Receptor
PDB id Resolution Class Description Source Keywords
1UAD 2.1 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE RALA-GPPNHP-SEC5 RAL-BINDING DOMAIN COMPLEX HOMO SAPIENS SMALL GTP-BINDING PROTEIN IMMUNOGLOBLIN-LIKE FOLD BETA- SANDWICH ENDOCYTOSIS/EXOCYTOSIS COMPLEX
Ref.: STRUCTURAL BASIS OF THE INTERACTION BETWEEN RALA AND SEC5, A SUBUNIT OF THE SEC6/8 COMPLEX EMBO J. V. 22 3267 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:200;
B:1200;
Valid;
Valid;
none;
none;
Ka = 7260000 M^-1
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:300;
B:300;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1UAD 2.1 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE RALA-GPPNHP-SEC5 RAL-BINDING DOMAIN COMPLEX HOMO SAPIENS SMALL GTP-BINDING PROTEIN IMMUNOGLOBLIN-LIKE FOLD BETA- SANDWICH ENDOCYTOSIS/EXOCYTOSIS COMPLEX
Ref.: STRUCTURAL BASIS OF THE INTERACTION BETWEEN RALA AND SEC5, A SUBUNIT OF THE SEC6/8 COMPLEX EMBO J. V. 22 3267 2003
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 1UAD Ka = 7260000 M^-1 GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 1UAD Ka = 7260000 M^-1 GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 1UAD Ka = 7260000 M^-1 GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1UAD; Ligand: GNP; Similar sites found: 388
This union binding pocket(no: 1) in the query (biounit: 1uad.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2W58 ADP 0.0000006191 0.6764 None
2 1WY7 SAH 0.001742 0.42794 2.85714
3 1TQ4 GDP 0.00000003983 0.6323 3.0303
4 5BQ5 ADP BEF 0.0001054 0.50554 3.0303
5 4U00 ADP 0.000006938 0.61441 3.42857
6 4CVN ADP 0.000015 0.57619 3.42857
7 2GDJ ANP 0.0001437 0.51138 3.42857
8 1L2T ATP 0.001032 0.43036 3.42857
9 2VVG ADP 0.0000002799 0.41679 3.42857
10 4R2I ANP 0.002473 0.46091 4
11 4RD0 GDP 0.00000000005203 0.74688 4.0404
12 1D2E GDP 0.00000001588 0.67593 4.0404
13 2QZ4 ADP 0.00007642 0.51213 4.0404
14 1D2N ANP 0.0008913 0.44419 4.0404
15 1VBO MAN MAN MAN 0.008033 0.43634 4.0404
16 1QAN SAH 0.001003 0.43441 4.0404
17 1VBO MAN 0.01262 0.42681 4.0404
18 3FB4 AP5 0.005085 0.41578 4.0404
19 1OBV FMN 0.006088 0.40806 4.14201
20 3A1S GDP 0.0000000796 0.66218 4.57143
21 1F5N GNP 0.000009299 0.50043 4.57143
22 2QEN ADP 0.0001624 0.42501 4.57143
23 3FWY ADP 0.000005618 0.5518 5.05051
24 2B8W ALF 5GP 0.00000884 0.51464 5.05051
25 4R43 GDP 0.0003325 0.49338 5.05051
26 2JLR ANP 0.0002832 0.48004 5.05051
27 4QOS ADP 0.0008558 0.46268 5.05051
28 2PEZ DAT 0.001108 0.435 5.05051
29 2Y65 ADP 0.000004802 0.40268 5.05051
30 1Z6T ADP 0.0002819 0.47513 5.14286
31 1NY5 ADP 0.0009941 0.45044 5.14286
32 4PU6 ASP 0.0206 0.41284 5.34351
33 3PQC GDP 0.00000003513 0.66941 5.71429
34 1T5C ADP 0.00000352 0.62912 5.71429
35 1G3Q ADP 0.00002635 0.54065 5.71429
36 1ION ADP 0.00005072 0.52052 5.71429
37 4IEE AGS 0.001006 0.47522 5.71429
38 2CE7 ADP 0.0001513 0.40921 5.71429
39 3DC4 ADP 0.000001119 0.63479 6.06061
40 5I34 GDP 0.00006614 0.52137 6.06061
41 2PL3 ADP 0.000452 0.49283 6.06061
42 2BEK ATP 0.0001274 0.47609 6.06061
43 5A7Y SAH 0.007208 0.43184 6.06061
44 4MKG AP5 0.002953 0.42579 6.06061
45 4IOK XPO 0.001377 0.42525 6.06061
46 4IOK ADP 0.001646 0.40845 6.06061
47 1I9G SAM 0.007712 0.4005 6.06061
48 1PUJ GNP 0.000000001728 0.58612 6.28571
49 5N69 ADP 0.00002667 0.52733 6.28571
50 4HSE ADP 0.00005169 0.52653 6.28571
51 3VX3 ADP 0.0001271 0.48563 6.28571
52 2F5X ASP 0.03026 0.40514 6.73077
53 1SVI GDP 0.0000000003972 0.79959 6.85714
54 1V8K ANP 0.000000225 0.64997 6.85714
55 2WHX ADP 0.00002124 0.57546 6.85714
56 4P4T GDP 0.000001589 0.56964 6.85714
57 1FP6 ADP 0.00001428 0.53983 6.85714
58 4WZA ADP 0.00003621 0.52698 6.85714
59 4WZA ACP 0.00003621 0.52698 6.85714
60 5H56 ADP 0.003368 0.41237 6.85714
61 5H56 TYD 0.003368 0.41237 6.85714
62 5AHO TLA 0.01589 0.40582 6.85714
63 4B47 GDP 0.0000000002744 0.80772 7.07071
64 1KK1 GNP 0.000000003948 0.74907 7.07071
65 3NHB ADP 0.00002151 0.57524 7.07071
66 4PX9 ADP 0.0001857 0.5124 7.07071
67 1R6B ADP 0.0001303 0.50716 7.07071
68 1G41 ADP 0.0001068 0.50528 7.07071
69 4TTQ ATP 0.0003627 0.49151 7.07071
70 3B7G ANP 0.001126 0.46198 7.07071
71 1M7G ADX 0.001052 0.4345 7.07071
72 2J5V PCA 0.02515 0.42746 7.07071
73 1M7G ADP 0.001497 0.42527 7.07071
74 1M7G AV2 0.00001565 0.41909 7.07071
75 4MKF AP5 0.004565 0.41881 7.07071
76 3COB ADP 0.0000008792 0.41881 7.07071
77 1QHG ATP 0.006925 0.416 7.07071
78 1O8B ABF 0.02166 0.40748 7.07071
79 5XQL C2E 0.0427 0.40735 7.07071
80 2DT9 THR 0.02778 0.40193 7.07071
81 3QF7 ANP 0.0009794 0.40166 7.07071
82 1LOB MMA 0.02942 0.40065 7.07071
83 1SVK ALF GDP 0.0000000008919 0.68098 7.42857
84 1BH2 GSP 0.0000000009174 0.63385 7.42857
85 1TAD GDP 0.000000001958 0.62208 7.42857
86 1TAD ALF 0.000000001958 0.62208 7.42857
87 2OM2 GDP 0.0000008237 0.57541 7.42857
88 5TSH ADP 0.00009832 0.53849 7.42857
89 5TSH ANP 0.00007812 0.52445 7.42857
90 4ZNL BEF ADP 0.0004333 0.48199 7.42857
91 3DZD ADP 0.0007074 0.46172 7.42857
92 5HR5 ADP 0.000649 0.45879 7.42857
93 1OYY AGS 0.004039 0.43976 7.42857
94 4FCW ADP 0.0002823 0.40076 7.42857
95 2QN6 GDP 0.0000000006247 0.78963 7.52688
96 4LJ9 ACP 0.0009164 0.47162 8
97 1P4V GLY 0.01986 0.4143 8
98 1BG2 ADP 0.000001119 0.40344 8
99 5CK5 GDP 0.000000002136 0.76259 8.08081
100 2C78 GNP 0.0000000001575 0.7265 8.08081
101 1NRJ GTP 0.000000002722 0.6827 8.08081
102 2C77 GNP 0.0000000001552 0.65765 8.08081
103 4NON GDP 0.0000001643 0.55776 8.08081
104 1JI0 ATP 0.00004927 0.54934 8.08081
105 2IS6 ADP 0.0001186 0.5155 8.08081
106 3VM7 GLC 0.0103 0.43919 8.08081
107 4PJ3 ANP 0.00335 0.43057 8.08081
108 2BIF SIN 0.003005 0.4286 8.08081
109 2BIF ANP 0.001707 0.4286 8.08081
110 1FNZ A2G 0.02145 0.41104 8.08081
111 3T12 GDP ALF 0.000000001257 0.68826 8.57143
112 2AWN ADP 0.0000007423 0.67762 8.57143
113 1CS4 GSP 0.0000000005218 0.65414 8.57143
114 1AZT GSP 0.0000000003073 0.65077 8.57143
115 3T1O GDP 0.00000007419 0.52744 8.57143
116 5I0H ADP BEF 0.0000009819 0.51983 8.57143
117 3ZQ6 ADP ALF 0.00001451 0.49292 8.57143
118 1XMV ADP 0.0002972 0.48989 8.57143
119 1U0J ADP 0.0009005 0.47767 8.57143
120 2WZF BGC 0.009588 0.43231 8.57143
121 1GXU 2HP 0.0006079 0.46881 8.79121
122 4M9Q GNP 0.00000000006889 0.74172 9.09091
123 1JWY GDP 0.0000003835 0.61222 9.09091
124 2NCD ADP 0.000006277 0.60283 9.09091
125 4AG5 ADP 0.00001947 0.57685 9.09091
126 1JWY ADP 0.00001619 0.55084 9.09091
127 4WOP CTP 0.00004938 0.49854 9.09091
128 2VB6 ADP BEF 0.00004513 0.49039 9.09091
129 1P9B GDP 0.0003484 0.47098 9.09091
130 4PFO ADP 0.0001819 0.45712 9.09091
131 1VHT BA3 0.001303 0.45407 9.09091
132 3RLF ANP 0.0004815 0.44765 9.09091
133 2X7I CIT 0.004224 0.4388 9.09091
134 1P9B HDA 0.01225 0.42704 9.09091
135 4GOX A3P 0.001976 0.42216 9.09091
136 4P32 ADP 0.0036 0.41456 9.09091
137 2Z49 AMG 0.01881 0.4028 9.09091
138 2WE0 UMP 0.02425 0.40108 9.09091
139 3MD0 GDP 0.000000001851 0.76574 9.14286
140 3TK1 GDP 0.000000001266 0.78796 9.71429
141 3QKT ANP 0.001111 0.42904 9.71429
142 3R7F CP 0.01214 0.42733 9.71429
143 1YRB GDP 0.0000000002942 0.75576 10.101
144 2IYL GDP 0.00001208 0.5645 10.101
145 3E70 GDP 0.00001514 0.55225 10.101
146 4BQS ADP 0.00008884 0.52169 10.101
147 1XP8 AGS 0.0004129 0.49483 10.101
148 3DKP ADP 0.0005053 0.48439 10.101
149 1G6O ADP 0.0003108 0.48342 10.101
150 3KJI ADP 0.00004507 0.44369 10.101
151 1LVG ADP 0.000003309 0.42601 10.101
152 4OI4 ATP 0.002057 0.42143 10.101
153 3H4S ADP 0.000001586 0.41317 10.101
154 4FRZ ADP 0.000005201 0.41274 10.101
155 4HI0 GDP 0.000000533 0.58359 10.2857
156 3ZFD ANP 0.0000000563 0.52693 10.2857
157 2FAH GDP 0.0001555 0.49205 10.2857
158 3BFX A3P 0.003423 0.42246 10.2857
159 2Q2Y ADP 0.0007037 0.45219 10.8571
160 2Q2Y MKR 0.0007512 0.4498 10.8571
161 5KSZ GCP 0.00000007309 0.65442 11.1111
162 1IN4 ADP 0.0003173 0.46809 11.1111
163 3BER AMP 0.01096 0.41826 11.1111
164 2GMP NAG MAN 0.02444 0.41432 11.1111
165 1F2U ATP 0.00195 0.4101 11.4094
166 2BVN GNP 0.0000000001942 0.76407 11.4286
167 2HCJ GDP 0.0000000002306 0.5562 11.4286
168 1D8T GDP 0.0000000007589 0.55602 11.4286
169 2GK6 ADP 0.00211 0.46449 11.4286
170 4U60 SIA GAL NGA 0.008669 0.42355 11.4286
171 4U60 SIA 0.02232 0.41753 11.4286
172 4U60 SIA GAL BGC NGA GAL 0.02055 0.40865 11.4286
173 2Z5F A3P 0.008724 0.40128 11.4286
174 3WXM GTP 0.0000000002588 0.69107 12
175 2HF9 GSP 0.00000004769 0.64518 12
176 2D2F ADP 0.0001591 0.53119 12
177 2WJG GDP 0.00000001754 0.70471 12.1212
178 2WJH GDP 0.00000002391 0.53649 12.1212
179 5L3W GDP 0.00003224 0.5298 12.1212
180 2WJH FLC 0.000002239 0.47681 12.1212
181 1OS1 ATP 0.001751 0.40261 12.1212
182 2KIN ADP 0.000001458 0.40172 12.1212
183 1QHH ATP 0.0172 0.4047 12.426
184 1SKQ GDP 0.000000007472 0.73504 12.5714
185 5GJC ATP 0.00007754 0.52461 12.5714
186 3BOS CDP 0.0002149 0.50275 12.5714
187 1GOJ ADP 0.0000002945 0.68987 13.1313
188 5L3V GDP 0.000007646 0.55925 13.1313
189 4YMU ATP 0.0000626 0.53632 13.1313
190 3UIE ANP 0.00009519 0.50764 13.1313
191 5L3S GNP 0.00001714 0.50291 13.1313
192 1XKV ATP 0.000414 0.47755 13.1313
193 1CR1 TTP 0.0009217 0.40865 13.1313
194 3AB4 THR 0.0234 0.40185 13.1313
195 4H1V GNP 0.000001037 0.58488 13.1429
196 1FQK ALF 0.0000002271 0.68618 13.6054
197 1FQJ ALF 0.0000003673 0.66716 13.6054
198 1FQJ GDP 0.00000005079 0.61294 13.6054
199 1FQK GDP 0.00000008669 0.60329 13.6054
200 1SQ5 ADP 0.00005317 0.52594 13.7143
201 1G8S MET 0.006654 0.43934 13.7143
202 3QOX SAH 0.002695 0.40666 13.7143
203 5KSP GDP 0.00000003047 0.68229 14.1414
204 1YQT ADP 0.00003871 0.56181 14.1414
205 1W7J ADP BEF 0.000009857 0.54079 14.1414
206 2OG2 MLI 0.00009091 0.54017 14.1414
207 3BFV ADP 0.00005469 0.5321 14.1414
208 3B9Q MLI 0.0001605 0.52896 14.1414
209 4QM7 GTP 0.0001097 0.51717 14.1414
210 2C9O ADP 0.0002518 0.46794 14.1414
211 1YTM ATP 0.0003156 0.4637 14.1414
212 1B0U ATP 0.001039 0.45402 14.1414
213 1OFH ADP 0.0001385 0.41362 14.1414
214 1F9V ADP 0.000006177 0.41262 14.1414
215 1APZ ASP 0.02725 0.40644 14.1414
216 5LB3 ADP 0.0002248 0.5082 14.2857
217 2IXE ATP 0.0005487 0.44922 14.2857
218 1W5T ADP 0.001165 0.44733 14.2857
219 1W5T ANP 0.0009352 0.44329 14.2857
220 4DCT GDP 0.0000000005409 0.76673 14.8571
221 1G7S GDP 0.000000004804 0.72099 14.8571
222 2VF7 ADP 0.0005556 0.47678 14.8571
223 1G7C 5GP 0.00000074 0.62442 14.8936
224 1GOT GDP 0.0000003695 0.58365 15.0685
