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Receptor
PDB id Resolution Class Description Source Keywords
1V1A 2.1 Å EC: 2.-.-.- 2-KETO-3-DEOXYGLUCONATE KINASE FROM THERMUS THERMOPHILUS WITH BOUND 2-KETO-3-DEOXYGLUCONATE AND ADP THERMUS THERMOPHILUS 2-KETO-3-DEOXYGLUCONATE KINASE ATP THERMUS THERMOPHILUS STRUCTURAL GENOMICS TRANSFERASE RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE RSGI
Ref.: STRUCTURE OF THERMUS THERMOPHILUS 2-KETO-3-DEOXYGLUCONATE KINASE: EVIDENCE FOR RECOGNITION OF AN OPEN CHAIN SUBSTRATE J.MOL.BIOL. V. 340 477 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ADP A:1303;
B:1303;
Valid;
Valid;
none;
none;
submit data
427.201 C10 H15 N5 O10 P2 c1nc(...
KDG A:1302;
B:1302;
Valid;
Valid;
none;
none;
submit data
178.14 C6 H10 O6 C([C@...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1V1A 2.1 Å EC: 2.-.-.- 2-KETO-3-DEOXYGLUCONATE KINASE FROM THERMUS THERMOPHILUS WITH BOUND 2-KETO-3-DEOXYGLUCONATE AND ADP THERMUS THERMOPHILUS 2-KETO-3-DEOXYGLUCONATE KINASE ATP THERMUS THERMOPHILUS STRUCTURAL GENOMICS TRANSFERASE RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE RSGI
Ref.: STRUCTURE OF THERMUS THERMOPHILUS 2-KETO-3-DEOXYGLUCONATE KINASE: EVIDENCE FOR RECOGNITION OF AN OPEN CHAIN SUBSTRATE J.MOL.BIOL. V. 340 477 2004
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 269 families.
1 1V1A - KDG C6 H10 O6 C([C@@H]([....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 237 families.
1 1V1A - KDG C6 H10 O6 C([C@@H]([....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 2VAR - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
2 1V1A - KDG C6 H10 O6 C([C@@H]([....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ADP; Similar ligands found: 452
No: Ligand ECFP6 Tc MDL keys Tc
1 ADP 1 1
2 HEJ 0.9 1
3 ATP 0.9 1
4 A2D 0.895522 0.971831
5 5FA 0.887324 1
6 AQP 0.887324 1
7 AP5 0.884058 0.971831
8 B4P 0.884058 0.971831
9 BA3 0.869565 0.971831
10 AN2 0.84507 0.985915
11 AT4 0.84507 0.958904
12 M33 0.833333 0.958333
13 ACQ 0.826667 0.972222
14 A 0.823529 0.971429
15 AMP 0.823529 0.971429
16 ACP 0.821918 0.972222
17 6YZ 0.818182 0.972222
18 APR 0.810811 0.971831
19 AR6 0.810811 0.971831
20 ANP 0.802632 0.972222
21 SAP 0.8 0.945946
22 AGS 0.8 0.945946
23 AD9 0.8 0.972222
24 ADX 0.783784 0.873418
25 CA0 0.783784 0.945205
26 TAT 0.779221 0.958904
27 T99 0.779221 0.958904
28 50T 0.773333 0.958333
29 ABM 0.763889 0.917808
30 APC 0.763158 0.958904
31 PRX 0.763158 0.893333
32 ATF 0.759494 0.958904
33 A22 0.753086 0.985915
34 AP2 0.743243 0.958904
35 A12 0.743243 0.958904
36 SRA 0.736111 0.918919
37 ADQ 0.73494 0.945205
38 25L 0.732558 0.985915
39 5AL 0.725 0.931507
40 2A5 0.717949 0.918919
41 A1R 0.714286 0.907895
42 AU1 0.714286 0.972222
43 A3R 0.714286 0.907895
44 ATR 0.708861 0.971429
45 ADP PO3 0.708861 0.943662
46 PAP 0.708861 0.985714
47 SRP 0.707317 0.906667
