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Receptor
PDB id Resolution Class Description Source Keywords
1VJT 2.5 Å EC: 3.2.1.139 CRYSTAL STRUCTURE OF ALPHA-GLUCOSIDASE (TM0752) FROM THERMOT MARITIMA AT 2.50 A RESOLUTION THERMOTOGA MARITIMA TM0752 ALPHA-GLUCOSIDASE STRUCTURAL GENOMICS JCSG PSI PSTRUCTURE INITIATIVE JOINT CENTER FOR STRUCTURAL GENOMICSHYDROLASE
Ref.: CRYSTAL STRUCTURE OF ALPHA-GLUCOSIDASE (TM0752) FRO THERMOTOGA MARITIMA AT 2.50 A RESOLUTION TO BE PUBLISHED
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAD A:500;
Valid;
none;
submit data
663.425 C21 H27 N7 O14 P2 c1cc(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1VJT 2.5 Å EC: 3.2.1.139 CRYSTAL STRUCTURE OF ALPHA-GLUCOSIDASE (TM0752) FROM THERMOT MARITIMA AT 2.50 A RESOLUTION THERMOTOGA MARITIMA TM0752 ALPHA-GLUCOSIDASE STRUCTURAL GENOMICS JCSG PSI PSTRUCTURE INITIATIVE JOINT CENTER FOR STRUCTURAL GENOMICSHYDROLASE
Ref.: CRYSTAL STRUCTURE OF ALPHA-GLUCOSIDASE (TM0752) FRO THERMOTOGA MARITIMA AT 2.50 A RESOLUTION TO BE PUBLISHED
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 1VJT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 1VJT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 1OBB - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
2 1VJT - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAD; Similar ligands found: 230
No: Ligand ECFP6 Tc MDL keys Tc
1 A3D 0.872727 0.986111
2 NHD 0.821429 0.972222
3 NAP 0.811966 0.986111
4 NFD 0.791304 0.946667
5 NXX 0.765766 0.972603
6 DND 0.765766 0.972603
7 AMP NAD 0.74359 0.972222
8 ZID 0.737705 0.986111
9 NAQ 0.729508 0.934211
10 NAE 0.721311 0.959459
11 NA0 0.712 0.972603
12 TAP 0.704 0.921053
13 NDE 0.689922 0.972603
14 NAJ 0.683333 0.972222
15 NDC 0.679389 0.934211
16 NDO 0.674603 0.958904
17 N01 0.656 0.972222
18 CNA 0.642276 0.972603
19 NBP 0.621212 0.922078
20 8ID 0.609756 0.922078
21 A2D 0.576923 0.958333
22 ADP 0.575472 0.931507
23 NGD 0.574803 0.922078
24 BA3 0.566038 0.958333
25 M33 0.564815 0.918919
26 ADP PO3 0.563636 0.957747
27 B4P 0.560748 0.958333
28 AP5 0.560748 0.958333
29 AN2 0.555556 0.918919
30 AT4 0.555556 0.894737
31 GAP 0.553571 0.932432
32 OOB 0.551724 0.972222
33 CA0 0.550459 0.932432
34 9JJ 0.546053 0.898734
35 HEJ 0.545455 0.931507
36 ACP 0.545455 0.906667
37 ATP 0.545455 0.931507
38 DQV 0.544 0.972222
39 ADP ALF 0.54386 0.883117
40 ALF ADP 0.54386 0.883117
41 DAL AMP 0.543103 0.945205
42 APR 0.540541 0.931507
43 AQP 0.540541 0.931507
44 AR6 0.540541 0.931507
45 5FA 0.540541 0.931507
46 ADP VO4 0.53913 0.945205
47 VO4 ADP 0.53913 0.945205
48 AD9 0.535714 0.906667
49 SAP 0.535714 0.883117
50 AGS 0.535714 0.883117
51 WAQ 0.533333 0.896104
52 ABM 0.53271 0.905405
53 DLL 0.529412 0.972222
54 00A 0.529412 0.921053
55 ACQ 0.526316 0.906667
56 NJP 0.526316 0.959459
57 ANP 0.526316 0.906667
58 OAD 0.525 0.932432
59 ADX 0.522523 0.839506
60 5AL 0.521739 0.945205
61 A1R 0.521008 0.871795
62 9SN 0.520325 0.909091
63 A 0.518868 0.930556
64 AMP 0.518868 0.930556
65 50T 0.517857 0.893333
66 ATF 0.517241 0.894737
67 1ZZ 0.516393 0.851852
68 3OD 0.516393 0.932432
69 SON 0.513514 0.92
70 PRX 0.513274 0.881579
71 6YZ 0.512821 0.906667
72 SRP 0.512821 0.92
73 9X8 0.512397 0.883117
74 ADP BMA 0.512397 0.932432
75 3UK 0.512397 0.958904
76 MYR AMP 0.512195 0.851852
77 NAJ PZO 0.510949 0.909091
78 NMN 0.509434 0.875
79 A3R 0.508333 0.871795
80 B5V 0.508197 0.945946
81 AMP DBH 0.507937 0.906667
82 A22 0.504202 0.945205
83 ATP A A A 0.504 0.971831
84 B5M 0.504 0.933333
85 FA5 0.504 0.945946
86 8QN 0.5 0.945205
87 NAX 0.496183 0.886076
88 TYR AMP 0.496063 0.933333
89 PR8 0.495935 0.8625
90 AMO 0.495868 0.92
91 ADQ 0.495868 0.932432
92 4AD 0.495868 0.933333
93 PAJ 0.495868 0.873418
94 A12 0.495495 0.894737
95 AP2 0.495495 0.894737
96 AHZ 0.492308 0.851852
97 YAP 0.492063 0.933333
98 FYA 0.491935 0.918919
99 AHX 0.491803 0.884615
100 4UU 0.488372 0.933333
101 5SV 0.487603 0.8375
102 TAT 0.487179 0.894737
103 T99 0.487179 0.894737
104 APC 0.486957 0.894737
105 SRA 0.486239 0.881579
106 6V0 0.484848 0.909091
107 NAI 0.484848 0.921053
108 GTA 0.484615 0.898734
109 A A 0.483871 0.958333
110 LAD 0.483871 0.873418
111 AU1 0.482456 0.906667
112 F2R 0.481752 0.831325
113 OMR 0.481203 0.841463
114 TXE 0.481203 0.921053
115 AF3 ADP 3PG 0.481203 0.873418
116 LAQ 0.480916 0.851852
117 G3A 0.48062 0.909091
118 B5Y 0.480315 0.933333
119 NB8 0.48 0.884615
120 TXA 0.48 0.92
121 BIS 0.48 0.871795
122 ME8 0.48 0.851852
123 PTJ 0.48 0.884615
124 139 0.477941 0.886076
125 LPA AMP 0.477273 0.851852
126 AFH 0.476923 0.873418
127 AR6 AR6 0.476923 0.958333
128 G5P 0.476923 0.909091
129 ARG AMP 0.476923 0.841463
130 25L 0.47619 0.945205
131 NAJ PYZ 0.475524 0.864198
132 25A 0.47541 0.958333
133 9ZA 0.47541 0.896104
134 9ZD 0.47541 0.896104
135 DZD 0.47482 0.897436
136 TXD 0.473684 0.921053
137 4UV 0.472868 0.933333
138 TYM 0.470149 0.945946
139 RBY 0.470085 0.894737
140 ADV 0.470085 0.894737
141 4TA 0.467626 0.864198
142 48N 0.466165 0.884615
143 XAH 0.465116 0.851852
144 4UW 0.462687 0.897436
145 M24 0.461538 0.886076
146 80F 0.460993 0.853659
147 IOT 0.459854 0.821429
148 T5A 0.456522 0.853659
149 EAD 0.455782 0.886076
150 MAP 0.455285 0.883117
151 GA7 0.454545 0.894737
152 BT5 0.453901 0.821429
153 A4P 0.452555 0.833333
154 UP5 0.451852 0.933333
155 PAP 0.445378 0.917808
156 4TC 0.445255 0.909091
157 AP0 0.445255 0.884615
158 YLP 0.444444 0.831325
159 P1H 0.443709 0.864198
160 AOC 0.442478 0.810811
161 Z5A 0.439189 0.833333
162 LMS 0.4375 0.817073
163 2A5 0.436975 0.857143
164 A G 0.43662 0.921053
165 G A A A 0.43662 0.909091
166 COD 0.43662 0.802326
167 ADJ 0.435714 0.841463
168 YLB 0.434783 0.831325
169 YLC 0.434783 0.851852
170 U A G G 0.433566 0.921053
171 ATR 0.433333 0.90411
172 7MD 0.432836 0.851852
173 8X1 0.432 0.764045
174 G5A 0.429752 0.790698
175 PO4 PO4 A A A A PO4 0.429688 0.943662
176 TAD 0.42963 0.873418
177 5AS 0.42735 0.770115
178 BTX 0.426573 0.831325
179 YLA 0.425532 0.831325
180 DSZ 0.425197 0.790698
181 NCN 0.424779 0.805556
182 UPA 0.42446 0.921053
183 8PZ 0.424242 0.811765
184 VMS 0.424 0.8
185 54H 0.424 0.8
186 9K8 0.423077 0.744444
187 N0B 0.422819 0.853659
188 6AD 0.422764 0.85
189 AYB 0.422535 0.821429
190 7D3 0.422414 0.844156
191 YLY 0.421769 0.821429
192 TSB 0.420635 0.809524
193 ODP 0.41958 0.922078
194 AV2 0.419355 0.855263
195 FB0 0.419355 0.775281
196 A5A 0.419355 0.819277
197 NNR 0.419048 0.739726
198 A A A 0.418605 0.918919
199 U A 0.417808 0.946667
200 649 0.417266 0.775281
201 NMN AMP PO4 0.416667 0.933333
202 SSA 0.416 0.790698
203 P5A 0.415385 0.755556
204 LSS 0.414062 0.772727
205 A2R 0.412698 0.918919
206 52H 0.412698 0.790698
207 JB6 0.412214 0.896104
208 5N5 0.411215 0.783784
209 YSA 0.410448 0.811765
210 53H 0.409449 0.790698
211 5CA 0.409449 0.790698
212 ITT 0.408333 0.878378
213 7D4 0.408333 0.844156
214 NA7 0.407692 0.894737
215 LEU LMS 0.407692 0.784091
216 5CD 0.407407 0.794521
217 0WD 0.406897 0.909091
218 A3P 0.40678 0.930556
219 HFD 0.406504 0.883117
220 AVV 0.40625 0.860759
221 RAB 0.40566 0.808219
222 XYA 0.40566 0.808219
223 ADN 0.40566 0.808219
224 FDA 0.405063 0.823529
225 GSU 0.40458 0.790698
226 7MC 0.404255 0.831325
227 NSS 0.403101 0.811765
228 6FA 0.402516 0.853659
229 PPS 0.4 0.817073
230 NVA LMS 0.4 0.784091
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1VJT; Ligand: NAD; Similar sites found with APoc: 780
This union binding pocket(no: 1) in the query (biounit: 1vjt.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 1DJN ADP 0.828157
2 2IXB A2G 0.900901
3 2IXB NAD 0.900901
4 2NVK NAP 1.0352
5 5Y77 FAD 1.05708
6 4FWE FAD 1.24224
7 2VVM FAD 1.24224
8 4MIG G3F 1.24224
9 2VVL FAD 1.24224
10 1BZL FAD 1.24224
11 1BZL GCG 1.24224
12 6FP4 FAD 1.24224
13 6FP4 E1T 1.24224
14 4XQC 13D 1.26316
15 4XQC NAD 1.26316
16 4JDR FAD 1.26582
17 5GUD NDP 1.27389
18 1ZK7 FAD 1.2848
19 4ZGS NAD 1.29534
20 2Q1S NAI 1.32626
21 3Q3C NAD 1.33779
22 3T31 FAD 1.373
23 3T31 DCQ 1.373
24 1BW9 NAD 1.40449
25 1BXG NAD 1.40449
26 1C1X NAD 1.40845
27 2R2N KYN 1.41176
28 5O9F 9ON 1.42045
29 5O9F NAD 1.42045
30 1VKO NAD 1.44928
31 2B4R NAD 1.44928
32 2B4R AES 1.44928
33 1COY FAD 1.44928
34 4C3Y FAD 1.44928
35 4C3Y ANB 1.44928
36 6F97 FAD 1.44928
37 1COY AND 1.44928
38 5HSA FAS 1.44928
39 1SC6 NAD 1.48515
40 1V6A TRE 1.50602
41 5MZI FYK 1.51844
42 5MZI FAD 1.51844
43 1LDN NAD 1.58228
44 5DF1 NAP 1.63043
45 5DF1 58X 1.63043
46 4RVG TYD 1.64319
47 4RVG SAM 1.64319
48 2WPF WPF 1.65631
49 2WPF FAD 1.65631
50 5TS5 FAD 1.65631
51 2JHP SAH 1.65631
52 1V59 FAD 1.67364
53 1V59 NAD 1.67364
54 4X9M FAD 1.67464
55 2E5V FAD 1.69492
56 3L9W GSH 1.69492
57 3L9W AMP 1.69492
58 5UR0 NAD 1.7192
59 5XWC 2IT 1.73913
60 5XWC NAP 1.73913
61 5XWC 8GL 1.73913
62 2GSD NAD 1.74129
63 2GN4 UD1 1.74419
64 2GN4 NDP 1.74419
65 5GSN FAD 1.766
66 5GSN NAP 1.766
67 2YG3 FAD 1.766
68 5GSN MMZ 1.766
69 4M73 M72 1.78042
70 4M73 SAH 1.78042
71 1J49 NAD 1.8018
72 6BII NAP 1.8018
73 1BDB NAD 1.80505
74 5NUE NAD 1.80723
75 5NUF NAD 1.80723
76 1J0X NAD 1.80723
77 5Z75 NAD 1.83486
78 3HB5 NAP 1.83486
79 1E3I CXF 1.8617
80 1UWK NAD 1.86335
81 1UWK URO 1.86335
82 1NAA ABL 1.86335
83 1NAA 6FA 1.86335
84 3E1T FAD 1.86335
85 5MBX SP5 1.86335
86 5MBX FAD 1.86335
87 2GV8 FAD 1.86335
88 1VQW FAD 1.86335
89 6H3O FAD 1.86335
90 2GVC FAD 1.86335
91 2GV8 NDP 1.86335
92 2GMH FAD 1.86335
93 1Z45 NAD 1.86335
94 1SQF SAM 1.8648
95 3CGB FAD 1.875
96 2B9W FAD 1.88679
97 4BJZ FAD 1.88679
98 4BJZ P3A 1.88679
99 5G3U FDA 1.89125
100 5G3U ITW 1.89125
101 2CDC XYP 1.91257
102 2CDC NAP 1.91257
103 2CDC XYS 1.91257
104 1HYE NAP 1.91693
105 2F5X ASP 1.92308
106 5TUF FAD 1.95599
107 5TUF TDC 1.95599
108 5BVA FAD 1.95599
109 5TUK FAD 1.96078
110 2RGJ FAD 1.99005
111 5JCM FAD 1.99557
112 5JCM NAD 1.99557
113 5JCM ISD 1.99557
114 5BUK FAD 2
115 1KOL NAD 2.01005
116 5Y8L NAD 2.0339
117 5Y8L HUI 2.0339
118 5U19 827 2.05279
119 5U19 SAH 2.05279
120 1ELI PYC 2.05656
121 1GZ4 ATP 2.07039
122 1QO8 FAD 2.07039
123 3GD4 FAD 2.07039
124 5KOX RFP 2.07039
125 5KOX FAD 2.07039
126 4D04 NAP 2.07039
127 4D04 FAD 2.07039
128 4BV6 FAD 2.07039
129 3GD4 NAD 2.07039
130 4REP FAD 2.07039
131 2RGH FAD 2.07039
132 2CVZ NDP 2.07612
133 1WP4 NDP 2.07612
134 3CGD FAD 2.08333
135 3CGD COA 2.08333
136 1F8G NAD 2.08333
137 3CGD NAD 2.08333
138 3FWN ATR 2.08333
139 3H4V NAP 2.08333
140 3H4V DVP 2.08333
141 1Q1R FAD 2.08817
142 1TPY SAH 2.09059
143 2IVD FAD 2.09205
144 2IZ1 ATR 2.1097
145 3GU3 SAH 2.11268
146 2VYN NAD 2.1148
147 4E13 NAD 2.12014
148 1GAD NAD 2.12121
149 4YT4 FE9 2.13333
150 3ZV6 4HB 2.13523
151 3ZV6 NAD 2.13523
152 2CUL FAD 2.15517
153 1X87 NAD 2.17786
154 5BJX UDP 2.18579
155 5BJX NAD 2.18579
156 2FK8 SAM 2.20126
157 2YVF NAD 2.20588
158 5VKT NAP 2.20994
159 4USQ FAD 2.21607
160 5JAQ NAI 2.21675
161 3WMX NAD 2.23464
162 2VZ0 D64 2.23881
163 2VZ0 NAP 2.23881
164 2Q0L NAP 2.2508
165 2Q0L FAD 2.2508
166 6FHO FAD 2.25564
167 3G5S FAD 2.25734
168 3HAD NAD 2.27273
169 5KKA 6V0 2.27743
170 3FPZ AHZ 2.27743
171 5OC1 FAD 2.27743
172 3IHG FAD 2.27743
173 5BRT CH9 2.27743
174 2R4J 13P 2.27743
175 2R4J FAD 2.27743
176 2WET FAD 2.27743
177 3WQQ NDP 2.27743
178 3WQQ IB3 2.27743
179 4D7E FAD 2.27743
180 3NB0 G6P 2.27743
181 1YKJ FAD 2.28426
182 1YKJ PHB 2.28426
183 4XYB NDP 2.30179
184 4YUW 4JU 2.30263
185 4YUW S4M 2.30263
186 3JWH SAH 2.30415
187 3KLJ FAD 2.33766
188 3WLE NAD 2.34604
189 5OJL TXP 2.34899
190 4NTC FAD 2.38806
191 6AIN FAD 2.39234
192 4RQU NAD 2.4
193 5T67 JHZ 2.40385
194 5T67 SAH 2.40385
195 1U3U NAD 2.40642
196 1U3U BNF 2.40642
197 3LZW NAP 2.40964
198 3LZW FAD 2.40964
199 2IID FAD 2.40964
200 2IID PHE 2.40964
201 5FJN BE2 2.41228
202 5FJN FAD 2.41228
203 2GCG NDP 2.42424
204 1B8U OAA 2.43161
205 1B8U NAD 2.43161
206 1FEC FAD 2.44898
207 1GQ2 NAP 2.48447
208 2RGO FAD 2.48447
209 1PS9 FAD 2.48447
210 1PS9 NAP 2.48447
211 4HA6 FAD 2.48447
212 3UOY FAD 2.48447
213 3UOY NAP 2.48447
214 5U8U FAD 2.4948
215 5GWT SIN 2.51799
216 5GWT NAD 2.51799
217 3LAD FAD 2.52101
218 2X6T NAP 2.52101
219 5BSH PRO 2.52708
220 5TC4 NAD 2.53165
