Receptor
PDB id Resolution Class Description Source Keywords
1V84 1.82 Å EC: 2.4.1.135 CRYSTAL STRUCTURE OF HUMAN GLCAT-P IN COMPLEX WITH N- ACETYLLACTOSAMINE, UDP, AND MN2+ HOMO SAPIENS TRANSFERASE GLYCOPROTEIN GLYCOCYLTRANSFERASE HNK-1 EPITOP
Ref.: STRUCTURAL BASIS FOR ACCEPTOR SUBSTRATE RECOGNITION HUMAN GLUCURONYLTRANSFERASE, GLCAT-P, AN ENZYME CRI THE BIOSYNTHESIS OF THE CARBOHYDRATE EPITOPE HNK-1 J.BIOL.CHEM. V. 279 22693 2004
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GAL NAG B:507;
Valid;
none;
submit data
383.35 n/a O=C(N...
GAL NDG A:505;
Valid;
none;
submit data
383.35 n/a O=C(N...
MN A:501;
B:502;
Part of Protein;
Part of Protein;
none;
none;
submit data
54.938 Mn [Mn+2...
TLA A:500;
Invalid;
none;
submit data
150.087 C4 H6 O6 [C@@H...
UDP A:503;
B:504;
Valid;
Valid;
none;
none;
submit data
404.161 C9 H14 N2 O12 P2 C1=CN...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1V84 1.82 Å EC: 2.4.1.135 CRYSTAL STRUCTURE OF HUMAN GLCAT-P IN COMPLEX WITH N- ACETYLLACTOSAMINE, UDP, AND MN2+ HOMO SAPIENS TRANSFERASE GLYCOPROTEIN GLYCOCYLTRANSFERASE HNK-1 EPITOP
Ref.: STRUCTURAL BASIS FOR ACCEPTOR SUBSTRATE RECOGNITION HUMAN GLUCURONYLTRANSFERASE, GLCAT-P, AN ENZYME CRI THE BIOSYNTHESIS OF THE CARBOHYDRATE EPITOPE HNK-1 J.BIOL.CHEM. V. 279 22693 2004
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1V83 - UDP C9 H14 N2 O12 P2 C1=CN(C(=O....
2 1V84 - GAL NDG n/a n/a
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 1V83 - UDP C9 H14 N2 O12 P2 C1=CN(C(=O....
2 1V84 - GAL NDG n/a n/a
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 1V83 - UDP C9 H14 N2 O12 P2 C1=CN(C(=O....
2 1V84 - GAL NDG n/a n/a
3 1KWS - UGA C15 H22 N2 O18 P2 C1=CN(C(=O....
4 3CU0 - UDP C9 H14 N2 O12 P2 C1=CN(C(=O....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GAL NAG; Similar ligands found: 173
No: Ligand ECFP6 Tc MDL keys Tc
1 GAL NAG 1 1
2 NGA GAL 1 1
3 NAG GAL 1 1
4 NAG NGA 0.693548 0.9375
5 NAG MBG 0.693548 0.957447
6 NAG A2G 0.693548 0.9375
7 MAN NAG 0.66129 1
8 NAG GAL BGC 0.657143 1
9 NAG GAL GAL NAG GAL 0.652778 0.9375
10 CBS 0.640625 0.9375
11 CBS CBS 0.640625 0.9375
12 NAG NDG 0.640625 0.9375
13 NAG GDL 0.640625 0.9375
14 NGA GLA GAL BGC 0.635135 1
15 NAG GAL NAG 0.633803 0.9375
16 NAG MAN MAN MAN NAG 0.631579 0.9375
17 NGA GAL BGC 0.623188 1
18 FUC BGC GAL NAG 0.615385 0.978261
19 MBG A2G 0.606061 0.957447
20 A2G MBG 0.606061 0.957447
21 NAG NAG NAG NAG 0.602941 0.918367
22 NAG NAG NDG 0.602941 0.918367
23 NAG NAG 0.602941 0.846154
24 NAG NAG NAG NAG NDG NAG 0.602941 0.918367
25 NAG NAG NAG NAG NAG NAG 0.602941 0.918367
26 NAG NAG NAG NAG NDG 0.602941 0.918367
27 NDG NAG NAG NAG 0.602941 0.918367
28 NDG NAG NAG NDG NAG 0.602941 0.918367
29 NAG NAG NAG NDG 0.602941 0.918367
30 NAG NAG NAG NAG NAG NAG NAG NAG 0.602941 0.918367
31 NDG NAG NAG 0.602941 0.918367
32 NDG NAG NAG NDG 0.602941 0.918367
33 CTO 0.602941 0.918367
34 NAG NAG NAG NAG NAG 0.602941 0.918367
35 NAG NAG NAG 0.602941 0.918367
36 FUC GLA A2G 0.597222 0.978261
37 A2G GLA FUC 0.597222 0.978261
38 FUC GAL A2G 0.597222 0.978261
39 A2G GAL FUC 0.597222 0.978261
40 NGA GAL FUC 0.597222 0.978261
41 FUC GL0 A2G 0.597222 0.978261
42 NDG NAG 0.597015 0.918367
43 NAG MAN MMA 0.583333 0.957447
44 3QL 0.577465 0.865385
45 MAN MAN NAG 0.567568 0.957447
46 GAL NAG GAL FUC 0.564103 0.978261
47 GLA NAG GAL FUC 0.564103 0.978261
48 NAG MAN BMA 0.56 1
49 NAG MAN MAN 0.56 1
50 LB2 0.559322 0.733333
51 MAG 0.559322 0.893617
52 2F8 0.559322 0.893617
53 M3M 0.559322 0.733333
54 MAN GLC 0.559322 0.733333
55 BGC FUC GAL FUC A2G 0.548781 0.957447
56 GLC FUC GAL FUC A2G 0.548781 0.957447
57 FUC GAL NAG GAL FUC 0.536585 0.957447
58 AH0 NAG 0.532468 0.833333
59 NAG AMU 0.532468 0.9
60 NAG MUB 0.532468 0.9
61 NAG NGO 0.527027 0.865385
62 GN1 0.52381 0.75
63 NG1 0.52381 0.75
64 GLC GAL NAG GAL 0.518987 1
65 BGC BGC BGC GLC BGC BGC 0.515625 0.733333
66 BGC BGC BGC ASO BGC BGC ASO 0.515625 0.733333
67 BGC BGC BGC 0.515625 0.733333
68 GLC BGC BGC BGC BGC BGC BGC 0.515625 0.733333
69 BGC BGC BGC BGC BGC 0.515625 0.733333
70 GLC BGC BGC BGC 0.515625 0.733333
71 NAG NAG NAG NAG NAG NAG NAG 0.512195 0.833333
72 NAG BDP NAG BDP NAG BDP NAG 0.511905 0.9
73 NAG GCU NAG GCU NAG GCU 5AX 0.511905 0.9
74 3YW 0.507463 0.913043
75 MA8 0.507042 0.843137
76 NAG NM9 0.506494 0.882353
77 NAG GAL GAL NAG 0.506329 0.9375
78 GAL NAG GAL NAG GAL NAG 0.506329 0.918367
79 A2G GAL BGC FUC 0.505882 0.978261
80 NAG GAL 2NA 0.505495 0.882353
81 GAL NGA 0.5 1
82 A2G GAL 0.5 1
83 NOJ NAG NAG 0.5 0.833333
84 NOJ NAG NAG NAG 0.5 0.818182
85 NGT NAG 0.5 0.775862
86 GAL A2G 0.5 1
87 GAL NAG GAL BGC 0.493671 1
88 BGC GAL NAG GAL 0.493671 1
89 LAT NAG GAL 0.493671 1
90 GAL NGA A2G 0.493151 0.918367
91 BGC BGC GLC 0.492537 0.733333
92 A2G GAL NAG FUC 0.488372 0.918367
93 GAL NGA GLA BGC GAL 0.487805 1
94 DLD 0.4875 0.775862
95 TNR 0.485714 0.86
96 BMA MAN MAN 0.485294 0.733333
97 GLC GAL NAG GAL FUC A2G 0.484211 0.918367
98 A2G GAL NAG FUC GAL GLC 0.484211 0.918367
99 FUC BGC GAL NAG GAL 0.483146 0.978261
100 NAG MAN GAL MAN MAN NAG GAL 0.483146 0.9375
101 NAG AH0 0.481928 0.833333
102 LEC NGA 0.481928 0.703125
103 FUC GAL NAG A2G FUC 0.477273 0.918367
104 NAG GAL FUC FUC A2G 0.477273 0.918367
105 HSQ 0.474576 0.888889
106 NAG 0.474576 0.888889
107 NDG 0.474576 0.888889
108 A2G 0.474576 0.888889
109 BM3 0.474576 0.888889
110 NGA 0.474576 0.888889
111 SN5 SN5 0.472222 0.803922
112 GAL NAG MAN 0.467532 1
113 MAN NAG GAL 0.467532 1
114 P3M 0.465753 0.6
115 GYU 0.464789 0.767857
116 NAG NAG NGT 0.464286 0.762712
117 6Y2 0.464286 0.703125
118 GAL NAG GAL 0.4625 0.957447
119 NAG GAL GAL 0.460526 1
120 GLA GAL NAG 0.460526 1
121 MAN BMA NAG 0.460526 1
122 SIA GAL NGA 0.458333 0.865385
123 NDG GAL 0.457143 1
124 NLC 0.457143 1
125 GAL NDG 0.457143 1
126 WZ5 0.455556 0.957447
127 BGA 0.449438 0.818182
128 NAG AMU NAG AMV 0.448276 0.882353
129 MMA MAN NAG MAN NAG NAG 0.448276 0.9
130 NAG BMA NAG MAN MAN NAG NAG 0.447917 0.918367
131 CTO TMX 0.444444 0.775862
132 TCG 0.444444 0.775862
133 NAG NAG BMA MAN 0.443182 0.865385
134 3PV 0.443182 0.9
135 NAG NDG BMA 0.439024 0.865385
136 NAG NAG BMA 0.439024 0.865385
137 GAL NAG SIA GAL 0.438095 0.849057
138 SIA GAL NAG GAL 0.438095 0.849057
139 GAL MGC 0.43662 0.957447
140 AO3 0.433333 0.692308
141 NAG MAN BMA NDG MAN NAG GAL 0.43 0.918367
142 CGC 0.428571 0.733333
143 6ZC 0.428571 0.68254
144 LEC 0.428571 0.68254
145 SIA NAG GAL GAL 0.427184 0.849057
146 M5G 0.425743 0.9375
147 57S 0.425 0.741379
148 FUC NAG 0.424658 0.956522
149 FUC GAL NAG GAL BGC 0.423913 0.978261
150 GUM 0.423913 0.803571
151 NAG GAL FUC 0.419753 0.978261
152 DR3 0.419753 0.978261
153 NAA NAA AMI 0.419355 0.661765
154 NAG BMA 0.418919 0.897959
155 NAG NAG BMA MAN NAG 0.418367 0.849057
156 GYT 0.417722 0.762712
157 1GN ACY GAL ACY 1GN BGC GAL BGC 0.417582 0.9375
158 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.417582 0.9375
159 NAG NAG BMA MAN MAN NAG NAG 0.417476 0.849057
160 8VZ 0.416667 0.918367
161 SNG 0.415385 0.816327
162 UMG 0.414894 0.803571
163 AMU 0.414286 0.87234
164 NAG MU2 0.41 0.818182
165 ALA NAG AH0 DAL 0.408163 0.818182
166 NAG GDL PHJ 0.40625 0.737705
167 MAN MAN NAG MAN NAG 0.404255 0.9375
168 NAG NAG BMA MAN MAN 0.404255 0.9375
169 NAG BDP 0.402597 0.916667
170 GLA GAL NAG FUC GAL GLC 0.402062 0.978261
171 NAG AMU ALA DGL 0.401961 0.833333
172 GC4 NAG 0.4 0.916667
173 GLC GLC GLC GLC 0.4 0.733333
Ligand no: 2; Ligand: GAL NDG; Similar ligands found: 325
No: Ligand ECFP6 Tc MDL keys Tc
1 NDG GAL 1 1
2 NLC 1 1
3 GAL NDG 1 1
4 GLA GAL NAG 0.847458 1
5 NAG GAL GAL 0.847458 1
6 MAN BMA NAG 0.847458 1
7 GAL NAG GAL NAG GAL NAG 0.746269 0.918367
8 NAG GAL GAL NAG 0.746269 0.9375
9 NAG FUC 0.728814 0.934783
10 G6S NAG 0.723077 0.762712
11 CBS CBS 0.716667 0.9375
12 CBS 0.716667 0.9375
13 NAG NDG 0.716667 0.9375
14 NAG GDL 0.716667 0.9375
15 8VZ 0.694915 0.918367
16 GAL BGC NAG GAL 0.691176 1
17 NAG GAL NAG 0.676471 0.9375
18 NAG BMA MAN MAN MAN MAN 0.675676 1
19 NAG NAG NAG NAG 0.671875 0.918367
20 NAG NAG NAG NAG NAG 0.671875 0.918367
21 NDG NAG NAG NAG 0.671875 0.918367
22 NDG NAG NAG 0.671875 0.918367
23 NAG NAG NDG 0.671875 0.918367
24 NAG NAG NAG NAG NDG 0.671875 0.918367
25 NAG NAG NAG NAG NAG NAG 0.671875 0.918367
26 NDG NAG NAG NDG 0.671875 0.918367
27 NAG NAG NAG 0.671875 0.918367
28 NAG NAG NAG NAG NDG NAG 0.671875 0.918367
29 NDG NAG NAG NDG NAG 0.671875 0.918367
30 CTO 0.671875 0.918367
31 NAG NAG NAG NDG 0.671875 0.918367
32 NAG NAG NAG NAG NAG NAG NAG NAG 0.671875 0.918367
33 FUC GAL NDG 0.671642 0.978261
34 DR2 0.671642 0.978261
35 NDG GAL FUC 0.671642 0.978261
36 FUL GAL NAG 0.671642 0.978261
37 FUC GAL NAG 0.671642 0.978261
38 GAL A2G 0.639344 1
39 GAL NGA 0.639344 1
40 A2G GAL 0.639344 1
41 GAL NAG MAN 0.632353 1
42 MAN NAG GAL 0.632353 1
43 MAN MAN NAG MAN NAG 0.625 0.9375
44 NAG NAG BMA MAN MAN 0.625 0.9375
45 GAL NGA A2G 0.621212 0.918367
46 UNU GAL NAG 0.608108 0.918367
47 BMA NAG MAN MAN MAN MAN MAN MAN MAN 0.60241 1
48 CTO TMX 0.597222 0.775862
49 TCG 0.597222 0.775862
50 GLC GAL NAG GAL 0.594595 1
51 FUC NDG GAL 0.585714 0.978261
52 GAL NDG FUC 0.585714 0.978261
53 GAL NAG FUC 0.585714 0.978261
54 FUC NAG GAL 0.585714 0.978261
55 HS2 0.585714 0.877551
56 NAG BMA 0.584615 0.897959
57 NAG MAN GAL BMA NDG MAN NAG GAL 0.581395 0.918367
58 NAG MAN MAN MAN NAG GAL NAG GAL 0.581395 0.918367
59 MAN BMA NAG NAG MAN NAG GAL GAL 0.581395 0.918367
60 NAG MAN GAL BMA NAG MAN NAG GAL 0.581395 0.918367
61 NAG GAL GAL NAG GAL 0.581081 0.9375
62 GLC BGC 0.578947 0.733333
63 GAL GLC 0.578947 0.733333
64 LBT 0.578947 0.733333
65 B2G 0.578947 0.733333
66 N9S 0.578947 0.733333
67 BGC BMA 0.578947 0.733333
68 MAB 0.578947 0.733333
69 LAT 0.578947 0.733333
70 MAL MAL 0.578947 0.717391
71 GAL BGC 0.578947 0.733333
72 GLA GAL 0.578947 0.733333
73 BMA BMA 0.578947 0.733333
74 CBK 0.578947 0.733333
75 GLC GAL 0.578947 0.733333
76 MAL 0.578947 0.733333
77 BGC GAL 0.578947 0.733333
78 GLA GLA 0.578947 0.733333
79 CBI 0.578947 0.733333
80 BGC GLC 0.578947 0.733333
81 BMA GAL 0.578947 0.733333
82 GAL NAG GAL 0.575342 0.957447
83 NAG NAG BMA 0.567568 0.865385
84 BGC GAL NAG GAL 0.567568 1
85 LAT NAG GAL 0.567568 1
86 GAL NAG GAL BGC 0.567568 1
87 NAG NDG BMA 0.567568 0.865385
88 U63 0.566667 0.673469
89 GAL MGC 0.5625 0.957447
90 A2G GAL NAG FUC 0.555556 0.918367
91 GCS GCS NAG 0.552632 0.9375
92 SN5 SN5 0.552239 0.803922
93 NAG MAN BMA NDG MAN NAG GAL 0.549451 0.918367
94 NGA GAL BGC 0.549296 1
95 FUC GAL NAG A2G 0.548781 0.833333
96 NAG NAG NAG NAG NAG NAG NAG 0.544304 0.833333
97 M5G 0.543478 0.9375
98 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.540984 0.733333
99 BGC BGC BGC BGC BGC BGC 0.540984 0.733333
100 CTT 0.540984 0.733333
101 BGC BGC BGC GLC 0.540984 0.733333
102 DXI 0.540984 0.733333
103 BMA BMA BMA 0.540984 0.733333
104 CE6 0.540984 0.733333
105 CE5 0.540984 0.733333
106 BGC GLC GLC GLC 0.540984 0.733333
107 BGC GLC GLC GLC GLC 0.540984 0.733333
108 CEX 0.540984 0.733333
109 MAN BMA BMA BMA BMA 0.540984 0.733333
110 GLC GLC GLC GLC GLC GLC GLC GLC 0.540984 0.733333
111 CT3 0.540984 0.733333
112 B4G 0.540984 0.733333
113 MLR 0.540984 0.733333
114 BGC GLC GLC 0.540984 0.733333
115 GLC BGC BGC BGC BGC 0.540984 0.733333
116 BMA BMA BMA BMA BMA BMA 0.540984 0.733333
117 MAN MAN BMA BMA BMA BMA 0.540984 0.733333
118 GLC GLC GLC GLC GLC 0.540984 0.733333
119 CTR 0.540984 0.733333
120 GLC GAL GAL 0.540984 0.733333
121 BMA MAN BMA 0.540984 0.733333
122 GLC BGC BGC BGC BGC BGC 0.540984 0.733333
123 CEY 0.540984 0.733333
124 MAN BMA BMA 0.540984 0.733333
125 GLA GAL GLC 0.540984 0.733333
126 MTT 0.540984 0.733333
127 GAL GAL GAL 0.540984 0.733333
128 GLC GLC BGC 0.540984 0.733333
129 CE8 0.540984 0.733333
130 MT7 0.540984 0.733333
131 BMA BMA BMA BMA BMA 0.540984 0.733333
132 GLC BGC BGC 0.540984 0.733333
133 BGC GLC GLC GLC GLC GLC GLC 0.540984 0.733333
134 GLC BGC GLC 0.540984 0.733333
135 GLC GLC GLC GLC GLC GLC GLC 0.540984 0.733333
136 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.540984 0.733333
137 GLC GLC BGC GLC GLC GLC GLC 0.540984 0.733333
138 GAL NGA GLA BGC GAL 0.538462 1
139 ASG 0.532258 0.66129
140 NAG NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.531915 0.9375
141 BEK GAL NAG 0.52381 0.789474
142 NAG GAL BGC 0.52 1
143 BM3 0.517857 0.888889
144 HSQ 0.517857 0.888889
145 NGA 0.517857 0.888889
146 A2G 0.517857 0.888889
147 NAG 0.517857 0.888889
148 NDG 0.517857 0.888889
149 NAG GAL SIA 0.51087 0.849057
150 4U1 0.51087 0.865385
151 LAT GLA 0.508475 0.733333
152 DR5 0.508197 0.73913
153 MMA MAN 0.508197 0.73913
154 GLA EGA 0.507937 0.73913
155 MAN BMA BMA BMA BMA BMA 0.507692 0.717391
156 BMA BMA BMA BMA BMA BMA MAN 0.507692 0.717391
157 NGA GLA GAL BGC 0.506329 1
158 NAG NAG BMA MAN 0.506024 0.865385
159 MAG FUC GAL 0.5 0.9375
160 GLA GAL GAL 0.5 0.733333
161 NOK GAL 0.5 0.814815
162 GAL NOK 0.5 0.814815
163 GLA GAL BGC 0.5 0.733333
164 NDG NAG 0.5 0.918367
165 FUC BGC GAL NAG GAL 0.494253 0.978261
166 NAG MAN GAL MAN MAN NAG GAL 0.494253 0.9375
167 GAL NAG FUC FUC 0.493506 0.957447
168 FUC GAL NAG FUC 0.493506 0.957447
169 FUC NDG GAL FUC 0.493506 0.957447
170 FUC NAG GAL FUC 0.493506 0.957447
171 FUC GAL NDG FUC 0.493506 0.957447
172 BDZ 0.493506 0.957447
173 GAL NDG FUC FUC 0.493506 0.957447
174 BCW 0.493506 0.957447
175 GAL LOG 0.492958 0.803571
176 LOG GAL 0.492958 0.803571
177 NAG BMA NAG MAN MAN NAG NAG 0.48913 0.918367
178 BGC BGC GLC 0.484848 0.733333
179 4U2 0.483516 0.882353
180 BGC BGC 0.483333 0.733333
181 2M4 0.483333 0.733333
182 MAN MAN 0.483333 0.733333
183 8VW 0.482353 0.849057
184 GAL NAG GAL FUC 0.481481 0.978261
185 GLA NAG GAL FUC 0.481481 0.978261
186 NGA SER GAL 0.48 0.918367
187 GAL SER A2G 0.48 0.918367
188 A2G SER GAL 0.48 0.918367
189 GAL TNR 0.48 0.918367
190 GLC GLC XYP 0.478873 0.733333
191 BMA MAN 0.47619 0.680851
192 LB2 0.47541 0.733333
193 M3M 0.47541 0.733333
194 MAN GLC 0.47541 0.733333
195 SIA GAL NAG 0.473118 0.865385
196 NAG SIA GAL 0.473118 0.865385
197 TRE 0.471698 0.733333
198 NAG NGA 0.471429 0.9375
199 NAG A2G 0.471429 0.9375
200 BGC BGC BGC BGC 0.471429 0.733333
201 BGC BGC BGC BGC BGC BGC BGC BGC 0.471429 0.733333
202 FUC BGC GAL 0.471429 0.755556
203 GAL FUC 0.46875 0.733333
204 NAG GAL FUC 0.467532 0.978261
205 DR3 0.467532 0.978261
206 FUC GAL NAG GAL BGC 0.465909 0.978261
207 MBG A2G 0.464789 0.957447
208 A2G MBG 0.464789 0.957447
209 MAN NAG 0.463768 1
210 NAG GCU NAG GCD 0.463158 0.833333
211 CGC 0.462687 0.733333
212 GAL A2G THR 0.461538 0.9
213 GLA MBG 0.459016 0.73913
214 NAG GAL 0.457143 1
215 FUC NAG 0.457143 0.956522
216 GAL NAG 0.457143 1
217 NGA GAL 0.457143 1
218 GLA GAL NAG FUC GAL GLC 0.456522 0.978261
219 GAL A2G MBN 0.455696 0.9375
220 MAN MAN BMA 0.454545 0.733333
221 MAL EDO 0.454545 0.702128
222 MAG 0.451613 0.893617
223 2F8 0.451613 0.893617
224 G2F BGC BGC BGC BGC BGC 0.450704 0.66
225 GLA GAL BGC 5VQ 0.449275 0.708333
226 BMA BMA MAN 0.446154 0.717391
227 BGC GAL NAG GAL FUC FUC 0.445652 0.957447
228 GLC GAL NAG GAL FUC FUC 0.445652 0.957447
229 FUC NAG GLA GAL 0.44186 0.957447
230 NAG GAL NGC 0.44 0.865385
231 BMA BMA GLA BMA BMA 0.44 0.733333
232 BGC BGC BGC BGC BGC 0.439394 0.733333
233 BGC BGC BGC ASO BGC BGC ASO 0.439394 0.733333
234 BGC BGC BGC GLC BGC BGC 0.439394 0.733333
235 GLC BGC BGC BGC BGC BGC BGC 0.439394 0.733333
236 GLC BGC BGC BGC 0.439394 0.733333
237 BGC BGC BGC 0.439394 0.733333
238 NPO A2G GAL 0.439024 0.714286
239 GAL A2G NPO 0.439024 0.714286
240 FUC LAT 0.438356 0.755556
241 GLC GAL FUC 0.438356 0.755556
242 BGC GAL FUC 0.438356 0.755556
243 GLC GLC GLC GLC GLC GLC 0.438356 0.733333
244 LAT FUC 0.438356 0.755556
245 FUC GAL GLC 0.438356 0.755556
246 M13 0.4375 0.73913
247 GAL GC2 0.4375 0.6875
248 MDM 0.4375 0.73913
249 GAL MBG 0.4375 0.73913
250 FUC GAL GLA 0.43662 0.755556
251 GLA GAL FUC 0.43662 0.755556
252 GAL GAL FUC 0.43662 0.755556
253 GLA GLA FUC 0.43662 0.755556
254 FUC GLA GLA 0.43662 0.755556
255 BMA MAN MAN 0.434783 0.733333
256 ABD 0.433735 0.977778
257 NAG BDP 0.432432 0.916667
258 NAG AMU 0.432099 0.9
259 NAG MUB 0.432099 0.9
260 A2G GAL BGC FUC 0.431818 0.978261
261 DOM 0.430769 0.702128
262 GLA GAL GLC NBU 0.430556 0.68
263 A2G GLA FUC 0.43038 0.978261
264 FUC GAL A2G 0.43038 0.978261
265 A2G GAL FUC 0.43038 0.978261
266 BGC GLA GAL FUC 0.43038 0.755556
267 NGA GAL FUC 0.43038 0.978261
268 FUC GLA A2G 0.43038 0.978261
269 FUC GL0 A2G 0.43038 0.978261
270 GAL GAL GLC EMB MEC 0.428571 0.75
271 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.426966 0.9375
272 1GN ACY GAL ACY 1GN BGC GAL BGC 0.426966 0.9375
273 GLC GLC GLC BGC 0.426667 0.733333
274 NAG NAG 0.426667 0.846154
275 FMO 0.426471 0.66
276 NG1 0.424242 0.75
277 GN1 0.424242 0.75
278 NAG NAG BMA BMA 0.423529 0.833333
279 CG3 A2G GAL 0.423529 0.703125
280 NAG NGO 0.423077 0.865385
281 ABL 0.42029 0.877551
282 NAG MAN BMA 0.419753 1
283 NAG MAN MAN 0.419753 1
284 FUC GAL MAG FUC 0.419753 0.9375
285 LMU 0.418919 0.641509
286 LMT 0.418919 0.641509
287 DMU 0.418919 0.641509
288 UMQ 0.418919 0.641509
289 BMA FRU 0.41791 0.64
290 FRU GAL 0.41791 0.64
291 T6P 0.415385 0.6
292 RZM 0.415385 0.72549
293 NAG NAG BMA MAN NAG 0.412371 0.849057
294 MAN MNM 0.411765 0.854167
295 GLC ACI G6D GLC 0.411111 0.8
296 GLC ACI GLD GAL 0.411111 0.8
297 NAG MBG 0.410959 0.957447
298 DLD 0.409639 0.775862
299 FUC GAL NAG GAL FUC 0.409091 0.957447
300 BMX 0.409091 0.732143
301 FUC BGC GAL NAG 0.409091 0.978261
302 16G 0.409091 0.732143
303 4QY 0.409091 0.732143
304 4RS 0.408451 0.7
305 NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.408163 0.918367
306 GLC GLC XYS 0.407895 0.755556
307 BGC BGC G2F SHG 0.407407 0.647059
308 FUC GAL NAG A2G FUC 0.406593 0.918367
309 NAG GAL FUC FUC A2G 0.406593 0.918367
310 SNG 0.40625 0.816327
311 AMU 0.405797 0.87234
312 MAN MAN MAN GLC 0.405405 0.733333
313 NOJ NAG NAG NAG 0.404762 0.818182
314 L42 0.404762 0.646154
315 NOJ NAG NAG 0.404762 0.833333
316 A2G GAL NAG FUC GAL GLC 0.40404 0.918367
317 GLC GAL NAG GAL FUC A2G 0.40404 0.918367
318 NAG NAG BMA MAN MAN MAN MAN 0.403846 0.865385
319 G2I 0.4 0.76
320 NBG 0.4 0.888889
321 OXZ BGC BGC 0.4 0.690909
322 GLO GLC GLC 0.4 0.73913
323 G3I 0.4 0.76
324 FUC NAG TA5 0.4 0.666667
325 GAL BGC BGC XYS 0.4 0.702128
Ligand no: 3; Ligand: UDP; Similar ligands found: 116
No: Ligand ECFP6 Tc MDL keys Tc
1 UDP 1 1
2 UTP 0.892308 1
3 UNP 0.8 0.970149
4 U5P 0.78125 0.984615
5 UPU 0.72973 0.940298
6 2KH 0.722222 0.970149
7 44P 0.720588 0.955882
8 URM 0.717949 0.927536
9 GUD 0.717949 0.941176
10 GDU 0.717949 0.941176
11 UFM 0.717949 0.941176
12 UPG 0.717949 0.941176
13 660 0.717949 0.927536
14 UDP UDP 0.714286 0.939394
15 UDH 0.705128 0.864865
16 UPP 0.705128 0.941176
17 UPF 0.691358 0.888889
18 U2F 0.691358 0.888889
19 UFG 0.691358 0.888889
20 UDX 0.670732 0.941176
21 UAD 0.670732 0.941176
22 3UC 0.658824 0.888889
23 USQ 0.654762 0.820513
24 UGB 0.654762 0.955224
25 UGA 0.654762 0.955224
26 G3N 0.647059 0.914286
27 UDM 0.636364 0.914286
28 URI 0.625 0.863636
29 U 0.625 0.863636
30 UD1 0.622222 0.927536
31 UD2 0.622222 0.927536
32 UDP GAL 0.611765 0.913043
33 Y6W 0.607143 0.888889
34 CDP 0.605263 0.942029
35 UD7 0.591398 0.927536
36 HP7 0.591398 0.941176
37 MJZ 0.585106 0.914286
38 IUG 0.583333 0.810127
39 12V 0.578947 0.901408
40 HWU 0.578947 0.901408
41 UD4 0.578947 0.914286
42 CJB 0.573529 0.820895
43 UDZ 0.571429 0.853333
44 DUD 0.571429 0.913043
45 UP5 0.571429 0.853333
46 U U 0.563218 0.955224
47 EPZ 0.56 0.914286
48 5GW 0.559524 0.942029
49 EPU 0.554455 0.901408
50 EEB 0.554455 0.901408
51 UA3 0.547945 0.939394
52 U3P 0.547945 0.939394
53 CH 0.546667 0.913043
54 4TC 0.544554 0.831169
55 CTP 0.54321 0.942029
56 CSV 0.531915 0.851351
57 CSQ 0.531915 0.851351
58 DUT 0.52439 0.913043
59 4GW 0.516484 0.915493
60 UMA 0.513761 0.914286
61 U4S 0.513158 0.753425
62 U2P 0.506667 0.954545
63 U2S 0.5 0.767123
64 U3S 0.5 0.753425
65 PUP 0.48913 0.913043
66 U22 0.486957 0.790123
67 U21 0.486957 0.810127
68 U20 0.486957 0.810127
69 DKX 0.486486 0.746479
70 U1S 0.482759 0.75
71 A U 0.481132 0.805195
72 2QR 0.478632 0.822785
73 5FU 0.474359 0.914286
74 8OD 0.47191 0.851351
75 C5G 0.468085 0.888889
76 7XL 0.465909 0.888889
77 U U U U 0.461538 0.940298
78 UMF 0.461538 0.857143
79 G8D 0.460674 0.855263
80 UTP U U U 0.456522 0.895522
81 2TU 0.452055 0.774648
82 4RA 0.451613 0.855263
83 C2G 0.450549 0.901408
84 DU 0.45 0.898551
85 CAR 0.45 0.927536
86 C 0.45 0.927536
87 C5P 0.45 0.927536
88 UMP 0.45 0.898551
89 UAG 0.448 0.864865
90 CDC 0.446809 0.777778
91 UD0 0.444444 0.844156
92 5BU 0.444444 0.914286
93 N3E 0.440476 0.733333
94 UC5 0.440476 0.9
95 UUA 0.438356 0.772727
96 DUP 0.431818 0.887324
97 2GW 0.431373 0.901408
98 M7G 0.430108 0.780488
99 CNU 0.428571 0.927536
100 CDM 0.427083 0.842105
101 H6Y 0.425532 0.851351
102 16B 0.421687 0.888889
103 S5P 0.419753 0.915493
104 8GT 0.419355 0.855263
105 CXY 0.418367 0.888889
106 UPA 0.418182 0.842105
107 CDP MG 0.413793 0.849315
108 U2G 0.410714 0.822785
109 U A A U 0.409836 0.842105
110 UML 0.408759 0.810127
111 UP6 0.407407 0.871429
112 M7M 0.40625 0.771084
113 PMP UD1 0.404762 0.794872
114 1GW 0.40367 0.864865
115 BMP 0.402439 0.970149
116 APU 0.401786 0.828947
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1V84; Ligand: UDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1v84.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1V84; Ligand: UDP; Similar sites found: 28
This union binding pocket(no: 2) in the query (biounit: 1v84.bio1) has 15 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1Q8S MAN MMA 0.007778 0.41294 1.19048
2 1Q8Q MAN MMA 0.008807 0.40879 1.19048
3 2PHR MAN MAN 0.01231 0.40327 1.19048
4 2GND MAN MMA 0.01335 0.40155 1.19048
5 2PHW MAN MAN 0.01393 0.40064 1.19048
6 1TZD ADP 0.01528 0.40009 1.97628
7 3K8D CTP 0.005134 0.4243 2.37154
8 3W7T BMA 0.01517 0.40901 2.37154
9 1LF9 ACR 0.01813 0.40153 2.37154
10 1QGQ UDP 0.003801 0.42306 2.7668
11 3L6R MLI 0.0006993 0.41454 2.7668
12 2BVL UDP 0.02109 0.40661 2.7668
13 2BVL GLC 0.02109 0.40661 2.7668
14 4IRP UDP 0.0008082 0.46567 3.18725
15 3ZF8 GDP 0.007848 0.41063 3.55731
16 2QGI UDP 0.006673 0.41697 3.62903
17 4M4K GDU 0.006095 0.43059 3.83275
18 2D7I UDP 0.0007511 0.43907 3.95257
19 1OMZ UD2 0.000501 0.48277 4.34783
20 2Y6P CTP 0.004402 0.41292 4.70085
21 3A5Z KAA 0.02033 0.41424 6.71937
22 4A01 2PN 0.01115 0.40078 7.90514
23 5TZJ UD1 0.00001331 0.40752 10.2767
24 2FKA BEF 0.01981 0.40039 10.8527
25 5AJP UDP 0.00846 0.41588 11.8577
26 2J0B UDP 0.0008578 0.40272 13.4387
27 2APC UDM 0.004472 0.43549 19.3676
28 2FFU UDP 0.002232 0.40216 30.7692
Pocket No.: 3; Query (leader) PDB : 1V84; Ligand: GAL NAG; Similar sites found: 1
This union binding pocket(no: 3) in the query (biounit: 1v84.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5ML3 DL3 0.03631 0.41254 5.36913
Pocket No.: 4; Query (leader) PDB : 1V84; Ligand: GAL NDG; Similar sites found: 6
This union binding pocket(no: 4) in the query (biounit: 1v84.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3RIY NAD 0.02669 0.41338 3.95257
2 1I9Z 2IP 0.008433 0.40704 4.74308
3 3DAG FEG 0.03743 0.40051 5.92885
4 4I8P NAD 0.04456 0.40464 6.32411
5 5EYP GDP 0.02722 0.41047 19.7628
6 5EYK 5U5 0.02696 0.40808 27.1186
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