48 7D3 0.706667 0.905405
49 25A 0.702381 0.971831
50 9X8 0.697674 0.92
51 OAD 0.697674 0.945205
52 RBY 0.6875 0.932432
53 ADV 0.6875 0.932432
54 00A 0.686047 0.883117
55 OOB 0.682353 0.931507
56 5SV 0.682353 0.848101
57 8QN 0.682353 0.931507
58 3OD 0.681818 0.945205
59 BIS 0.681818 0.933333
60 ALF ADP 0.674699 0.87013
61 ADP ALF 0.674699 0.87013
62 AMO 0.674419 0.932432
63 4AD 0.674419 0.92
64 PAJ 0.674419 0.884615
65 GAP 0.670732 0.893333
66 MAP 0.670588 0.945946
67 AHX 0.666667 0.896104
68 VO4 ADP 0.666667 0.931507
69 DLL 0.666667 0.931507
70 ADP VO4 0.666667 0.931507
71 PTJ 0.662921 0.896104
72 3UK 0.659091 0.918919
73 SON 0.658228 0.932432
74 LMS 0.653333 0.82716
75 LAD 0.651685 0.860759
76 WAQ 0.651685 0.883117
77 B5V 0.651685 0.906667
78 PR8 0.651685 0.85
79 ITT 0.65 0.943662
80 7D4 0.65 0.905405
81 G5P 0.648936 0.921053
82 XYA 0.647059 0.84507
83 ADN 0.647059 0.84507
84 RAB 0.647059 0.84507
85 1ZZ 0.644444 0.839506
86 ME8 0.644444 0.839506
87 FYA 0.644444 0.905405
88 NB8 0.644444 0.896104
89 TXA 0.644444 0.932432
90 6AD 0.642857 0.909091
91 ADP BMA 0.640449 0.918919
92 G3A 0.638298 0.921053
93 DAL AMP 0.632184 0.905405
94 AFH 0.631579 0.884615
95 9SN 0.630435 0.871795
96 9ZA 0.625 0.907895
97 DQV 0.625 0.958333
98 9ZD 0.625 0.907895
99 GTA 0.625 0.886076
100 YAP 0.623656 0.894737
101 B5M 0.623656 0.894737
102 FA5 0.623656 0.906667
103 B5Y 0.623656 0.894737
104 UP5 0.622449 0.92
105 HFD 0.619048 0.945946
106 XAH 0.617021 0.839506
107 AV2 0.616279 0.917808
108 AOC 0.615385 0.821918
109 48N 0.612245 0.896104
110 4UV 0.610526 0.894737
111 6V0 0.606061 0.896104
112 NAI 0.606061 0.907895
113 DND 0.606061 0.932432
114 NAX 0.606061 0.873418
115 NXX 0.606061 0.932432
116 TXD 0.606061 0.907895
117 5N5 0.605634 0.819444
118 5AS 0.604938 0.77907
119 A4P 0.60396 0.843373
120 DAT 0.60241 0.905405
121 A2R 0.602273 0.985915
122 TXE 0.6 0.907895
123 OMR 0.6 0.851852
124 4UU 0.597938 0.894737
125 GA7 0.597938 0.906667
126 A A 0.597826 0.944444
127 A4D 0.597222 0.819444
128 5CD 0.597222 0.805556
129 AP0 0.594059 0.896104
130 4TC 0.594059 0.896104
131 A3P 0.592593 0.971429
132 T5A 0.592233 0.841463
133 139 0.592233 0.873418
134 7D5 0.592105 0.878378
135 ATP A A A 0.589474 0.930556
136 LAQ 0.585859 0.839506
137 MYR AMP 0.585106 0.817073
138 F2R 0.580952 0.864198
139 YLP 0.58 0.819277
140 UPA 0.578431 0.907895
141 7DD 0.578313 0.985714
142 3AM 0.576923 0.929577
143 ADJ 0.576923 0.851852
144 COD 0.575472 0.811765
145 NAD 0.575472 0.931507
146 3AT 0.574713 0.971831
147 JB6 0.574468 0.883117
148 4UW 0.574257 0.860759
149 EP4 0.573333 0.753247
150 A2P 0.573171 0.957143
151 CNA 0.571429 0.932432
152 TYM 0.568627 0.906667
153 PPS 0.568182 0.873418
154 DTA 0.565789 0.786667
155 M2T 0.565789 0.734177
156 AR6 AR6 0.565657 0.917808
157 A3D 0.564815 0.918919
158 80F 0.564815 0.841463
159 3DH 0.564103 0.773333
160 G5A 0.563218 0.77907
