Receptor
PDB id Resolution Class Description Source Keywords
1R4A 2.3 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF GTP-BOUND ADP-RIBOSYLATION FACTOR LIKE PROTEIN 1 (ARL1) AND GRIP DOMAIN OF GOLGIN245 COMPLEX RATTUS NORVEGICUS RAS-LIKE G PROTEIN STRUCTURE THREE-HELIX GRIP DOMAIN PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS FOR RECRUITMENT OF GRIP DOMAIN GOLGIN-245 BY SMALL GTPASE ARL1. NAT.STRUCT.MOL.BIOL. V. 11 86 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:1201;
B:1202;
C:1203;
D:1204;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:901;
B:902;
C:903;
D:904;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1R4A 2.3 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF GTP-BOUND ADP-RIBOSYLATION FACTOR LIKE PROTEIN 1 (ARL1) AND GRIP DOMAIN OF GOLGIN245 COMPLEX RATTUS NORVEGICUS RAS-LIKE G PROTEIN STRUCTURE THREE-HELIX GRIP DOMAIN PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS FOR RECRUITMENT OF GRIP DOMAIN GOLGIN-245 BY SMALL GTPASE ARL1. NAT.STRUCT.MOL.BIOL. V. 11 86 2004
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 199 families.
1 1R4A - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 166 families.
1 1R4A - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1R4A - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1R4A; Ligand: GNP; Similar sites found: 493
This union binding pocket(no: 1) in the query (biounit: 1r4a.bio1) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2HF9 GSP 0.00000008743 0.63063 None
2 1GXU 2HP 0.0001012 0.52445 None
3 3LDJ SCR 0.009472 0.42301 None
4 2IL4 COA 0.006728 0.41501 None
5 1M0S CIT 0.01828 0.40977 None
6 2ZX2 RAM 0.03964 0.40136 None
7 4Q3F TLA 0.01581 0.40071 None
8 3DKP ADP 0.0001486 0.50871 1.81818
9 2ZE7 DST 0.003654 0.40951 1.81818
10 1D1Q 4NP 0.02747 0.40784 2.48447
11 4AG5 ADP 0.000002997 0.61811 3.0303
12 2RCN GDP 0.00000000008143 0.59884 3.0303
13 4H1V GNP 0.000001677 0.57309 3.0303
14 2BEK ATP 0.000562 0.44695 3.0303
15 1G8S MET 0.01865 0.4145 3.0303
16 1OYY AGS 0.001042 0.46711 3.63636
17 1JJV ATP 0.00001891 0.57385 4.24242
18 3FKQ ATP 0.00007377 0.49936 4.24242
19 1VHT BA3 0.0003771 0.4776 4.24242
20 1HTW ADP 0.00001928 0.4461 4.43038
21 1FP6 ADP 0.00003348 0.52068 4.84848
22 3EZ2 ADP 0.0001902 0.50995 4.84848
23 2GDJ ANP 0.0002145 0.50086 4.84848
24 4IDN GNP 0.0000436 0.49376 4.84848
25 2WOJ ADP ALF 0.00004384 0.46892 4.84848
26 3EWA ANP 0.00006642 0.41419 4.84848
27 1O8B ABF 0.01514 0.41393 4.84848
28 3FYH ADP 0.002484 0.41311 4.84848
29 2GWH A3P 0.007785 0.40851 4.84848
30 4LPS GDP 0.000000009668 0.70344 5.45455
31 3BFV ADP 0.000002502 0.59593 5.45455
32 1V8K ANP 0.000002644 0.59475 5.45455
33 2PL3 ADP 0.0001687 0.51258 5.45455
34 2QZ4 ADP 0.0001249 0.50011 5.45455
35 1XKV ATP 0.00005823 0.43522 5.45455
36 3QXC ATP 0.0005168 0.42888 5.45455
37 1OS1 ATP 0.00135 0.40308 5.45455
38 2X7I CIT 0.004667 0.43504 5.84416
39 2Q2Y ADP 0.0008598 0.45197 5.88235
40 2Q2Y MKR 0.0008924 0.4501 5.88235
41 1W5T ANP 0.001577 0.43175 5.88235
42 1W5T ADP 0.00295 0.42746 5.88235
43 2FAH GDP 0.0004747 0.41714 5.88235
44 4PPF FLC 0.0000005355 0.67893 6.06061
45 4YDS ATP 0.0000591 0.54319 6.06061
46 2ZR9 DTP 0.00004953 0.53217 6.06061
47 4XGU ADP 0.00007371 0.49937 6.06061
48 3KTA AP5 0.000481 0.4676 6.06061
49 4WOP CTP 0.0000452 0.46631 6.06061
50 3IIJ ADP 0.000002405 0.46196 6.06061
51 1KO8 6PG 0.0002116 0.43178 6.06061
52 1RRC ADP 0.0000007801 0.42731 6.06061
53 2JLR ANP 0.0001744 0.42284 6.06061
54 5J1S ATP 0.00293 0.4102 6.06061
55 4JLV ADP 0.00007069 0.40951 6.06061
56 2YOH WMJ 0.0004064 0.40872 6.06061
57 1XEX ATP 0.003183 0.40275 6.06061
58 5MVR ADP 0.00002821 0.43467 6.17284
59 1G7S GDP 0.0000000009401 0.75203 6.66667
60 4ZKD GDP 0.0000000001222 0.71596 6.66667
61 3LRE ADP 0.000000983 0.65124 6.66667
62 5KSP GDP 0.0000002225 0.63806 6.66667
63 5KSZ GCP 0.0000005154 0.50998 6.66667
64 1G6O ADP 0.00008507 0.50793 6.66667
65 3ZFD ANP 0.0000004677 0.50736 6.66667
66 5H56 ADP 0.00005279 0.49049 6.66667
67 5H56 TYD 0.00005279 0.49049 6.66667
68 4QOS ADP 0.0003436 0.4795 6.66667
69 3IO3 ADP 0.00001603 0.47569 6.66667
70 4OHY ANP 0.0001015 0.46943 6.66667
71 3KJI ADP 0.00001607 0.46293 6.66667
72 4V03 ADP 0.00001411 0.45592 6.66667
73 4O48 ASP 0.01383 0.42285 6.66667
74 3CV2 OXL 0.02938 0.40918 6.66667
75 4P32 ADP 0.0008228 0.43997 6.82731
76 3MD0 GDP 0.00000000005083 0.8414 7.27273
77 1D2E GDP 0.00000000598 0.69254 7.27273
78 2CBZ ATP 0.000002709 0.63352 7.27273
79 4P4T GDP 0.000001029 0.57554 7.27273
80 2XTN GTP 0.0000009769 0.55713 7.27273
81 2B8W ALF 5GP 0.000008313 0.51349 7.27273
82 5G41 AP5 0.0004573 0.46945 7.27273
83 3FB4 AP5 0.0005198 0.46139 7.27273
84 4MKF AP5 0.0008467 0.45341 7.27273
85 2JAQ DCP 0.002018 0.42008 7.27273
86 5LTJ ADP 0.000133 0.41359 7.27273
87 1YXM ADE 0.01556 0.41011 7.27273
88 1OE0 TTP 0.005975 0.40074 7.27273
89 5K5Z ANP 0.0003014 0.45027 7.84314
90 3RC3 ANP 0.01063 0.42172 7.84314
91 4KFU ACP 0.000008795 0.41588 7.84314
92 1XMV ADP 0.0001452 0.41109 7.84314
93 2F3R G5P 0.008697 0.40075 7.84314
94 4IVN BMX 0.0117 0.40054 7.84314
95 4IEE AGS 0.000198 0.50907 7.87879
96 2IXE ATP 0.000476 0.45 7.87879
97 4TMK T5A 0.004132 0.41563 7.87879
98 4GBM A3P 0.005823 0.40103 7.87879
99 1SKQ GDP 0.0000000009576 0.77711 8.48485
100 4LC1 GDP 0.000000001559 0.75357 8.48485
101 5HCN GCP 0.000000000911 0.75269 8.48485
102 5KUT GDP 0.000000004168 0.56388 8.48485
103 1NN5 ANP 0.0001482 0.47347 8.48485
104 1YTM ATP 0.0003494 0.45992 8.48485
105 4MKG AP5 0.0006964 0.45592 8.48485
106 1LVG ADP 0.0000004894 0.45565 8.48485
107 5I34 GDP 0.00001818 0.45067 8.48485
108 3TMK T5A 0.0002429 0.42623 8.48485
109 2QG6 NMN 0.0006646 0.41794 8.48485
110 3U6B GDP 0.00000000004246 0.84535 9.09091
111 4G5G GDP 0.0000000001255 0.80738 9.09091
112 2BVN GNP 0.00000000002385 0.80255 9.09091
113 3U6K GDP 0.0000000003255 0.78703 9.09091
114 5IRR GSP 0.000000004278 0.66275 9.09091
115 3B9Q MLI 0.000001567 0.632 9.09091
116 3PQC GDP 0.0000003047 0.62264 9.09091
117 1JWY GDP 0.0000004302 0.60739 9.09091
118 1D8T GDP 0.00000000007899 0.5986 9.09091
119 5JBQ GDP 0.00000000008067 0.59848 9.09091
120 4P3Y GDP 0.00000000002954 0.59581 9.09091
121 2HCJ GDP 0.00000000004588 0.59171 9.09091
122 4BQS ADP 0.00001998 0.55156 9.09091
123 1JWY ADP 0.00001651 0.54827 9.09091
124 5VGR GDP 0.0005212 0.46126 9.09091
125 4BQS K2Q 0.0005523 0.45523 9.09091
126 1UJ2 ADP 0.0007686 0.43729 9.09091
127 1UJ2 C5P 0.0008371 0.43577 9.09091
128 5GJC ATP 0.00004189 0.42105 9.09091
129 4PX9 ADP 0.0001029 0.40639 9.09091
130 4NCN GTP 0.00000000003187 0.74258 9.69697
131 4TMZ GSP 0.00000000008159 0.7257 9.69697
132 4A4Z ANP 0.001468 0.45977 9.69697
133 1R0X ATP 0.0002458 0.40122 9.69697
134 3E70 GDP 0.0000004061 0.49935 9.80392
135 4YS0 ADP 0.000652 0.4569 9.80392
136 3CNL GNP 0.0000000004254 0.79488 10.303
137 1SQ5 ADP 0.00001384 0.55195 10.303
138 2ZTS ADP 0.0007583 0.44959 10.303
139 4GOX A3P 0.001661 0.42358 10.303
140 1NY5 ADP 0.001213 0.40138 10.303
141 1F2U ATP 0.001675 0.42342 10.7383
142 4A6F SEP 0.009662 0.41317 10.8333
143 1PUJ GNP 0.0000000001893 0.63238 10.9091
144 5M04 GDP 0.00000000001292 0.60705 10.9091
145 1H65 GDP 0.00001452 0.5139 10.9091
146 1NJF AGS 0.0004179 0.43422 10.9091
147 1NJF ADP 0.000287 0.42839 10.9091
148 5HR5 ADP 0.0003546 0.41689 10.9091
149 5HR5 FLC 0.00679 0.40528 10.9091
150 4KVG GTP 0.0000000000795 0.72038 11.5152
151 3X1Z GNP 0.0000000001581 0.71444 11.5152
152 1GUA GNP 0.00000000006753 0.68958 11.5152
153 1GOJ ADP 0.0000005064 0.66769 11.5152
154 4R43 GDP 0.0003969 0.48772 11.5152
155 2J5V PCA 0.02805 0.41123 11.5152
156 1R6B ADP 0.0004454 0.40099 11.5152
157 3TK1 GDP 0.00000000005188 0.85668 11.7647
158 2QN6 GDP 0.0000000000675 0.83519 11.7647
159 1YRB GDP 0.0000000006061 0.73813 11.7647
160 4RD0 GDP 0.000000000007742 0.73316 11.7647
161 2AWN ADP 0.0000003226 0.69494 11.7647
162 3T34 GDP 0.000005116 0.5274 11.7647
163 2OBM ADP 0.0003108 0.51442 11.7647
164 5L3W GDP 0.000002684 0.48346 11.7647
165 3DZD ADP 0.0006754 0.46084 11.7647
166 1ION ADP 0.00002793 0.44936 11.7647
167 3BER AMP 0.002937 0.44494 11.7647
168 1UKZ ADP 0.001513 0.43404 11.7647
169 4PU6 ASP 0.009516 0.42886 11.7647
170 4QRH 0O2 0.0004794 0.42458 11.7647
171 5IFS ADP 0.0002291 0.41411 11.7647
172 3EC1 GDP 0.00000000117 0.58187 12.1212
173 2ZPA ADP 0.0002122 0.4319 12.1212
174 5GOE GDP 0.0000000009029 0.74122 12.7273
175 2FNA ADP 0.0001181 0.47552 12.7273
176 4E03 ADP 0.00004323 0.43584 12.7273
177 1F9V ADP 0.00001153 0.41322 12.7273
178 5LB3 ADP 0.00007988 0.40899 12.7273
179 4TO8 FLC 0.02386 0.4009 12.7273
180 2VOH CIT 0.01694 0.41436 12.7389
181 3FVQ ATP 0.0004706 0.45435 13.3333
182 4D81 ADP 0.0002741 0.41813 13.3333
183 4B47 GDP 0.00000000003238 0.85128 13.7255
184 2UZI GTP 0.00000000003762 0.73362 13.7255
185 1LFD GNP 0.00000000006275 0.72456 13.7255
186 1CLU DBG 0.0000000008589 0.71462 13.7255
187 2C5L GTP 0.00000000004261 0.69711 13.7255
188 1WDT GTP 0.000000002453 0.69072 13.7255
189 3KUD GDP 0.000000001986 0.68556 13.7255
190 3DDC GNP 0.00000000008942 0.68509 13.7255
191 1WQ1 AF3 0.0000002821 0.67938 13.7255
192 2W58 ADP 0.000001108 0.65956 13.7255
193 1WQ1 GDP 0.000000008338 0.64264 13.7255
194 3Q85 GNP 0.00000000001337 0.61967 13.7255
195 3DC4 ADP 0.000002228 0.61688 13.7255
196 1W7J ADP BEF 0.000002319 0.56676 13.7255
197 5I0H ADP BEF 0.0000004147 0.54225 13.7255
198 4TTQ ATP 0.00006929 0.525 13.7255
199 1IHU AF3 0.00005214 0.49049 13.7255
200 3B7G ANP 0.000305 0.48747 13.7255
201 1IHU ADP 0.00006707 0.48121 13.7255
202 2C9O ADP 0.0003348 0.46071 13.7255
203 2QEN ADP 0.00007309 0.44536 13.7255
204 3P4X ADP 0.00001938 0.42772 13.7255
205 1CR1 TTP 0.0006716 0.42045 13.7255
206 4KVA GTP 0.00003775 0.40769 13.7255
207 2NCD ADP 0.000001246 0.63714 13.9394
208 4XTR ATP 0.00008078 0.46783 13.9394
209 4XVU ATP 0.00008822 0.46634 13.9394
210 4XTR ADP 0.00008742 0.44852 13.9394
211 5M7P ADP 0.0007355 0.41469 13.9394
212 1OFH ADP 0.0005383 0.40398 13.9394
213 2XT3 ADP 0.000002777 0.62395 14.5455
214 3FWY ADP 0.00001382 0.47303 14.5455
215 1BG2 ADP 0.000004514 0.40125 14.5455
216 2OFW ADX 0.00004992 0.5039 15.1515
217 2PEZ DAT 0.00004646 0.49619 15.1515
218 2PEZ GGZ 0.00004646 0.49619 15.1515
219 2OZE AGS 0.000271 0.43142 15.1515
220 3WYA GDP 0.00000000002489 0.84193 15.6863
221 4J0Q GDP 0.00000000009264 0.82826 15.6863
222 3WY9 GDP 0.0000000001498 0.81773 15.6863
223 3Q72 GNP 0.0000000001211 0.58291 15.6863
224 1YQT ADP 0.00001606 0.57909 15.6863
225 2WHX ADP 0.0000216 0.57261 15.6863
226 2C04 GCP 0.000006255 0.54744 15.6863
227 4LYA ATP 0.00006829 0.51867 15.6863
228 4Q1A UDP 0.00199 0.48697 15.6863
229 4Q1A 2XZ 0.00199 0.48697 15.6863
230 3H86 AP5 0.0006374 0.45125 15.6863
231 3QKT ANP 0.001159 0.42654 15.6863
232 2ZJ5 ADP 0.02658 0.40852 15.6863
233 4HDQ GNP 0.0000000001832 0.70875 15.7576
234 4HDO GNP 0.00000000007467 0.68811 15.7576
235 2IYL GDP 0.0000004475 0.6327 15.7576
236 3UIE ANP 0.00001962 0.53781 15.7576
237 1SVI GDP 0.000000006084 0.53741 15.7576
238 2BIF ANP 0.000584 0.45148 15.7576
239 2BIF SIN 0.001074 0.45113 15.7576
240 3RLF ANP 0.0006232 0.44119 15.7576
241 5TSH ANP 0.00001894 0.43114 15.7576
242 1BO4 COA 0.006741 0.42716 15.7576
243 2PS1 ORO 0.02358 0.40414 15.7576
244 5TSH ADP 0.00002736 0.40177 15.7576
245 2VF7 ADP 0.0003442 0.40169 15.7576
246 2WKQ GTP 0.000000001844 0.66973 16.3636
247 5E95 GDP 0.0000000006552 0.72598 16.4948
248 1WF3 GNP 0.000000001407 0.67246 16.9697
249 2W2X GSP 0.000000000277 0.6646 17.5758
250 4HI0 GDP 0.00000002288 0.6399 17.5758
251 4U5X GNP 0.0000000009965 0.63029 17.5758
252 2J0V GDP 0.000000007494 0.55515 17.5758
253 3A4M ADP 0.000001398 0.62735 17.6471
254 4PFO ADP 0.000009325 0.5137 17.6471
255 2V7Q ATP 0.00007574 0.5103 17.6471
256 1XP8 AGS 0.0002056 0.50825 17.6471
257 5FTB ANP 0.0001589 0.49521 17.6471
258 5XDR ADP 0.0002186 0.49441 17.6471
259 2V7Q ADP 0.0004363 0.4857 17.6471
260 5FHD ADP ALF 0.0002691 0.4648 17.6471
261 4IOK ADP 0.0002476 0.45922 17.6471
262 4IOK XPO 0.0001896 0.45843 17.6471
263 4WEI GLC GAL 0.004874 0.45108 17.6471
264 2CK3 ANP 0.001601 0.43534 17.6471
265 1W0J ADP 0.0001026 0.43403 17.6471
266 2CK3 ADP 0.002473 0.41643 17.6471
267 1W0J ADP BEF 0.00162 0.40159 17.6471
268 4DKX GDP 0.00000000003692 0.83351 18.7879
269 1TQ4 GDP 0.000000003595 0.67448 18.7879
270 5L3S GNP 0.00000139 0.54499 18.7879
271 5L3V GDP 0.0000001673 0.52057 18.7879
272 1Y63 ADP 0.00000368 0.58769 19.3939
273 1DS6 GDP 0.000000003133 0.55666 19.3939
274 2CHG ANP 0.0008972 0.45068 19.3939
275 2C78 GNP 0.00000000001111 0.77175 19.6078
276 2C77 GNP 0.00000000001147 0.71442 19.6078
277 3NHB ADP 0.000008004 0.59561 19.6078
278 4PC3 GDP 0.000000002948 0.59179 19.6078
279 1G3Q ADP 0.000002129 0.59097 19.6078
280 5L3R GCP 0.0000002937 0.57236 19.6078
281 1P9B GDP 0.00005203 0.50616 19.6078
282 4HSE ADP 0.0001631 0.50052 19.6078
283 3VX3 ADP 0.00005274 0.50045 19.6078
284 5N69 ADP 0.000002328 0.4874 19.6078
285 2GK6 ADP 0.001424 0.47165 19.6078
286 1FNN ADP 0.0003039 0.46704 19.6078
287 1IN4 ADP 0.0005541 0.45558 19.6078
288 3N29 GOL 0.02428 0.42799 19.6078
289 1P9B HDA 0.01244 0.42552 19.6078
290 2XAU ADP 0.0003649 0.40593 19.6078
291 3R7F CP 0.02424 0.40984 20
292 1XTQ GDP 0.0000000003897 0.67893 20.6061
293 3T5G GDP 0.000000001052 0.59358 20.6061
294 1NHX FTB 0.00471 0.42411 20.6061
295 1NHX PEP 0.004492 0.42404 20.6061
296 2XTZ GSP 0.00000000002597 0.74018 21.2121
297 1Z6T ADP 0.0001695 0.48315 21.2121
298 1RJ9 GCP 0.000009579 0.40995 21.2121
299 3VMF GTP 0.000000000197 0.70431 21.5686
300 3WXM GTP 0.0000000003896 0.69223 21.5686
301 4CVN ADP 0.000006632 0.59236 21.5686
302 1KK8 BEF ADP 0.00001575 0.52944 21.5686
303 1B7T ADP 0.0000496 0.51892 21.5686
304 1K6M AGS 0.0001403 0.46796 21.5686
305 2D7I NGA 0.03187 0.40144 21.5686
306 2ZEJ GDP 0.00000004432 0.61105 21.8182
307 1X1R GDP 0.0000000006942 0.65124 21.9101
308 2CE7 ADP 0.0002255 0.41241 22.4242
309 2Z48 A2G 0.02255 0.41695 23.0303
310 4IHQ ADP 0.00005729 0.41045 23.0303
311 2CJW GDP 0.000000000002068 0.89507 23.5294
312 2HT6 GDP 0.000000000003901 0.6198 23.5294
313 1ZUI SKM 0.0001111 0.48482 23.5294
314 1QF5 RPL 0.002371 0.47153 23.5294
315 3ZIA ATP 0.0001032 0.41964 23.5294
316 3ZIA ADP 0.0002875 0.41675 23.5294
317 3ZQ6 ADP ALF 0.000009848 0.51486 23.6364
318 1AZT GSP 0.000000000005971 0.70013 24.2424
319 1M7B GTP 0.0000000009448 0.69944 24.2424
320 1CS4 GSP 0.00000000002718 0.69023 24.2424
321 1CXZ GSP 0.0000000003707 0.67097 24.2424
322 1GWN GTP 0.000000000973 0.64625 24.2424
323 3REF GDP 0.00000001327 0.64201 24.2424
324 1M7G ADX 0.0001319 0.47559 24.8485
325 1M7G ADP 0.0001398 0.4712 24.8485
326 1M7G AV2 0.000003228 0.4471 24.8485
327 1G7C 5GP 0.00000003379 0.68788 25.4902
328 5FG3 GDP 0.0000000001019 0.58169 25.4902
329 2IS6 ADP 0.0001538 0.50798 25.4902
330 1X6V ADP 0.0001435 0.43643 25.4902
331 3QF7 ANP 0.0003645 0.42364 25.4902
332 4OI4 ATP 0.001755 0.42259 25.4902
333 3BFX A3P 0.007413 0.40605 25.4902
334 5BQ5 ADP BEF 0.0001244 0.50018 26.0606
335 3ZS9 ADP ALF 0.0000352 0.47247 26.3158
336 1TAD ALF 0.000000000009132 0.76866 26.6667
337 1TAD GDP 0.000000000009132 0.76866 26.6667
338 1GOT GDP 0.000000008887 0.64936 26.6667
339 1DAR GDP 0.0000000007836 0.57231 26.6667
340 1QHG ATP 0.003008 0.43107 26.6667
341 3DEF GDP 0.00000118 0.58729 27.451
342 3Q9L ATP 0.00002213 0.52281 27.451
343 4RZ3 ADP 0.00002658 0.46278 27.451
344 2VVG ADP 0.000001076 0.41819 27.451
345 4ZNL BEF ADP 0.0002191 0.40814 27.451
346 1FQJ ALF 0.00000002041 0.73332 27.8788
347 3CX8 GSP 0.000000000005469 0.7016 27.8788
348 1FQK ALF 0.0000001185 0.70095 27.8788
349 1FQJ GDP 0.0000000007532 0.6858 27.8788
350 1ZCB GDP 0.0000000009973 0.67559 27.8788
351 1FQK GDP 0.000000001517 0.67323 27.8788
352 3AB3 GDP 0.00000001366 0.59881 27.8788
353 2ODE ALF GDP 0.000000000006684 0.77427 28.4848
354 1BH2 GSP 0.00000000002063 0.68225 28.4848
355 5KDO GDP 0.000000003481 0.67508 28.4848
356 2OM2 GDP 0.000000006022 0.66484 28.4848
357 1Y3A GDP 0.000000002887 0.66168 28.4848
358 1GP2 GDP 0.00000001223 0.63576 28.4848
359 1SVK ALF GDP 0.000000000001886 0.80025 29.0909
360 1NVU GTP 0.00000000002891 0.74162 29.4118
361 1I4D GDP 0.000000021 0.70948 29.4118
362 1NVV GNP 0.00000000006448 0.69031 29.4118
363 4ZG4 VO4 ADP 0.0000002458 0.56725 29.4118
364 4D0G GTP 0.00000000007166 0.69672 29.697
365 1QHH ATP 0.007039 0.42196 30.1775
366 2GJ8 ALF GDP 0.0000000002048 0.67098 30.303
367 2FFQ GSP 0.00000000002075 0.74752 30.9091
368 5JCP GDP ALF 0.000000003961 0.69092 31.3725
369 1TX4 ALF GDP 0.000000001629 0.67195 31.3725
370 1KMQ GNP 0.0000000008604 0.666 31.3725
371 4XOI GTP 0.00000000148 0.66552 31.3725
372 2OG2 MLI 0.0000007355 0.65184 31.3725
373 4XSH GSP 0.000000004533 0.60894 31.3725
374 1KK1 GNP 0.0000000002882 0.57346 31.3725
375 1OW3 GDP 0.00000005516 0.56111 31.3725
376 5HPY GDP 0.00000005331 0.56093 31.3725
377 4WZA ACP 0.00001526 0.54848 31.3725
378 4WZA ADP 0.00001532 0.54841 31.3725
379 4D0N GDP 0.000000007342 0.54454 31.3725
380 5IRC GDP 0.0000001284 0.53121 31.3725
381 5MZN ADP 0.001419 0.47172 31.3725
382 5IRN ADP 0.00007637 0.43638 31.3725
383 3MJH GTP 0.00000000001172 0.73382 31.5152
384 2Y8E GNP 0.00000000001243 0.73263 31.5152
385 1D5C GDP 0.000000001444 0.71058 32.0988
386 1TU3 GNP 0.00000000003373 0.73555 32.1212
387 5CK5 GDP 0.0000000002021 0.57517 32.1212
388 3T12 GDP ALF 0.0000000000357 0.75037 32.7273
389 2EFE GNH 0.000000001272 0.72337 32.7273
390 3T1O GDP 0.000000002262 0.58659 32.7273
391 5TAR GDP 0.00000000005191 0.78706 33.3333
392 4K81 GTP 0.000000000003466 0.78279 33.3333
393 3E5H GNP 0.00000000003529 0.73476 33.3333
394 2WMO GTP 0.000000001407 0.73218 33.3333
395 5UQW GDP 0.0000000004536 0.68634 33.3333
396 5O2T GSP 0.00000000008989 0.68519 33.3333
397 4DID GDP 0.00000002682 0.68217 33.3333
398 1A4R GDP 0.000000004871 0.67763 33.3333
399 1A4R GNH 0.000000009106 0.6747 33.3333
400 3LXR GDP 0.00000003837 0.66484 33.3333
401 5TB5 GDP 0.00000000004743 0.63753 33.3333
402 4YC7 GNP 0.000000002912 0.63586 33.3333
403 1GRN GDP 0.00000007197 0.63442 33.3333
404 1NF3 GNP 0.000000008899 0.62213 33.3333
405 2GCN GDP 0.00000002116 0.60175 33.3333
406 1GRN AF3 0.000004613 0.60052 33.3333
407 2GCO GNP 0.000000003543 0.60037 33.3333
408 2NGR GDP 0.00000001977 0.54606 33.3333
409 4ITR GDP 0.0000003848 0.53655 33.3333
410 2DPY ADP 0.0001676 0.51976 33.3333
411 1F5N GNP 0.000008623 0.49575 33.3333
412 2NGR AF3 0.000001655 0.45253 33.3333
413 2FH5 GTP 0.000000000002368 0.81133 35.1515
414 4WZ6 ATP 0.00001451 0.58148 35.2941
415 2VB6 ADP BEF 0.00001122 0.50169 35.2941
416 1G41 ADP 0.0003627 0.47839 35.2941
417 4FRZ ADP 0.00001159 0.41526 35.2941
418 2PZE ATP 0.000002318 0.41362 35.2941
419 3H4S ADP 0.000004526 0.4135 35.2941
420 2EW1 GNP 0.000000000006362 0.74972 36.3636
421 4QM7 GTP 0.000003624 0.45127 37.2549
422 2Y65 ADP 0.00001453 0.40163 37.2549
423 3GJX GTP 0.000000000144 0.71305 38.1818
424 3GJ0 GDP 0.0000000001224 0.80792 38.7879
425 3GJ4 GDP 0.0000000001438 0.80448 38.7879
426 3GJ7 GDP 0.0000000001634 0.80175 38.7879
427 3GJ8 GDP 0.0000000001304 0.79321 38.7879
428 3CH5 GDP 0.0000000001799 0.78651 38.7879
429 5UWP GNP 0.00000000003924 0.73937 38.7879
430 4HAT GNP 0.00000000004338 0.73758 38.7879
431 5UWR GNP 0.0000000000372 0.73713 38.7879
432 5UWT GNP 0.00000000003842 0.73656 38.7879
433 5UWI GNP 0.00000000003923 0.73619 38.7879
434 5UWU GNP 0.00000000003924 0.73619 38.7879
435 5DIF GNP 0.00000000004137 0.73524 38.7879
436 5UWS GNP 0.00000000005014 0.73498 38.7879
437 5DHF GNP 0.00000000004357 0.73432 38.7879
438 5DI9 GNP 0.00000000005743 0.73256 38.7879
439 5UWQ GNP 0.00000000003073 0.70218 38.7879
440 5UWO GNP 0.00000000003283 0.70109 38.7879
441 5UWW GNP 0.00000000004093 0.69765 38.7879
442 5UWJ GNP 0.00000000004144 0.69742 38.7879
443 5UWH GNP 0.00000000004154 0.69736 38.7879
444 1IBR GNP 0.0000000000851 0.6859 38.7879
445 3RWO GDP 0.0000000024 0.66004 38.7879
446 5BXQ GDP 0.0000000001057 0.60966 38.7879
447 3GJ5 GDP 0.0000000001901 0.60341 38.7879
448 3GJ3 GDP 0.0000000001115 0.59797 38.7879
449 1ZC3 GNP 0.00000000001947 0.74866 39.3939
450 3WYF GTP 0.00000000007371 0.72809 39.3939
451 3M1I GTP 0.00000000007316 0.72509 39.3939
452 3WYG GTP 0.00000000008563 0.67231 39.3939
453 1KAO GDP 0.000000006072 0.58884 39.521
454 2BME GNP 0.00000000000553 0.76757 40
455 2D7C GTP 0.0000000000501 0.72855 40
456 1UAD GNP 0.00000000008994 0.71819 40
457 1U8Z GDP 0.0000000002357 0.70666 40
458 2A9K GDP 0.000000002387 0.6049 40
459 1G16 GDP 0.00000003314 0.59303 40.6061
460 1MH1 GNP 0.0000000003343 0.69805 41.1765
461 3SBD GNP 0.000000001355 0.65374 41.1765
462 2FJU GSP 0.000000001225 0.64109 41.1765
463 1E96 GTP 0.000000004931 0.63206 41.1765
464 1RYH GNP 0.0000000005068 0.60688 41.1765
465 1HE1 GDP 0.0000003582 0.58851 41.1765
466 1G4U GDP 0.0000005987 0.58586 41.1765
467 1HE1 AF3 0.00007885 0.53671 41.1765
468 1G4U AF3 0.0008848 0.48549 41.1765
469 4DCT GDP 0.000000000686 0.7586 41.2121
470 2HV8 GTP 0.0000000001653 0.70742 41.8182
471 2F9L GDP 0.00000001075 0.63808 41.8182
472 4LX0 BEF GDP 0.00000000001551 0.75271 42.4242
473 1EK0 GNP 0.00000000003703 0.71417 42.4242
474 5JCZ GDP 0.000000001525 0.69979 42.4242
475 3CPJ GDP 0.000000003564 0.58836 42.4242
476 5WDR GNP 0.00000000009068 0.72127 42.6901
477 1KY3 GDP 0.000000000743 0.60854 43.0303
478 5J1J ANP 0.00003438 0.48269 43.1373
479 3RAB GNP 0.00000000001839 0.7463 44.2424
480 5UFQ GNP 0.0000000004446 0.6899 44.2424
481 4DSU GDP 0.0000000006125 0.68727 44.2424
482 1MKY GDP 0.000000000004161 0.63547 44.2424
483 5XCO GDP 0.0000000008452 0.60921 44.2424
484 3TNF GNP 0.00000000001458 0.75709 44.8485
485 3QBT GNP 0.000000000005264 0.74743 44.8485
486 4LHW GNP 0.0000000001197 0.69469 44.8485
487 3SFV GDP 0.000000001752 0.63078 45.4545
488 5SZH GNP 0.000000000009376 0.76167 46.0606
489 3TKL GTP 0.00000000004319 0.72775 46.0606
490 3NKV GNP 0.00000000002873 0.71865 46.0606
491 2G77 GDP 0.00000000003034 0.78584 47.8788
492 3BC1 GNP 0.00000000001105 0.75532 47.8788
493 2G77 AF3 0.0000001057 0.69515 47.8788
Pocket No.: 2; Query (leader) PDB : 1R4A; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1r4a.bio1) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1R4A; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1r4a.bio1) has 22 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1R4A; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1r4a.bio1) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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