221 1MXH DHF 2.53623
222 1MXH NAP 2.53623
223 1H82 GZZ 2.54237
224 1H82 FAD 2.54237
225 2YGM GLA NAG GAL FUC 2.54237
226 3GGO NAI 2.54777
227 3GGO ENO 2.54777
228 4UP3 NDP 2.54777
229 4AP3 NAP 2.55009
230 4AP3 FAD 2.55009
231 1JG3 ADN 2.55319
232 1KYQ NAD 2.55474
233 1SB8 NAD 2.55682
234 1SB8 UD2 2.55682
235 3O9Z NAD 2.5641
236 3O9Z AKG 2.5641
237 5E9W SAH 2.5641
238 5T9F TYR 2.58303
239 3TWO NDP 2.58621
240 5DM1 SAH 2.62172
241 5DM1 5D7 2.62172
242 1LLU NAD 2.63158
243 5DLY 5D7 2.63158
244 5DLY SAH 2.63158
245 4NTD FAD 2.64706
246 3ITJ CIT 2.66272
247 3ITJ FAD 2.66272
248 3V1Y NAD 2.67062
249 1CDO NAD 2.6738
250 1D4D FAD 2.69151
251 1O0S NAI 2.69151
252 1REO FAD 2.69151
253 2Q1W NAD 2.69151
254 2DFV NAD 2.69151
255 4B63 NAP 2.69151
256 4B63 ORN 2.69151
257 4B63 FAD 2.69151
258 4KOA NDP 2.7027
259 6BQ6 TER 2.71903
260 1CER NAD 2.71903
261 6F3N ADN 2.75424
262 6F3N NAD 2.75424
263 4BLW AMP 2.76817
264 4TQG NDP 2.78638
265 2QRK AMP 2.79188
266 1HKU NAD 2.7933
267 5UAV TFB 2.79503
268 5UAV NDP 2.79503
269 2PT9 2MH 2.80374
270 2PT9 S4M 2.80374
271 1GZ6 NAI 2.82132
272 6F3M NAD 2.82609
273 3A4V NAD 2.83912
274 3A4V PYR 2.83912
275 1PJS NAD 2.84464
276 2G5C NAD 2.84698
277 3GMB FAD 2.89157
278 2ZJ1 NAD 2.89855
279 2ZJ1 ARJ 2.89855
280 5JWC FAD 2.89855
281 1RSG FAD 2.89855
282 3GFB NAD 2.89855
283 3ICS FAD 2.89855
284 3ICS ADP 2.89855
285 3ICR FAD 2.89855
286 3AYI FAD 2.89855
287 3AYI HCI 2.89855
288 3ICT ADP 2.89855
289 2ZXI FAD 2.89855
290 4YNU FAD 2.89855
291 3ICT FAD 2.89855
292 5DNK SAH 2.89855
293 1KNR FAD 2.89855
294 4YNU LGC 2.89855
295 1Q8A HCS 2.89855
296 1EQ2 NAP 2.90323
297 5E1M PRO PRO LYS ARG ILE ALA 2.90456
298 5E1M SAH 2.90456
299 1UXG NAD 2.91262
300 1UXG FUM 2.91262
301 5I39 FAD 2.94118
302 4MP8 MLI 2.94985
303 4MP8 NAD 2.94985
304 2HXW FLC 2.95359
305 1YQZ FAD 2.96804
306 6AA8 NAD 2.98013
307 4K5S PM0 2.98507
308 4K5S FAD 2.98507
309 1X14 NAD 2.99252
310 4Z0H NAD 2.99401
311 3KB6 NAD 2.99401
312 2DBZ NAP 2.99401
313 1GR0 NAD 2.99728
314 2Y6Q FAD 3.01508
315 2Y6Q I7T 3.01508
316 3OJO NAD 3.01624
317 3S5W FAD 3.02376
318 3S5W NAP 3.02376
319 1JQ3 AAT 3.04054
320 4KP7 NAP 3.0445
321 4KP7 1UQ 3.0445
322 2C7G FAD 3.07018
323 2C7G ODP 3.07018
324 3DAG FEG 3.07263
325 3H8V ATP 3.08219
326 1PL6 NAD 3.08989
327 1PL6 572 3.08989
328 1YY5 FAD 3.10559
329 1Q0H FOM 3.10559
330 1Q0H NDP 3.10559
331 1MO9 KPC 3.10559
332 1WDK NAD 3.10559
333 1MO9 FAD 3.10559
334 2PZM UDP 3.10559
335 2PZM NAD 3.10559
336 3QVP FAD 3.10559
337 4NBW NAD 3.11284
338 3VZS NAP 3.11284
339 3VZS CAA 3.11284
340 1NE7 16G 3.11419
341 3CTY FAD 3.1348
342 3NYC FAD 3.14961
343 3NYC IAR 3.14961
344 4FN4 NAD 3.14961
345 2NXE SAM 3.14961
346 6GAR FAD 3.15186
347 6ARJ SAH 3.15186
348 6ARJ BW4 3.15186
349 4W6Z 8ID 3.17003
350 4EMI FAD 3.17073
351 2I7C AAT 3.18021
352 2VHW NAI 3.18302
353 2JHF NAD 3.20856
354 3WV8 ATP 3.21101
355 1GUZ NAD 3.22581
356 1GV0 NAD 3.22581
357 4GUS FAD 3.22581
358 4GUT FAD 3.22581
359 4HSU FAD 3.22581
360 4JNA FAD 3.23529
361 2RAB FAD 3.23974