161 YLB 0.563107 0.819277
162 YLC 0.563107 0.839506
163 AMP DBH 0.561224 0.893333
164 TYR AMP 0.561224 0.87013
165 MTA 0.558442 0.773333
166 DTP 0.556818 0.905405
167 AHZ 0.554455 0.817073
168 NA7 0.553191 0.958904
169 IOT 0.552381 0.831325
170 ZAS 0.55 0.766234
171 7MD 0.55 0.8625
172 ARG AMP 0.55 0.829268
173 IMO 0.548781 0.929577
174 YLA 0.54717 0.819277
175 NAE 0.544643 0.894737
176 TAD 0.544554 0.884615
177 A5A 0.544444 0.807229
178 2AM 0.544304 0.943662
179 TSB 0.543478 0.819277
180 6RE 0.54321 0.759494
181 AYB 0.542056 0.809524
182 NAQ 0.539823 0.871795
183 V3L 0.539326 0.971831
184 SSA 0.538462 0.8
185 AF3 ADP 3PG 0.538462 0.8375
186 ZID 0.535088 0.918919
187 LPA AMP 0.533981 0.817073
188 52H 0.532609 0.77907
189 VMS 0.532609 0.788235
190 54H 0.532609 0.788235
191 BTX 0.53211 0.841463
192 A3N 0.53012 0.786667
193 J7C 0.53012 0.769231
194 5X8 0.528736 0.763158
195 BT5 0.527273 0.831325
196 8X1 0.526882 0.752809
197 5CA 0.526882 0.8
198 53H 0.526882 0.77907
199 ARU 0.526316 0.860759
200 EAD 0.525862 0.873418
201 RGT 0.525253 0.958904
202 OVE 0.52439 0.905405
203 S4M 0.52381 0.666667
204 7DT 0.522727 0.985714
205 GDP 0.522222 0.92
206 DDS 0.522222 0.878378
207 AVV 0.521277 0.896104
208 NDE 0.521008 0.932432
209 7MC 0.518868 0.841463
210 DSH 0.518072 0.725
211 MAO 0.517647 0.759036
212 NSS 0.515789 0.8
213 DSZ 0.515789 0.8
214 LSS 0.515789 0.761364
215 P5A 0.515464 0.744444
216 DZD 0.513514 0.884615
217 NVA LMS 0.510417 0.752809
218 9K8 0.510204 0.714286
219 12D 0.509615 0.785714
220 M24 0.508772 0.85
221 YLY 0.508772 0.809524
222 P1H 0.508333 0.851852
223 5AD 0.506849 0.746479
224 GJV 0.505882 0.75
225 LEU LMS 0.505155 0.752809
226 AMP NAD 0.504505 0.905405
227 4TA 0.504505 0.807229
228 G A A A 0.504505 0.871795
229 NAJ PZO 0.504425 0.848101
230 GSU 0.5 0.77907
231 128 0.5 0.776471
232 KAA 0.5 0.752809
233 71V 0.5 0.907895
234 A3G 0.5 0.8
235 NDC 0.5 0.871795
236 7D7 0.5 0.743243
237 N0B 0.495726 0.819277
238 NJP 0.495495 0.945946
239 ODP 0.495495 0.909091
240 2SA 0.494624 0.932432
241 6C6 0.494505 0.881579
242 SFG 0.494382 0.75
243 0WD 0.491071 0.921053
244 YSA 0.490196 0.77907
245 PO4 PO4 A A A A PO4 0.489796 0.902778
246 SAM 0.48913 0.690476
247 6IA 0.48913 0.8375
248 A7D 0.488636 0.776316
249 6FA 0.488 0.841463
250 FB0 0.487805 0.804598
251 NAJ PYZ 0.487179 0.807229
252 A5D 0.483516 0.786667
253 IDP 0.483516 0.918919
254 SA8 0.483516 0.707317
255 PGS 0.483146 0.883117
256 MHZ 0.483146 0.697674
257 DA 0.482353 0.878378
258 D5M 0.482353 0.878378
259 NEC 0.482353 0.746667
260 NIA 0.481928 0.822785
261 Y3J 0.480519 0.726027
262 8PZ 0.480392 0.8
263 FAD 0.480315 0.851852
264 FAS 0.480315 0.851852
265 FDA 0.48 0.833333
266 N6P 0.479592 0.915493
267 GGZ 0.479167 0.825
268 U A 0.478261 0.907895
269 SAH 0.478261 0.74359
270 SAI 0.478261 0.734177
271 A G 0.477876 0.883117
272 NPW 0.477477 0.886076
273 NDP 0.477477 0.921053