225 3B5J 12D 0.00003682 0.55592 15.1515
226 2DPY ADP 0.0002554 0.51219 15.1515
227 5X40 ACP 0.0008472 0.42024 15.1515
228 2GWH A3P 0.007104 0.41187 15.1515
229 4LPS GDP 0.00000007758 0.66272 15.4286
230 1JJ7 ADP 0.000003111 0.63726 15.4286
231 4LC1 GDP 0.000000008551 0.72013 16
232 3CX8 GSP 0.0000000003034 0.65093 16
233 3W5J GDP 0.000003243 0.61644 16
234 4ZG4 VO4 ADP 0.000002128 0.54552 16.1616
235 1IHU AF3 0.00003697 0.49887 16.1616
236 1IHU ADP 0.00004776 0.48937 16.1616
237 1FNN ADP 0.0002876 0.46998 16.1616
238 4YS0 ADP 0.001256 0.44586 16.1616
239 1V6A TRE 0.01799 0.41666 16.1616
240 2GJ8 ALF GDP 0.0000000008564 0.65648 16.2791
241 4NCN GTP 0.00000000001673 0.75767 16.5714
242 1DAR GDP 0.00000003052 0.69283 16.5714
243 4WZ6 ATP 0.00001562 0.58294 16.5714
244 2CHG ANP 0.0002383 0.47841 16.5714
245 1NJF AGS 0.0001252 0.4472 16.5714
246 1NJF ADP 0.0001003 0.43821 16.5714
247 4BAS GNP 0.000000003958 0.61739 17.1429
248 3AB3 GDP 0.00000002971 0.57875 17.1429
249 2ODE ALF GDP 0.0000000007216 0.63813 17.7143
250 5FG3 GDP 0.0000000001454 0.56298 17.7143
251 2RCN GDP 0.00000000006104 0.82617 18.1818
252 4XTR ADP 0.00003032 0.51311 18.1818
253 3ZS9 ADP ALF 0.00001174 0.49664 18.1818
254 4XTR ATP 0.00003538 0.49478 18.1818
255 4XVU ATP 0.00003742 0.49377 18.1818
256 2WOJ ADP ALF 0.00001642 0.4911 18.1818
257 4QAG F95 0.01992 0.41853 18.1818
258 3P4X ADP 0.0001 0.40186 18.1818
259 2XTZ GSP 0.0000000001196 0.70448 18.2857
260 3A4M ADP 0.00001001 0.58532 18.2857
261 1GP2 GDP 0.0000009047 0.56096 18.3099
262 2ZR9 DTP 0.000304 0.4953 18.8571
263 1G6H ADP 0.000003797 0.63034 19.1919
264 2OFW ADX 0.001291 0.43987 19.1919
265 1X6V ADP 0.001207 0.4074 19.1919
266 3IIJ ADP 0.00001673 0.55751 19.4286
267 2V7Q ADP 0.00006566 0.52818 19.4286
268 3ZIA ATP 0.0001006 0.51258 19.4286
269 2V7Q ATP 0.0001735 0.49536 19.4286
270 3ZIA ADP 0.0002125 0.48579 19.4286
271 2CK3 ANP 0.0003867 0.4643 19.4286
272 2CK3 ADP 0.0006049 0.44354 19.4286
273 3H86 AP5 0.0009894 0.43975 19.4286
274 1W0J ADP BEF 0.0004013 0.41702 19.4286
275 1W0J ADP 0.0002272 0.41521 19.4286
276 4R98 GNH 0.000001563 0.60837 19.5572
277 1KK8 BEF ADP 0.00001293 0.53547 20
278 1B7T ADP 0.00004882 0.5213 20
279 2WIC GNP 0.00000003889 0.67718 20.5993
280 5HCN GCP 0.000000001276 0.74876 21.1429
281 3RC3 ANP 0.0134 0.41812 21.2121
282 1H65 GDP 0.000002859 0.54599 21.7143
283 3DEF GDP 0.0000007969 0.59758 22.2857
284 4A4Z ANP 0.007079 0.42769 22.8571
285 2ZFI ADP 0.000006051 0.57934 23.2323
286 2XT3 ADP 0.000001712 0.63916 24
287 2ZPA ADP 0.0005095 0.41244 24
288 3FVQ ATP 0.0003286 0.46294 24.2424
289 5L3R GCP 0.000004362 0.52715 25.1429
290 4IDN GNP 0.00005881 0.49033 25.1429
291 2C04 GCP 0.0001545 0.4869 25.1429
292 3EC1 GDP 0.00000002028 0.53232 25.2525
293 5GVR LMR 0.0003649 0.50436 25.2525
294 4D81 ADP 0.0001656 0.49078 25.2525
295 4V0K GDP 0.0000008148 0.55685 26.0355
296 2XTN GTP 0.0000008413 0.56227 26.2857
297 5KDO GDP 0.0000007046 0.57835 27.027
298 2FH5 GTP 0.000000000005553 0.79904 28
299 1UPT GTP 0.00000000004768 0.74849 28.3333
300 1JJV ATP 0.00006366 0.54789 28.5714
301 1WF3 GNP 0.0000000009753 0.67102 29.1429
302 3KTA AP5 0.0006691 0.46283 29.2929
303 3FYH ADP 0.003566 0.40837 29.2929
304 1MR3 G3D 0.000000007805 0.54525 29.7143
305 1FZQ GDP 0.000000002202 0.74924 30.2857
306 5KUT GDP 0.000000002313 0.55562 30.8571
307 1Y3A GDP 0.0000002107 0.58726 31.25
308 5MZN ADP 0.001485 0.47242 31.3131
309 1J2J GTP 0.00000000006435 0.73335 33.1325
310 1O3Y GTP 0.0000000002484 0.70897 33.1325
311 1M2O GNP 0.000000002297 0.65312 33.1429
312 1YZG GDP 0.00000000721 0.54445 33.1429
313 1KSH GDP 0.00000000006222 0.67203 33.7143
314 1S9D GDP 0.00000001652 0.69512 34.1463
315 1RE0 GDP 0.000000001534 0.53964 34.1463
316 2A5F GTP 0.000000000493 0.68807 34.2857
317 2ZEJ GDP 0.000001788 0.52807 34.2857
318 2QTV GNP 0.000000001819 0.64866 34.7305
319 5M04 GDP 0.00000000552 0.7417 36
320 1MKY GDP 0.0000000001771 0.57263 37.1429
321 3TBK ANP 0.0008846 0.48413 37.3737
322 1ZJ6 G3D 0.000000007011 0.71307 38.8571
323 1K6M AGS 0.002618 0.41707 38.8571
324 1R4A GNP 0.00000000008994 0.71819 40
325 1ZD9 GDP 0.00000000003675 0.77429 41.1429
326 1F6B GDP 0.00000006166 0.66753 42.2857
327 1M7B GTP 0.000000000000574 0.84166 42.8571
328 1GWN GTP 0.0000000000004486 0.74996 42.8571
329 3REF GDP 0.0000000003268 0.71306 43.4286
330 1NF3 GNP 0.0000000000002544 0.81141 45.7143
331 1A4R GNH 0.0000000001206 0.76228 45.7143
332 1A4R GDP 0.0000000001448 0.748 45.7143
333 2NGR GDP 0.000000000001375 0.89189 46.2857
334 1GRN GDP 0.00000000001196 0.80752 46.2857
335 4DID GDP 0.0000000002121 0.78634 46.2857
336 2NGR AF3 0.000000006571 0.75078 46.2857
337 1GRN AF3 0.00000003352 0.71399 46.2857
338 4ITR GDP 0.000000004177 0.59308 46.2857
339 4U5X GNP 0.0000000000215 0.78456 46.8571
340 3GJ7 GDP 0.0000000001592 0.8056 47.4286
341 3GJ4 GDP 0.0000000001655 0.80476 47.4286
342 3GJ8 GDP 0.0000000004092 0.77258 47.4286
343 3GJ5 GDP 0.0000000004102 0.77253 47.4286
344 5UWT GNP 0.000000000000008549 0.87451 48
345 5UWJ GNP 0.000000000000005995 0.85577 48
346 5DIF GNP 0.000000000000006106 0.85547 48
