Receptor
PDB id Resolution Class Description Source Keywords
1YZL 1.85 Å NON-ENZYME: TRANSPORT GPPNHP-BOUND RAB9 GTPASE MUS MUSCULUS RAB GTPASE RAB9 VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:400;
Valid;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:401;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1S8F 1.77 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF RAB9 COMPLEXED TO GDP REVEALS A DIMER WITH AN ACTIVE CONFORMATION OF SWITCH II CANIS LUPUS FAMILIARIS INTRACELLULAR TRANSPORT VESICULAR TRAFFICKING HEMIHEDRAL TWINNING PROTEIN TRANSPORT
Ref.: CRYSTAL STRUCTURE OF RAB9 COMPLEXED TO GDP REVEALS A DIMER WITH AN ACTIVE CONFORMATION OF SWITCH II. FEBS LETT. V. 568 23 2004
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 199 families.
1 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 166 families.
1 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1s8f.bio3) has 19 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found: 567
This union binding pocket(no: 2) in the query (biounit: 1s8f.bio3) has 28 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4AG5 ADP 0.000005413 0.61132 None
2 1BTN I3P 0.0007536 0.52415 None
3 1UO5 PIH 0.002535 0.49306 None
4 2QLX RM4 0.002298 0.4593 None
5 3KMT SAH 0.0002621 0.45586 None
6 1NN5 2DT 0.0000345 0.44393 None
7 1TUV VK3 0.01974 0.42702 None
8 1YRX FMN 0.001302 0.42472 None
9 3KPE TM3 0.0106 0.42173 None
10 1V7R CIT 0.03619 0.41995 None
11 3BY8 MLT 0.01679 0.41798 None
12 1NJF AGS 0.0003695 0.41774 None
13 1NJF ADP 0.0002215 0.41344 None
14 3RFV NAI 0.0002793 0.41331 None
15 4FR3 0V4 0.004242 0.41272 None
16 2E1A MSE 0.00858 0.41058 None
17 4FR3 LYS ARG ARG LYS SEP VAL 0.005123 0.40987 None
18 1LNX URI 0.01176 0.40943 None
19 3RFV 15L 0.0004589 0.40524 None
20 2IYG FMN 0.007688 0.40383 None
21 1T57 FMN 0.000263 0.4018 None
22 1NN5 ANP 0.004999 0.40125 None
23 1Z44 NPO 0.01835 0.44438 1.12994
24 1M7G ADX 0.0005474 0.43932 1.12994
25 1M7G ADP 0.000571 0.4355 1.12994
26 1Z44 FMN 0.002808 0.41656 1.12994
27 1M7G AV2 0.000008085 0.41251 1.12994
28 1GV0 NAD 0.0006494 0.40547 1.12994
29 2Q8H TF4 0.0004372 0.51252 1.69492
30 2CHG ANP 0.0005106 0.46695 1.69492
31 2EB5 OXL 0.002297 0.45234 1.69492
32 1X1T NAD 0.002488 0.42138 1.69492
33 1UF5 CDT 0.004285 0.41836 1.69492
34 3NKS FAD 0.0005187 0.4179 1.69492
35 2Q09 DI6 0.006686 0.41511 1.69492
36 2VVG ADP 0.0000002769 0.40509 1.69492
37 1QDS PGA 0.0102 0.40309 1.69492
38 4NSQ COA 0.01357 0.40198 1.69492
39 1QJC PNS 0.004294 0.40246 1.89873
40 1ULE GLA GAL NAG 0.01912 0.42119 2
41 2FR6 CTN 0.002769 0.4047 2.05479
42 2NCD ADP 0.000001889 0.6347 2.25989
43 2ZWS PLM 0.00006804 0.58171 2.25989
44 3FKQ ATP 0.00002782 0.52447 2.25989
45 4RJK PYR 0.002388 0.4661 2.25989
46 3ZPG 5GP 0.004176 0.46196 2.25989
47 1H0C AOA 0.005656 0.44062 2.25989
48 3LTW HLZ 0.005215 0.43594 2.25989
49 2Z9V PXM 0.003931 0.42996 2.25989
50 2Q2V NAD 0.0002714 0.42136 2.25989
51 2ZB3 NDP 0.0001786 0.42077 2.25989
52 1M5B BN1 0.002501 0.41302 2.25989
53 4MWV BCZ 0.001698 0.40175 2.25989
54 2XD9 XD9 0.02594 0.40616 2.39521
55 1SAY PYR 0.01566 0.4101 2.77008
56 1G6O ADP 0.0002479 0.49163 2.82486
57 3B7G ANP 0.0009063 0.46988 2.82486
58 1H82 FAD 0.0003652 0.44109 2.82486
59 1H82 GZZ 0.0004322 0.44109 2.82486
60 2PEZ DAT 0.0005625 0.44033 2.82486
61 3BW2 FMN 0.0001142 0.42825 2.82486
62 1RM4 NDP 0.001159 0.42581 2.82486
63 2A2X NA9 0.002132 0.4087 2.82486
64 1ZK4 AC0 0.00747 0.40815 2.82486
65 1ZK4 NAP 0.00747 0.40815 2.82486
66 1A8S PPI 0.006833 0.40797 2.82486
67 1XVV CCQ 0.001289 0.40778 2.82486
68 1R6D DAU 0.003189 0.40635 2.82486
69 4IZC 1GZ 0.002978 0.40526 2.82486
70 3P4X ADP 0.00002283 0.40187 2.82486
71 1VE3 SAM 0.003333 0.40187 2.82486
72 4ASJ N6A 0.001304 0.40142 2.82486
73 3IP8 B85 0.02754 0.40103 2.82486
74 1R6D NAD 0.005159 0.40019 2.82486