274 AAM 0.476744 0.971429
275 C2R 0.47561 0.90411
276 AMZ 0.47561 0.916667
277 A A A 0.474747 0.905405
278 GTP 0.473684 0.92
279 U A G G 0.473684 0.883117
280 SMM 0.473684 0.686047
281 NZQ 0.473214 0.909091
282 TXP 0.473214 0.921053
283 A3S 0.47191 0.810811
284 SFD 0.46875 0.734043
285 AIR 0.468354 0.901408
286 AAT 0.468085 0.707317
287 EEM 0.468085 0.690476
288 J7V 0.466667 0.833333
289 Z5A 0.466667 0.77907
290 7C5 0.466667 0.818182
291 62F 0.465649 0.8625
292 HDV 0.463158 0.893333
293 FAY 0.462121 0.8625
294 A3T 0.461538 0.821918
295 ETB 0.461538 0.833333
296 DCA 0.461538 0.823529
297 A6D 0.46 0.722892
298 A U 0.459459 0.87013
299 GEK 0.459184 0.7375
300 6K6 0.459184 0.930556
301 RFL 0.458647 0.821429
302 NAP 0.458333 0.945205
303 S7M 0.458333 0.690476
304 4YB 0.457944 0.761364
305 WSA 0.454545 0.788235
306 TAP 0.454545 0.907895
307 FNK 0.454545 0.804598
308 COA 0.453782 0.823529
309 0T1 0.453782 0.823529
310 101 0.453488 0.878378
311 XNP 0.452174 0.873418
312 NA0 0.45082 0.932432
313 7RP 0.448276 0.928571
314 GP3 0.446809 0.921053
315 TM1 0.446602 0.77381
316 APU 0.446429 0.894737
317 PUA 0.445378 0.884615
318 V1N 0.443396 0.917808
319 7RA 0.443182 0.957747
320 COS 0.442623 0.804598
321 AMX 0.442623 0.833333
322 30N 0.442623 0.752688
323 CAO 0.442623 0.795455
324 QQY 0.44186 0.815789
325 ACK 0.44186 0.861111
326 649 0.441441 0.744444
327 0UM 0.44 0.698795
328 NHD 0.439655 0.905405
329 CMX 0.439024 0.823529
330 SCO 0.439024 0.823529
331 GCP 0.438776 0.896104
332 8BR 0.438202 0.906667
333 GNH 0.4375 0.907895
334 8Q2 0.4375 0.772727
335 3AD 0.4375 0.805556
336 NVA 2AD 0.43617 0.759494
337 62X 0.435644 0.666667
338 FCX 0.435484 0.795455
339 ACO 0.435484 0.795455
340 FAM 0.435484 0.804598
341 9JJ 0.434783 0.8625
342 GNP 0.434343 0.896104
343 9GM 0.434343 0.896104
344 NMX 0.433071 0.76087
345 MGP 0.43299 0.884615
346 26A 0.432099 0.763158
347 HAX 0.432 0.804598
348 K15 0.431373 0.682353
349 DG1 0.430894 0.921053
350 1DG 0.430894 0.921053
351 QQX 0.430233 0.805195
352 2VA 0.430108 0.8
353 S8M 0.43 0.759494
354 2MC 0.429688 0.769231
355 6G0 0.428571 0.884615
356 P5F 0.428571 0.823529
357 FYN 0.428571 0.823529
358 3KK 0.428571 0.804598
359 A C A C 0.428571 0.848101
360 7L1 0.427419 0.795455
361 FAI 0.426966 0.916667
362 RMB 0.426966 0.873239
363 AS 0.426966 0.833333
364 1RB 0.425287 0.885714
365 CA6 0.425197 0.729167
366 SOP 0.425197 0.804598
367 OXK 0.425197 0.804598
368 MCD 0.425197 0.804598
369 COK 0.425197 0.804598
370 G1R 0.424242 0.907895
371 SXZ 0.423077 0.710843
372 CC5 0.423077 0.816901
373 F2N 0.422535 0.813953
374 EO7 0.422222 0.788235
375 ANZ 0.422018 0.8
376 1VU 0.421875 0.795455
377 CMC 0.421875 0.804598
378 CO6 0.421875 0.804598
379 ZDA 0.421053 0.864865
380 GKE 0.420561 0.884615
381 GDC 0.420561 0.884615
382 GDD 0.420561 0.884615
383 NFD 0.420168 0.883117
384 GSP 0.42 0.873418
385 D3Y 0.42 0.789474
386 MC4 0.419847 0.76087
387 3D1 0.419753 0.773333
388 3L1 0.419753 0.773333
389 FA9 0.41958 0.864198
390 5GP 0.419355 0.906667
391 G 0.419355 0.906667
392 KB1 0.419048 0.698795
393 CAJ 0.418605 0.804598
394 SCD 0.418605 0.823529
395 CMP 0.417582 0.901408
396 2BA 0.417582 0.915493
397 SO8 0.416667 0.789474
398 VRT 0.416667 0.769231
399 N01 0.416667 0.905405
400 IVC 0.415385 0.813953
401 1HE 0.415385 0.786517
402 A1S 0.415385 0.804598
403 BCO 0.415385 0.804598
404 3HC 0.415385 0.813953
405 MLC 0.415385 0.804598
406 NMN AMP PO4 0.415254 0.87013
407 2FA 0.414634 0.813333
408 MGO 0.414141 0.860759
409 3NZ 0.413462 0.782051
410 COO 0.412214 0.804598
411 MCA 0.412214 0.795455
412 YE1 0.412214 0.813953
413 CAA 0.412214 0.813953
414 GAV 0.411765 0.884615
415 PRT 0.411215 0.931507
416 JLN 0.411111 0.890411
417 P2P 0.411111 0.902778
418 ZZB 0.410256 0.77381
419 SP1 0.409091 0.842105
420 RP1 0.409091 0.842105
421 2CP 0.409091 0.795455
422 SCA 0.409091 0.804598
423 103 0.409091 0.837838
424 PAX 0.408 0.829268
425 FAD NBT 0.407143 0.75
426 COW 0.406015 0.795455
427 3CP 0.406015 0.804598
428 IRC 0.406015 0.813953
429 BYC 0.406015 0.804598
430 CA8 0.406015 0.729167
431 1GZ 0.406015 0.795455
432 COF 0.406015 0.786517
433 HGG 0.406015 0.804598
434 2KQ 0.406015 0.786517
435 G2P 0.405941 0.884615
436 SLU 0.404959 0.770115
437 U A C C 0.404959 0.858974
438 RBZ 0.404494 0.849315
439 1CZ 0.404412 0.795455
440 FAQ 0.402985 0.804598
441 BCA 0.402985 0.795455
442 4CA 0.402985 0.795455
443 MTP 0.402439 0.730769
444 8OD 0.402062 0.945205
445 CO7 0.401515 0.804598
446 GRA 0.4 0.804598
447 G2R 0.4 0.884615
448 ENQ 0.4 0.916667
449 CNV FAD 0.4 0.8
450 GMV 0.4 0.896104
451 HXC 0.4 0.786517
452 HF7 0.4 0.893333
Ligand no: 2; Ligand: KDG; Similar ligands found: 4
No: Ligand ECFP6 Tc MDL keys Tc
1 KDG 1 1
2 SI3 0.431818 0.685714
3 NGF 0.422222 0.666667
4 KD0 0.404762 0.638889
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1V1A; Ligand: ADP; Similar sites found with APoc: 152
This union binding pocket(no: 1) in the query (biounit: 1v1a.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 2P3C 3TL None
2 1IDA 0PO None
3 4WG0 CHD None
4 5VN0 FAD 1.2945
5 4W6Z ETF 1.61812
6 5KMS FAD 1.61812
7 2YYY NAP 1.61812
8 2OO0 PLP 1.94175
9 3EYA TDP 1.94175
10 3OVR 5SP 2.19298
11 5JCM ISD 2.26537
12 5JCM NAD 2.26537
13 5JCM FAD 2.26537
14 3KLJ FAD 2.26537
15 2FLI DX5 2.27273
16 3FPF MTA 2.34899
17 3FPF TNA 2.34899
18 2F6U CIT 2.5641
19 5O0J 8BR 2.589
20 5BUK FAD 2.589
21 3G5S FAD 2.589
22 4UP3 FAD 2.589
23 5NA1 FAD 2.589
24 6CI9 F3V 2.7027
25 5EYY MDM 2.85714
26 5OD2 5ID 2.91262
27 2NPX NAD 2.91262
28 1QM5 PLP 2.91262
29 4CIB 7UZ 2.91262
30 1UA4 AMP 3.23625
31 2NYA MGD 3.23625
32 5N5U 7N8 3.23625
33 4C5N PXL 3.26087
34 4C5N ACP 3.26087
35 4YDU ADP 3.37553
36 3KA2 2NC 3.44828
37 3FSM 2NC 3.44828
38 5EOW FAD 3.45679
39 6FA4 D1W 3.46821