347 5UWI GNP 0.00000000000000755 0.85213 48
348 5UWW GNP 0.000000000000008327 0.85032 48
349 5UWU GNP 0.000000000000008438 0.85007 48
350 5UWR GNP 0.000000000000008549 0.85003 48
351 5UWQ GNP 0.000000000000008549 0.84992 48
352 5DHF GNP 0.000000000000008771 0.84945 48
353 5UWO GNP 0.000000000000009104 0.84904 48
354 5UWH GNP 0.00000000000001132 0.84537 48
355 1IBR GNP 0.00000000000001443 0.84126 48
356 5UWP GNP 0.000000000000008993 0.82995 48
357 4HAT GNP 0.00000000000001033 0.8277 48
358 5DI9 GNP 0.00000000000001066 0.82718 48
359 5UWS GNP 0.00000000000001288 0.82435 48
360 3GJ0 GDP 0.00000000016 0.80549 48
361 5BXQ GDP 0.0000000002057 0.78698 48
362 1WA5 GTP 0.00000000000003031 0.76166 48
363 3CH5 GDP 0.0000000007007 0.76131 48
364 3GJ3 GDP 0.0000000001741 0.58112 48
365 1KMQ GNP 0.0000000000001719 0.8403 48.5714
366 2J0V GDP 0.00000000006095 0.60277 48.5714
367 1E96 GTP 0.00000000000002276 0.85332 49.1429
368 1TX4 ALF GDP 0.000000000001043 0.80775 49.1429
369 5IRC GDP 0.0000000001337 0.78344 49.1429
370 5HPY GDP 0.00000000006156 0.77545 49.1429
371 1CXZ GSP 0.0000000000003252 0.76795 49.1429
372 1MH1 GNP 0.000000000002488 0.75477 49.1429
373 2W2X GSP 0.0000000000005037 0.74652 49.1429
374 1G4U GDP 0.000000004699 0.68128 49.1429
375 1OW3 GDP 0.00000000003523 0.65539 49.1429
376 1G4U AF3 0.00002257 0.58047 49.1429
377 3RAB GNP 0.00000000000001033 0.8671 49.7041
378 2WKQ GTP 0.00000000000002653 0.87403 49.7143
379 1I4D GDP 0.00000000002209 0.86315 49.7143
380 3M1I GTP 0.00000000000001643 0.86304 49.7143
381 3SBD GNP 0.00000000000001488 0.86079 49.7143
382 2FJU GSP 0.0000000000001048 0.77031 49.7143
383 1HE1 GDP 0.0000000005294 0.71345 49.7143
384 2GCO GNP 0.000000000006474 0.67913 49.7143
385 2GCN GDP 0.0000000003347 0.6556 49.7143
386 1HE1 AF3 0.00000238 0.61775 49.7143
387 1DS6 GDP 0.00000000003615 0.59499 49.7143
388 4D0N GDP 0.00000000006222 0.58505 49.7143
Pocket No.: 2; Query (leader) PDB : 1UAD; Ligand: GNP; Similar sites found: 12
This union binding pocket(no: 2) in the query (biounit: 1uad.bio1) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1KO8 6PG 0.0006568 0.41595 5.71429
2 4KFU ACP 0.00002619 0.40389 5.71429
3 1LES GLC FRU 0.02051 0.41636 8
4 1YXM ADE 0.00393 0.44463 8.08081
5 1X9I G6Q 0.006145 0.4248 8.08081
6 5SXS NIZ 0.0133 0.42592 8.57143
7 1UKZ ADP 0.00339 0.41926 8.57143
8 1D6Z HY1 0.01454 0.42727 9.09091
9 2GN3 MMA 0.047 0.40748 11.1111
10 1T3D CYS 0.007639 0.43143 12.1212
11 1OXV ANP 0.00007902 0.40083 18.1818
12 4LZB URA 0.02496 0.40465 18.8571
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