362 2RAB NAD 3.23974
363 2VT3 ATP 3.25581
364 3NGL NAP 3.26087
365 2B4Q NAP 3.26087
366 2C29 DQH 3.2641
367 2C29 NAP 3.2641
368 4O0L NDP 3.27273
369 5AHO TLA 3.27381
370 5AOV NAP 3.27381
371 4XFR CIT 3.27869
372 5DN9 NAD 3.2967
373 5EB4 FAD 3.31263
374 3NTA FAD 3.31263
375 4IV9 FAD 3.31263
376 4G5H UD7 3.31263
377 3NTD FAD 3.31263
378 3NT6 FAD 3.31263
379 5EZ7 FAD 3.31633
380 1NYT NAP 3.32103
381 1SAY PYR 3.3241
382 3CIF G3H 3.34262
383 3CIF NAD 3.34262
384 1LDM NAD 3.34347
385 4RSL FAD 3.37079
386 2VTD LKM 3.37079
387 5KVS 6XR 3.37662
388 5KVS NAP 3.37662
389 1ZEM NAD 3.43511
390 3B1F NAD 3.44828
391 3H9E NAD 3.46821
392 5WUW NAP 3.48432
393 4TXI FAD 3.51967
394 1GET FAD 3.51967
395 1GET NAP 3.51967
396 1YQD NAP 3.55191
397 2GZ3 NAP 3.55191
398 3SQP FAD 3.55649
399 4L8V NAP 3.56083
400 3ABI NAD 3.56164
401 2NPX NAD 3.57942
402 2NPX FAD 3.57942
403 4MDH NAD 3.59281
404 5MDH NAD 3.6036
405 4YMJ 4EJ 3.61842
406 3HVJ 705 3.61991
407 5J5Z FAD 3.62903
408 1YJQ NAP 3.63036
409 2B5W NAP 3.64146
410 1L7E NAI 3.64583
411 2CVQ NDP 3.66972
412 1MV8 NAD 3.66972
413 4XUC 43G 3.66972
414 4XUC SAM 3.66972
415 1MUU NAD 3.66972
416 1X7D ORN 3.71429
417 1X7D NAD 3.71429
418 1GTE FAD 3.72671
419 4YKG FAD 3.72671
420 1DLJ NAI 3.73134
421 1DLJ UGA 3.73134
422 1ORR NAD 3.7464
423 1R37 NAD 3.7464
424 1V8B NAD 3.75783
425 2HQM FAD 3.75783
426 1JQD SAH 3.76712
427 2AOT SAH 3.76712
428 5YU3 NAD 3.77907
429 5YU3 PRO 3.77907
430 5TWB FAD 3.77907
431 5OCM NAP 3.78007
432 3AXB FAD 3.79464
433 5CAE COA 3.79747
434 5CAE SIN 3.79747
435 1NPD NAD 3.81944
436 1U1I NAD 3.82653
437 4ZRN NAD 3.84615
438 1NV8 SAM 3.87324
439 1NV8 MEQ 3.87324
440 3EGI ADP 3.8835
441 1EJ0 SAM 3.88889
442 4D42 W0I 3.90071
443 4D42 NAP 3.90071
444 5L8N 6RQ 3.90625
445 3MB5 SAM 3.92157
446 5FI3 NAP 3.92157
447 1RYI GOA 3.9267
448 1RYI FAD 3.9267
449 5ZI2 ADP 3.93375
450 5ZI2 NAD 3.93375
451 2DKH FAD 3.93375
452 2F6D ACR 3.93375
453 3ETG NDP 3.93375
454 3ETG GTP 3.93375
455 3ETG GLU 3.93375
456 1JNR FAD 3.93375
457 1GPE FAD 3.93375
458 2FR1 NDP 3.93375
459 6EL3 NAP 3.93701
460 5KVA SAM 3.95683
461 5Y1G NAD 3.96341
462 5Y1G AKB 3.96341
463 2JK0 ASP 4
464 1P0F NAP 4.02145
465 2BRY FAD 4.02414
466 1Y8Q ATP 4.04624
467 3GEG NAD 4.04858
468 3GRU AMP 4.0678
469 6F7L FAD 4.0724
470 3LXD FAD 4.09639
471 5A1T NAI 4.10557
472 5A1T OXM 4.10557
473 1H2B NAJ 4.14079
474 4E5N NAD 4.14079
475 3ZNN FAD 4.14079
476 3ZNN 4WL 4.14079
477 4U8P UDP 4.14079
478 4U8P FDA 4.14079
479 2V3V MGD 4.14079
480 3AB1 FAD 4.16667
481 2NU8 COA 4.16667
482 4RDI ATP 4.16667
483 4RDH AMP 4.16667
484 1JPA ANP 4.16667
485 1I36 NAP 4.16667
486 2DTX BMA 4.16667
487 3K7M FAD 4.17633
488 5LD5 NAD 4.18994
489 6CEP NAD 4.19162
490 6CEP OXM 4.19162
491 2DT9 THR 4.19162
492 4OOE FOM 4.20792
493 4OOE NDP 4.20792
494 1HDG NAD 4.21687
495 4R6W PC 4.26357
496 4R6W SAH 4.26357
497 4OBW SAM 4.28016
498 2Q7V FAD 4.30769
499 1N2X SAM 4.31894
500 5N6C NAD 4.33333
501 4J36 FAD 4.33735
502 4J36 1HR 4.33735
503 4HXY NDP 4.3379
504 1OMO NAD 4.34783
505 5Z20 NAI 4.34783
506 4YRY FAD 4.34783
507 3X0V FAD 4.34783
508 4D79 ATP 4.34783
509 1P77 ATR 4.41176
510 3G89 SAM 4.41767
511 5ZYN FAD 4.4586
512 4ZCC FAD 4.46429
513 4ZCC NAI 4.46429
514 2GDZ NAD 4.49438
515 3D3W NAP 4.5082
516 1PR9 NAP 4.5082
517 3VPH NAD 4.51613
518 3VPH OXM 4.51613
519 1P1C SAH 4.52261
520 5Z7B VNL 4.54545
521 4EUE NAI 4.54545
522 1PN0 FAD 4.55487
523 1PN0 IPH 4.55487
524 3UCL FAD 4.55487
525 3UCL CYH 4.55487
526 3UCL NAP 4.55487
527 5VN0 NAI 4.55487
528 5VN0 FAD 4.55487
529 1OC2 TDX 4.5977
530 1U7T TDT 4.5977
531 1U7T NAD 4.5977
532 1XHC FAD 4.63215
533 5JE8 NAD 4.63576
534 1XCL SAH 4.68085
535 3OA2 NAD 4.71698
536 4TM3 FAD 4.74041
537 5U5G NAP 4.74576
538 1Q9I FAD 4.7619
539 1Q9I TEO 4.7619
540 6ER9 FAD 4.7619
541 6ER9 NAP 4.7619
542 2AQJ TRP 4.7619
543 2AQJ FAD 4.7619
544 1KEW NAD 4.7619
545 1KEW TYD 4.7619
546 5JY6 NAD 4.77528
547 5M67 ADE 4.80167
548 5M67 NAD 4.80167
549 5M67 3D1 4.80167
550 3KO8 NAD 4.80769
551 5D4V SAH 4.85075
552 4CNK FAD 4.85933
553 5X68 FAD 4.85933
554 5Z2L NDP 4.89796
555 5Z2F NAP 4.90566
556 5H4S RAM 4.92958
557 4B4U NAP 4.9505
558 1JXN MFU 4.95868
559 2CDU FAD 4.96894
560 2CDU ADP 4.96894
561 3QJ4 FAD 4.97076
562 2O4C NAD 5
563 5YAP NAI 5
564 5YAP 8S0 5
565 3SSO SAH 5.01193
566 1A5Z NAD 5.01567
567 3FPF TNA 5.03356
568 3FPF MTA 5.03356
569 1D1T NAD 5.09383
570 3H5N ATP 5.09915
571 6A3J SOE 5.12195
572 6A3J NAI 5.12195
573 4D3F NAP 5.16129
574 1EK6 NAI 5.17241
575 1EK6 UPG 5.17241
576 4XZ3 ACP 5.17241
577 5KMS NAD 5.17598
578 5K4W NAI 5.17598
579 5K4W THR 5.17598
580 3ORF NAD 5.17928
581 4YAG NAI 5.19031
582 4JJF N2I 5.23256
583 4JJF FE9 5.23256
584 4URF NAD 5.24194
585 1IY8 NAD 5.24345
586 4J56 FAD 5.26316
587 5ZZ6 ADP 5.28846
588 5ZZ6 NAD 5.28846
589 3B1J NAD 5.30973
590 2AG8 NAP 5.32319
591 1EZ4 NAD 5.34591
592 2FZW NAD 5.36193
593 4XB2 NDP 5.37313
594 4XB2 HSE 5.37313
595 1DSS NAD 5.40541
596 6DUB SAH 5.40541
597 2JJQ SAH 5.41176
598 5EOW FAD 5.4321
599 2YY7 NAD 5.44872
600 3DXY SAM 5.50459
601 3C6K SPD 5.51181
602 3C6K MTA 5.51181
603 4USR FAD 5.54017
604 3OZ2 FAD 5.54156
605 3OND ADN 5.59006
606 3OND NAD 5.59006
607 4EMJ FAD 5.60748
608 5JCA NDP 5.6338
609 2PV7 NAD 5.7047
610 1LSS NAD 5.71429
611 4CQM NAP 5.74713
612 5SXS NIZ 5.7971
613 2C5A NAD 5.80475
614 2C5A GDC 5.80475
615 5OFW 9TW 5.8296
616 3FXU TSU 5.90164
617 1F8F NAD 5.92992
618 1O6Z NAD 5.94059
619 4ZVV GN0 6.0241
620 4ZVV NAD 6.0241
621 4YAC NAI 6.06061
622 1ZH8 NAP 6.17647
623 2BOI MFU 6.19469
624 3NJ4 NAD 6.2069
625 3NJ4 AFX 6.2069
626 5YB7 ORN 6.21118
627 5YB7 FAD 6.21118
628 5UAO FAD 6.21118
629 2F5Z FAD 6.25
630 1ZQ9 SAM 6.31579
631 5TOW NAI 6.38821
632 5TOW ADN 6.38821
633 2Z3Y F2N 6.41822
634 5JE0 AZ8 6.47773
635 5JE0 SAH 6.47773
636 1C3V NDP 6.53061
637 5X9D 80F 6.57895
638 4OPC PGT 6.62252
639 4OPC FDA 6.62252
640 3WGT QSC 6.62824
641 3WGT FAD 6.62824
642 5N53 8NB 6.66667
643 1ZBQ NAD 6.72783
644 5X20 NAD 6.73077
645 5AYV KPL 6.79612
646 5AYV NAP 6.79612
647 4Z24 FAD 6.8323
648 4NBU NAI 6.8323