40 3DRW AMP 3.55987
41 3F8D FAD 3.55987
42 2WPF FAD 3.55987
43 2WPF WPF 3.55987
44 3GD4 NAD 3.55987
45 1FEC FAD 3.55987
46 1PJS NAD 3.55987
47 3AYI FAD 3.55987
48 4MZU TDR 3.55987
49 5HSA FAS 3.55987
50 2ZL4 ALA ALA ALA ALA 3.57143
51 2F1K NAP 3.58423
52 4RW3 TDA 3.64238
53 5FAW CHT 3.8835
54 5LWY OLB 4.20168
55 2QA1 FAD 4.20712
56 1PN0 FAD 4.20712
57 1GPE FAD 4.20712
58 1PN0 IPH 4.20712
59 4UCC ZKW 4.29185
60 2CDP GAL AAL GAL AAL GAL AAL 4.375
61 4Q5M ROC 4.4335
62 2ZXI FAD 4.53074
63 3HQP OXL 4.53074
64 5NII FAD 4.53074
65 3OIX FMN 4.53074
66 4F06 PHB 4.53074
67 4M52 M52 4.85437
68 4M52 FAD 4.85437
69 3GDN HBX 4.85437
70 2G50 PYR 4.85437
71 3RNM FAD 5.17241
72 3WSJ MK1 5.17241
73 4H4D 10E 5.17799
74 1CF2 NAP 5.17799
75 1NF8 BOG 5.31401
76 6B8O PSF 5.32544
77 1GXS BEZ 5.55556
78 2GAG FAD 5.71429
79 4N02 FNR 5.82524
80 2Q7V FAD 5.82524
81 5O3Q CMP 5.83333
82 3GGU 017 6.06061
83 3E1T FAD 6.14887
84 1T9D P22 6.14887
85 1R37 NAD 6.14887
86 1PS9 FAD 6.47249
87 6GAR FAD 6.47249
88 2ZRU FMN 6.79612
89 4V1F BQ1 6.97674
90 2P3B 3TL 7.07071
91 4NJS G08 7.07071
92 3ITJ FAD 7.11974
93 4JBL MET 7.11974
94 4WUP 3UF 7.30769
95 3UDG TMP 7.30897
96 6F97 FAD 7.44337
97 3SM2 478 7.57576
98 5ODQ FAD 7.69231
99 1T0S BML 7.76699
100 5WS9 OXL 7.76699
101 2I0K FAD 7.76699
102 2VT3 ATP 7.90698
103 1XZ3 ICF 8.04598
104 5T2Z 017 8.08081
105 1ZK7 FAD 8.09062
106 4YSX FAD 8.33333
107 2RGJ FAD 8.41424
108 1QO8 FAD 8.41424
109 3C3N FMN 8.41424
110 1YKJ FAD 8.73786
111 3S43 478 9.09091
112 3MWS 017 9.09091
113 2PHF MAN MAN 9.12698
114 2GND MAN MMA 9.12698
115 1Q8P MAN MMA 9.12698
116 2PHR MAN MAN 9.12698
117 2PHU MAN MAN MAN BMA MAN 9.12698
118 4KXL 6C6 9.21053
119 4UP4 GAL NAG 9.70874
120 3KV8 FAH 10.0719
121 5NM7 GLY 10.5263
122 2OWZ CIT 11.0032
123 1G0N PHH 11.3074
124 1G0N NDP 11.3074
125 5W7B MYR 12.766
126 3QFA FAD 12.931
127 3TAY MN0 13.4969
128 4XF6 ADP 13.9194
129 4XF6 INS 13.9194
130 4XF6 LIP 13.9194
131 2F5Z FAD 14.0625
132 2YVJ FAD 14.6789
133 1FL2 FAD 14.8387
134 3IHG FAD 15.2104
135 4EMJ FAD 15.8879
136 3G6N MET ALA SER 16.7539
137 5XJ7 87O 17.4129
138 4OGQ 7PH 18.75
139 3CQD ATP 19.0939
140 4YHQ G10 21.2121
141 3OTX AP5 33.0097
142 3NC9 TR3 33.657
143 2ABS ACP 34.3042
144 2JG1 ANP 36.5696
145 2JGV ADP 36.8932
146 4PVV HO4 36.8932
147 2HW1 ANP 36.9128
148 3LOO B4P 39.4822
149 4XDA RIB 39.8058
150 4XDA ADP 39.8058
151 1RKD RIB 42.0712
152 1RKD ADP 42.0712
Pocket No.: 2; Query (leader) PDB : 1V1A; Ligand: ADP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1v1a.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1V1A; Ligand: ADP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1v1a.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1V1A; Ligand: ADP; Similar sites found with APoc: 37
This union binding pocket(no: 4) in the query (biounit: 1v1a.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
1 1RYD GLC 1.2945
2 2DVZ GLU 1.94175
3 2IZ1 ATR 1.94175
4 3LZW NAP 1.94175
5 5N26 CPT 2.1978
6 4M7F BM3 2.21239
7 4HA6 FAD 2.26537
8 4JWK CTN 2.59067
9 3ZS7 ATP 2.66667
10 3RS8 APR 2.91262
11 5EEH P9P 2.91262
12 5EEH SAH 2.91262
13 2HQM FAD 2.91262
14 1BZL FAD 2.91262
15 4USF 6UI 3.28947
16 5TE1 7A2 3.55987
17 4IN9 SER TRP PHE PRO 3.61446
18 4J56 FAD 3.8835
19 3AI3 SOE 4.18251
20 3GJB AKG 4.20712
21 2O66 FLC 4.44444
22 6CFC BLG 5.17799
23 1XVB 3BR 5.17799
24 2FXU ATP 5.50162
25 6GMN F4E 5.76923
26 5X2N ALA 5.82524
27 6HKE MLT 5.82524
28 1NAA 6FA 6.14887
29 2VCN ISZ 6.51341
30 2RAB FAD 6.79612
31 2OG7 AHB 8.41424
32 1YP4 ADP 10.356
33 4RHE FMN 13.3971
34 4EN4 ATP 18.4466
35 4EN4 GT1 18.4466
36 4EN4 GT0 18.4466
37 3KP6 SAL 38.4106
Pocket No.: 5; Query (leader) PDB : 1V1A; Ligand: ADP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 1v1a.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 1V1A; Ligand: ADP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 1v1a.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 1V1A; Ligand: KDG; Similar sites found with APoc: 125
This union binding pocket(no: 7) in the query (biounit: 1v1a.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 2P3C 3TL None
2 2V0U FMN None
3 1RYO OXL 1.2945
4 2H7C COA 1.61812
5 4GKV NAD 1.61812
6 1BXK NAD 1.94175
7 5GWT NAD 2.15827
8 3OVR 5SP 2.19298
9 5WBF LAC 2.22222
10 5NUF NAD 2.26537
11 5NUE NAD 2.26537
12 2CVQ NDP 2.26537
13 4NTD FAD 2.26537
14 3X0V FAD 2.26537
15 2FLI DX5 2.27273
16 5ZCT ANP 2.28758
17 5O5Y GLC 2.589
18 5O0J GLC 2.589
19 6F7L FAD 2.589
20 4UP3 FAD 2.589
21 2GMH UQ5 2.589
22 1PZG A3D 2.589
23 5C2F JTH 2.8777
24 5OD2 GLC 2.91262
25 1T26 NAI 2.91262
26 1T26 GBD 2.91262
27 3TTI KBI 2.91262
28 4PLG NAI 2.91262
29 4PLG OXM 2.91262
30 5M90 JIF 2.91262
31 4BNU 9KQ 2.97398
32 3A1C ACP 3.13589
33 1UA4 GLC 3.23625
34 1UA4 BGC 3.23625
35 5A1T OXM 3.23625
36 4IV9 FAD 3.23625
37 5TS5 FAD 3.23625
38 6EXF LYS 3.23625
39 6BLD DXJ 3.23625
40 4I4Z 2NE 3.27273
41 3FSM 2NC 3.44828
42 3KA2 2NC 3.44828
43 5OJI ISN 3.46154
44 3UXL CFI 3.55987
45 1RSG FAD 3.55987
46 4PLT NAI 3.55987
47 4PLT OXM 3.55987
48 1Z82 NDP 3.55987
49 4M26 SIN 3.55987
50 4M26 ZZU 3.55987
51 1KC7 PPR 3.8835
52 5A5W GUO 3.95257
53 2OFV 242 3.97112
54 1OIJ AKG 3.98671
55 3U7S 017 4.0404
56 2Q1W NAD 4.20712
57 1GPE FAD 4.20712
58 3CV2 OXL 4.20712
59 3A06 NDP 4.20712
60 2ZSC BTN 4.25532
61 1C3V NDP 4.4898
62 4FWE FAD 4.53074
63 1UJP CIT 4.53074
64 5MB4 NAG 4.53074
65 4B3J COA 4.53074
66 4EVQ PHB 4.53074
67 4GUT FAD 4.83871
68 4HSU FAD 4.83871
69 2A92 NAI 5.17799
70 2X7J TPP 5.17799
71 5XFV FMN 5.17799
72 5XDT MB3 5.19481
73 1Z8O DEB 5.50162
74 1LCF OXL 5.50162
75 4BVA T3 5.82524
76 5TQZ GLC 6
77 1Q6O LG6 6.01852
78 1SOW NAD 6.14887
79 1R37 NAD 6.14887
80 1UPA TPP 6.14887
81 2IHT TPP 6.14887
82 6CD1 PLG 6.47249
83 1Q3Q ANP 6.47249
84 4WXG 2BO 6.54206
85 5Z2F NAP 6.79245
86 4DZ1 DAL 6.94981