75 1HDR NAD 0.00337 0.40306 2.86885
76 1F9V ADP 0.000003496 0.40477 3.17003
77 3F8C HT1 0.005611 0.42867 3.1746
78 2VOH CIT 0.008051 0.43721 3.18471
79 2XT3 ADP 0.0000007521 0.66448 3.38983
80 2OG2 MLI 0.000009583 0.58072 3.38983
81 3ZS9 ADP ALF 0.00003484 0.48544 3.38983
82 1WDA BAG 0.0002871 0.47213 3.38983
83 2JFV FLC 0.0009217 0.47059 3.38983
84 1IWE IMP 0.002202 0.46071 3.38983
85 2RGX AP5 0.0008353 0.44475 3.38983
86 4TSK NDP 0.0003218 0.44294 3.38983
87 4NTD FAD 0.0001327 0.43776 3.38983
88 1MZV AMP 0.001745 0.43414 3.38983
89 5FTB ANP 0.01447 0.43404 3.38983
90 5FHD ADP ALF 0.00905 0.43086 3.38983
91 1I9G SAM 0.0004231 0.42968 3.38983
92 1FL2 FAD 0.0003577 0.42657 3.38983
93 2C2A ADP 0.001212 0.42149 3.38983
94 1Y75 NAG 0.005022 0.42031 3.38983
95 3SHR CMP 0.004206 0.41869 3.38983
96 2GWH A3P 0.006991 0.41516 3.38983
97 1CKM GTP 0.007809 0.41229 3.38983
98 2NXW TPP 0.0006801 0.40773 3.38983
99 3JYN NDP 0.0008198 0.40661 3.38983
100 1BDB NAD 0.006742 0.40633 3.38983
101 1G8S MET 0.03075 0.40606 3.38983
102 2WA4 069 0.007023 0.40538 3.38983
103 1D6H COA 0.002706 0.40163 3.38983
104 4HA6 FAD 0.002748 0.40141 3.38983
105 4CCO OGA 0.01835 0.40106 3.38983
106 2EJU SAH 0.003593 0.40072 3.38983
107 4EBZ NAG NAG NAG NAG 0.03313 0.40068 3.38983
108 3P3N AKG 0.03021 0.40061 3.38983
109 4F8L GAL 0.01156 0.45579 3.44828
110 3RF4 FUN 0.01284 0.40777 3.44828
111 1EYE PMM 0.003963 0.41516 3.57143
112 2O66 FLC 0.01687 0.42222 3.7037
113 2IL4 COA 0.003375 0.43353 3.8835
114 1SS4 CIT 0.00007744 0.63304 3.92157
115 1SS4 GSH 0.0001532 0.5669 3.92157
116 2W58 ADP 0.000001413 0.66095 3.9548
117 2IYL GDP 0.000003062 0.59836 3.9548
118 3B9Q MLI 0.00003565 0.56245 3.9548
119 3MAG 3MA 0.0003713 0.52741 3.9548
120 3VX3 ADP 0.00006711 0.50171 3.9548
121 4YDS ATP 0.001794 0.50155 3.9548
122 2GDJ ANP 0.0005201 0.48723 3.9548
123 2PL3 ADP 0.0007991 0.48367 3.9548
124 1Z6T ADP 0.0003587 0.47393 3.9548
125 2BEK ATP 0.0003982 0.45862 3.9548
126 1EP2 FMN 0.000009672 0.45683 3.9548
127 1Y9Q MED 0.002959 0.44728 3.9548
128 4DYO SD4 0.001227 0.44585 3.9548
129 4R43 GDP 0.01256 0.44496 3.9548
130 4FWE FAD 0.0001562 0.44151 3.9548
131 1RZM E4P 0.00857 0.43199 3.9548
132 2GJN FMN 0.00007896 0.4318 3.9548
133 1Y42 TYR 0.003865 0.43027 3.9548
134 1RZM PEP 0.004824 0.42613 3.9548
135 1XX4 BAM 0.02204 0.42452 3.9548
136 2GJN NIS 0.0001104 0.41921 3.9548
137 3BFX A3P 0.004834 0.41887 3.9548
138 3K37 BCZ 0.003888 0.41702 3.9548
139 1JA9 NDP 0.003224 0.41622 3.9548
140 3NFZ 3NF 0.00373 0.41619 3.9548
141 4GBM A3P 0.003818 0.41333 3.9548
142 3SFI 3SF 0.00101 0.41224 3.9548
143 5VGR GDP 0.02922 0.41196 3.9548
144 4IOK ADP 0.002606 0.40814 3.9548
145 3FYH ADP 0.004883 0.40583 3.9548
146 4IOK XPO 0.001608 0.40522 3.9548
147 1QZZ SAM 0.00589 0.40427 3.9548
148 2IXB A2G 0.001605 0.40366 3.9548
149 4JK3 NAD 0.0006912 0.40314 3.9548
150 4A3R CIT 0.001309 0.40289 3.9548
151 4Q3S X7A 0.001056 0.40263 3.9548
152 2IXB NAD 0.000909 0.40249 3.9548
153 3DG6 MUC 0.006761 0.40198 3.9548
154 1EP2 ORO 0.001433 0.40043 3.9548
155 1SKQ GDP 0.00000000219 0.76778 4.51977
156 1GOJ ADP 0.000000253 0.69673 4.51977
157 4LPS GDP 0.00000003275 0.68603 4.51977
158 3WXM GTP 0.00000001811 0.59518 4.51977
159 1MKY GDP 0.00000000004779 0.56324 4.51977
160 2DPY ADP 0.0001396 0.52953 4.51977
161 1SVI GDP 0.00000000104 0.52312 4.51977
162 1KK1 GNP 0.000000001723 0.51929 4.51977
163 4WZ6 ATP 0.002383 0.49872 4.51977
164 3T34 GDP 0.00004442 0.49458 4.51977
165 2GK6 ADP 0.00219 0.46684 4.51977
166 3FWY ADP 0.000006709 0.45802 4.51977
167 2QV7 ADP 0.001007 0.42886 4.51977
168 3DC4 ADP 0.000001223 0.42472 4.51977
169 1I2B UPG 0.001492 0.41896 4.51977
170 1I2B NAD 0.001492 0.41896 4.51977
171 1I2B USQ 0.001492 0.41896 4.51977
172 1UJ2 C5P 0.001266 0.41593 4.51977
173 3DJL FAD 0.004545 0.41577 4.51977