649 4Y9D NAI 6.88525
650 3A06 NDP 6.91489
651 3A06 FOM 6.91489
652 9LDB NAD 6.92771
653 9LDT NAD 6.92771
654 1UAY ADN 7.02479
655 6GAS FAD 7.03934
656 4EDF UPG 7.03934
657 5HXI FAD 7.12401
658 5HXI 5HN 7.12401
659 4DSG FAD 7.24638
660 4DSG UDP 7.24638
661 2YVJ NAI 7.33945
662 4QTU SAM 7.40741
663 5TTJ FAD 7.45342
664 1LVL FAD 7.45342
665 4M52 FAD 7.45342
666 4M52 M52 7.45342
667 1LVL NAD 7.45342
668 2A8X FAD 7.45342
669 5EJ2 NAD 7.46753
670 2JE7 XMM 7.53138
671 2EWM NAD 7.63052
672 1NFQ NAI 7.69231
673 3L4S NAD 7.7381
674 3L4S 3PG 7.7381
675 3CMC NAD 7.78443
676 2PW0 TRC 7.80856
677 4GLL NAD 8.01187
678 1NVM NAD 8.01282
679 1E3W NAD 8.04598
680 1E6W NAD 8.07692
681 1RP0 AHZ 8.09859
682 5YJI SAH 8.09859
683 5YJI 8WO 8.09859
684 4CJX NAP 8.15047
685 2XYQ SAH 8.19672
686 5ODQ FAD 8.24742
687 1E1M NAP 8.26087
688 1E1M FAD 8.26087
689 1E6E FAD 8.26087
690 2WSB NAD 8.26772
691 2BGM NAJ 8.27338
692 3GDN HBX 8.28157
693 3GDN FAD 8.28157
694 2HMT NAI 8.33333
695 4PIO SAH 8.35913
696 5YEC ATP 8.40336
697 3FUU ADN 8.48709
698 3QV1 NAD 8.53659
699 4MOP 2H5 8.69565
700 4NBT NAD 8.75
701 1KEV NDP 8.83191
702 2NAD NAD 8.90585
703 5BW4 SAM 8.98876
704 5MLR NAP 9.00243
705 5MLR GRQ 9.00243
706 1HDR NAD 9.01639
707 1KPG SAH 9.05923
708 1KPH SAH 9.05923
709 1J5P NAD 9.09091
710 5YJF SAH 9.15493
711 5YJF 8WO 9.15493
712 3AD8 NAD 9.15842
713 3AD8 FAD 9.15842
714 3AD8 PYC 9.15842
715 5Z21 NAI 9.21788
716 3Q9N COA 9.21986
717 4BVA T3 9.25373
718 4BVA NDP 9.25373
719 1NM5 NAD 9.35961
720 3MAG SAH 9.44625
721 1DIG L37 9.47712
722 1DIG NAP 9.47712
723 2DT5 NAD 9.47867
724 5O4J 9KH 9.48905
725 5O4J SAH 9.48905
726 5O4J PJL 9.48905
727 1U8X NAD 9.52381
728 4GKV NAD 9.52381
729 1RJW ETF 9.73451
730 3MCT SAH 9.76431
731 1PZG A3D 9.96979
732 2GAG NAD 10.101
733 2GAG FOA 10.101
734 2GAG FAD 10.101
735 2O07 SPD 10.1974
736 2O07 MTA 10.1974
737 5H81 NAP 10.2828
738 3RNM FAD 10.3448
739 1DL5 SAH 10.4101
740 1RM0 D6P 10.559
741 1RM0 NAI 10.559
742 6F9Q NAD 10.6618
743 4J4H 1J1 10.8108
744 4J4H NAI 10.8108
745 4JK3 NAD 10.8108
746 4YCA NDP 10.8844
747 2OOR NAD 10.9195
748 5J60 FAD 10.9375
749 1O94 ADP 11.25
750 5L95 AMP 11.25
751 1LTH NAD 11.9122
752 4PLG OXM 12.5749
753 4PLG NAI 12.5749
754 1FL2 FAD 12.5806
755 1HYH NAD 12.6214
756 2HK9 NAP 12.7273
757 2HK9 ATR 12.7273
758 3NUG NAD 12.9555
759 4EIP FAD 13.0435
760 4C2W ANP 13.4615
761 1L1E SAH 13.5889
762 1BXK NAD 13.6646
763 2DC1 NAD 14.8305
764 1SOW NAD 15.2439
765 1T26 GBD 15.528
766 1T26 NAI 15.528
767 1VM6 NAD 15.7895
768 4OM8 NAD 15.8576
769 2A92 NAI 16.8224
770 2F1K NAP 17.5627
771 5O42 BGC 17.8832
772 5O42 NAD 17.8832
773 5O42 9JW 17.8832
774 4II2 ATP 18.0723
775 2HJR APR 19.0476
776 5ZW3 SAH 19.1111
777 4V3I ASP LEU THR ARG PRO 19.8444
778 4PLT NAI 28.7009
779 4PLT OXM 28.7009
780 1UP7 NAD 44.3645
Pocket No.: 2; Query (leader) PDB : 1VJT; Ligand: NAD; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1vjt.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
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