.64238
199 1JH7 UVC 0.01742 0.40087 3.7037
200 1UW1 ADP 0.001586 0.44634 3.75
201 4JP3 CIT 0.002931 0.41379 3.76569
202 2HNK SAH 0.001896 0.4 3.76569
203 3RGG AIR 0.001241 0.43329 3.77358
204 1G0V NAG 0.003379 0.48829 3.83142
205 3IHB TRS 0.003074 0.4738 3.83142
206 4M5P MLA 0.005887 0.4565 3.83142
207 4B16 NAG 0.006044 0.4559 3.83142
208 2HW1 FRU 0.002007 0.44188 3.83142
209 1GVF PGH 0.002113 0.43492 3.83142
210 4M5P 23W 0.008243 0.43328 3.83142
211 3IHB GLU 0.007309 0.42913 3.83142
212 2CE7 ADP 0.001123 0.42486 3.83142
213 1CKN GTP 0.003119 0.42245 3.83142
214 3TXO 07U 0.001419 0.42108 3.83142
215 1UBY DMA 0.000835 0.42034 3.83142
216 1CKM GTP 0.003816 0.41887 3.83142
217 4HA6 PXM 0.006849 0.41862 3.83142
218 2PHR MAN MAN BMA MAN 0.03713 0.41745 3.83142
219 1NW5 SAM 0.0008392 0.41182 3.83142
220 2H6T IVA VAL VAL STA ALA STA 0.001842 0.40823 3.83142
221 2HW1 ANP 0.0008464 0.40777 3.83142
222 4LXH C1E 0.002006 0.40692 3.83142
223 1JUV NDP 0.0001594 0.40683 3.83142
224 1MRH FMC 0.02563 0.4049 3.83142
225 3FXU TSU 0.000403 0.40415 3.83142
226 1O68 KIV 0.01132 0.40415 3.83142
227 3A2Y TS5 0.002579 0.40308 3.83142
228 1A27 EST 0.003554 0.40208 3.83142
229 2VPR TDC 0.001202 0.41915 3.86473
230 3BBH SFG 0.00000076 0.58593 3.90244
231 3BBD SAH 0.000009308 0.53738 3.90244
232 1XE7 GUN 0.007351 0.44311 3.94089
233 4JWJ SAH 0.000005383 0.51427 3.9604
234 1PTR PRB 0.002249 0.45313 4
235 2DQA NAG NAG NAG 0.005908 0.42834 4.03226
236 3L6R MLI 0.002286 0.4528 4.04624
237 1WGC SIA GAL BGC 0.01897 0.42945 4.09357
238 3RKR NAP 0.00005136 0.48797 4.19847
239 3NOJ PYR 0.01061 0.40778 4.20168
240 1YOA FMN 0.00195 0.49283 4.21456
241 1O9U ADZ 0.001074 0.4855 4.21456
242 3BLI PYR 0.0006707 0.47772 4.21456
243 2DVZ GLU 0.0001407 0.47067 4.21456
244 1KC7 PPR 0.001544 0.46078 4.21456
245 1Y42 TYR 0.001004 0.44854 4.21456
246 4RJK PYR 0.01368 0.42252 4.21456
247 1YHM AHD 0.006711 0.41901 4.21456
248 3IL6 B83 0.0007656 0.41315 4.21456
249 1NOW IFG 0.01038 0.41072 4.21456
250 3EYK EYK 0.01489 0.40901 4.21456
251 1F74 NAY 0.002649 0.40671 4.21456
252 1E7S NAP 0.002673 0.40171 4.21456
253 1MZV AMP 0.006376 0.40515 4.25532
254 5TWJ SAM 0.01048 0.41593 4.32099
255 1H8P PC 0.00179 0.47424 4.58716
256 1R5A GTS 0.002218 0.4285 4.58716
257 3ZF8 GDP 0.0001846 0.46601 4.59016
258 1RZM E4P 0.0008343 0.47328 4.5977
259 2JFV FLC 0.0008856 0.46441 4.5977
260 1GPJ CIT 0.0009366 0.46331 4.5977
261 3ZGE ASP 0.002753 0.45649 4.5977
262 9LDT OXM 0.006148 0.45551 4.5977
263 3BRE C2E 0.002426 0.44466 4.5977
264 4JEJ 1GP 0.0005318 0.44224 4.5977
265 2FKA BEF 0.007194 0.43864 4.5977
266 3FGZ BEF 0.01019 0.43549 4.5977
267 3LST SAH 0.001247 0.42317 4.5977
268 3DG6 MUC 0.001673 0.41841 4.5977
269 9LDB OXM 0.04352 0.41008 4.5977
270 1A8S PPI 0.004222 0.40994 4.5977
271 1Z45 GAL 0.01022 0.40603 4.5977
272 2V9M CIT 0.00687 0.40386 4.5977
273 1KHT AMP 0.00477 0.41491 4.6875
274 2YLD CMO 0.0144 0.40967 4.72441
275 3OII SAH 0.000002066 0.55331 4.74308
276 1RTF BEN 0.01559 0.41651 4.7619
277 1TE2 PGA 0.005079 0.44719 4.86726
278 4LFL TG6 0.003204 0.41699 4.93827
279 2VQ5 HBA 0.005038 0.43671 4.97512
280 2VQ5 LDP 0.04513 0.40276 4.97512
281 1HFA PIO 0.00044 0.54986 4.98084
282 2BZ1 TAU 0.0002472 0.54264 4.98084
283 1P9B HDA 0.0002181 0.48387 4.98084
284 1GPM AMP 0.001442 0.48172 4.98084
285 1WTC ACP 0.001071 0.4682 4.98084
286 1KTC NGA 0.0004569 0.46294 4.98084
287 1XX4 BAM 0.003971 0.45669 4.98084
288 4KCT FDP 0.0002728 0.45336 4.98084
289 1P9B GDP 0.0001645 0.44519 4.98084
290 4JLV ADP 0.01708 0.43597 4.98084
291 3BK2 U5P 0.001111 0.42996 4.98084
292 2BH9 NAP 0.000643 0.42899 4.98084
293 2Z9V PXM 0.003168 0.42751 4.98084
294 1AUA BOG 0.007588 0.41149 4.98084
295 4KCT PYR 0.00676 0.40872 4.98084
296 3O2K DST 0.008962 0.40844 4.98084
297 2C2A ADP 0.0019 0.40776 4.98084
298 4KOA NDP 0.001925 0.40755 4.98084
299 1LDM OXM 0.00567 0.40717 4.98084
300 3O2K QRP 0.00769 0.40192 4.98084
301 1MXI SAH 0.00001759 0.51914 5
302 3R51 MMA 0.006454 0.44598 5
303 1KQR MNA 0.0001794 0.51102 5.02793
304 1JN2 SFP 0.04336 0.40819 5.06329
305 2ZE3 AKG 0.001159 0.45228 5.09091
306 2OWZ CIT 0.0004918 0.47593 5.12048
307 2Q8M AMP 0.003921 0.40894 5.12048
308 2OWZ F6P 0.002261 0.40509 5.12048
309 1TH8 ADP 0.001715 0.42773 5.17241
310 4IO2 GLU 0.009644 0.40988 5.24194
311 4A3X LAT 0.006244 0.44671 5.28634
312 2PR5 FMN 0.002109 0.40222 5.30303
313 1DL7 NCH 0.009372 0.45488 5.35714
314 2X0K PPV 0.0002264 0.47941 5.36398
315 2G36 TRP 0.0007207 0.46126 5.36398
316 1Y7I SAL 0.0008935 0.45067 5.36398
317 1WRA PC 0.002675 0.4496 5.36398
318 3QO8 SSA 0.0001975 0.44755 5.36398
319 3NKS ACJ 0.0002135 0.44632 5.36398
320 2EJU SAH 0.0005702 0.42169 5.36398
321 1Y9Q MED 0.00854 0.41995 5.36398
322 1F1V DHY 0.004547 0.41576 5.36398
323 1WDA BAG 0.004722 0.41509 5.36398
324 3I51 45C 0.002967 0.41359 5.36398
325 2YVF NAD 0.007653 0.4102 5.36398
326 2YVF FAD 0.00734 0.4102 5.36398
327 2HFK E4H 0.008376 0.40968 5.36398
328 1YS4 NAP 0.0006652 0.40732 5.36398
329 2O66 FLC 0.02719 0.40535 5.36398
330 1UAY ADN 0.0002451 0.4495 5.3719
331 1OSS BEN 0.02093 0.40949 5.38117
332 1AX2 NDG GAL 0.0003027 0.47048 5.43933
333 1NXJ GLV 0.0009155 0.4892 5.46448
334 1NXJ TLA 0.001394 0.41463 5.46448
335 3UEC ALA ARG TPO LYS 0.002396 0.45184 5.47945
336 3ACC 5GP 0.002976 0.42328 5.52486
337 2Y6P CTP 0.0001798 0.46646 5.55556
338 1II5 GLU 0.00004872 0.51221 5.5794
339 2P3I MNA 0.0001067 0.51711 5.59006
340 1OGZ EQU 0.00285 0.41426 5.6
341 2VDJ HSE 0.01842 0.41619 5.64784
342 3AIA SAM 0.0000007631 0.59341 5.6872
343 1QD0 RR6 0.0001223 0.46673 5.74713
344 4ME6 ADP 0.000575 0.46553 5.74713
345 3E4O SIN 0.0006945 0.46196 5.74713
346 2XDQ MGX 0.003938 0.45688 5.74713
347 1H16 PYR 0.00298 0.45482 5.74713
348 2JBH 5GP 0.001046 0.44182 5.74713
349 4EPL JAI 0.002312 0.40885 5.74713
350 2BLE 5GP 0.007857 0.40842 5.74713
351 1H16 DTL 0.03859 0.40628 5.74713
352 3A2Q ACA ACA 0.002379 0.40431 5.74713
353 3CEV ARG 0.009635 0.40242 5.74713
354 3KMT SAH 0.00002642 0.48553 5.88235
355 2YY8 MTA 0.00000005826 0.66316 5.97015
356 2YY8 SAM 0.00000005865 0.61948 5.97015
357 3KU0 ADE 0.01868 0.4123 5.9761
358 4Q3F TLA 0.02337 0.40009 5.98291
359 1ULE GLA GAL NAG 0.0008327 0.48176 6
360 2Q37 3AL 0.03027 0.40156 6.07735
361 2EB5 OXL 0.0002179 0.49188 6.13027
362 3NK7 SAM 0.00008679 0.48386 6.13027
363 4JAL SAH 0.00006981 0.46194 6.13027
364 2Q3M MLA 0.003566 0.45907 6.13027
365 3GJB AKG 0.001356 0.43721 6.13027
366 3BHO B4P 0.01598 0.43344 6.13027
367 4W6Z ETF 0.01369 0.42936 6.13027
368 1PX8 XYP 0.005331 0.42338 6.13027
369 3QP6 HL6 0.001576 0.41938 6.13027
370 1OIK AKG 0.008842 0.41927 6.13027
371 2R5T ANP 0.001277 0.40196 6.13027
372 4IF4 BEF 0.02285 0.40324 6.25
373 4CNG SAH 0.0001672 0.47041 6.27451
374 1H8G CHT 0.04616 0.41599 6.31579
375 2OFD NGA 0.001893 0.44952 6.33803
376 2OFE NAG 0.002812 0.44176 6.33803
377 1N9L FMN 0.002003 0.40298 6.42202
378 2F7C CCU 0.001192 0.45174 6.43777
379 2YD6 FLC 0.0007533 0.54019 6.51341
380 3E81 SLB 0.0008712 0.45767 6.51341
381 3GTD MLI 0.001961 0.44232 6.51341
382 2Q1A 2KT 0.003065 0.44007 6.51341
383 2RCN GDP 0.0009654 0.4376 6.51341
384 1CBF SAH 0.0007807 0.42593 6.51341
385 2Q28 ADP 0.0007814 0.41286 6.51341
386 1Y8O ADP 0.008307 0.40059 6.51341
387 3WUC GLC GAL 0.01467 0.4093 6.56934
388 4F4S EFO 0.001061 0.44754 6.57895
389 1BTN I3P 0.004768 0.47554 6.60377
390 4CNE SAH 0.00004939 0.49955 6.74157
391 4CIB 7UZ 0.0002086 0.48471 6.89655
392 3CL5 SIO 0.004038 0.44122 6.89655
393 4C6F DOR 0.0009419 0.43802 6.89655
394 4C6F NCD 0.0009419 0.43802 6.89655
395 2IZ1 ATR 0.004459 0.43272 6.89655
396 2Q8H TF4 0.01589 0.42606 6.89655
397 2O2C G6Q 0.001199 0.41918 6.89655
398 3PXP MYR 0.001015 0.41735 6.89655
399 4LWM MHO 0.03822 0.40328 6.91244
400 3GM5 CIT 0.004254 0.43365 6.91824
401 1KYV RBF 0.001155 0.41537 6.91824
402 1C3V PDC 0.003588 0.43088 6.93878
403 2HVK TBA 0.01012 0.41661 7.07547
404 3F81 STT 0.001194 0.48315 7.10383
405 2WCV FUC 0.0008027 0.4465 7.14286
406 3UWB BB2 0.01895 0.40424 7.14286
407 1WHT BZS 0.002874 0.44134 7.18954
408 1T3D CYS 0.000861 0.47264 7.27969
409 3MD0 GDP 0.001317 0.43773 7.27969
410 4DYO SD4 0.002373 0.4273 7.27969
411 2J0W ASP 0.01785 0.41089 7.27969
412 3SBZ MLI 0.04683 0.40193 7.27969
413 3R4S SIA 0.03081 0.40166 7.27969
414 1Q3P GLU ALA GLN THR ARG LEU 0.004945 0.41427 7.33945
415 4IXW IXW 0.001484 0.43562 7.48031
416 1TU3 GNP 0.0001336 0.4133 7.59494
417 1NME 159 0.002776 0.46458 7.6087
418 3GD8 BOG 0.008241 0.43329 7.62332
419 3VPD CIT 0.0001669 0.53848 7.66284
420 3VPD BUA 0.001905 0.50307 7.66284
421 2HVW DDN 0.0001697 0.45544 7.66284
422 2ZJ5 ADP 0.00132 0.44981 7.66284
423 4LIT AKG 0.002521 0.43756 7.66284
424 2W8Q SIN 0.00569 0.43423 7.66284
425 1J1R ADE 0.008623 0.43152 7.66284
426 3TFC PEP 0.004759 0.42005 7.66284
427 1EB9 HBA 0.002275 0.41802 7.66284
428 1U5R ATP 0.001863 0.41225 7.66284
429 1LTH OXM 0.004445 0.41136 7.66284
430 3RF4 FUN 0.003465 0.42586 7.75862
431 3I6B KDO 0.00935 0.40766 7.77778
432 1YFZ IMP 0.01043 0.41064 7.80488
433 4LO6 SIA GAL 0.003133 0.44999 7.89474
434 1JGS SAL 0.0008403 0.51313 7.97101
435 2XRH NIO 0.0009598 0.47043 8
436 2E1A MSE 0.0002776 0.46531 8
437 3VPQ GSH 0.001675 0.4453 8.04598
438 3U1T MLI 0.006716 0.43086 8.04598
439 2B7N NTM 0.005761 0.4219 8.04598
440 5EQU AKG 0.02961 0.40605 8.04598
441 3SQG TP7 0.003214 0.40366 8.04598
442 4R3L COA 0.001252 0.41629 8.09249
443 1RYI GOA 0.002233 0.48535 8.42912
444 3L24 GOA 0.003341 0.4605 8.42912
445 4RNV FMN 0.006633 0.40447 8.42912
446 1Y2W NAG 0.003989 0.43491 8.4507
447 1Y75 NAG 0.0005723 0.4525 8.47458
448 2X2T GAL NGA 0.009895 0.43654 8.49673
449 1G8S MET 0.001846 0.45002 8.69565
450 4G28 0W8 0.00006658 0.4906 8.72483
451 3I7S PYR 0.0002153 0.51032 8.81226
452 4WBD ADP 0.0004581 0.48547 8.81226
453 1V2X SAM 0.0002698 0.46278 8.81226
454 4WVH ASP HIS ASP ALA HIS ALA 0.002059 0.42981 8.81226
455 1RQH PYR 0.009913 0.42291 8.81226
456 4WBD CIT 0.01496 0.42062 8.81226
457 3I8P 840 0.001594 0.41471 8.81226
458 2OKK ABU 0.02093 0.41347 8.81226
459 3DX5 DHB 0.007073 0.40336 8.81226
460 2FR6 URI 0.0003335 0.42968 8.90411
461 2FR6 CTN 0.000583 0.42136 8.90411
462 4JCA CIT 0.001917 0.48235 8.98204
463 2DTJ THR 0.001328 0.43213 8.98876
464 2AZ3 CDP 0.00155 0.44059 9.14634
465 1QO0 BMD 0.0005502 0.47373 9.1954
466 2GWD GLU 0.001303 0.43793 9.1954
467 4C2G ALA ALA ALA ALA 0.01475 0.41295 9.1954
468 2P8O BVA 0.0002075 0.44163 9.27835
469 1MQ0 BRD 0.00118 0.42407 9.28571
470 4AIG FLX 0.003615 0.41491 9.45274
471 2WMO GTP 0.002346 0.41294 9.47368
472 1SC3 MLI 0.0006619 0.48661 9.55056
473 2QV7 ADP 0.0003803 0.43725 9.57854
474 4N7C AEF 0.008184 0.42683 9.65909
475 3EJ0 11X 0.001251 0.44762 9.69388
476 4FGC PQ0 0.0004261 0.4712 9.69697
477 3CH5 GDP 0.001776 0.42215 9.72222
478 2W3L DRO 0.02452 0.41642 9.72222
479 3PNA CMP 0.02068 0.40552 9.74026
480 1W7J ADP BEF 0.001009 0.41744 9.93377
481 3BL6 FMC 0.0001475 0.44182 9.96169
482 4NAO AKG 0.02891 0.40098 9.96169
483 2NZU BG6 0.0005034 0.46117 10.2273
484 3O7B SAH 0.000001657 0.523 10.2459
485 2F5T MAL 0.0005609 0.42194 10.3004
486 1A0J BEN 0.01074 0.4255 10.3139
487 2HXW FLC 0.002155 0.46057 10.3448
488 1FP2 HMO 0.0005066 0.43273 10.3448
489 1NPL MAN 0.00723 0.42323 10.3448
490 1FP2 SAH 0.002727 0.4105 10.3448
491 2PFC PLM 0.004134 0.40805 10.3825
492 1T0S BML 0.0001939 0.51254 10.4651
493 4M51 BEZ 0.0004131 0.49657 10.728
494 3HZL 6PC 0.001479 0.47845 11.1111
495 1VBH PEP 0.001731 0.44468 11.1111
496 5A7Y SAH 0.01934 0.429 11.1111
497 4AU8 Z3R 0.01237 0.41256 11.1111
498 1JIL 485 0.001196 0.40669 11.1111
499 3EW2 BTN 0.008833 0.40397 11.1111
500 4O8A 2OP 0.001425 0.47927 11.4943
501 2OHV NHL 0.001863 0.43159 11.4943
502 3B8I OXL 0.02763 0.4201 11.4943
503 2R00 OEG 0.01571 0.4135 11.4943
504 4DN8 BMA 0.01778 0.4055 11.4943
505 1NF8 BOG 0.00789 0.42757 11.5942
506 4K30 NLG 0.004478 0.41123 11.875
507 2NVK NAP 0.0008381 0.45185 11.8774
508 2JC9 ADN 0.001499 0.4412 11.8774
509 1A5V Y3 0.001396 0.44875 12.0253
510 1I1Q TRP 0.001151 0.44012 12.6437
511 2HGS GSH 0.0007616 0.43115 12.6437
512 1YXM ADE 0.006539 0.42957 12.6437
513 1ZJ6 G3D 0.003592 0.4104 12.6437
514 1UJ5 5RP 0.0003158 0.45092 12.7753
515 1LYX PGA 0.00001016 0.501 13.0268
516 4HZO COA 0.001333 0.44336 13.0268
517 3JDW ORN 0.0003833 0.43712 13.0268
518 1YRX FMN 0.004689 0.40172 13.2231
519 2BOS GLA GAL GLC NBU 0.002115 0.46792 13.2353
520 2BOS GLA GAL GLC 0.002334 0.46455 13.2353
521 1FW1 GSH 0.0006592 0.43349 13.4259
522 1U3I GSH 0.00221 0.44006 13.7441
523 1Q11 TYE 0.004604 0.42066 13.7931
524 4NC7 I3C 0.02283 0.40583 14.1414
525 3IWD M2T 0.01375 0.42167 14.5161
526 1SOW OXL 0.01606 0.42583 14.5594
527 1TDF NAP 0.007101 0.41642 14.5594
528 1TDF FAD 0.00296 0.41516 14.5594
529 2OYS FMN 0.001207 0.40276 14.876
530 4KCF FMN 0.0006678 0.42839 15.3257
531 1JAC AMG 0.000775 0.50317 15.7895
532 3WCS MAN NAG 0.0003189 0.46952 16.5354
533 3WCS MAN NAG GAL 0.0003947 0.45296 16.5354
534 2F59 INI 0.0004939 0.42383 16.5605
535 1Y7P RIP 0.001112 0.47565 16.5919
536 3ZPG 5GP 0.005148 0.45097 16.8582
537 3DGB MUC 0.005446 0.40345 16.8582
538 1HQL GLA MBG 0.0008634 0.47259 17.1206
539 4CCN OGA 0.002384 0.445 17.1429
540 4L2I NAD 0.01312 0.40902 17.2414
541 3QV9 QV7 0.001222 0.45126 18.3908
542 4AF5 CIT 0.0009781 0.46246 18.4211
543 3W8S GSH 0.001305 0.45003 18.4466
544 2BOI MFU 0.000759 0.45366 18.5841
545 1C1L GAL BGC 0.004207 0.44038 18.9781
546 4G4S LDZ 0.001078 0.41643 19.9234
547 2FOI JPA 0.002867 0.4189 20
548 1NP0 NGT 0.01617 0.40738 20.6897
549 1UO4 PIH 0.0004649 0.51493 23.5294
550 1UO5 PIH 0.001496 0.49922 23.5294
551 4A6F SEP 0.003494 0.46852 38.3333
Pocket No.: 2; Query (leader) PDB : 1P9P; Ligand: SAH; Similar sites found: 21
This union binding pocket(no: 2) in the query (biounit: 1p9p.bio1) has 22 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3LE7 ADE 0.01164 0.4235 1.14943
2 1V59 NAD 0.008707 0.41245 1.53257
3 4UCI ADN 0.008631 0.42485 1.91571
4 5UDS ATP 0.006796 0.42185 3.06513
5 2IDO TMP 0.01244 0.41963 3.76344
6 5FUI APY 0.03271 0.40095 3.78788
7 5N53 8NB 0.02755 0.40082 3.83142
8 3HP8 SUC 0.005264 0.43874 4.54545
9 5TP0 BRN 0.01602 0.41268 5.35714
10 2Y7I ARG 0.01521 0.40482 5.36398
11 4AUA 4AU 0.009554 0.40297 5.36398
12 5APG EEM 0.0002275 0.45399 5.40541
13 4RRG A3T 0.001086 0.43702 5.67376
14 5C2N NAG 0.01374 0.41812 6.25
15 4RUS NDG 0.001103 0.45303 6.51341
16 5AHO TLA 0.007191 0.43419 6.51341
17 2BRY FAD 0.01582 0.40024 7.27969
18 5X2N ALA 0.02099 0.40652 7.66284
19 5H5F SAM 0.00001613 0.49324 8.11966
20 5EWK P34 0.01959 0.41039 10
21 5AHW CMP 0.003612 0.41818 14.2857
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