Receptor
PDB id Resolution Class Description Source Keywords
1Y0G 2.2 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI YCEI PROTEIN, STRU GENOMICS ESCHERICHIA COLI LIPID BINDING PROTEIN LIPOCALIN COFACTOR COENZYME DEHYDRHYDROLASE PREDICTED STRUCTURAL GENOMICS PROTEIN STRUCTURINITIATIVE PSI NYSGXRC NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS
Ref.: CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI YCEI PERI PROTEIN TO BE PUBLISHED
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
8PP A:320;
B:321;
C:322;
D:323;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
639.047 C46 H70 O CC(=C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1Y0G 2.2 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI YCEI PROTEIN, STRU GENOMICS ESCHERICHIA COLI LIPID BINDING PROTEIN LIPOCALIN COFACTOR COENZYME DEHYDRHYDROLASE PREDICTED STRUCTURAL GENOMICS PROTEIN STRUCTURINITIATIVE PSI NYSGXRC NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS
Ref.: CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI YCEI PERI PROTEIN TO BE PUBLISHED
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 544 families.
1 1Y0G - 8PP C46 H70 O CC(=CCCC(=....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 420 families.
1 1Y0G - 8PP C46 H70 O CC(=CCCC(=....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 319 families.
1 1Y0G - 8PP C46 H70 O CC(=CCCC(=....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: 8PP; Similar ligands found: 4
No: Ligand ECFP6 Tc MDL keys Tc
1 8PP 1 1
2 MQ7 0.447761 0.742857
3 MQ9 0.447761 0.742857
4 UQ6 0.409091 0.769231
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1Y0G; Ligand: 8PP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1y0g.bio1) has 42 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1Y0G; Ligand: 8PP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1y0g.bio1) has 41 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1Y0G; Ligand: 8PP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1y0g.bio2) has 42 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1Y0G; Ligand: 8PP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1y0g.bio2) has 42 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback