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Receptor
PDB id Resolution Class Description Source Keywords
1VKF 1.65 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF A GLYCEROL UPTAKE OPERON ANTITERMINATOR PROTEIN (TM1436) FROM THERMOTOGA MARITIMA MSB8 AT 1.65 A RE THERMOTOGA MARITIMA GLYCEROL UPTAKE OPERON ANTITERMINATOR-RELATED PROTEIN STRUCGENOMICS JOINT CENTER FOR STRUCTURAL GENOMICS JCSG PROTESTRUCTURE INITIATIVE PSI TRANSCRIPTION
Ref.: CRYSTAL STRUCTURE OF GLYCEROL UPTAKE OPERON ANTITERMINATOR-RELATED PROTEIN (TM1436) FROM THERMO MARITIMA AT 1.65 A RESOLUTION TO BE PUBLISHED
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CIT A:501;
C:502;
D:503;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
192.124 C6 H8 O7 C(C(=...
PO4 B:401;
Invalid;
none;
submit data
94.971 O4 P [O-]P...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1VKF 1.65 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF A GLYCEROL UPTAKE OPERON ANTITERMINATOR PROTEIN (TM1436) FROM THERMOTOGA MARITIMA MSB8 AT 1.65 A RE THERMOTOGA MARITIMA GLYCEROL UPTAKE OPERON ANTITERMINATOR-RELATED PROTEIN STRUCGENOMICS JOINT CENTER FOR STRUCTURAL GENOMICS JCSG PROTESTRUCTURE INITIATIVE PSI TRANSCRIPTION
Ref.: CRYSTAL STRUCTURE OF GLYCEROL UPTAKE OPERON ANTITERMINATOR-RELATED PROTEIN (TM1436) FROM THERMO MARITIMA AT 1.65 A RESOLUTION TO BE PUBLISHED
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 291 families.
1 1VKF - CIT C6 H8 O7 C(C(=O)O)C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 247 families.
1 1VKF - CIT C6 H8 O7 C(C(=O)O)C....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1VKF - CIT C6 H8 O7 C(C(=O)O)C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: CIT; Similar ligands found: 4
No: Ligand ECFP6 Tc MDL keys Tc
1 CIT 1 1
2 7QD 0.653846 0.958333
3 HCA 0.576923 0.884615
4 MAH 0.44 0.807692
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1VKF; Ligand: CIT; Similar sites found with APoc: 378
This union binding pocket(no: 1) in the query (biounit: 1vkf.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
1 1QDS PGA None
2 3U40 ADN None
3 3VHH VHH None
4 5UWA 8ND 1.06383
5 1YNQ NDP 1.59574
6 1U1F 183 1.59574
7 4RDI ATP 1.59574
8 6GZD LCI 1.59574
