Receptor
PDB id Resolution Class Description Source Keywords
1PMH 1.06 Å EC: 3.2.1.78 CRYSTAL STRUCTURE OF CALDICELLULOSIRUPTOR SACCHAROLYTICUS CB COMPLEX WITH MANNOHEXAOSE CALDICELLULOSIRUPTOR SACCHAROLYTICUS JELLYROLL BETA-SANDWICH HYDROLASE
Ref.: HIGH-RESOLUTION CRYSTAL STRUCTURES OF CALDICELLULOS STRAIN RT8B.4 CARBOHYDRATE-BINDING MODULE CBM27-1 A COMPLEX WITH MANNOHEXAOSE. J.MOL.BIOL. V. 340 543 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA X:300;
 Part of Protein;
 none;
 submit data
40.078 Ca [Ca+2...
EDO X:401;
X:402;
X:403;
X:404;
 Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
 submit data
62.068 C2 H6 O2 C(CO)...
MAN BMA BMA BMA BMA BMA A:1;
 Valid;
 none;
 Kd = 0.1 uM
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1PMH 1.06 Å EC: 3.2.1.78 CRYSTAL STRUCTURE OF CALDICELLULOSIRUPTOR SACCHAROLYTICUS CB COMPLEX WITH MANNOHEXAOSE CALDICELLULOSIRUPTOR SACCHAROLYTICUS JELLYROLL BETA-SANDWICH HYDROLASE
Ref.: HIGH-RESOLUTION CRYSTAL STRUCTURES OF CALDICELLULOS STRAIN RT8B.4 CARBOHYDRATE-BINDING MODULE CBM27-1 A COMPLEX WITH MANNOHEXAOSE. J.MOL.BIOL. V. 340 543 2004
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 8 families.
1 1PMH Kd = 0.1 uM MAN BMA BMA BMA BMA BMA n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 8 families.
1 1PMH Kd = 0.1 uM MAN BMA BMA BMA BMA BMA n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 1PMH Kd = 0.1 uM MAN BMA BMA BMA BMA BMA n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: MAN BMA BMA BMA BMA BMA; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: MAN BMA BMA BMA BMA BMA; Similar ligands found: 1
No: Ligand Similarity coefficient
1 MAN BMA BMA BMA BMA BMA 1.0000
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1PMH; Ligand: MAN BMA BMA BMA BMA BMA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1pmh.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback