Receptor
PDB id Resolution Class Description Source Keywords
1TYU 1.8 Å NON-ENZYME: TOXIN_VIRAL STRUCTURE OF TAILSPIKE-PROTEIN ENTEROBACTERIA PHAGE P22 COMPLEX VIRAL ADHESION PROTEIN RECEPTOR ENDOGLYCOSIDASE CARBOHYDRATE CELL RECEPTOR RECOGNITION BINDING PROTEIN LIPOPOLYSACCHARIDE
Ref.: CRYSTAL STRUCTURE OF PHAGE P22 TAILSPIKE PROTEIN CO WITH SALMONELLA SP. O-ANTIGEN RECEPTORS. PROC.NATL.ACAD.SCI.USA V. 93 10584 1996
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
RAM MAN GLA TYV RAM MAN GLA TYV B:1;
Valid;
none;
submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1TYU 1.8 Å NON-ENZYME: TOXIN_VIRAL STRUCTURE OF TAILSPIKE-PROTEIN ENTEROBACTERIA PHAGE P22 COMPLEX VIRAL ADHESION PROTEIN RECEPTOR ENDOGLYCOSIDASE CARBOHYDRATE CELL RECEPTOR RECOGNITION BINDING PROTEIN LIPOPOLYSACCHARIDE
Ref.: CRYSTAL STRUCTURE OF PHAGE P22 TAILSPIKE PROTEIN CO WITH SALMONELLA SP. O-ANTIGEN RECEPTORS. PROC.NATL.ACAD.SCI.USA V. 93 10584 1996
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 64 families.
1 1TYW - RAM MAN GLA TYV RAM GLC MAN GLA TYV n/a n/a
2 1TYU - RAM MAN GLA TYV RAM MAN GLA TYV n/a n/a
3 1TYX - RAM MAN GLA ABE RAM MAN GLA ABE n/a n/a
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 44 families.
1 1TYW - RAM MAN GLA TYV RAM GLC MAN GLA TYV n/a n/a
2 1TYU - RAM MAN GLA TYV RAM MAN GLA TYV n/a n/a
3 1TYX - RAM MAN GLA ABE RAM MAN GLA ABE n/a n/a
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 36 families.
1 1TYW - RAM MAN GLA TYV RAM GLC MAN GLA TYV n/a n/a
2 1TYU - RAM MAN GLA TYV RAM MAN GLA TYV n/a n/a
3 1TYX - RAM MAN GLA ABE RAM MAN GLA ABE n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: RAM MAN GLA TYV RAM MAN GLA TYV; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: RAM MAN GLA TYV RAM MAN GLA TYV; Similar ligands found: 3
No: Ligand Similarity coefficient
1 RAM MAN GLA TYV RAM MAN GLA TYV 1.0000
2 RAM MAN GLA ABE RAM MAN GLA ABE 0.9250
3 RAM MAN GLA TYV RAM GLC MAN GLA TYV 0.8635
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1TYU; Ligand: RAM MAN GLA TYV RAM MAN GLA TYV; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1tyu.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback