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Receptor
PDB id Resolution Class Description Source Keywords
1U2G 2.2 Å EC: 1.6.1.2 TRANSHYDROGENASE (DI.ADPR)2(DIII.NADPH)1 ASYMMETRIC COMPLEX RHODOSPIRILLUM RUBRUM NAD(P) TRANSHYDROGENASE SUBUNITS NAD+ NADP+ OXIDOREDUCTAS
Ref.: ACTIVE-SITE CONFORMATIONAL CHANGES ASSOCIATED WITH TRANSFER IN PROTON-TRANSLOCATING TRANSHYDROGENASE. BIOCHEMISTRY V. 43 10952 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
APR A:500;
B:600;
Valid;
Valid;
none;
none;
submit data
559.316 C15 H23 N5 O14 P2 c1nc(...
GOL B:401;
Invalid;
none;
submit data
92.094 C3 H8 O3 C(C(C...
NDP C:400;
Valid;
none;
submit data
745.421 C21 H30 N7 O17 P3 c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1NM5 2.4 Å EC: 1.6.1.2 R. RUBRUM TRANSHYDROGENASE (DI.Q132N)2(DIII)1 ASYMMETRIC COM RHODOSPIRILLUM RUBRUM ASYMMETRIC COMPLEX ROSSMAN DOMAIN OXIDOREDUCTASE
Ref.: GLUTAMINE 132 IN THE NAD(H)-BINDING COMPONENT OF PROTON-TRANSLOCATING TRANSHYDROGENASE TETHERS THE NUCLEOTIDES BEFORE HYDRIDE TRANSFER. BIOCHEMISTRY V. 42 1217 2003
Members (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 1U28 - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
2 1NM5 Kd = 20 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
3 1HZZ Kd = 30 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
4 1U2G - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
5 2FSV Kd ~ 20 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
70% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 2OOR Kd = 300 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
2 1U28 - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
3 1NM5 Kd = 20 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
4 1HZZ Kd = 30 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
5 1U2G - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
6 2FSV Kd ~ 20 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
50% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 2OOR Kd = 300 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
2 1U28 - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
3 1NM5 Kd = 20 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
4 1HZZ Kd = 30 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
5 1U2G - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
6 2FSV Kd ~ 20 uM NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: APR; Similar ligands found: 398
No: Ligand ECFP6 Tc MDL keys Tc
1 APR 1 1
2 AR6 1 1
3 A2D 0.898551 0.971831
4 BA3 0.847222 0.971831
5 B4P 0.835616 0.971831
6 AP5 0.835616 0.971831
7 M33 0.813333 0.958333
8 ADP 0.810811 0.971831
9 ADV 0.805195 0.958904
10 RBY 0.805195 0.958904
11 HEJ 0.802632 0.971831
12 ATP 0.802632 0.971831
13 AT4 0.8 0.932432
14 AN2 0.8 0.958333
15 5FA 0.792208 0.971831
16 AQP 0.792208 0.971831
17 AD9 0.782051 0.945205
18 AGS 0.782051 0.92
19 SAP 0.782051 0.92
20 ACP 0.779221 0.945205
21 A 0.753425 0.943662
22 AMP 0.753425 0.943662
23 3OD 0.747126 0.972222
24 PRX 0.746835 0.893333
25 9X8 0.744186 0.945946
26 OAD 0.744186 0.972222
27 CA0 0.74359 0.972222
28 ADX 0.74359 0.873418
29 ACQ 0.740741 0.945205
30 ANP 0.740741 0.945205
31 A22 0.738095 0.958333
32 50T 0.734177 0.931507
33 A2R 0.72619 0.985915
34 ABM 0.723684 0.917808
35 ATF 0.722892 0.932432
36 A1R 0.72093 0.907895
37 ADQ 0.72093 0.972222
38 A3R 0.72093 0.907895
39 6YZ 0.714286 0.945205
40 A12 0.705128 0.932432
41 AP2 0.705128 0.932432
42 SRA 0.697368 0.893333
43 5AL 0.690476 0.958333
44 APC 0.682927 0.932432
45 AU1 0.679012 0.945205
46 TAT 0.678571 0.932432
47 T99 0.678571 0.932432
48 SRP 0.674419 0.932432
49 BIS 0.67033 0.907895
50 25L 0.663043 0.958333
51 4AD 0.662921 0.945946
52 DLL 0.655556 0.958333
53 00A 0.655556 0.907895
54 ADP PO3 0.654762 0.943662
55 8QN 0.651685 0.958333
56 5SV 0.651685 0.848101
57 OOB 0.651685 0.958333
58 25A 0.651685 0.944444
59 DQV 0.649485 0.958333
60 PAJ 0.644444 0.909091
61 AMO 0.644444 0.958904
62 MAP 0.640449 0.92
63 OMR 0.64 0.875
64 AFH 0.639175 0.909091
65 AHX 0.637363 0.896104
66 FYA 0.634409 0.905405