9 3CV7 NAP 2.12766
10 3CV7 C2U 2.12766
11 2J7T 274 2.12766
12 12AS AMP 2.12766
13 1GJC 130 2.12766
14 3LGS ADE 2.12766
15 3LGS SAH 2.12766
16 4TXJ THM 2.12766
17 2EQA AMP 2.65957
18 4XP7 FNR 2.65957
19 1SW0 PGA 2.65957
20 5DDW 5B6 2.65957
21 1H0H MGD 2.65957
22 1MI3 NAD 2.65957
23 3FXU TSU 2.65957
24 5CUO COA 2.65957
25 3IA4 MTX 2.65957
26 2B3D FAD 2.65957
27 5ZXD ATP 2.65957
28 4RT1 C2E 2.67857
29 2Q3R FMN 3.19149
30 4Q4K FMN 3.19149
31 4BG4 ADP 3.19149
32 3BZ3 YAM 3.19149
33 4AF0 IMP 3.19149
34 4TMC FMN 3.19149
35 4TMC HBA 3.19149
36 4YQE PLQ 3.19149
37 4YQE FMN 3.19149
38 4AUA 4AU 3.19149
39 1RHC F42 ACN 3.19149
40 2WQP WQP 3.19149
41 1KBI PYR 3.19149
42 1KBI FMN 3.19149
43 5AE2 FAD 3.19149
44 3C3N FMN 3.19149
45 5YF9 NIO 3.19149
46 5Z21 NAI 3.19149
47 4NAE 1GP 3.19149
48 2I7N ACO 3.19149
49 3BLI PYR 3.19149
50 4P6W MOF 3.19149
51 4BT5 23B 3.19149
52 1NV8 MEQ 3.19149
53 1F52 ADP 3.19149
54 1ADO 13P 3.19149
55 4E13 NAD 3.53357
56 2Y88 2ER 3.7234
57 4UTU LRY 3.7234
58 4UTW RFW 3.7234
59 1VP5 NAP 3.7234
60 4O8A FAD 3.7234
61 5XFV FMN 3.7234
62 1TIW TFB 3.7234
63 1TIW FAD 3.7234
64 5Z6T NAP 3.7234
65 3U6W KIV 3.7234
66 3EXS 5RP 3.7234
67 5AZ1 NDP 3.7234
68 2R5N R5P 3.7234
69 2R5N RP5 3.7234
70 3CTL S6P 3.7234
71 1ZOS MTM 3.7234
72 2R5N TPP 3.7234
73 5FP4 YC8 3.7234
74 2FB3 MET 3.7234
75 1ODJ GMP 3.7234
76 5OBY ANP 3.7234
77 2FB3 5AD 3.7234
78 4H6B 10X 3.7234
79 5BU3 4W9 3.80435
80 4K3H 1OM 4.23729
81 1F74 NAY 4.25532
82 1OYB HBA 4.25532
83 1OYB FMN 4.25532
84 4Z87 5GP 4.25532
85 1JXZ BCA 4.25532
86 1NZY BCA 4.25532
87 2Q8Z NUP 4.25532
88 2Y7G AAE 4.25532
89 4HKP TKW 4.25532
90 3MI2 PFU 4.25532
91 5M42 FMN 4.25532
92 4HKP 16B 4.25532
93 4CRL C1I 4.25532
94 4ZLU ADP 4.25532
95 4ZLU 4PW 4.25532
96 2G37 FAD 4.25532
97 1ZQ5 E04 4.25532
98 1ZQ5 NAP 4.25532
99 1WDK NAD 4.25532
100 6F4W FMC 4.25532
101 1ZGD NAP 4.25532
102 4H6Q TFB 4.25532
103 4H6Q FAD 4.25532
104 2F1K NAP 4.25532
105 4OAG ADP 4.25532
106 1OFD AKG 4.25532
107 1R27 MGD 4.25532
108 1UJP CIT 4.25532
109 3L9W AMP 4.25532
110 3T4L ZEA 4.25532
111 3L9W GSH 4.25532
112 1JF0 CZH 4.25532
113 4OUC 5ID 4.25532
114 3KRB NAP 4.25532
115 1OFD FMN 4.25532
116 3WCZ NAP 4.25532
117 2QCD U5P 4.61538
118 2TPS TPS 4.78723