174 1DAK ADP 0.000001879 0.41536 4.51977
175 1IYE PGU 0.0003594 0.41473 4.51977
176 1UJ2 ADP 0.001396 0.41418 4.51977
177 2O2C G6Q 0.002692 0.41301 4.51977
178 4L7I SAM 0.002157 0.41245 4.51977
179 2BIF SIN 0.00577 0.4111 4.51977
180 2BIF ANP 0.003367 0.41068 4.51977
181 1REO FAD 0.001081 0.4102 4.51977
182 4IXW IXW 0.009656 0.40844 4.51977
183 2Q1S NAI 0.00178 0.40749 4.51977
184 2ZO9 MLI 0.007606 0.40611 4.51977
185 1XKV ATP 0.0001221 0.40548 4.51977
186 2ZPA ADP 0.0003718 0.40524 4.51977
187 2EWM NAD 0.0007959 0.40424 4.51977
188 2AQJ FAD 0.005151 0.4039 4.51977
189 1KOL NAD 0.001399 0.40321 4.51977
190 3TO7 COA 0.001767 0.40234 4.51977
191 1U7Z PMT 0.001261 0.40087 4.51977
192 2PR5 FMN 0.001833 0.411 4.54545
193 4K30 NLG 0.01026 0.41199 5
194 3WYA GDP 0.0000000003439 0.79516 5.08475
195 4HI0 GDP 0.0000004846 0.59012 5.08475
196 1SQ5 ADP 0.00002109 0.54936 5.08475
197 3BFV ADP 0.0007753 0.5102 5.08475
198 1XE7 GUN 0.0009889 0.49425 5.08475
199 3QV9 QV7 0.0004967 0.4755 5.08475
200 2NVK FAD 0.0002727 0.43148 5.08475
201 3TFC PEP 0.004052 0.42939 5.08475
202 4LTN NAI 0.0006056 0.42659 5.08475
203 3NYQ AMP 0.0002031 0.42522 5.08475
204 1T10 F6P 0.006881 0.42472 5.08475
205 4M51 BEZ 0.01876 0.4216 5.08475
206 1GR0 NAD 0.002743 0.42114 5.08475
207 1RYI FAD 0.0007187 0.42017 5.08475
208 4L6C 0BT 0.0005112 0.41814 5.08475
209 3T31 DCQ 0.001954 0.41662 5.08475
210 3T31 FAD 0.001753 0.41662 5.08475
211 3FB4 AP5 0.004063 0.41434 5.08475
212 4LTN FMN 0.001276 0.41214 5.08475
213 1A5Z OXM 0.03079 0.41082 5.08475
214 4G87 UD1 0.001697 0.41057 5.08475
215 2BH9 NAP 0.003364 0.40941 5.08475
216 4OYA 1VE 0.01212 0.4083 5.08475
217 4JWX 1N4 0.01262 0.4081 5.08475
218 1RYI GOA 0.001726 0.40792 5.08475
219 3NYQ MCA 0.0008328 0.40504 5.08475
220 1SQ5 PAU 0.01524 0.40455 5.08475
221 3H4S ADP 0.000001103 0.40384 5.08475
222 2XVF FAD 0.00153 0.40317 5.08475
223 3TKA SAM 0.0001241 0.40262 5.08475
224 4FRZ ADP 0.000004542 0.4026 5.08475
225 2OYS FMN 0.0002106 0.40131 5.08475
226 5L3R GCP 0.001104 0.46698 5.31561
227 1BO4 COA 0.01105 0.42097 5.35714
228 2AWN ADP 0.0000001559 0.7283 5.64972
229 3NHB ADP 0.00001051 0.59628 5.64972
230 1G3Q ADP 0.00001431 0.55755 5.64972
231 1DAR GDP 0.00000001009 0.51348 5.64972
232 3Q9L ATP 0.00006167 0.50873 5.64972
233 2CK3 ANP 0.0004051 0.46691 5.64972
234 1FNN ADP 0.000439 0.46535 5.64972
235 5XDR ADP 0.005151 0.46144 5.64972
236 3OND NAD 0.00008291 0.45483 5.64972
237 3OND ADN 0.00008291 0.45483 5.64972
238 3IO3 ADP 0.00001781 0.45365 5.64972
239 2CK3 ADP 0.0004311 0.45314 5.64972
240 2FNA ADP 0.0006252 0.45023 5.64972
241 2ZTS ADP 0.001269 0.4448 5.64972
242 1KYQ NAD 0.0004333 0.43304 5.64972
243 4E03 ADP 0.00001737 0.4308 5.64972
244 3FPZ AHZ 0.002307 0.42615 5.64972
245 1V5F FAD 0.01132 0.42184 5.64972
246 1V5F TPP 0.01132 0.42184 5.64972
247 3JQ3 ADP 0.003742 0.42074 5.64972
248 4B9E FAH 0.01474 0.4207 5.64972
249 1ION ADP 0.0000549 0.41892 5.64972
250 3TN7 NJP 0.0002907 0.41753 5.64972
251 1TDF FAD 0.001278 0.41505 5.64972
252 3WE0 FAD 0.001132 0.41382 5.64972
253 1TDF NAP 0.004706 0.41176 5.64972
254 1E5F PLP 0.003121 0.41062 5.64972
255 1N1G BCP 0.0007572 0.41028 5.64972
256 1W0J ADP 0.0001312 0.40985 5.64972
257 1W0J ADP BEF 0.0003233 0.40953 5.64972
258 1XHL NDP 0.0006388 0.40856 5.64972
259 1B4P GPS 0.002207 0.40817 5.64972
260 3A4M ADP 0.000005346 0.40702 5.64972
261 4LHM AZZ 0.01825 0.4058 5.64972
262 2J7T 274 0.0005785 0.40546 5.64972
263 1DXY NAD 0.0005106 0.40387 5.64972
264 4E28 9MZ 0.02859 0.40173 5.64972
265 3B20 NAD 0.0005672 0.4 5.64972
266 1YOA FMN 0.009592 0.46038 5.66038
267 1YOA FAD 0.0003945 0.4218 5.66038
268 4DCT GDP 0.0000000001395 0.80138 6.21469
269 1WDT GTP 0.00000004667 0.64245 6.21469
270 4M5P MLA 0.00409 0.47129 6.21469
271 3KTA AP5 0.0006578 0.46658 6.21469
272 2BLE 5GP 0.0006616 0.43404 6.21469
273 2Q2Y ADP 0.001357 0.43385 6.21469
274 2Q2Y MKR 0.001284 0.43368 6.21469
275 2RHW C0E 0.0009049 0.43098 6.21469
276 1Q11 TYE 0.003991 0.42967 6.21469
277 3A1I UNU 0.002494 0.42788 6.21469
278 1FIQ SAL 0.0001933 0.42442 6.21469
279 3ZOD HQE 0.0001135 0.4232 6.21469
280 3ZOD FMN 0.0001135 0.4232 6.21469
281 2RDT FMN 0.00116 0.42261 6.21469
282 4M5P 23W 0.02005 0.42016 6.21469
283 3PVT 3HC 0.0005092 0.41815 6.21469
284 4MKG AP5 0.003479 0.4171 6.21469
285 3O03 NAP 0.002442 0.41337 6.21469
286 2V6O FAD 0.005122 0.41167 6.21469
287 3DAG FEG 0.0002339 0.41118 6.21469
288 2RDT 2RD 0.004398 0.41028 6.21469
289 1YBH FAD 0.001101 0.40994 6.21469
290 1OAA OAA 0.001501 0.40987 6.21469
291 3MPI GRA 0.002938 0.40834 6.21469
292 3CV2 OXL 0.03745 0.40553 6.21469
293 1NJR XYL 0.000355 0.40403 6.21469
294 1GXU 2HP 0.0002647 0.48743 6.59341
295 2CBZ ATP 0.0000009084 0.66799 6.77966
296 3EZ2 ADP 0.0000391 0.55061 6.77966
297 3UIE ANP 0.00008117 0.5147 6.77966
298 4PPF FLC 0.001555 0.51334 6.77966
299 2C04 GCP 0.0000746 0.50497 6.77966
300 5A2J ALA PRO ASP THR ARG PRO 0.001422 0.48157 6.77966
301 1F5N GNP 0.00013 0.46274 6.77966
302 2B8W ALF 5GP 0.0001459 0.44341 6.77966
303 1K6M AGS 0.0008149 0.44153 6.77966
304 3KJI ADP 0.00001868 0.43928 6.77966
305 1I0Z OXM 0.01529 0.43279 6.77966
306 3H86 AP5 0.001747 0.42338 6.77966
307 3OCZ SRA 0.001148 0.42234 6.77966
308 4KOA NDP 0.001396 0.41927 6.77966
309 1G5N UAP SGN IDS SGN 0.02482 0.41821 6.77966
310 1X6V ADP 0.001078 0.41757 6.77966
311 1S3G AP5 0.00358 0.41659 6.77966
312 4MKF AP5 0.004117 0.41515 6.77966
313 1B63 ANP 0.000639 0.41498 6.77966
314 3IU9 T07 0.002425 0.41423 6.77966
315 2Y7G AAE 0.003056 0.41096 6.77966
316 1DR1 HBI 0.001755 0.4013 6.77966
317 1DR1 NAP 0.001755 0.4013 6.77966
318 4DQ2 BTX 0.0008472 0.40049 6.77966
319 3UEC ALA ARG TPO LYS 0.001586 0.46698 6.84932
320 3QDY CBS 0.0005035 0.49074 6.99301
321 3QDY A2G GAL 0.005202 0.44933 6.99301
322 4QM7 GTP 0.00001537 0.4131 7.01754
323 1C1L GAL BGC 0.001911 0.46312 7.29927
324 3CNL GNP 0.000000003389 0.7581 7.34463
325 4P4T GDP 0.000002386 0.5663 7.34463
326 5GOE GDP 0.00003981 0.56617 7.34463
327 1FP6 ADP 0.00002409 0.53339 7.34463
328 4HSE ADP 0.00008183 0.5207 7.34463
329 1V6A TRE 0.0001146 0.5038 7.34463
330 4WZA ACP 0.00008052 0.5035 7.34463
331 4WZA ADP 0.00008197 0.50317 7.34463
332 1IHU AF3 0.00004895 0.49759 7.34463
333 1IHU ADP 0.00007114 0.486 7.34463
334 1YTM ATP 0.0004399 0.46094 7.34463
335 2Y6P CTP 0.0007465 0.44906 7.34463
336 3RLF ANP 0.001023 0.43738 7.34463
337 2X7I CIT 0.005236 0.4372 7.34463
338 1W3R PYR 0.009604 0.4361 7.34463
339 3O2K QRP 0.001781 0.43379 7.34463
340 1LTH NAD 0.0009602 0.42857 7.34463
341 3QXC ATP 0.001176 0.42475 7.34463
342 3I51 45C 0.002425 0.42354 7.34463
343 9LDT NAD 0.0004533 0.41167 7.34463
344 9LDB NAD 0.0005848 0.40831 7.34463
345 4KQL 1SG 0.005364 0.40468 7.34463
346 1Z45 NAD 0.0007727 0.40319 7.34463
347 3QF7 ANP 0.004567 0.40281 7.34463
348 3EE4 MYR 0.0002073 0.4006 7.34463
349 2V7Q ATP 0.00007733 0.5157 7.57576
350 2V7Q ADP 0.0002256 0.50531 7.57576
351 2OFE NAG 0.006624 0.43115 7.74648
352 4PTZ FMN 0.002065 0.41313 7.8534
353 4J0Q GDP 0.0000000002349 0.8173 7.9096
354 1D2E GDP 0.00000001118 0.6884 7.9096
355 1SVK ALF GDP 0.000000003978 0.64028 7.9096
356 2OM2 GDP 0.00000008101 0.62405 7.9096
357 1CS4 GSP 0.000000009536 0.62022 7.9096
358 1TAD GDP 0.00000001396 0.61632 7.9096
359 1BH2 GSP 0.00000002147 0.60899 7.9096
360 1AZT GSP 0.00000001153 0.60664 7.9096
361 3CX8 GSP 0.000000013 0.60476 7.9096
362 3VMF GTP 0.00000001566 0.59766 7.9096
363 1GP2 GDP 0.0000002507 0.58899 7.9096
364 1Y3A GDP 0.0000001083 0.55226 7.9096
365 3EC1 GDP 0.00000000595 0.5272 7.9096
366 3F81 STT 0.0003828 0.51549 7.9096
367 1H65 GDP 0.000009687 0.47377 7.9096
368 3BER AMP 0.005091 0.43781 7.9096
369 4GOX A3P 0.001014 0.43753 7.9096
370 1ZK7 FAD 0.0004151 0.42995 7.9096
371 2JBH 5GP 0.008117 0.41159 7.9096
372 2QEN ADP 0.0001957 0.40921 7.9096
373 4R33 SAH 0.0008381 0.40632 7.9096
374 4R33 TRP 0.0008381 0.40632 7.9096
375 2X61 CH 0.001251 0.40097 7.9096
376 3KJQ B94 0.001853 0.42813 8.42105
377 3DEF GDP 0.000001374 0.59123 8.47458
378 1ZCB GDP 0.00000007942 0.57109 8.47458
379 1PUJ GNP 0.000000005715 0.54853 8.47458
380 3AB3 GDP 0.0000001085 0.53818 8.47458
381 5BQ5 ADP BEF 0.002379 0.47458 8.47458
382 3DZD ADP 0.001228 0.45396 8.47458
383 3FVQ ATP 0.001007 0.44522 8.47458
384 1F1V DHY 0.00376 0.42556 8.47458
385 3RC3 ANP 0.01328 0.42118 8.47458
386 1LVG ADP 0.000001363 0.41963 8.47458
387 1E7S NAP 0.0006548 0.40823 8.47458
388 2PVQ GSH 0.004055 0.40254 8.47458
389 4MZ7 DTP 0.000907 0.40108 8.47458
390 4MZ7 DGT 0.000914 0.40098 8.47458
391 1O0S NAI 0.001392 0.40052 8.47458
392 1TV5 ORO 0.005349 0.40003 8.47458
393 1LVL FAD 0.003037 0.40001 8.47458
394 3NGU ADP 0.007398 0.40048 8.60927
395 4CVN ADP 0.000009848 0.58988 8.75912
396 1DRV A3D 0.003445 0.40188 8.79121
397 2Q37 3AL 0.003183 0.43964 8.83978
398 1FQJ GDP 0.0000002762 0.58722 8.84354
399 1FQK GDP 0.0000005615 0.57429 8.84354
400 1FQJ ALF 0.0001051 0.53934 8.84354
401 1FQK ALF 0.0007343 0.49295 8.84354
402 3U6B GDP 0.0000000001054 0.83509 8.88325
403 4G5G GDP 0.0000000003322 0.79591 8.88325
404 3U6K GDP 0.0000000005819 0.78378 8.88325
405 4P3Y GDP 0.0000000001288 0.54192 8.88325
406 2BVN GNP 0.0000000002685 0.76372 8.90585
407 1D8T GDP 0.0000000003349 0.54396 8.90585
408 1TQ4 GDP 0.00000001477 0.65632 9.03955
409 1WF3 GNP 0.0000000225 0.59855 9.03955
410 1JWY GDP 0.000001901 0.58467 9.03955
411 1JWY ADP 0.0001711 0.50512 9.03955
412 2GDZ NAD 0.0006308 0.40585 9.03955
413 3LZW FAD 0.001948 0.401 9.03955
414 4MOB COA 0.002003 0.40062 9.03955
415 1HTW ADP 0.00002223 0.42145 9.49367
416 4LC1 GDP 0.000000001818 0.75913 9.60452
417 2XTZ GSP 0.000000002457 0.62846 9.60452
418 2RCN GDP 0.0000000000241 0.57415 9.60452
419 1P9B GDP 0.0005323 0.46613 9.60452
420 3OIG NAD 0.0009165 0.42926 9.60452
421 4XGU ADP 0.01752 0.42309 9.60452
422 1Q3Q ANP 0.001933 0.41678 9.60452
423 4O8A FAD 0.0003638 0.41457 9.60452
424 2XK9 XK9 0.000651 0.41102 9.60452
425 2AEB ABH 0.0006311 0.41077 9.60452
426 4C12 ADP 0.002391 0.41051 9.60452
427 4H1V GNP 0.000001899 0.57753 10.1695
428 3MD0 GDP 0.0000000001692 0.54165 10.1695
429 5IRR GSP 0.000311 0.49641 10.1695
430 4LYA ATP 0.001927 0.48396 10.1695
431 1QO0 BMD 0.001064 0.46771 10.1695
432 1PEA ACM 0.002922 0.46175 10.1695
433 3HU3 AGS 0.0001742 0.45529 10.1695
434 1W5T ADP 0.002647 0.4344 10.1695
435 1W5T ANP 0.00182 0.434 10.1695
436 1ZZ7 S0H 0.007401 0.41811 10.1695
437 4KVA GTP 0.00005846 0.41269 10.1695
438 4IMG NGF 0.001537 0.40982 10.1695
439 1OS1 PYR 0.002916 0.40915 10.1695
440 1OS1 ATP 0.002915 0.40772 10.1695
441 1G0N PHH 0.0017 0.4061 10.1695
442 1G0N NDP 0.001457 0.40497 10.1695
443 2HCJ GDP 0.00000000008117 0.54573 10.4478
444 3TK1 GDP 0.0000000002366 0.52492 10.7345
445 2C9O ADP 0.0006425 0.45376 10.7345
446 2F2U M77 0.001863 0.43299 10.7345
447 1ME8 RVP 0.009909 0.40382 10.7345
448 2QN6 GDP 0.0000000001513 0.82706 11.2994
449 2ZR9 DTP 0.0002007 0.50784 11.2994
450 4KCT PYR 0.003266 0.42811 11.2994
451 2C5S AMP 0.00478 0.4212 11.2994
452 4KCT FDP 0.01472 0.41083 11.2994
453 3D3W NAP 0.001041 0.4007 11.2994
454 2JL1 NAP 0.00019 0.40045 11.2994
455 3PQC GDP 0.00000007207 0.65981 11.8644
456 1VHT BA3 0.001397 0.45592 11.8644
457 2Y7P SAL 0.009089 0.41426 11.8644
458 3GTD MLI 0.01686 0.40734 11.8644
459 1FW1 GSH 0.005888 0.40427 11.8644
460 4COQ SAN 0.00357 0.44353 12.4294
461 2OZE AGS 0.000135 0.42205 12.4294
462 2Q28 ADP 0.002298 0.40383 12.4294
463 1R27 MGD 0.001436 0.40286 12.4294
464 4WVH ASP HIS ASP ALA HIS ALA 0.01378 0.40196 12.4294
