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- Class : .ZIP | .CSV
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 20 families. | |||||
1 | 1W5B | - | GTP | C10 H16 N5 O14 P3 | c1nc2c(n1[.... |
2 | 1W5A | - | GTP | C10 H16 N5 O14 P3 | c1nc2c(n1[.... |
3 | 1W58 | - | G2P | C11 H18 N5 O13 P3 | c1nc2c(n1[.... |
4 | 2VAP | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 14 families. | |||||
1 | 4DXD | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
2 | 3WGM | - | GTP | C10 H16 N5 O14 P3 | c1nc2c(n1[.... |
3 | 2RHL | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
4 | 2RHO | - | GSP | C10 H16 N5 O13 P3 S | c1nc2c(n1[.... |
5 | 5XDV | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
6 | 5XDT | - | MB3 | C5 H9 N O | CN1CCCC1=O |
7 | 6RVQ | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
8 | 6SI9 | Kd = 18.2 nM | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
9 | 6RVP | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
10 | 5H5G | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
11 | 6RVN | Kd = 18.2 nM | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
12 | 6KVP | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
13 | 5H5H | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
14 | 5H5I | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
15 | 6KVQ | Kd = 0.88 uM | DVX | C33 H25 B Br F7 N4 O5 | [B-]1(n2c(.... |
16 | 5XDW | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
17 | 5MN4 | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
18 | 5XDU | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
19 | 1W5F | - | G2P | C11 H18 N5 O13 P3 | c1nc2c(n1[.... |
20 | 1RQ2 | ic50 = 3 mM | CIT | C6 H8 O7 | C(C(=O)O)C.... |
21 | 1RLU | - | GSP | C10 H16 N5 O13 P3 S | c1nc2c(n1[.... |
22 | 1W5B | - | GTP | C10 H16 N5 O14 P3 | c1nc2c(n1[.... |
23 | 1W5A | - | GTP | C10 H16 N5 O14 P3 | c1nc2c(n1[.... |
24 | 1W58 | - | G2P | C11 H18 N5 O13 P3 | c1nc2c(n1[.... |
25 | 2VAP | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
26 | 6LL5 | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
27 | 6LL6 | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
28 | 6UMK | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
29 | 6UNX | - | GTP | C10 H16 N5 O14 P3 | c1nc2c(n1[.... |
30 | 2R6R | - | GDP | C10 H15 N5 O11 P2 | c1nc2c(n1[.... |
31 | 2R75 | Kd = 714 nM | 01G | C14 H23 N6 O15 P3 | C1COCCN1c2.... |
No: | Ligand | ECFP6 Tc | MDL keys Tc |
---|---|---|---|
1 | G2P | 1 | 1 |
2 | GP2 | 0.839506 | 1 |
3 | G | 0.777778 | 0.948052 |
4 | 5GP | 0.777778 | 0.948052 |
5 | GDP | 0.77381 | 0.961039 |
6 | GCP | 0.758621 | 0.987013 |
7 | GTP | 0.747126 | 0.961039 |
8 | GP3 | 0.741176 | 0.936709 |
9 | GNH | 0.724138 | 0.948718 |
10 | GAV | 0.714286 | 0.925 |
11 | GNP | 0.711111 | 0.936709 |
12 | 9GM | 0.711111 | 0.936709 |
13 | G1R | 0.7 | 0.948718 |
14 | GSP | 0.692308 | 0.91358 |
15 | GTP MG | 0.692308 | 0.923077 |
16 | GMV | 0.688889 | 0.936709 |
17 | ALF 5GP | 0.688889 | 0.857143 |
18 | GDP BEF | 0.681319 | 0.9 |
19 | GDP AF3 | 0.680851 | 0.857143 |
20 | G2R | 0.673684 | 0.974359 |
21 | GPG | 0.649485 | 0.925 |
22 | GDP ALF | 0.645833 | 0.857143 |
23 | GMP | 0.641975 | 0.846154 |
24 | Y9Z | 0.64 | 0.892857 |
25 | GDD | 0.64 | 0.925 |
26 | GDC | 0.64 | 0.925 |
27 | GKE | 0.64 | 0.925 |
28 | G5P | 0.637255 | 0.936709 |
29 | YGP | 0.63 | 0.869048 |
30 | G3A | 0.627451 | 0.936709 |
31 | GTG | 0.617647 | 0.902439 |
32 | GDR | 0.617647 | 0.925 |
33 | GFB | 0.617647 | 0.925 |
34 | 6CK | 0.61165 | 0.902439 |
35 | GDP 7MG | 0.605769 | 0.878049 |
36 | GKD | 0.6 | 0.925 |
37 | JB2 | 0.6 | 0.925 |
38 | KB7 | 0.595745 | 0.797619 |
39 | GPD | 0.59434 | 0.914634 |
40 | GDX | 0.59434 | 0.936709 |
41 | G3D | 0.587629 | 0.948052 |
42 | 3GP | 0.577778 | 0.910256 |
43 | G4P | 0.575758 | 0.948052 |
44 | 0O2 | 0.568627 | 0.948052 |
45 | JB3 | 0.567568 | 0.91358 |
46 | NGD | 0.5625 | 0.925 |
47 | U2G | 0.5625 | 0.902439 |
48 | KBD | 0.553398 | 0.797619 |
49 | APC | 0.553191 | 0.923077 |
50 | CG2 | 0.552632 | 0.902439 |
51 | FEG | 0.548673 | 0.870588 |
52 | 2MD | 0.547826 | 0.860465 |
53 | ZGP | 0.54386 | 0.860465 |
54 | 2GP | 0.543478 | 0.923077 |
55 | CAG | 0.533898 | 0.850575 |
56 | MGD | 0.533898 | 0.860465 |
57 | KBJ | 0.53271 | 0.790698 |
58 | GH3 | 0.519608 | 0.961039 |
59 | PGD | 0.516393 | 0.891566 |
60 | MD1 | 0.516393 | 0.882353 |
61 | GPX | 0.509615 | 0.910256 |
62 | FE9 | 0.508197 | 0.752577 |
63 | DBG | 0.508065 | 0.91358 |
64 | TPG | 0.508065 | 0.833333 |
65 | DGI | 0.50505 | 0.936709 |
66 | DGT | 0.5 | 0.936709 |
67 | P2G | 0.5 | 0.85 |
68 | G1R G1R | 0.496 | 0.890244 |
69 | I2C FE2 CMO CMO | 0.495935 | 0.782609 |
70 | G4M | 0.492424 | 0.872093 |
71 | PGD O | 0.492063 | 0.822222 |
72 | P1G | 0.489796 | 0.8625 |
73 | DGP | 0.489583 | 0.924051 |
74 | DG | 0.489583 | 0.924051 |
75 | QBQ | 0.485149 | 0.948052 |
76 | IDP | 0.484848 | 0.935065 |
77 | AKW | 0.483051 | 0.858824 |
78 | BGO | 0.483051 | 0.890244 |
79 | NYZ | 0.48 | 0.974359 |
80 | IMP | 0.479167 | 0.922078 |
81 | ACQ | 0.475248 | 0.910256 |
82 | G C | 0.471074 | 0.86747 |
83 | 38V | 0.460938 | 0.974684 |
84 | G7M | 0.459184 | 0.9125 |
85 | GGM | 0.459016 | 0.869048 |
86 | G1G | 0.452381 | 0.891566 |
87 | MGP | 0.451923 | 0.925 |
88 | 6G0 | 0.447619 | 0.925 |
89 | APC G U | 0.445312 | 0.9 |
90 | RBY | 0.441176 | 0.898734 |
91 | ADV | 0.441176 | 0.898734 |
92 | SGP | 0.44 | 0.797619 |
93 | AP2 | 0.438776 | 0.923077 |
94 | A12 | 0.438776 | 0.923077 |
95 | R7I | 0.438095 | 0.910256 |
96 | R5I | 0.438095 | 0.910256 |
97 | C2E | 0.436893 | 0.886076 |
98 | PCG | 0.436893 | 0.897436 |
99 | 35G | 0.436893 | 0.897436 |
100 | GPC | 0.436508 | 0.848837 |
101 | 6YZ | 0.433962 | 0.910256 |
102 | 5GP 5GP | 0.432692 | 0.85 |
103 | O02 | 0.423077 | 0.9125 |
104 | CZF | 0.419048 | 0.897436 |
105 | M7G A2M G | 0.418301 | 0.802198 |
106 | GTA | 0.411765 | 0.902439 |
107 | G2Q | 0.410714 | 0.974359 |
108 | ACP | 0.407767 | 0.910256 |
109 | ADP | 0.405941 | 0.884615 |
110 | MGQ | 0.405405 | 0.901235 |
111 | UCG | 0.402985 | 0.878049 |
112 | AMP | 0.402062 | 0.858974 |
113 | A | 0.402062 | 0.858974 |
114 | 93A | 0.401961 | 0.804598 |
115 | AMZ | 0.4 | 0.883117 |
116 | C2R | 0.4 | 0.871795 |
This union binding pocket(no: 1) in the query (biounit: 2vap.bio1) has 30 residues | |||
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No: | Leader PDB | Ligand | Sequence Similarity |