Receptor
PDB id Resolution Class Description Source Keywords
1URX 1.7 Å EC: 3.2.1.81 CRYSTALLOGRAPHIC STRUCTURE OF BETA-AGARASE A IN COMPLEX WITH OLIGOAGAROSE ZOBELLIA GALACTANIVORANS HYDROLASE BETA-AGARASE AGAROSE GLYCOSIDE HYDROLASE FAMILDOUBLE HELIX TWO BINDING-SITES
Ref.: PARALLEL SUBSTRATE BINDING SITES IN A BETA-AGARASE NOVEL MODE OF ACTION ON DOUBLE-HELICAL AGAROSE STRUCTURE V. 12 623 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
AAL GAL AAL GAL AAL GAL AAL C:1;
 Valid;
 none;
 submit data
n/a n/a
CA A:1300;
 Part of Protein;
 none;
 submit data
40.078 Ca [Ca+2...
GLA AAL GAL AAL B:1;
 Valid;
 none;
 submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1URX 1.7 Å EC: 3.2.1.81 CRYSTALLOGRAPHIC STRUCTURE OF BETA-AGARASE A IN COMPLEX WITH OLIGOAGAROSE ZOBELLIA GALACTANIVORANS HYDROLASE BETA-AGARASE AGAROSE GLYCOSIDE HYDROLASE FAMILDOUBLE HELIX TWO BINDING-SITES
Ref.: PARALLEL SUBSTRATE BINDING SITES IN A BETA-AGARASE NOVEL MODE OF ACTION ON DOUBLE-HELICAL AGAROSE STRUCTURE V. 12 623 2004
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1URX - GLA AAL GAL AAL n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1URX - GLA AAL GAL AAL n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1URX - GLA AAL GAL AAL n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: AAL GAL AAL GAL AAL GAL AAL; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Ligand no: 2; Ligand: GLA AAL GAL AAL; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: AAL GAL AAL GAL AAL GAL AAL; Similar ligands found: 1
No: Ligand Similarity coefficient
1 AAL GAL AAL GAL AAL GAL AAL 1.0000
Ligand no: 2; Ligand: GLA AAL GAL AAL; Similar ligands found: 1
No: Ligand Similarity coefficient
1 GLA AAL GAL AAL 1.0000
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1URX; Ligand: GLA AAL GAL AAL; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1urx.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1URX; Ligand: AAL GAL AAL GAL AAL GAL AAL; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1urx.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
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