465 3S9K CIT 0.0005581 0.5328 12.7119
466 3LRE ADP 0.00000101 0.6612 12.9944
467 1T0S BML 0.0001897 0.52057 12.9944
468 3D2Y AH0 ALA FGA LYS 0.00001067 0.48958 12.9944
469 2IZ1 ATR 0.0005126 0.48231 12.9944
470 4IEE AGS 0.001308 0.47272 12.9944
471 2WZF BGC 0.01332 0.42772 12.9944
472 1Y63 ADP 0.000009288 0.57434 13.5593
473 2XTN GTP 0.000009687 0.52236 13.5593
474 1W7J ADP BEF 0.0001172 0.49605 13.5593
475 1OYY AGS 0.006688 0.43189 13.5593
476 3NOJ PYR 0.01566 0.40636 13.5593
477 2C78 GNP 0.000000001652 0.68904 14.1243
478 2C77 GNP 0.000000001661 0.59873 14.1243
479 1V8K ANP 0.00001147 0.56977 14.1243
480 2WHX ADP 0.00006614 0.55263 14.1243
481 1G41 ADP 0.0002141 0.49466 14.1243
482 4A4Z ANP 0.01137 0.42035 14.1243
483 4OI4 ATP 0.003994 0.41251 14.1243
484 2HF9 GSP 0.00000005966 0.64593 14.6893
485 1VDC FAD 0.0006866 0.42481 14.6893
486 3VM7 GLC 0.01741 0.42367 14.6893
487 3R7F CP 0.02681 0.41146 14.6893
488 4OHY ANP 0.0001865 0.46429 15.2542
489 3E70 GDP 0.000004245 0.44648 15.2542
490 4N02 FNR 0.001584 0.41644 15.2542
491 1Q0H FOM 0.001758 0.4096 15.2542
492 1Q0H NDP 0.002002 0.4096 15.2542
493 1H2B NAJ 0.001204 0.40148 15.2542
494 4B47 GDP 0.00000000005842 0.84817 15.427
495 2OBM ADP 0.0003095 0.51881 15.8192
496 3ZQ6 ADP ALF 0.00004083 0.47357 15.8192
497 1SB8 NAD 0.0004203 0.43178 15.8192
498 1SB8 UD2 0.0009905 0.4232 15.8192
499 3DER ALA LYS 0.001696 0.40835 15.8192
500 2IXE ATP 0.0008405 0.40363 15.8192
501 1ECM TSA 0.01187 0.40468 16.5138
502 1QHH ATP 0.01555 0.40966 16.5217
503 1ZUI SKM 0.0005631 0.44447 16.9492
504 3ZFD ANP 0.00001973 0.43056 16.9492
505 2FYU FDN 0.003505 0.40109 17.2727
506 2QCX PF1 0.003899 0.43571 17.5141
507 1C0I FAD 0.0009501 0.41827 17.5141
508 1C0I BE2 0.0009501 0.41827 17.5141
509 1NYT NAP 0.0003416 0.41253 17.5141
510 1YRB GDP 0.0000000002424 0.76579 18.0791
511 1P1M MET 0.001085 0.40749 18.6441
512 4BQS ADP 0.0000654 0.5321 18.75
513 5KDO GDP 0.0003945 0.49579 18.9189
514 1GOT GDP 0.0000001321 0.54319 19.1781
515 4QOS ADP 0.0005936 0.4736 19.209
516 1G7C 5GP 0.0000001366 0.66566 19.774
517 2V5E SCR 0.005076 0.46623 19.802
518 1B7T ADP 0.0005351 0.47574 19.8718
519 1KK8 BEF ADP 0.0003824 0.47266 20.1299
520 4TMZ GSP 0.0000000009105 0.69143 20.904
521 4NCN GTP 0.0000000007081 0.62906 20.904
522 1QF5 RPL 0.000001044 0.51693 20.904
523 1IN4 ADP 0.0004051 0.40283 20.904
524 2QZ4 ADP 0.0001432 0.40151 20.904
525 1G7S GDP 0.000000002678 0.73894 21.4689
526 3PLN U5P 0.002007 0.44253 22.5989
527 3FC4 EDO 0.0003968 0.43728 23.1638
528 2XDQ MGX 0.003621 0.46516 24.2938
529 1KTC NGA 0.001762 0.44496 24.8588
530 3WY9 GDP 0.0000000000888 0.83888 25
531 3DOE GTP 0.00000000009454 0.6618 25.4237
532 1KSH GDP 0.0000000001365 0.63347 25.4237
533 2QA1 FAD 0.0007651 0.41014 25.9887
534 4GOJ GNP 0.0000000003304 0.6328 29.3785
535 1FZQ GDP 0.0000000005194 0.54282 29.3785
536 3AQ4 GDP 0.000000002741 0.73845 30.5085
537 2GJ8 ALF GDP 0.00003027 0.5251 30.814
538 2A5F GTP 0.0000000007686 0.63848 30.8571
539 2QTV GNP 0.00000000497 0.60889 31.1377
540 4KAX GTP 0.0000000006392 0.62204 31.3609
541 2X77 GDP 0.0000000004983 0.77447 31.6384
542 1QD0 RR6 0.004145 0.41439 32.0312
543 2W83 GTP 0.0000000003523 0.70875 32.1212
544 3PCR GTP 0.0000000007249 0.69559 32.716
545 4M9Q GNP 0.0000000003848 0.71612 32.7684
546 3N5C GDP 0.000000001131 0.7694 33.3333
547 1MR3 G3D 0.000000001307 0.5438 33.3333
548 1O9U ADZ 0.000749 0.50047 33.3333
549 2FH5 GTP 0.0000000005686 0.7181 33.8983
550 2ZEJ GDP 0.00000124 0.53148 34.4633
551 2J59 GTP 0.0000000006187 0.69848 37.9518
552 3IIJ ADP 0.000000902 0.44618 38.4181
553 4V0K GDP 0.0000002223 0.58474 38.4615
554 4BAS GNP 0.00000000296 0.59878 40.113
555 1UPT GTP 0.0000000001952 0.64034 40.9357
556 5DI3 GNP 0.0000006986 0.62037 41.8079
557 3T12 GDP ALF 0.000000003081 0.67744 42.9379