87 3ITJ FAD 7.11974
88 1ZC9 PMP 7.11974
89 3WGC PLG 7.11974
90 1CX4 CMP 7.21311
91 1B8U NAD 7.29483
92 1VM6 NAD 7.45614
93 2FXD DR7 8.08081
94 5MDH NAD 8.41424
95 4MDH NAD 8.41424
96 5A0U CHT 8.41424
97 5GUD 2IT 8.73786
98 5GUD NDP 8.73786
99 3LJU IP9 9.38511
100 4UP4 GAL NAG 9.70874
101 4TQK NAG 9.70874
102 1DFO PLG 10.6796
103 3EXS 5RP 11.3122
104 5JWI ARG GLU 12.2977
105 4B1M FRU FRU 12.4324
106 4XF6 ADP 13.9194
107 4XF6 LIP 13.9194
108 4XF6 INS 13.9194
109 3NZW BOC TY5 ALA RE0 ABN 17.2093
110 3CQD ATP 19.0939
111 2J9D ADP 22.6891
112 3OTX AP5 33.0097
113 3NC9 TR3 33.657
114 2ABS ACP 34.3042
115 3B1Q NOS 34.3042
116 2I6A 5I5 35.2751
117 2JG1 TA6 36.5696
118 4PVV HO4 36.8932
119 2HW1 FRU 36.9128
120 3LOO B4P 39.4822
121 4XDA ADP 39.8058
122 4XDA RIB 39.8058
123 1RKD RIB 42.0712
124 1RKD ADP 42.0712
125 5YSQ INS 43.3566
Pocket No.: 8; Query (leader) PDB : 1V1A; Ligand: KDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 1v1a.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 1V1A; Ligand: KDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 1v1a.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 1V1A; Ligand: KDG; Similar sites found with APoc: 62
This union binding pocket(no: 10) in the query (biounit: 1v1a.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
1 1LNX URI None
2 5XGX DAS DLY 1.2945
3 5DEP UD1 1.93798
4 3EYA TDP 1.94175
5 3ICT FAD 1.94175
6 1N1D C2G 2.32558
7 3FQ8 PMP 2.91262
8 3T3C 017 3.0303
9 2PZM UDP 3.23625
10 2PZM NAD 3.23625
11 2DVX 23A 3.23625
12 1REO FAD 3.23625
13 5NN0 92H 3.23625
14 5ZAI COA 3.4749
15 4AT0 FAD 3.55987
16 4M26 AKG 3.55987
17 1YY5 FAD 3.55987
18 1GUZ NAD 3.55987
19 5FAW CHT 3.8835
20 3OZ2 FAD 3.8835
21 2XK9 XK9 3.8835
22 6EK3 OUL 4.0724
23 1YRO UDP 4.1958
24 4A59 AMP 4.20712
25 4ZSY RW2 4.20712
26 4XYM A12 4.34783
27 5KZD RCJ 4.43686
28 5XWC NAP 4.53074
29 5XWC 8GL 4.53074
30 5XWC 2IT 4.53074
31 2ZXI FAD 4.53074
32 5KBE IPH 4.80349
33 4GUS FAD 4.83871
34 1UXG FUM 4.85437
35 1UXG NAD 4.85437
36 1TDF NAP 5.17799
37 1LDN NAD 5.17799
38 4JEJ 1GP 5.32787
39 3MJY IJZ 5.50162
40 3MJY FMN 5.50162
41 5ESO ISC 5.82524
42 5ESO TDP 5.82524
43 1VBO MAN 6.04027
44 5TBM 79A 6.83761
45 5T9F NAP 7.38007
46 5T9F TYR 7.38007
47 1VKF CIT 7.44681
48 1CZA G6P 7.76699
49 6C6O ENG 8.09062
50 3ETG GLU 8.73786
51 3ETG NDP 8.73786
52 6C8T EQJ 8.73786
53 3VKC FPQ 8.74126
54 3NT6 FAD 9.06149
55 2GMV PEP 9.06149
56 4POJ 2VP 9.52381
57 3NTD FAD 10.0324
58 4ZLU ADP 11.9741
59 1QPR PPC 13.7324
60 1OZH HE3 14.8867
61 3LU1 NAD 15.534
62 1ZPD DPX 17.4757
Pocket No.: 11; Query (leader) PDB : 1V1A; Ligand: KDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 1v1a.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 1V1A; Ligand: KDG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 1v1a.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
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