67 3UK 0.630435 0.945205
68 NAX 0.63 0.873418
69 G3A 0.628866 0.896104
70 SON 0.626506 0.932432
71 ALF ADP 0.625 0.87013
72 ADP ALF 0.625 0.87013
73 B5V 0.623656 0.932432
74 PR8 0.623656 0.873418
75 WAQ 0.623656 0.907895
76 LAD 0.623656 0.884615
77 G5P 0.622449 0.896104
78 GAP 0.62069 0.918919
79 LMS 0.620253 0.82716
80 48N 0.62 0.921053
81 ADP VO4 0.617977 0.931507
82 VO4 ADP 0.617977 0.931507
83 AP0 0.617647 0.896104
84 ME8 0.617021 0.8625
85 TXA 0.617021 0.958904
86 PTJ 0.617021 0.896104
87 1ZZ 0.617021 0.8625
88 NB8 0.617021 0.921053
89 GTA 0.616162 0.8625
90 FA5 0.614583 0.932432
91 TXD 0.613861 0.907895
92 NAI 0.613861 0.907895
93 6V0 0.613861 0.896104
94 DND 0.613861 0.958904
95 NXX 0.613861 0.958904
96 TXE 0.607843 0.907895
97 DAL AMP 0.604396 0.931507
98 9SN 0.604167 0.896104
99 UP5 0.598039 0.92
100 YAP 0.597938 0.92
101 B5Y 0.597938 0.92
102 B5M 0.597938 0.92
103 9ZD 0.597826 0.907895
104 9ZA 0.597826 0.907895
105 XAH 0.591837 0.839506
106 RAB 0.589041 0.84507
107 ADN 0.589041 0.84507
108 XYA 0.589041 0.84507
109 2A5 0.586207 0.893333
110 4UV 0.585859 0.92
111 AOC 0.585366 0.821918
112 ADJ 0.584906 0.875
113 7D4 0.581395 0.88
114 ITT 0.581395 0.916667
115 A4P 0.580952 0.821429
116 ATR 0.579545 0.943662
117 PAP 0.579545 0.957747
118 CNA 0.579439 0.932432
119 ADP BMA 0.578947 0.945205
120 5AS 0.576471 0.77907
121 4UU 0.574257 0.92
122 GA7 0.574257 0.906667
123 F2R 0.574074 0.864198
124 5N5 0.573333 0.819444
125 7D3 0.571429 0.88
126 4TC 0.571429 0.896104
127 139 0.570093 0.873418
128 T5A 0.570093 0.841463
129 COD 0.568807 0.811765
130 JB6 0.56701 0.883117
131 A4D 0.565789 0.819444
132 5CD 0.565789 0.805556
133 EP4 0.564103 0.753247
134 LAQ 0.563107 0.8625
135 NA7 0.5625 0.932432
136 TYM 0.561905 0.932432
137 80F 0.558559 0.864198
138 YLP 0.557692 0.841463
139 A A 0.556701 0.917808
140 G5A 0.555556 0.77907
141 HFD 0.555556 0.92
142 4UW 0.552381 0.884615
143 ATP A A A 0.55 0.930556
144 AVV 0.547368 0.896104
145 A3P 0.546512 0.943662
146 MYR AMP 0.545455 0.839506
147 7D5 0.54321 0.853333
148 G1R 0.542553 0.907895
149 YLC 0.542056 0.8625
150 UPA 0.542056 0.907895
151 YLB 0.542056 0.841463
152 NAD 0.540541 0.931507
153 TYR AMP 0.539216 0.894737
154 AMP DBH 0.539216 0.918919
155 TAD 0.538462 0.884615
156 DTA 0.5375 0.786667
157 M2T 0.5375 0.734177
158 3DH 0.536585 0.773333
159 AYB 0.536364 0.831325
160 EAD 0.533898 0.873418
161 AHZ 0.533333 0.839506
162 FB0 0.532787 0.784091
163 IOT 0.53211 0.831325
164 A3D 0.530973 0.918919
165 MTA 0.530864 0.773333
166 3AM 0.53012 0.902778
167 ARG AMP 0.528846 0.829268
168 AR6 AR6 0.528846 0.944444
169 A2P 0.528736 0.929577
170 YLA 0.527273 0.841463
171 6AD 0.526882 0.884615
172 PPS 0.526882 0.85
173 BTX 0.526786 0.819277
174 NAE 0.525862 0.894737
175 BT5 0.522124 0.831325
176 A5A 0.521277 0.807229
177 TSB 0.520833 0.819277
178 6RE 0.517647 0.7375
179 P1H 0.516393 0.851852
180 3AT 0.516129 0.944444
181 SSA 0.515789 0.8
182 7MD 0.514286 0.886076
183 54H 0.510417 0.788235
184 52H 0.510417 0.77907
185 VMS 0.510417 0.788235
186 NSS 0.510204 0.8
187 NAQ 0.508475 0.871795
188 ZAS 0.505882 0.766234
189 IMO 0.505747 0.902778
190 J7C 0.505747 0.746835
191 A3N 0.505747 0.786667
192 AV2 0.505263 0.891892
193 R5I 0.505263 0.918919
194 R7I 0.505263 0.918919
195 53H 0.505155 0.77907
196 5CA 0.505155 0.8
197 8X1 0.505155 0.752809
198 ARU 0.50505 0.8375
199 NVA LMS 0.50505 0.752809
200 9K8 0.504951 0.733333
201 AF3 ADP 3PG 0.504587 0.860759
202 YLY 0.504274 0.831325
203 ZID 0.504202 0.918919
204 S4M 0.5 0.666667
205 V3L 0.5 0.971831
206 FDA 0.5 0.811765
207 LEU LMS 0.5 0.752809
208 DTP 0.5 0.88
209 LPA AMP 0.5 0.839506
210 2AM 0.5 0.916667
211 FNK 0.496183 0.784091
212 6FA 0.496063 0.841463
213 DZD 0.495652 0.884615
214 P5A 0.49505 0.744444
215 DSZ 0.494949 0.821429
216 LSS 0.494949 0.761364
217 MAO 0.494382 0.759036
218 DSH 0.494253 0.725
219 M24 0.491525 0.873418
220 NJP 0.491228 0.92
221 5X8 0.48913 0.786667
222 DAT 0.48913 0.88
223 SFD 0.488372 0.734043
224 FAS 0.488372 0.851852
225 FAD 0.488372 0.851852
226 NAJ PZO 0.487179 0.848101
227 0WD 0.486957 0.896104
228 NPW 0.486726 0.8625
229 7MC 0.486486 0.864198
230 7DT 0.483871 0.957747
231 7DD 0.483516 0.957747
232 GJV 0.483146 0.728395
233 OVE 0.482759 0.88
234 5AD 0.480519 0.746479
235 GSU 0.480392 0.8
236 KAA 0.480392 0.752809
237 NDE 0.48 0.906667
238 N0B 0.479339 0.841463
239 A5D 0.478723 0.786667
240 ODP 0.478261 0.884615
241 RGT 0.47619 0.958904
242 XNP 0.474138 0.85
243 4TA 0.474138 0.807229
244 AMP NAD 0.474138 0.931507
245 62F 0.473684 0.8625
246 NDP 0.473684 0.896104
247 SFG 0.473118 0.773333
248 NDC 0.472441 0.871795
249 YSA 0.471698 0.77907
250 NAJ PYZ 0.471074 0.807229
251 ENP 0.470588 0.918919
252 FAY 0.470149 0.8625
253 TXP 0.469565 0.896104
254 NZQ 0.469565 0.884615
255 DDS 0.46875 0.853333
256 A7D 0.467391 0.776316
257 RFL 0.466667 0.821429
258 ENQ 0.466019 0.943662
259 AAT 0.463918 0.707317
260 SA8 0.463158 0.728395
261 7C5 0.462963 0.818182
262 MHZ 0.462366 0.697674
263 8PZ 0.462264 0.8
264 71V 0.461538 0.883117
265 G A A A 0.461538 0.848101
266 F2N 0.460993 0.793103
267 NEC 0.460674 0.746667
268 A3G 0.460674 0.8
269 GGZ 0.46 0.825
270 6C6 0.458333 0.857143
271 SAH 0.458333 0.766234
272 SAI 0.458333 0.75641
273 P5F 0.457143 0.823529
274 Y3J 0.45679 0.726027
275 A A A 0.456311 0.905405
276 PO4 PO4 A A A A PO4 0.456311 0.902778
277 7D7 0.455696 0.743243
278 SMM 0.454545 0.705882
279 V1N 0.453704 0.944444
280 6IA 0.453608 0.814815
281 SAM 0.453608 0.710843
282 WSA 0.451327 0.788235
283 U A 0.45 0.883117
284 A G 0.449153 0.858974
285 EEM 0.44898 0.710843
286 PGS 0.446809 0.858974
287 ETB 0.446281 0.811765
288 DCA 0.446281 0.802326
289 U A G G 0.445378 0.858974
290 2SA 0.444444 0.932432
291 D5M 0.444444 0.853333
292 DA 0.444444 0.853333
293 GP3 0.443299 0.896104
294 9JJ 0.442857 0.8625
295 128 0.442478 0.776471
296 4YB 0.441441 0.781609
297 GEK 0.441176 0.759494
298 Z5A 0.44 0.77907
299 30N 0.44 0.734043
300 S7M 0.44 0.710843
301 AAM 0.43956 0.943662
302 0T1 0.439024 0.802326
303 COA 0.439024 0.802326
304 12D 0.4375 0.785714
305 FA9 0.4375 0.841463
306 C2R 0.436782 0.90411
307 AMZ 0.436782 0.890411
308 A3S 0.43617 0.810811
309 N6P 0.432692 0.888889
310 PUA 0.430894 0.860759
311 COS 0.428571 0.784091
312 TAP 0.428571 0.883117
313 AMX 0.428571 0.811765
314 1DG 0.428571 0.896104
315 CAO 0.428571 0.775281
316 AIR 0.428571 0.875
317 A6D 0.428571 0.722892
318 DG1 0.428571 0.896104
319 6K6 0.427184 0.90411
320 A3T 0.427083 0.821918
321 NIA 0.426966 0.8
322 649 0.426087 0.744444
323 GTP 0.425743 0.894737
324 SCO 0.425197 0.823529
325 CMX 0.425197 0.823529
326 G2R 0.424528 0.860759
327 GDP 0.424242 0.894737
328 7RA 0.423913 0.930556
329 OXK 0.423077 0.804598
330 0UM 0.423077 0.719512
331 8Q2 0.422414 0.772727
332 FCX 0.421875 0.795455
333 FAM 0.421875 0.784091
334 ACO 0.421875 0.775281
335 GCP 0.421569 0.871795
336 NAP 0.420635 0.918919
337 SXZ 0.420561 0.731707
338 GNH 0.42 0.883117
339 62X 0.419048 0.686047
340 A U 0.418803 0.87013
341 APU 0.418803 0.87013
342 HAX 0.418605 0.784091
343 NVA 2AD 0.418367 0.759494
344 GDC 0.418182 0.884615
345 GKE 0.418182 0.884615
346 GDD 0.418182 0.884615
347 101 0.417582 0.853333
348 GSP 0.417476 0.85
349 3AD 0.416667 0.805556
350 2MC 0.416667 0.75
351 HDV 0.415842 0.868421
352 FYN 0.415385 0.802326
353 3KK 0.415385 0.784091
354 G2Q 0.415094 0.860759
355 K15 0.415094 0.702381
356 NA0 0.414062 0.906667
357 7L1 0.414062 0.775281
358 IVC 0.413534 0.793103
359 S8M 0.413462 0.759494
360 NHD 0.413223 0.905405
361 7RP 0.413043 0.901408
362 MCD 0.412214 0.804598
363 SOP 0.412214 0.784091
364 CA6 0.412214 0.71134
365 COK 0.412214 0.784091
366 1VU 0.409091 0.775281
367 CO6 0.409091 0.784091
368 NMX 0.409091 0.741935
369 CMC 0.409091 0.804598
370 AS 0.408602 0.810127
371 QQY 0.406593 0.815789
372 ACK 0.406593 0.861111
373 6YU 0.40625 0.734043
374 CAJ 0.406015 0.804598
375 SCD 0.406015 0.823529
376 EO7 0.404255 0.788235
377 8BR 0.404255 0.881579
378 GNP 0.403846 0.871795
379 9GM 0.403846 0.871795
380 APX 0.40367 0.907895
381 KB1 0.40367 0.719512
382 TM1 0.40367 0.77381
383 SLU 0.403226 0.770115
384 BCO 0.402985 0.784091
385 MLC 0.402985 0.804598
386 3HC 0.402985 0.793103
387 1HE 0.402985 0.766667
388 A1S 0.402985 0.784091
389 1CZ 0.402878 0.795455
390 CC5 0.402439 0.816901
391 NMN AMP PO4 0.401639 0.87013
392 FAQ 0.40146 0.784091
393 COO 0.4 0.784091
394 YE1 0.4 0.793103
395 MCA 0.4 0.795455
396 CAA 0.4 0.793103
397 2BA 0.4 0.915493
398 CMP 0.4 0.901408
Ligand no: 2; Ligand: NDP; Similar ligands found: 172
No: Ligand ECFP6 Tc MDL keys Tc
1 NDP 1 1
2 0WD 0.827273 1
3 NAI 0.803738 0.986842
4 NMN AMP PO4 0.794643 0.948052
5 NPW 0.692308 0.962025
6 NZQ 0.686441 0.987013
7 1DG 0.68 1
8 DG1 0.68 1
9 A2R 0.650943 0.909091
10 A22 0.64486 0.934211
11 TXP 0.644628 0.924051
12 ATR 0.640777 0.894737
13 NA7 0.636364 0.886076
14 XNP 0.620968 0.949367
15 AP0 0.598361 0.948718
16 A2P 0.598039 0.881579
17 NJP 0.574803 0.923077
18 25L 0.550847 0.934211
19 ODP 0.550388 0.936709
20 NAX 0.544 0.949367
21 25A 0.53913 0.921053
22 80F 0.537879 0.914634
23 2AM 0.529412 0.87013
24 6V0 0.519685 0.974026
25 NAP 0.514493 0.922078
26 7L1 0.507143 0.763441
27 EAD 0.507143 0.949367
28 A2D 0.504673 0.921053
29 TXE 0.503876 0.935897
30 NA0 0.496454 0.910256
31 TXD 0.496124 0.911392
32 SAP 0.495575 0.875
33 AGS 0.495575 0.875
34 P1H 0.493056 0.925926
35 CO7 0.489796 0.791209
36 TAP 0.489362 0.864198
37 PAP 0.482456 0.907895
38 BA3 0.481818 0.921053
39 NAJ PZO 0.478261 0.924051
40 ATP 0.477876 0.921053
41 HEJ 0.477876 0.921053
42 B4P 0.477477 0.921053
43 AP5 0.477477 0.921053
44 ADP 0.477477 0.921053
45 OAD 0.47541 0.897436
46 AR6 0.473684 0.896104
47 AQP 0.473684 0.921053
48 5FA 0.473684 0.921053
49 APR 0.473684 0.896104
50 AN2 0.473214 0.909091
51 3OD 0.467742 0.897436
52 50T 0.464912 0.884615
53 NAJ PYZ 0.464789 0.879518
54 9X8 0.463415 0.851852
55 PO4 PO4 A A A A PO4 0.463415 0.857143
56 V3L 0.461538 0.896104
57 2A5 0.46087 0.85
58 AT4 0.460177 0.886076
59 A1R 0.459016 0.841463
60 4AD 0.459016 0.875
61 ADQ 0.459016 0.897436
62 OVE 0.458716 0.8375
63 OMR 0.458647 0.813953
64 PPS 0.457627 0.811765
65 AD9 0.456897 0.897436
66 CA0 0.45614 0.897436
67 M33 0.45614 0.884615
68 ADJ 0.455882 0.879518
69 A3P 0.455357 0.894737
70 ACP 0.452174 0.897436
71 ENP 0.451613 0.85
72 UP5 0.451128 0.948052
73 SRP 0.45 0.8625
74 ANP 0.449153 0.897436
75 ACQ 0.449153 0.897436
76 PRX 0.448276 0.82716
77 A3R 0.447154 0.841463
78 5AL 0.445378 0.884615
79 7D4 0.443478 0.8375
80 ADX 0.443478 0.811765
81 6YZ 0.438017 0.897436
82 A 0.436364 0.894737
83 AMP 0.436364 0.894737
84 4TC 0.433824 0.924051
85 7D3 0.433628 0.8375
86 DCA 0.433566 0.788889
87 ETB 0.433566 0.797753
88 BIS 0.433071 0.864198
89 1ZZ 0.433071 0.802326
90 00A 0.432 0.864198
91 ATF 0.429752 0.886076
92 DQV 0.428571 0.934211
93 0T1 0.427586 0.788889
94 5SV 0.427419 0.788235
95 8QN 0.427419 0.884615
96 3AM 0.427273 0.857143
97 N01 0.426573 0.884615
98 PR8 0.425197 0.811765
99 LAD 0.425197 0.821429
100 WAQ 0.425197 0.841463
101 DTP 0.425 0.8375
102 AMO 0.424 0.886076
103 PAJ 0.424 0.843373
104 APC 0.423729 0.886076
105 UPA 0.423358 0.935897
106 48N 0.422222 0.853659
107 FYA 0.421875 0.860759
108 PTJ 0.421875 0.853659
109 CNA 0.421429 0.910256
110 PUA 0.42069 0.9125
111 DND 0.419118 0.910256
112 NXX 0.419118 0.910256
113 AV2 0.418033 0.848101
114 COA 0.417808 0.788889
115 3UK 0.417323 0.897436
116 OOB 0.416 0.909091
117 IVC 0.415584 0.78022
118 DAT 0.415254 0.8375
119 NDO 0.414966 0.897436
120 139 0.414286 0.901235
121 B5V 0.414062 0.886076
122 T99 0.413223 0.886076
123 TAT 0.413223 0.886076
124 3AT 0.413223 0.896104
125 YLB 0.413043 0.784091
126 62F 0.4125 0.823529
127 ABM 0.412281 0.848101
128 B5M 0.412214 0.875
129 YAP 0.412214 0.875
130 YLP 0.411765 0.784091
131 NB8 0.410853 0.853659
132 ME8 0.410853 0.802326
133 SON 0.410256 0.886076
134 DLL 0.409449 0.909091
135 AHX 0.409449 0.853659
136 CAO 0.409396 0.763441
137 30N 0.409396 0.72449
138 AMX 0.409396 0.797753
139 COS 0.409396 0.771739
140 7D5 0.409091 0.8125
141 4UW 0.408759 0.9125
142 F2R 0.408451 0.825581
143 APX 0.407692 0.841463
144 SRA 0.40708 0.85
145 CMX 0.406667 0.788889
146 SCO 0.406667 0.788889
147 TYM 0.405797 0.886076
148 COD 0.405594 0.777778
149 CA6 0.405229 0.70297
150 OXK 0.405229 0.771739
151 AP2 0.405172 0.886076
152 A12 0.405172 0.886076
153 9SN 0.40458 0.853659
154 LAQ 0.404412 0.802326
155 T5A 0.404255 0.914634
156 FAM 0.403974 0.771739
157 ACO 0.403974 0.763441
158 FCX 0.403974 0.763441
159 VO4 ADP 0.403226 0.860759
160 ADP VO4 0.403226 0.860759
161 YLC 0.402878 0.823529
162 1VU 0.402597 0.763441
163 B5Y 0.401515 0.875
164 FA5 0.401515 0.886076
165 HAX 0.401316 0.771739
166 AR6 AR6 0.4 0.871795
167 CAJ 0.4 0.771739
168 AFH 0.4 0.843373
169 APU 0.4 0.923077
170 A U 0.4 0.898734
171 TXA 0.4 0.886076
172 4UU 0.4 0.948052
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1NM5; Ligand: NAP; Similar sites found with APoc: 280
This union binding pocket(no: 1) in the query (biounit: 1nm5.bio1) has 51 residues
No: Leader PDB Ligand Sequence Similarity
1 1GXU 2HP None
2 6FHQ DE5 None
3 5N1Z 8GQ None
4 3ZZQ TRP None
5 3FXU TSU 1.97044
6 5LOG SAH 2.14592
7 1XTP SAI 2.3622
8 3VSE SAH 2.46305
9 3P4X ADP 2.46305
10 3A25 SAM 2.65781
11 4RQU NAD 2.66667
12 4FRZ ADP 2.95567
13 3W6X HZP 3.05677
14 5KOK SAH 3.38542
15 1NJR XYL 3.44828
16 2EJU SAH 3.44828
17 4YMH SAH 3.44828
18 3GGO NAI 3.50318
19 4NTX AMR 3.55556
20 4GK9 MAN BMA MAN MAN MAN 3.58423
21 2IZ1 ATR 3.64583
22 3RFV 15L 3.74532
23 3RFV NAI 3.74532
24 4KRG SAH 3.90625
25 3ICS ADP 3.94089
26 1PIG BGC GLC 3.94089
27 3ICT ADP 3.94089
28 1T9D FAD 3.94089
29 5WKC FAD 3.94089
30 1I9G SAM 3.94089
31 1TE2 PGA 3.94089
32 3U9Z ADP 3.94089
33 1IM8 SAI 3.94089
34 1ORR NAD 3.94089
35 1IY8 NAD 3.94089
36 2B6N ALA PRO THR 3.95683
37 5ZW3 SAH 4
38 3SSO SAH 4.05728
39 5D4V SAH 4.10448
40 2Z48 A2G 4.16667
41 2Z48 NGA 4.16667
42 3GFB NAD 4.28571
43 2YIP YIO 4.34783
44 2PT9 S4M 4.36137
45 1UAY ADN 4.4335
46 3LRE ADP 4.4335
47 3S5W NAP 4.4335
48 1HYH NAD 4.4335
49 2VVG ADP 4.4335
50 2VDV SAM 4.4335
51 1DSS NAD 4.4335
52 5UR0 NAD 4.4335
53 3LST SAH 4.4335
54 5JGL SAM 4.4335
55 4Y85 499 4.4335
56 5N58 93W 4.51128
57 1P1C SAH 4.52261
58 1L3I SAH 4.6875
59 2CDU ADP 4.92611
60 2DPM SAM 4.92611
61 6C4N NAP 4.92611
62 5OCM NAP 4.92611
63 5X62 SAH 4.92611
64 2Q1W NAD 4.92611
65 1G55 SAH 4.95627
66 1EJ0 SAM 5
67 1GUZ NAD 5.16129
68 5GZ6 NDP 5.21472
69 5GZ6 7C3 5.21472
70 4IF4 BEF 5.28846
71 3GPO APR 5.35714
72 1LVL NAD 5.41872
73 3MB5 SAM 5.41872
74 1CDO NAD 5.41872
75 3G89 SAM 5.41872
76 4HXY NDP 5.41872
77 4KIB SAH 5.41872
78 5XVH NAP 5.41872
79 1WY7 SAH 5.41872
80 2HJR APR 5.4878
81 2YVJ NAI 5.50459
82 5FA8 SAM 5.59006
83 6HOY AR6 5.62914
84 6HOY TSN 5.62914
85 1R18 SAH 5.72687
86 4GYS MLI 5.72917
87 1AUA BOG 5.74324
88 4CQM NAP 5.74713
89 6EL3 NAP 5.77428
90 3EGI ADP 5.82524
91 1KYQ NAD 5.91133
92 3VYW SAM 5.91133
93 3ITJ CIT 5.91133
94 4NBU NAI 5.91133
95 5VN0 NAI 5.91133
96 1ZQ9 SAM 5.96491
97 2PWY SAH 6.20155
98 4YAC NAI 6.39731
99 2HNK SAH 6.40394
100 2YX1 SFG 6.40394
101 1EZ4 NAD 6.40394
102 4JK3 NAD 6.40394
103 1BW9 NAD 6.40394
104 1NPD NAD 6.40394
105 1PL6 NAD 6.46067
106 3THR C2F 6.48464
107 4ZGS NAD 6.51042
108 4Y9D NAI 6.55738
109 1W6U NAP 6.62252
110 1W73 NAP 6.62252
111 1W8D NAP 6.62252
112 1NYT NAP 6.64207
113 3T7S SAM 6.71642
114 3GWZ SAH 6.77083
115 4A6D SAM 6.79887
116 3OJO NAD 6.89655
117 2CH5 NDG 6.89655
118 4D3F NAP 6.89655
119 5DNK SAH 6.89655
120 2EG5 SAH 6.89655
121 4TQG NDP 6.89655
122 3EYA FAD 6.89655
123 2G5C NAD 6.89655
124 3V1Y NAD 6.89655
125 3PT9 SAH 6.89655
126 6C4M NAP 6.89655
127 3I53 SAH 6.92771
128 6C4T NA7 7.03125
129 2G7C GLA GAL NAG 7.05882
130 3SIG AR6 7.22022
131 3BRE C2E 7.26257
132 2F6U CIT 7.26496
133 1V6A TRE 7.38916
134 2HK9 ATR 7.38916
135 2PS1 ORO 7.38916
136 3ABI NAD 7.38916
137 2V6G NAP 7.41758
138 1A5Z NAD 7.52351
139 9LDT NAD 7.53012
140 9LDB NAD 7.53012
141 6ECU SAH 7.59494
142 3OZG SSI 7.6
143 5JE8 NAD 7.61589
144 5YEC ATP 7.88177
145 3ZG6 APR 7.88177
146 1T5C ADP 7.88177
147 2AOT SAH 7.88177
148 4J1Q NDP 7.88177
149 3CBG SAH 7.88177
150 1WDK NAD 7.88177
151 2NXE SAM 7.88177
152 1JQ3 AAT 7.88177
153 6FDF SAH 7.88177
154 3H4S ADP 8.14815
155 5BW4 SAM 8.2397
156 3M89 GSP 8.33333
157 4RUS NDG 8.37438
158 4RUS NAG 8.37438
159 4DMG SAM 8.37438
160 4E13 NAD 8.37438
161 1YBH FAD 8.37438
162 1ON3 DXX 8.37438
163 1WP4 NDP 8.37438
164 2JHP SAH 8.37438
165 1ON3 MCA 8.37438
166 1DL5 SAH 8.37438
167 3BXO SAM 8.37438
168 2Q7V FAD 8.37438
169 2EWM NAD 8.37438
170 1ZEM NAD 8.39695
171 4KOA NDP 8.40841
172 2DT5 NAD 8.53081
173 1JG3 ADN 8.86699
174 4L2I FAD 8.86699
175 5LW0 AR6 8.86699
176 1W8S FBP 8.86699
177 5ME4 HP4 8.86699
178 3QV1 NAD 8.86699
179 6CI9 NAP 8.88031
180 1G8K MGD 9.02256
181 4I5I NAD 9.05923
182 2F1K NAP 9.319
183 1PJS NAD 9.35961
184 3L9W GSH 9.35961
185 3JWH SAH 9.35961
186 3L9W AMP 9.35961
187 4N49 SAM 9.35961
188 2BFR ADP 9.375
189 3GEG NAD 9.7166
190 6CEP NAD 9.85222
191 1DJN ADP 9.85222
192 6CEP OXM 9.85222
193 2WPB ZZI 9.85222
194 2YYY NAP 9.91254
195 3MYZ TFX 10
196 4KXQ APR 10
197 1I1N SAH 10.177
198 3VPH OXM 10.3226
199 3VPH NAD 10.3226
200 2Q28 ADP 10.3448
201 3RIY NAD 10.3448
202 3GU3 SAH 10.3448
203 3KCC CMP 10.3448
204 6EQS BV8 10.3448
205 2QQF A1R 10.3896
206 2OD9 A1R NCA 10.3896
207 1F3L SAH 10.5919
208 5TZO 7V7 10.6383
209 1MUU NAD 10.6771
210 3U31 NAD 10.8374
211 1GV0 NAD 10.8374
212 3GRU AMP 10.8374
213 1O6Z NAD 10.8911
214 3DXY SAM 11.0092
215 4RDH AMP 11.1111
216 4RDI ATP 11.1111
217 5KVA SAM 11.1511
218 1M2K APR 11.33
219 3G2O SAM 11.33
220 1X87 NAD 11.33
221 1Y8Q ATP 11.33
222 3DUW SAH 11.33
223 2AG8 NAP 11.4068
224 4D79 ATP 11.5942
225 2HMT NAI 11.8056
226 3FUU ADN 11.8227
227 1XDS SAM 11.8227
228 4B4U NAP 11.8812
229 4UP5 94W 12.1212
230 1F8F NAD 12.1294
231 1LSS NAD 12.1429
232 3EWP APR 12.3153
233 5E72 SAM 12.3153
234 1GUX ASP LEU TYR CYS TYR GLU GLN LEU ASN 12.5
235 4OM8 NAD 12.6214
236 1P77 ATR 12.8079
237 1NVT NAP 12.8079
238 1R27 MGD 12.8079
239 1WVG APR 12.8079
240 5OJ7 AR6 12.9371
241 2NVK NAP 13.3005
242 1RP0 AHZ 13.3803
243 3B1F NAD 13.7931
244 1SC6 NAD 13.8021
245 5A3B APR 14.2857
246 1E3I CXF 14.3617
247 5N5D SAM 14.6018
248 1OMO NAD 14.7783
249 4PIV NDP 14.7783
250 1LDN NAD 14.7783
251 1E5Q NDP 14.7783
252 1PS9 NAP 15.1042
253 3A27 SAM 15.2709
254 1V59 NAD 15.7635
255 2ZWS PLM 15.7635
256 4BUZ NAD 16.2562
257 1YC5 NCA 16.2562
258 4BUZ OCZ 16.2562
259 4BUZ OAD 16.2562
260 5ZZ6 ADP 16.7488
261 1MV8 NAD 16.7488
262 3H5N ATP 16.7488
263 2D24 XYS XYS 16.7488
264 5ZZ6 NAD 16.7488
265 1S7G NAD 17.2414
266 1S7G APR 17.2414
267 2ZIF SAM 17.5084
268 4RF2 NAP 17.6471
269 1EU1 MGD 17.734
270 1O94 ADP 17.8125
271 5E8J SAH 18.1818
272 3H8V ATP 18.2266
273 2VT3 ATP 19.2118
274 1XXR MAN 19.2547
275 6HQD SRT 20.6897
276 5JAX 6J7 20.7407
277 5DUS APR 20.8333
278 4JCA CIT 21.5569
279 6AA8 NAD 21.6749
280 5L95 AMP 23.75
Pocket No.: 2; Query (leader) PDB : 1NM5; Ligand: NAD; Similar sites found with APoc: 388
This union binding pocket(no: 2) in the query (biounit: 1nm5.bio1) has 52 residues
No: Leader PDB Ligand Sequence Similarity
1 1GXU 2HP None
2 5N1Z 8GQ None
3 6FHQ DE5 None
4 3JUC PCA 1.96078
5 3FXU TSU 1.97044
6 5LOG SAH 2.14592
7 1XTP SAI 2.3622
8 2ZFI ADP 2.45902
9 3VSE SAH 2.46305
10 3P4X ADP 2.46305
11 4YCA NDP 2.46305
12 3A25 SAM 2.65781
13 4RQU NAD 2.66667
14 1CER NAD 2.71903
15 2O4C NAD 2.89474
16 4FRZ ADP 2.95567
17 5TC4 NAD 2.95567
18 3W6X HZP 3.05677
19 5Y77 FAD 3.125
20 1EBF NAD 3.125
21 5KOK SAH 3.38542
22 5X68 FAD 3.38542
23 2AWN ADP 3.41207
24 1NJR XYL 3.44828
25 5BSZ THM 3.44828
26 2EJU SAH 3.44828
27 1I36 NAP 3.44828
28 4YMH SAH 3.44828
29 1UXG FUM 3.44828
30 1UXG NAD 3.44828
31 3GGO NAI 3.50318
32 4NTX AMR 3.55556
33 4GK9 MAN BMA MAN MAN MAN 3.58423
34 5H81 NAP 3.59897
35 2IZ1 ATR 3.64583
36 5OJL TXP 3.69128
37 3RFV 15L 3.74532
38 3RFV NAI 3.74532
39 4KRG SAH 3.90625
40 5GSN NAP 3.90625
41 3ICS ADP 3.94089
42 3ICT ADP 3.94089
43 1X7D NAD 3.94089
44 1F9V ADP 3.94089
45 4IQY AR6 3.94089
46 5WKC FAD 3.94089
47 1I9G SAM 3.94089
48 1T9D FAD 3.94089
49 1P31 EPU 3.94089
50 1SOW NAD 3.94089
51 5LD5 NAD 3.94089
52 1TE2 PGA 3.94089
53 5GT9 NAP 3.94089
54 1IM8 SAI 3.94089
55 3U9Z ADP 3.94089
56 2B6N ALA PRO THR 3.95683
57 4MDB RLT 4
58 5ZW3 SAH 4
59 3SSO SAH 4.05728
60 5D4V SAH 4.10448
61 1KJ8 GAR 4.16667
62 5CAE COA 4.16667
63 2Z48 A2G 4.16667
64 2Z48 NGA 4.16667
65 3GD4 NAD 4.16667
66 3GFB NAD 4.28571
67 2YIP YIO 4.34783
68 1DSS NAD 4.4335
69 1UAY ADN 4.4335
70 3S5W NAP 4.4335
71 5UR0 NAD 4.4335
72 1U8X NAD 4.4335
73 3LKF PC 4.4335
74 1HYH NAD 4.4335
75 2VVG ADP 4.4335
76 2VDV SAM 4.4335
77 5VKT NAP 4.4335
78 3LST SAH 4.4335
79 3S5W FAD 4.4335
80 4Y85 499 4.4335
81 5N58 93W 4.51128
82 5NUE NAD 4.51807
83 1P1C SAH 4.52261
84 3H9E NAD 4.62428
85 1L3I SAH 4.6875
86 4L8V NAP 4.74777
87 3A06 NDP 4.78723
88 2XI7 XI7 4.8913
89 2CDU ADP 4.92611
90 6C4N NAP 4.92611
91 4BVA NDP 4.92611
92 4Z0H NAD 4.92611
93 5OCM NAP 4.92611
94 4XB2 NDP 4.92611
95 2DPM SAM 4.92611
96 2Q1W NAD 4.92611
97 5X62 SAH 4.92611
98 2VYN NAD 4.92611
99 1GAD NAD 4.92611
100 1ZH8 NAP 4.92611
101 1G55 SAH 4.95627
102 1VI2 NAD 5
103 1EJ0 SAM 5
104 1PZG A3D 5.13595
105 2Q0L NAP 5.14469
106 1GUZ NAD 5.16129
107 1UP7 NAD 5.20833
108 4IF4 BEF 5.28846
109 3GPO APR 5.35714
110 1LVL NAD 5.41872
111 1CDO NAD 5.41872
112 3MB5 SAM 5.41872
113 5XVH NAP 5.41872
114 5KBF CMP 5.41872
115 3G89 SAM 5.41872
116 1HKU NAD 5.41872
117 4HXY NDP 5.41872
118 4KIB SAH 5.41872
119 4PLG NAI 5.41872
120 4PLG OXM 5.41872
121 2XYQ SAH 5.41872
122 2HJR APR 5.4878
123 2YVJ NAI 5.50459
124 5FA8 SAM 5.59006
125 6HOY AR6 5.62914
126 6HOY TSN 5.62914
127 1R18 SAH 5.72687
128 1AUA BOG 5.74324
129 2RBK VN4 5.74713
130 4CQM NAP 5.74713
131 1Z0A GDP 5.74713
132 5U5G NAP 5.76271
133 6EL3 NAP 5.77428
134 3EGI ADP 5.82524
135 1KYQ NAD 5.91133
136 3WV8 ATP 5.91133
137 3VYW SAM 5.91133
138 3ITJ CIT 5.91133
139 5VN0 NAI 5.91133
140 1O0S NAI 5.91133
141 1B8U NAD 5.91133
142 2BRY FAD 5.91133
143 4TXI FAD 5.91133
144 4JLS 3ZE 5.92105
145 1ZQ9 SAM 5.96491
146 5Y8L NAD 6.1017
147 5Y8L HUI 6.1017
148 1D1T NAD 6.16622
149 2PWY SAH 6.20155
150 2GVC FAD 6.25
151 2GV8 NDP 6.25
152 1VQW FAD 6.25
153 4YAC NAI 6.39731
154 4JK3 NAD 6.40394
155 1BW9 NAD 6.40394
156 1EZ4 NAD 6.40394
157 2HNK SAH 6.40394
158 1C1X NAD 6.40394
159 1BXG NAD 6.40394
160 1NPD NAD 6.40394
161 2YX1 SFG 6.40394
162 2DBZ NAP 6.40394
163 5KKA 6V0 6.41026
164 1PL6 NAD 6.46067
165 1PL6 572 6.46067
166 3THR C2F 6.48464
167 4ZGS NAD 6.51042
168 4Y9D NAI 6.55738
169 1W6U NAP 6.62252
170 1W73 NAP 6.62252
171 1W8D NAP 6.62252
172 1NYT NAP 6.64207
173 4PLT NAI 6.64653
174 4PLT OXM 6.64653
175 5Z20 NAI 6.66667
176 3T7S SAM 6.71642
177 3GWZ SAH 6.77083
178 3OJO NAD 6.89655
179 4D3F NAP 6.89655
180 2A92 NAI 6.89655
181 2G5C NAD 6.89655
182 3V1Y NAD 6.89655
183 6C4M NAP 6.89655
184 5MQ6 NDP 6.89655
185 1J0X NAD 6.89655
186 2EG5 SAH 6.89655
187 5DNK SAH 6.89655
188 4TQG NDP 6.89655
189 5ZBR ANP 6.89655
190 3EYA FAD 6.89655
191 3PT9 SAH 6.89655
192 3I53 SAH 6.92771
193 6C4T NA7 7.03125
194 5A1T NAI 7.03812
195 5A1T OXM 7.03812
196 2DC1 NAD 7.20339
197 3BRE C2E 7.26257
198 2F6U CIT 7.26496
199 1V6A TRE 7.38916
200 2HK9 ATR 7.38916
201 1LTH NAD 7.38916
202 2HK9 NAP 7.38916
203 3ABI NAD 7.38916
204 2V7Y ADP 7.38916
205 1HDG NAD 7.38916
206 3B20 NAD 7.38916
207 2D2I NAP 7.38916
208 2V6G NAP 7.41758
209 1A5Z NAD 7.52351
210 9LDT NAD 7.53012
211 9LDB NAD 7.53012
212 5TUK FAD 7.55208
213 3OZG SSI 7.6
214 5JE8 NAD 7.61589
215 2Y6P CTP 7.69231
216 5DN9 NAD 7.69231
217 2DFV NAD 7.78098
218 6F3M NAD 7.8125
219 5YEC ATP 7.88177
220 3ZG6 APR 7.88177
221 1WDK NAD 7.88177
222 3CBG SAH 7.88177
223 4J1Q NDP 7.88177
224 2AOT SAH 7.88177
225 2NXE SAM 7.88177
226 1JQ3 AAT 7.88177
227 6FDF SAH 7.88177
228 1YQD NAP 7.9235
229 5BW4 SAM 8.2397
230 3M89 GSP 8.33333
231 4RUS NDG 8.37438
232 4RUS NAG 8.37438
233 4E13 NAD 8.37438
234 5AHO TLA 8.37438
235 1WP4 NDP 8.37438
236 4DMG SAM 8.37438
237 2JHP SAH 8.37438
238 2CVZ NDP 8.37438
239 1YBH FAD 8.37438
240 1ON3 DXX 8.37438
241 1DL5 SAH 8.37438
242 1ON3 MCA 8.37438
243 1ZEM NAD 8.39695
244 4KOA NDP 8.40841
245 2DT5 NAD 8.53081
246 2OEM 1AE 8.86699
247 1JG3 ADN 8.86699
248 4L2I FAD 8.86699
249 5LW0 AR6 8.86699