558 3T1O GDP 0.0000000405 0.51602 42.9379
559 3T5G GDP 0.00000000001214 0.61289 46.3277
560 1TX4 ALF GDP 0.0000000001637 0.72273 47.4576
561 2GCO GNP 0.000000000006955 0.6561 47.4576
562 5JCP GDP ALF 0.0000007013 0.64098 47.4576
563 1CXZ GSP 0.0000000003464 0.63312 47.4576
564 2CJW GDP 0.000000000009843 0.87207 48.0226
565 4D0N GDP 0.0000000001237 0.55638 48.0226
566 3LXR GDP 0.0000000001922 0.78221 49.7175
567 3REF GDP 0.00000000006698 0.74863 49.7175
Pocket No.: 3; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found: 50
This union binding pocket(no: 3) in the query (biounit: 1s8f.bio1) has 28 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5L3W GDP 0.000007409 0.44674 None
2 4WOP CTP 0.00008853 0.43769 None
3 5KSP GDP 0.00000001394 0.51881 1.69492
4 4ZG4 VO4 ADP 0.00003758 0.45815 2.25989
5 2PEZ GGZ 0.0005625 0.44033 2.82486
6 2WOJ ADP ALF 0.00004364 0.47267 3.38983
7 4YS0 ADP 0.005272 0.42075 3.9548
8 5I34 GDP 0.00006596 0.41179 3.9548
9 2OFW ADX 0.0005546 0.44855 4.51977
10 5MVR ADP 0.00002963 0.41156 4.93827
11 5I0H ADP BEF 0.0000373 0.44698 5.08475
12 4RZ3 ADP 0.00003307 0.43736 5.08475
13 4ZKD GDP 0.00000001414 0.60633 5.64972
14 5L3S GNP 0.00001451 0.48011 6.21469
15 5J1J ANP 0.00004369 0.45646 6.21469
16 5L3V GDP 0.00000351 0.45586 6.21469
17 4IDN GNP 0.0008685 0.44412 6.21469
18 4V03 ADP 0.00001279 0.43279 6.21469
19 5G41 AP5 0.002016 0.43203 6.21469
20 4XTR ATP 0.00005979 0.45193 6.77966
21 4XVU ATP 0.00006055 0.4518 6.77966
22 4XTR ADP 0.00004763 0.43831 6.77966
23 4PFO ADP 0.0003386 0.43374 6.77966
24 2VB6 ADP BEF 0.0003155 0.42457 6.77966
25 5N69 ADP 0.0001281 0.41034 6.77966
26 1TAD ALF 0.00000001396 0.61632 7.9096
27 5IRN ADP 0.00006289 0.4172 7.9096
28 5H56 TYD 0.001403 0.42168 8.47458
29 5H56 ADP 0.001403 0.42168 8.47458
30 5JBQ GDP 0.0000000003515 0.54338 8.88325
31 4PC3 GDP 0.00000001264 0.54003 8.88325
32 5KSZ GCP 0.00000008652 0.50941 9.03955
33 2ODE ALF GDP 0.00000001014 0.62177 9.21986
34 5CK5 GDP 0.000000002288 0.51804 10.1695
35 5K5Z ANP 0.0001015 0.44983 10.7345
36 4RD0 GDP 0.0000000006743 0.62081 11.2994
37 4Q1A 2XZ 0.005617 0.45624 11.8644
38 4Q1A UDP 0.005617 0.45624 11.8644
39 4BQS K2Q 0.003779 0.41112 18.75
40 5FG3 GDP 0.00000000005252 0.55143 24.2938
41 4ZI2 GNP 0.0000000005362 0.62614 29.3785
42 5HCN GCP 0.000000001881 0.54455 29.9435
43 5M04 GDP 0.000000001054 0.52567 31.6384
44 5KUT GDP 0.000000001072 0.54418 34.4633
45 4YLG GDP 0.000000002579 0.56793 40.4624
46 5EE5 GTP 0.0000000001172 0.64749 41.5205
47 4XOI GTP 0.0000000001345 0.66634 46.8927
48 4XSH GSP 0.000000000002667 0.68222 47.4576
49 1OW3 GDP 0.000000001313 0.57815 47.4576
50 5HPY GDP 0.000000002017 0.57142 47.4576
Pocket No.: 4; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1s8f.bio4) has 19 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 1s8f.bio4) has 28 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found: 97
This union binding pocket(no: 6) in the query (biounit: 1s8f.bio2) has 19 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2ZE7 DST 0.003493 0.43545 None
2 2ZE7 AMP 0.01081 0.41067 None
3 1CR1 TTP 0.0001157 0.49523 2.25989
4 5LB3 ADP 0.00007968 0.46789 2.25989
5 1J99 AND 0.02035 0.40654 2.25989
6 2FAH GDP 0.0002748 0.47082 2.82486
7 1T8U A3P 0.005116 0.41921 2.82486
8 1T8U UAP SGN IDS SGN 0.01664 0.41716 2.82486
9 2J5V PCA 0.03212 0.4041 2.82486
10 3WQT ANP 0.01399 0.40066 2.82486
11 1RRC ADP 0.000001097 0.49227 3.38983
12 2VF7 ADP 0.0003237 0.45695 3.38983
13 1U0J ADP 0.000383 0.43736 3.38983
14 4R2I ANP 0.0009857 0.41954 3.38983
15 5EP2 AZU 0.006249 0.41519 3.38983
16 4ITM ATP 0.01731 0.40097 3.38983
17 3BIB PSF 0.01255 0.40413 3.44828
18 5WRJ A3P 0.0008681 0.46061 3.9548
19 5WRI A3P 0.0008765 0.45664 3.9548
20 1R0X ATP 0.0004 0.43796 3.9548
21 1X9I G6Q 0.008166 0.4058 3.9548
