Receptor
PDB id Resolution Class Description Source Keywords
1UMZ 1.8 Å EC: 2.4.1.207 XYLOGLUCAN ENDOTRANSGLYCOSYLASE IN COMPLEX WITH THE XYLOGLUCAN NONASACCHARIDE XLLG. POPULUS TREMULA GLYCOSIDE HYDROLASE XET XTH XEH TRANSGLYCOSYLATION XYLOGLUCAN TRANSFERASE GLYCOSYLTRANSFERASE
Ref.: CRYSTAL STRUCTURES OF A POPLAR XYLOGLUCAN ENDOTRANSGLYCOSYLASE REVEAL DETAILS OF TRANSGLYCOSYLATION ACCEPTOR BINDING PLANT CELL V. 16 874 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BGC BGC XYS BGC XYS GAL A:1276;
B:1276;
Valid;
Valid;
none;
none;
submit data
914.81 n/a O(CC1...
NAG NAG BMA A:1273;
B:1273;
Part of Protein;
Part of Protein;
none;
none;
submit data
570.545 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1UMZ 1.8 Å EC: 2.4.1.207 XYLOGLUCAN ENDOTRANSGLYCOSYLASE IN COMPLEX WITH THE XYLOGLUCAN NONASACCHARIDE XLLG. POPULUS TREMULA GLYCOSIDE HYDROLASE XET XTH XEH TRANSGLYCOSYLATION XYLOGLUCAN TRANSFERASE GLYCOSYLTRANSFERASE
Ref.: CRYSTAL STRUCTURES OF A POPLAR XYLOGLUCAN ENDOTRANSGLYCOSYLASE REVEAL DETAILS OF TRANSGLYCOSYLATION ACCEPTOR BINDING PLANT CELL V. 16 874 2004
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1UMZ - BGC BGC XYS BGC XYS GAL n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1UMZ - BGC BGC XYS BGC XYS GAL n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1UMZ - BGC BGC XYS BGC XYS GAL n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BGC BGC XYS BGC XYS GAL; Similar ligands found: 74
No: Ligand ECFP6 Tc MDL keys Tc
1 BGC BGC XYS BGC XYS GAL 1 1
2 GLC BGC BGC XYS BGC XYS XYS GAL 0.855422 0.972222
3 GLC BGC BGC XYS BGC XYS XYS GAL GAL 0.855422 0.972222
4 GAL XYS XYS BGC BGC BGC XYS GAL BGC 0.855422 0.972222
5 GAL BGC BGC BGC XYS XYS 0.855422 0.972222
6 BGC BGC XYS BGC GAL XYS BGC XYS GAL 0.855422 0.972222
7 BGC BGC BGC XYS BGC XYS GAL 0.807229 0.972222
8 GAL BGC BGC BGC XYS BGC XYS 0.807229 0.972222
9 BGC BGC BGC XYS GAL 0.722892 0.972222
10 GLC BGC BGC XYS BGC XYS XYS 0.710843 0.972222
11 BGC BGC XYS BGC XYS BGC XYS 0.710843 0.972222
12 BGC BGC BGC XYS BGC XYS XYS 0.710843 0.972222
13 GAL BGC BGC XYS 0.691358 0.972222
14 BGC BGC BGC XYS BGC BGC 0.682353 0.972222
15 XYS BGC BGC BGC BGC XYS BGC BGC BGC 0.682353 0.972222
16 XYS BGC BGC XYS BGC XYS BGC BGC BGC 0.682353 0.972222
17 BGC BGC XYS BGC 0.635294 0.972222
18 NBG BGC BGC XYS BGC XYS XYS 0.630435 0.729167
19 BMA BMA 0.573333 0.944444
20 BGC BGC 0.573333 0.944444
21 GLO BGC BGC XYS BGC XYS XYS 0.539216 0.945946
22 BMA BMA GLA BMA BMA 0.477778 0.916667
23 GLC GLC GLC BGC 0.466667 0.916667
24 G2F BGC BGC BGC BGC BGC 0.438202 0.85
25 GAL NAG GAL BGC 0.431373 0.729167
26 LAT GLA 0.407407 0.916667
27 BMA MAN MAN MAN MAN 0.40625 0.916667
28 AGL GLC 0.402299 0.73913
29 MAN MAN MAN MAN MAN MAN MAN 0.401961 0.916667
30 CTT 0.4 0.916667
31 MAN BMA BMA BMA BMA BMA 0.4 0.916667
32 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.4 0.916667
33 BMA BMA BMA BMA BMA BMA 0.4 0.916667
34 BGC BGC BGC BGC BGC 0.4 0.916667
35 GLA GAL BGC 0.4 0.916667
36 GLC GLC BGC 0.4 0.916667
37 GLA GAL GLC 0.4 0.916667
38 CT3 0.4 0.916667
39 GAL GAL GAL 0.4 0.916667
40 CE6 0.4 0.916667
41 CEY 0.4 0.916667
42 B4G 0.4 0.916667
43 BGC GLC GLC GLC 0.4 0.916667
44 BMA MAN BMA 0.4 0.916667
45 GLC BGC BGC 0.4 0.916667
46 MT7 0.4 0.916667
47 BGC BGC BGC BGC BGC BGC 0.4 0.916667
48 MAN BMA MAN 0.4 0.916667
49 BGC GLC GLC 0.4 0.916667
50 GLC GLC GLC GLC GLC 0.4 0.916667
51 MTT 0.4 0.916667
52 DXI 0.4 0.916667
53 GLC BGC GLC 0.4 0.916667
54 CE5 0.4 0.916667
55 BGC BGC BGC BGC 0.4 0.916667
56 BGC GLC GLC GLC GLC GLC GLC 0.4 0.916667
57 CE8 0.4 0.916667
58 BGC GLC GLC GLC GLC 0.4 0.916667
59 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.4 0.916667
60 CTR 0.4 0.916667
61 CEX 0.4 0.916667
62 GLC GAL GAL 0.4 0.916667
63 GLC BGC BGC BGC 0.4 0.916667
64 MAN MAN BMA BMA BMA BMA 0.4 0.916667
65 GLC BGC BGC BGC BGC 0.4 0.916667
66 BGC BGC GLC 0.4 0.916667
67 BGC BGC BGC 0.4 0.916667
68 MLR 0.4 0.916667
69 MAN BMA BMA 0.4 0.916667
70 BGC BGC BGC GLC 0.4 0.916667
71 MAN BMA BMA BMA BMA 0.4 0.916667
72 BMA BMA BMA BMA BMA 0.4 0.916667
73 GLC BGC BGC BGC BGC BGC 0.4 0.916667
74 BMA BMA BMA 0.4 0.916667
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1UMZ; Ligand: BGC BGC XYS BGC XYS GAL; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1umz.bio2) has 15 residues
No: Leader PDB Ligand Sequence Similarity
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