250 3QV1 NAD 8.86699
251 1J5P NAD 8.86699
252 1W8S FBP 8.86699
253 5ME4 HP4 8.86699
254 6CI9 NAP 8.88031
255 1G8K MGD 9.02256
256 4I5I NAD 9.05923
257 2F1K NAP 9.319
258 1PJS NAD 9.35961
259 3L9W GSH 9.35961
260 3CIF NAD 9.35961
261 3L9W AMP 9.35961
262 4GKV NAD 9.35961
263 3CIF G3H 9.35961
264 1VJT NAD 9.35961
265 3JWH SAH 9.35961
266 2BFR ADP 9.375
267 3IHG FAD 9.63542
268 3GEG NAD 9.7166
269 6F5Z SAH 9.83607
270 1DJN ADP 9.85222
271 6CEP NAD 9.85222
272 6CEP OXM 9.85222
273 2WPB ZZI 9.85222
274 3IWJ NAD 9.85222
275 1GQ2 NAP 9.89583
276 2YYY NAP 9.91254
277 5N2I NAP 9.91379
278 3MYZ TFX 10
279 4KXQ APR 10
280 5Z21 NAI 10.0559
281 1I1N SAH 10.177
282 3VPH OXM 10.3226
283 3VPH NAD 10.3226
284 2Q28 ADP 10.3448
285 3RIY NAD 10.3448
286 3GU3 SAH 10.3448
287 3KB6 NAD 10.3448
288 3KCC CMP 10.3448
289 6EQS BV8 10.3448
290 2QQF A1R 10.3896
291 2OD9 A1R NCA 10.3896
292 1V8B NAD 10.4167
293 4CJX NAP 10.4167
294 1F3L SAH 10.5919
295 1MUU NAD 10.6771
296 1GV0 NAD 10.8374
297 3U31 NAD 10.8374
298 3GRU AMP 10.8374
299 4II2 ATP 10.8434
300 1O6Z NAD 10.8911
301 5WP5 SAH 10.998
302 3DXY SAM 11.0092
303 4RDH AMP 11.1111
304 4RDI ATP 11.1111
305 5KVA SAM 11.1511
306 1M2K APR 11.33
307 3G2O SAM 11.33
308 1Y8Q ATP 11.33
309 1X87 NAD 11.33
310 3DUW SAH 11.33
311 2AG8 NAP 11.4068
312 1J49 NAD 11.4114
313 4D79 ATP 11.5942
314 2HMT NAI 11.8056
315 3FUU ADN 11.8227
316 1XDS SAM 11.8227
317 1LUA NAP 11.8467
318 4B4U NAP 11.8812
319 4UP5 94W 12.1212
320 1F8F NAD 12.1294
321 1LSS NAD 12.1429
322 5TUF FAD 12.2396
323 5E72 SAM 12.3153
324 3EWP APR 12.3153
325 1GUX ASP LEU TYR CYS TYR GLU GLN LEU ASN 12.5
326 4OM8 NAD 12.6214
327 3IID APR 12.7962
328 1P77 ATR 12.8079
329 5OFW 9TW 12.8079
330 5N6C NAD 12.8079
331 1NVT NAP 12.8079
332 1R27 MGD 12.8079
333 2B4R AES 12.8079
334 2B4R NAD 12.8079
335 5N53 8NB 12.8205
336 5OJ7 AR6 12.9371
337 4UP3 NDP 13.3758
338 1RP0 AHZ 13.3803
339 3B1F NAD 13.7931
340 1SC6 NAD 13.8021
341 2DKH FAD 14.0625
342 4E5N NAD 14.2424
343 5A3B APR 14.2857
344 3BAZ NAP 14.2857
345 2XWL CTP 14.2857
346 1E3I CXF 14.3617
347 5N5D SAM 14.6018
348 1OMO NAD 14.7783
349 1LDN NAD 14.7783
350 4PIV NDP 14.7783
351 1PS9 NAP 15.1042
352 3A27 SAM 15.2709
353 6BII NAP 15.3153
354 1V59 NAD 15.7635
355 2ZWS PLM 15.7635
356 1OBB NAD 15.7635
357 4BUZ NAD 16.2562
358 1YC5 NCA 16.2562
359 4BUZ OCZ 16.2562
360 4BUZ OAD 16.2562
361 5ZZ6 ADP 16.7488
362 1MV8 NAD 16.7488
363 5ZZ6 NAD 16.7488
364 3H5N ATP 16.7488
365 2D24 XYS XYS 16.7488
366 1S7G NAD 17.2414
367 1S7G APR 17.2414
368 2ZIF SAM 17.5084
369 4RF2 NAP 17.6471
370 1O94 ADP 17.8125
371 5E8J SAH 18.1818
372 3H8V ATP 18.2266
373 1RJW ETF 18.8791
374 2VT3 ATP 19.2118
375 2FKA BEF 20.155
376 5FIT AP2 20.4082
377 6HQD SRT 20.6897
378 5DUS APR 20.8333
379 4JCA CIT 21.5569
380 6AA8 NAD 21.6749
381 5L95 AMP 23.75
382 3NJ4 NAD 27.6042
383 3NJ4 AFX 27.6042
384 5OVK NDP 29.064
385 5MDH NAD 32.5123
386 2VHW NAI 38.7268
387 2Y65 ADP 45
388 1SAY PYR 49.0305
Pocket No.: 3; Query (leader) PDB : 1NM5; Ligand: NAD; Similar sites found with APoc: 567
This union binding pocket(no: 3) in the query (biounit: 1nm5.bio1) has 31 residues
No: Leader PDB Ligand Sequence Similarity
1 4C3Y FAD 2.34375
2 3GDN FAD 2.34375
3 3GDN HBX 2.34375
4 4C3Y ANB 2.34375
5 3WGT FAD 2.46305
6 3WGT QSC 2.46305
7 1TDF FAD 2.46305
8 1TDF NAP 2.46305
9 5ZI2 ADP 2.46305
10 5ZI2 NAD 2.46305
11 3LU1 NAD 2.47253
12 4RPL FAD 2.50627
13 4RPL 3UC 2.50627
14 5ZYN FAD 2.54777
15 4DSG UDP 2.60417
16 4DSG FAD 2.60417
17 2NCD ADP 2.60417
18 1T26 NAI 2.79503
19 1T26 GBD 2.79503
20 1R6N 434 2.8436
21 1PN0 FAD 2.86458
22 1PN0 IPH 2.86458
23 4OOE FOM 2.86458
24 4OOE NDP 2.86458
25 4JNA FAD 2.95567
26 5YU3 PRO 2.95567
27 5YU3 NAD 2.95567
28 2RGJ FAD 2.95567
29 1KEW NAD 2.95567
30 3CGB FAD 2.95567
31 2YY7 NAD 2.95567
32 1KEW TYD 2.95567
33 4W6Z 8ID 2.95567
34 5X9D 80F 2.96053
35 5JY6 NAD 3.08989
36 1REO FAD 3.125
37 1E1M FAD 3.125
38 1E1M NAP 3.125
39 4MP8 NAD 3.24484
40 4MP8 MLI 3.24484
41 5Z2L NDP 3.26531
42 1D4D FAD 3.32168
43 1ZK7 FAD 3.38542
44 5BRT CH9 3.44828
45 2JHF NAD