119 1M15 ADP 4.78723
120 1M15 ARG 4.78723
121 5F3I 5UJ 4.78723
122 2FLI DX5 4.78723
123 3QH2 3NM 4.78723
124 1PVN MZP 4.78723
125 3HAD NAD 4.78723
126 5LY1 PPI 4.78723
127 5JKG 6LF 4.78723
128 5KD6 6C7 4.78723
129 2V63 CAP 4.78723
130 4WKB TDI 4.78723
131 2VDH CAP 4.78723
132 2V67 CAP 4.78723
133 2V6A CAP 4.78723
134 4FFS BIG 4.78723
135 3EWC MCF 4.78723
136 6E2O S0L 4.78723
137 2F57 23D 4.78723
138 1GK8 CAP 4.78723
139 1IR2 CAP 4.78723
140 5N9Z CAP 4.78723
141 1UZH CAP 4.78723
142 2V68 CAP 4.78723
143 5OYA CAP 4.78723
144 3H78 BE2 4.78723
145 1F76 FMN 4.78723
146 4IAW LIZ 4.78723
147 1VRP IOM 4.78723
148 4IMG NGF 4.78723
149 5J5R IMP 4.88432
150 5J5R 6G1 4.88432
151 5OWC AYZ 4.91803
152 4H8N NDP 5.31915
153 1O5R FR9 5.31915
154 1M5W DXP 5.31915
155 1LOR BMP 5.31915
156 1ME8 RVP 5.31915
157 1X1Z BMP 5.31915
158 2BGS NDP 5.31915
159 3HZT J60 5.31915
160 4QNW FMN 5.31915
161 1OX5 1PR 5.31915
162 1UZD CAP 5.31915
163 4WNP 3RJ 5.31915
164 5XGX DAS DLY 5.31915
165 3G5N PB2 5.31915
166 3W0O ADP 5.31915
167 3W0O HY0 5.31915
168 1AL8 FMN 5.31915
169 2PZI AXX 5.31915
170 1AL8 DHP 5.31915
171 1I7M CG 5.31915
172 5N2D 8J8 5.31915
173 2GJN FMN 5.31915
174 4LAE NAP 5.38922
175 4LAE 1VM 5.38922
176 4R38 RBF 5.71429
177 6GW1 CHO 5.73248
178 1BWV CAP 5.7971
179 1DQX BMP 5.85106
180 3JQ3 ADP 5.85106
181 1LYX PGA 5.85106
182 3ATY FMN 5.85106
183 1KQF MGD 5.85106
184 2XA2 UPG 5.85106
185 5IVE 6E8 5.85106
186 5WS9 ATP 5.85106
187 2GCG NDP 5.85106
188 1JE1 GMP 5.85106
189 1GXS DKA 5.85106
190 1RJW ETF 5.85106
191 6ACS CIT 5.85106
192 5C4L 4XR 5.85106
193 5GVH FMN 5.85106
194 3G6K FAD 5.85106
195 4U03 GTP 5.85106
196 5JGA 6KC 5.85106
197 4RFR RHN 5.85106
198 5ZCT ANP 5.85106
199 1VKO NAD 5.85106
200 5TH5 MET 5.85106
201 2QK4 ATP 5.85106
202 3KPX CZH 5.85106
203 2AMT GPP 6.28931
204 2Z6I FMN 6.3253
205 3W9Z FMN 6.38298
206 1OVD ORO 6.38298
207 1OVD FMN 6.38298
208 4M5P FMN 6.38298
209 1G8K MGD 6.38298
210 1PS9 FMN 6.38298
211 4NJH 2K8 6.38298
212 4NJH SAM 6.38298
213 1U6R ADP 6.38298
214 4EWH T77 6.38298
215 1U6R IOM 6.38298
216 6BKA FMN 6.91489
217 4EWN 0VR 6.91489
218 2HSA FMN 6.91489
219 5KZD RCJ 6.91489
220 3KDN CAP 6.91489
221 2OQ2 A3P 6.91489
222 4EU7 COA 6.91489
