Receptor
PDB id Resolution Class Description Source Keywords
1XXA 2.2 Å NON-ENZYME: TRANSCRIPT_TRANSLATE C-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR/ L- ARGININE COMPLEX; PB DERIVATIVE ESCHERICHIA COLI K12 COMPLEX (DNA BINDING PROTEIN/PEPTIDE)
Ref.: STRUCTURE OF THE OLIGOMERIZATION AND L-ARGININE BINDING DOMAIN OF THE ARGININE REPRESSOR OF ESCHERICHIA COLI. J.MOL.BIOL. V. 256 377 1996
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ARG A:1;
A:157;
C:1;
D:1;
E:1;
F:1;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
175.209 C6 H15 N4 O2 C(C[C...
PB C:416;
C:419;
D:418;
F:417;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
207.2 Pb [Pb+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1XXA 2.2 Å NON-ENZYME: TRANSCRIPT_TRANSLATE C-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR/ L- ARGININE COMPLEX; PB DERIVATIVE ESCHERICHIA COLI K12 COMPLEX (DNA BINDING PROTEIN/PEPTIDE)
Ref.: STRUCTURE OF THE OLIGOMERIZATION AND L-ARGININE BINDING DOMAIN OF THE ARGININE REPRESSOR OF ESCHERICHIA COLI. J.MOL.BIOL. V. 256 377 1996
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 309 families.
1 1XXA - ARG C6 H15 N4 O2 C(C[C@@H](....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 263 families.
1 1XXA - ARG C6 H15 N4 O2 C(C[C@@H](....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 221 families.
1 1B4B - ARG C6 H15 N4 O2 C(C[C@@H](....
2 1XXA - ARG C6 H15 N4 O2 C(C[C@@H](....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ARG; Similar ligands found: 42
No: Ligand ECFP6 Tc MDL keys Tc
1 ARG 1 1
2 DAR 1 1
3 CIR 0.735294 0.763158
4 AAR 0.705882 0.783784
5 ILO 0.615385 0.783784
6 3AR 0.595238 0.891892
7 4JK 0.585366 0.789474
8 NMM 0.585366 0.888889
9 HAR 0.585366 0.780488
10 VUR 0.585366 0.810811
11 VIO 0.581395 0.769231
12 WT2 0.571429 0.805556
13 DA2 0.55814 0.744186
14 3KJ 0.545455 0.680851
15 2MR 0.545455 0.864865
16 2YH 0.545455 0.65
17 1KJ 0.533333 0.744186
18 JM2 0.533333 0.731707
19 NRG 0.521739 0.622642
20 2YJ 0.521739 0.619048
21 RPI 0.521739 0.64
22 API 0.515152 0.611111
23 LN6 0.510638 0.725
24 JM7 0.5 0.731707
25 HRG 0.5 0.941176
26 AS1 0.489796 0.8
27 2KJ 0.489796 0.727273
28 D20 0.489796 0.744186
29 ORN 0.472222 0.757576
30 JM6 0.470588 0.697674
31 JM8 0.470588 0.714286
32 JM4 0.470588 0.697674
33 LYS ARG LYS ARG LYS ARG LYS ARG 0.463415 0.848485
34 MLZ 0.463415 0.65
35 JM5 0.461538 0.714286
36 DLY 0.447368 0.735294
37 DAB 0.441176 0.685714
38 LYS 0.435897 0.764706
39 0TF 0.428571 0.619048
40 2YG 0.42 0.619048
41 PG3 0.416667 0.756757
42 6CL 0.414634 0.638889
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1XXA; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1xxa.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1XXA; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1xxa.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1XXA; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1xxa.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1XXA; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1xxa.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 1XXA; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 1xxa.bio1) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 1XXA; Ligand: ARG; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 1xxa.bio1) has 14 residues
No: Leader PDB Ligand Sequence Similarity
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