223 5KJU 6TO 6.91489
224 3APT FAD 6.91489
225 2BL9 CP6 6.91489
226 2BL9 NDP 6.91489
227 6BXI ANP 6.91489
228 3TN7 NJP 6.91489
229 5F7J ADE 6.91489
230 4I4Z 2NE 6.91489
231 5KF6 TFB 7.44681
232 5KF6 FAD 7.44681
233 1A69 FMB 7.44681
234 1I7L ATP 7.44681
235 3PP0 03Q 7.44681
236 4A3U FMN 7.44681
237 2C6Q IMP 7.44681
238 6BFG FMN 7.44681
239 4JEJ 1GP 7.44681
240 2C6Q NDP 7.44681
241 2BP1 NDP 7.44681
242 5FWJ MMK 7.44681
243 5AHN IMP 7.44681
244 2C91 NAP 7.44681
245 3VPC ADP 7.44681
246 1V1A KDG 7.44681
247 4IJR NDP 7.44681
248 1Q6O LG6 7.97872
249 3BW2 FMN 7.97872
250 1EOM NAG MAN MAN MAN NAG GAL NAG GAL 7.97872
251 4NMC 2OP 7.97872
252 2GVJ DGB 7.97872
253 1T7Q 152 7.97872
254 1T7Q COA 7.97872
255 1EU1 MGD 7.97872
256 5HM3 649 7.97872
257 4BVA NDP 7.97872
258 5A3T MMK 7.97872
259 5MUJ RAM ARA RAM 8OQ RAM GAL XXM 8PK 7.97872
260 2YPI PGA 7.97872
261 4NMC FAD 7.97872
262 1AFS NAP 7.97872
263 2FTB OLA 8
264 2F5Z FAD 8.01688
265 5O3Q CMP 8.33333
266 3C2O NTM 8.51064
267 5FAL COA 8.51064
268 5FAL SKT 8.51064
269 3B0P FMN 8.51064
270 2ZRU FMN 8.51064
271 1XCL SAH 8.51064
272 1TB3 FMN 8.51064
273 3VKC FPQ 9.04255
274 3B9O FMN 9.04255
275 3CV6 NAP 9.04255
276 3CV6 HXS 9.04255
277 1DMR PGD 9.04255
278 5JE8 NAD 9.04255
279 1YKJ FAD 9.04255
280 6FNU FAD 9.04255
281 4N02 FNR 9.04255
282 3TAO PGH 9.3633
283 4IGH FMN 9.57447
284 4IGH ORO 9.57447
285 4IGH 1EA 9.57447
286 3C1X CKK 9.57447
287 6AA8 NAD 9.57447
288 2Q3O FMN 9.57447
289 2F6U CIT 9.57447
290 4WKC BIG 9.57447
291 3F3E LEU 9.57447
292 3GC0 AMP 9.57447
293 1IR1 CAP 9.57447
294 4BCN T9N 9.57447
295 5XDT GDP 9.57447
296 4WZH FMN 9.57447
297 4BCM T7Z 9.57447
298 3HAZ FAD 10.1064
299 3MJY FMN 10.1064
300 3MJY IJZ 10.1064
301 1TRD PGH 10.1064
302 1RBL CAP 10.1064
303 5A6N U7E 10.1064
304 3OID NDP 10.1064
305 2RDT 2RD 10.5943
306 2RDT FMN 10.5943
307 5A5W GUO 10.6383
308 1QPR PPC 10.6383
309 1ICP FMN 10.6383
310 1W8S FBP 10.6383
311 1SR9 KIV 10.6383
312 3D91 REM 10.6383
313 3B1J NAD 10.6383
314 3B20 NAD 10.6383
315 4WAS NAP 10.6383
316 3SLS ANP 10.6383
317 1UWK NAD 11.1702
318 1UWK URO 11.1702
319 1T36 ADP 11.1702
320 1WDD CAP 11.1702
321 3FC2 IBI 11.1702
322 2YW2 ATP 11.1702
323 2Z6J FMN 11.7021
324 5I7A 68Q 11.7021
325 1VA6 ADP 11.7021
326 1VA6 P2S 11.7021
327 4C5N ACP 11.7021
328 4C5N PXL 11.7021
329 4Z0G 5GP 12.234
330 4YJK URA 12.234
331 5VSM 5AD 12.234
332 5VSM MET 12.234
333 4CYI ATP 12.234
334 3WG6 NDP 12.766
335 5WAN FMN 12.766
336 4WOE ADP 12.766
337 2PV7 NAD 12.766
338 3O84 HTJ 12.766
339 3KRU FMN 13.2979
340 1VYP FMN 13.2979
341 1VYP TNF 13.2979
342 5EYK 5U5 13.5593
343 2H8Z 8CM 13.8298
344 2H8Z FMN 13.8298
345 5DMZ ADP 13.8298
346 5XNC N4P 13.8298
347 1LBF 137 14.3617
348 1JCM 137 14.3617
349 2QUN FUD 14.3617
350 4YCA NDP 14.3617
351 2IVF MD1 15.4255
352 3OVR 5SP 15.4255
353 4ORM 2V6 15.9574
354 4ORM FMN 15.9574
355 4ORM ORO 15.9574
356 1TV5 FMN 15.9574
357 2RCU BUJ 15.9574
358 1RM6 FAD 15.9574
359 3EUF BAU 15.9574
360 4I9A NCN 15.9722
361 4C2V YJA 18.1818
362 2G50 PYR 18.617
363 3H7U NAP 19.1489
364 6FL8 ADP 19.1489
365 6FL8 TIY 19.1489
366 1DBT U5P 19.1489
367 5OCS FMN 19.6809
368 3RK1 ATP 19.6809
369 3H7R NAP 19.6809
370 2GOU FMN 21.2766
371 1S7G NAD 21.2766
372 4IXH IMP 21.2766
373 2ZYI STE 21.8085
374 3A4X NAG NAG NAG NDG 22.8723
375 1YB5 NAP 22.8723
376 1GTE IUR 23.4043
377 1GTE FMN 23.4043
378 2ADA HPR 24.4681
Pocket No.: 2; Query (leader) PDB : 1VKF; Ligand: CIT; Similar sites found with APoc: 187
This union binding pocket(no: 2) in the query (biounit: 1vkf.bio4) has 11 residues
No: Leader PDB Ligand Sequence Similarity
1 4WN5 MVC None
2 5WZU 7W3 None
3 2BDG PBZ 1.06383
4 3MTX PGT 1.3245
5 4RDH AMP 1.59574
6 1KDK DHT 1.69492
7 1RZ0 FAD 1.86335
8 2IO8 ADP 2.12766
9 5ABH YWN 2.12766
10 2HK9 NAP 2.12766
11 3KVY URA 2.12766
12 2RDE C2E 2.39044
13 4YZN 4K5 2.65957
14 5YU3 NAD 2.65957
15 5YU3 PRO 2.65957
16 3O0G 3O0 2.65957
17 4IZY 1J2 3.19149
18 3PE2 E1B 3.19149
19 5AE2 FYC 3.19149
20 5AHM IMP 3.19149
21 6GQM F8H 3.19149
22 1BYG STU 3.19149
23 4WCX MET 3.19149
24 1ZNY GDP 3.19149
25 5QIN J2V 3.19149
26 5YSI NCA 3.28947
27 2P1O NLA 3.7234
28 2P1O IHP 3.7234
29 2FB3 GTP 3.7234
30 4DK7 0KS 3.7234
31 6FAA ADP 3.7234
32 4CSV STI 3.7234
33 2CSN CKI 3.7234
34 3WQM B29 3.7234
35 4L9I 8PR 3.7234
36 5OKT 9XK 3.7234
37 5ECP ATP 3.7234
38 5ECP MET 3.7234
39 5ECP JAA 3.7234
40 1EQ2 NAP 3.7234
41 2A9D MTE 3.76344
42 5G3N X28 3.93701
43 3L0E G58 4.25532
44 2WZM NA7 4.25532
45 5MW4 5JU 4.25532
46 3BJE URA 4.25532
47 4JIQ 1L5 4.25532
48 4JIQ FMN 4.25532
49 5T79 NDP 4.25532
50 1OPK P16 4.44444
51 4OM8 NAD 4.78723
52 5DEY 59T 4.78723
53 5EJL C2E 4.78723
54 5D85 P1T 4.78723
55 1EIX BMQ 4.78723
56 3Q60 ATP 4.78723
57 4YKG FAD 4.78723
58 3ORK AGS 4.78723
59 4BHN BH9 4.78723
60 1FL2 FAD 4.78723
61 4U98 ACP 4.78723
62 2BII MTV 4.78723
63 6MVU K4V 4.78723
64 4YS0 ADP 4.78723
65 3NW7 LGV 4.88599
66 4P5E N6P 5.26316
67 3AQV TAK 5.31915
68 4YDD MGD 5.31915
69 4YDD MD1 5.31915
70 2BNJ XYP XYP AHR FER 5.31915
71 3GC8 B45 5.31915
72 4BI7 PGA 5.31915
73 5ODT ADP 5.31915
74 4WOP CTP 5.33333
75 4F9C 0SX 5.81717
76 5TO8 7FM 5.85106
77 3G6K POP 5.85106
78 4D42 W0I 5.85106
79 4D42 NAP 5.85106
80 5T9E NAP 5.85106
81 3RG9 NDP 5.85106
82 2UUU FAD 5.85106
83 5CSS G3P 5.85106
84 3KJS NAP 6.38298
85 4XB2 HSE 6.38298
86 5Y80 IRE 6.38298
87 4XB2 NDP 6.38298
88 4CW5 FMN 6.38298
89 4UUG PXG 6.38298
90 1GET NAP 6.91489
91 4I42 1HA 6.91489
92 1REQ DCA 6.91489
93 3B1F NAD 6.91489
94 1LQA NDP 6.91489
95 3H7J PPY 6.99588
96 4CE5 PDG 7.44681
97 4L3L 5FI 7.44681
98 4UTG ANP 7.44681
99 4E1O PLP PVH 7.44681
100 2DKD NG1 7.44681
101 2XTS MTE 7.44681
102 6G9I CXX 7.7381
103 2AG4 OLA 7.92683
104 2AG4 LP3 7.92683
105 5LI9 ACP 7.97872
106 4BVA T3 7.97872
107 1KBJ FMN 7.97872
108 4Y8D 49J 7.97872
109 2C49 ADN 7.97872
110 5MN0 A8S 7.97872
111 6CI9 NAP 7.97872
112 5TVF CGQ 8.23529
113 2R5T ANP 8.51064
114 2NYA MGD 8.51064
115 1NVM NAD 8.51064
116 4QAR ADE 8.51064
117 5HES 032 8.51064
118 1AOE NDP 8.51064
119 1AOE GW3 8.51064
120 3A7R LAQ 8.51064
121 1Q6D GLC GLC 9.04255
122 3NKS FAD 9.04255
123 2ZXI FAD 9.04255
124 4M69 ANP 9.04255
125 1N46 PFA 9.04255
126 5EH0 5NW 9.04255
127 2G5C NAD 9.04255
128 1V3S ATP 9.48276
129 1RBO CAP 9.57447
130 4RFM 3P6 9.57447
131 2BPM 529 9.57447
132 1C1X HFA 9.57447
133 1WG8 SAM 9.57447
134 2A9K NAD 9.57447
135 5XDT ZI7 9.57447
136 3RFA SAM 9.57447
137 4PIV 2W4 9.57447
138 1BW9 PPY 9.57447
139 1GZF NAD 9.57447
140 4OCV ANP 10.1064
141 4XH0 ADP 10.1064
142 1TMO 2MD 10.1064
143 3RFV NAI 10.1124
144 1VEM GLC GLC 10.6383
145 1SUW NAP 10.6383
146 6AC9 ANP 10.6383
147 1ZPT FAD 11.1702
148 2AC7 ADN 11.1702
149 2A06 SMA 11.2903
150 1UUO BRF 11.7021
151 1UUO FMN 11.7021
152 1UUO ORO 11.7021
153 2CDC XYP 11.7021
154 2CDC XYS 11.7021
155 2CDC NAP 11.7021
156 3DAK ANP 11.7021
157 5HVJ ANP 11.7021
158 2BKK ADP 11.8343
159 3O9L LPN 12.0482
160 4YRY NAD 12.234
161 3P0F BAU 12.234
162 4FHD 0TT 12.234
163 4FHD EEM 12.234
164 4GIM PSU 12.234
165 2OJW ADP 12.234
166 1XVV CCQ 12.766
167 3VOT ADP 13.2979
168 1XJD STU 13.8298
169 2C42 TPP 14.3617
170 2C42 PYR 14.3617
171 3SM2 478 14.3939
172 5EYP GDP 15.3846
173 4IKR PVP 15.4255
174 6GUE FB8 15.4255
175 2ET1 GLV 15.4255
176 2WAT COA 15.5738
177 3HF3 FMN 15.9574
178 2V7O DRN 15.9574
179 2WSI FAD 15.9574
180 2D1S SLU 16.4894
181 3GZ8 APR 16.6667
182 2VN9 GVD 19.1489
183 1O94 AMP 21.2766
184 4Y85 499 21.2766
185 2GAG NAD 21.8085
186 6G5J EM8 23.6364
187 4UAL 3FV 25
Pocket No.: 3; Query (leader) PDB : 1VKF; Ligand: CIT; Similar sites found with APoc: 167
This union binding pocket(no: 3) in the query (biounit: 1vkf.bio3) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 6C5F 7L9 None
2 6ECT SAM 1.06383
3 4G17 0VN 1.59574
4 3ORF NAD 1.59574
5 5UCD NAP 2.12766
6 1NYT NAP 2.12766
7 4DC2 ADE 2.12766
8 1DJL NAP 2.12766
9 5B3A 0JO 2.12766
10 4OR7 NAP 2.42424
11 5DXV NAP 2.5641
12 3IX9 NDP 2.65957
13 2A8Y MTA 2.65957
14 1UXG FUM 2.65957
15 1UXG NAD 2.65957
16 3RI1 3RH 2.65957
17 4AU8 Z3R 2.65957
18 3VPH OXM 2.65957
19 3VPH NAD 2.65957
20 2PVN P63 2.65957
21 1H70 CIR 2.65957
22 4IF4 BEF 3.19149
23 3DJF BC3 3.19149
24 3GDN HBX 3.19149
25 1LDN NAD 3.19149
26 5JWC FAD 3.19149
27 1HYH NAD 3.19149
28 4CNG SAH 3.19149
29 3DLS ADP 3.19149
30 4PNE SAH 3.19149
31 1FDJ 2FP 3.19149
32 3E7O 35F 3.19149
33 2JAH NDP 3.19149
34 5OCM NAP 3.19149
35 1CF2 NAP 3.19149
36 2B96 ANN 3.25203
37 3EWP APR 3.38983
38 1RM0 NAI 3.7234
39 5W4W 9WG 3.7234
40 1T90 NAD 3.7234
41 5TBS ADE 3.7234
42 2YYY NAP 3.7234
43 2QTZ NAP 3.7234
44 5T96 79J 3.7234
45 4KM2 ATR 3.91061
46 4KM2 TOP 3.91061
47 2NX1 RP5 4.25532
48 2NX1 PEP 4.25532
49 1V8B NAD 4.25532
50 5UKL SIX 4.25532
51 3UWV 2PG 4.25532
52 1U1I NAD 4.25532
53 6AYR BIG 4.25532
54 4QJK COA 4.25532
55 4EUU BX7 4.25532
56 6G34 5ID 4.25532
57 5BW4 SAM 4.25532
58 1MV8 NAD 4.25532
59 6H1U ASP 4.25532
60 2W9S NDP 4.34783
61 4Z1D PEP 4.71014
62 5UR1 YY9 4.78723
63 1VRP ADP 4.78723
64 3ICR FAD 4.78723
65 2IV2 MGD 4.78723
66 3ICS FAD 4.78723
67 3IID APR 4.78723
68 2IV2 2MD 4.78723
69 2Z7R STU 4.78723
70 4XZ9 G3P 4.93274
71 3WGT FAD 5.31915
72 3WGT QSC 5.31915
73 5OJL TXP 5.31915
74 6F97 FAD 5.31915
75 5UAV TFB 5.31915
76 5UAV NDP 5.31915
77 6A1G 9OL 5.31915
78 1PNO NAP 5.55556
79 5WS9 AMP 5.85106
80 4KS7 X4Z 5.85106
81 3RG9 WRA 5.85106
82 3GGF GVD 5.85106
83 4JE7 BB2 5.85106
84 4XJ2 FMN 5.85106
85 3WQD PLP 999 5.85106
86 4L8V NAP 5.85106
87 2NP9 YE1 5.85106
88 5KJW 53C 5.85106
89 4I6H 1C8 5.85106
90 5M67 NAD 6.38298
91 2CVZ NDP 6.38298
92 5M67 3D1 6.38298
93 1WP4 NDP 6.38298
94 1GUZ NAD 6.38298
95 3KJS DQ1 6.38298
96 4D57 ARG AMP 6.38298
97 1TE2 PGA 6.38298
98 5IXG OTP 6.50888
99 4M7V NAP 6.85714
100 6CZ7 MGD 6.91489
101 4EU7 CIT 6.91489
102 3GFB NAD 6.91489
103 4NBU NAI 6.91489
104 2HGS ADP 6.91489
105 1OMO NAD 6.91489
106 1K27 MTM 7.44681
107 4LTN FMN 7.44681
108 4LTN NAI 7.44681
109 4EIL NDP 7.44681
110 1RZM E4P 7.44681
111 6H3O FAD 7.44681
112 4FN4 NAD 7.44681
113 3FYP PEP 7.97872
114 5E72 SAM 7.97872
115 4CQM NAP 7.97872
116 5AHO TLA 8.51064
117 2H21 SAM 8.51064
118 4F07 FAD 8.51064
119 1WHT BZS 8.51064
120 4XFR CIT 8.51064
121 4Z24 FAD 9.04255
122 4RVG TYD 9.04255
123 5KOK SAH 9.04255
124 3DAA PDD 9.04255
125 4S28 SAH 9.04255
126 4S28 AIR 9.04255
127 4PIV NDP 9.57447
128 6FRN FMN 9.57447
129 1CX9 NHP 10.1064
130 2YAK OSV 10.1064
131 4X7Q 3YR 10.1064
132 4CQE CQE 10.1064
133 4XV1 904 10.1064
134 4WAS COO 10.6383
135 3BC9 ACR 10.6383
136 1X87 NAD 10.6383
137 2D2I NAP 10.6383
138 3OND ADN 11.1702
139 3OND NAD 11.1702
140 4LPS GDP 11.1702
141 1EKO I84 11.1702
142 3RYC GTP 11.1888
143 3MVH WFE 11.7021
144 4LNU GDP 11.8343
145 5EIB GTP 11.8343
146 4LNU GTP 11.8343
147 2WJH FLC 12.0482
148 4MCC 21X 12.766
149 5DBX ANP 13.2979
150 3ML1 MGD 13.8298
151 2RGJ FAD 13.8298
152 3FGZ BEF 14.8438
153 3M2W L8I 14.8936
154 3C0G 3AM 14.8936
155 2OHH FMN 14.8936
156 5MZY 8EZ 15.4255
157 3NHT U46 15.4255
158 3OIX FMN 15.9574
159 4ZEI LAO 17.0213
160 4XT8 TMQ 17.5532
161 4XT8 NAP 17.5532
162 3B6R ADP 17.5532
163 2DFV NAD 17.5532
164 1K4M NAD 18.0851
165 1PL6 NAD 18.0851
166 2YAB AMP 20.7447
167 1O94 ADP 21.2766
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