22 2Y65 ADP 0.000001354 0.49153 4.51977
23 4P32 ADP 0.000228 0.48379 4.51977
24 2PZE ATP 0.000002203 0.48015 4.51977
25 3EWA ANP 0.00006413 0.47651 4.51977
26 1NY5 ADP 0.0002736 0.47338 4.51977
27 1OE0 TTP 0.001651 0.45088 4.51977
28 3TBK ANP 0.0002575 0.43776 4.51977
29 5MEX SZZ 0.0123 0.42166 4.51977
30 5MEX PAP 0.005094 0.4174 4.51977
31 2ZPT A3P 0.03122 0.41393 4.51977
32 1G3M PCQ 0.02303 0.40915 4.51977
33 1G3M A3P 0.02303 0.40915 4.51977
34 4D81 ADP 0.0000445 0.50665 5.08475
35 2KIN ADP 0.0000004098 0.48985 5.08475
36 1YQT ADP 0.000009731 0.4736 5.08475
37 1XX6 ADP 0.0008158 0.4294 5.08475
38 2D2F ADP 0.00006429 0.41054 5.08475
39 3QKT ANP 0.0002833 0.48343 5.64972
40 1QF9 C5P 0.0006672 0.48274 5.64972
41 1QF9 ALF 0.0006672 0.48274 5.64972
42 1QF9 ADP 0.0006672 0.48274 5.64972
43 2B8T THM 0.009281 0.40898 5.64972
44 1NST A3P 0.008596 0.405 5.64972
45 4KBF AMP 0.001558 0.4168 5.75342
46 1UKZ ADP 0.0004074 0.48914 6.21469
47 4KFU ACP 0.000007098 0.48286 6.21469
48 4TTQ ATP 0.00005766 0.48178 6.21469
49 2IS6 ADP 0.00007028 0.47532 6.21469
50 3BOS CDP 0.0001634 0.46004 6.21469
51 1XP8 AGS 0.0002832 0.44208 6.21469
52 1D6Z HY1 0.007985 0.42671 6.21469
53 4HUT ATP 0.01354 0.41153 6.21469
54 1F2U ATP 0.0005421 0.47379 6.71141
55 5TSH ANP 0.00002388 0.49525 6.77966
56 1R6B ADP 0.0001099 0.47812 6.77966
57 5TSH ADP 0.00002044 0.46601 6.77966
58 3DKP ADP 0.0001693 0.46205 6.77966
59 2D7D ADP 0.0005969 0.43857 6.77966
60 1YXM ADE 0.00498 0.42661 6.77966
61 2FSH ANP 0.0008451 0.42624 6.77966
62 1P72 ADP 0.03394 0.41955 6.77966
63 5MZN ADP 0.0008591 0.4192 6.77966
64 4IHQ ADP 0.00003058 0.48258 7.34463
65 4ZNL BEF ADP 0.0002147 0.4646 7.34463
66 4FCW ADP 0.0003257 0.45846 7.34463
67 4TMK T5A 0.002055 0.45503 7.34463
68 4LJ9 ACP 0.0006226 0.43641 7.34463
69 5LTJ ADP 0.00007887 0.48299 7.9096
70 5J1S ATP 0.0006721 0.46583 7.9096
71 5HR5 ADP 0.000229 0.4769 8.47458
72 2XAU ADP 0.0002043 0.47401 8.47458
73 3IUY AMP 0.002988 0.41574 8.47458
74 1BG2 ADP 0.0000003766 0.49177 9.03955
75 2F3R G5P 0.0035 0.44252 9.03955
76 1AQU A3P 0.008601 0.40499 9.60452
77 5IFS ADP 0.00008524 0.4911 10.1695
78 4JLV ADP 0.0001315 0.4588 10.1695
79 5M7P ADP 0.0002496 0.47756 10.7345
80 1KO8 6PG 0.00009757 0.49628 10.8571
81 4PX9 ADP 0.00003805 0.47788 11.2994
82 1QHG ATP 0.007626 0.40534 11.2994
83 2CE7 ADP 0.0000908 0.48986 11.8644
84 4PJ3 ANP 0.001826 0.43353 11.8644
85 1JJV ATP 0.00003725 0.46302 12.9944
86 1T5C ADP 0.000001053 0.47782 13.5593
87 4QRH 0O2 0.002175 0.43639 13.5593
88 1OFH ADP 0.0001603 0.47875 14.1243
89 1XMV ADP 0.0001694 0.4681 14.1243
90 2JLR ANP 0.0004048 0.46319 14.1243
91 5GJC ATP 0.0001284 0.46403 15.8192
92 5TIV A3P 0.01864 0.41749 15.8192
93 1NHX FTB 0.004141 0.45121 18.0791
94 1NHX PEP 0.004246 0.44969 18.0791
95 5H67 ATP 0.003543 0.41107 19.209
96 3ZIA ADP 0.00008951 0.4929 22.2222
97 3ZIA ATP 0.00005563 0.49048 22.2222
Pocket No.: 7; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found: 287
This union binding pocket(no: 7) in the query (biounit: 1s8f.bio5) has 19 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2BGM NAJ 0.00009228 0.50845 None
2 2GJ3 FAD 0.001563 0.43144 None
3 2FWP CIT 0.001829 0.42947 None
4 1H6W SER LEU ASN TYR ILE ILE LYS VAL LYS GLU 0.007737 0.42244 None
5 1T0I FMN 0.000998 0.42077 None
6 3Q3C NAD 0.01144 0.41729 None
7 2F01 BTN 0.02081 0.41353 None
8 2FWP ICR 0.008095 0.40897 None
9 3ZZS TRP 0.008727 0.40767 None
10 2F01 BTQ 0.03549 0.40347 None
11 1YOE RIB 0.00738 0.40328 None
12 1I36 NAP 0.004834 0.4029 None
13 3IIS PID 0.04279 0.40211 None
14 2PJL 047 0.0117 0.40095 None
15 1MOQ GLP 0.003631 0.40029 None
16 1R37 NAD 0.003827 0.42071 1.12994
17 2OWZ F6P 0.009441 0.41046 1.12994
18 2PWY SAH 0.00003098 0.48515 1.55039
19 2PT9 2MH 0.001076 0.44246 1.69492
20 2PT9 S4M 0.00071 0.43769 1.69492
21 3SJ7 NDP 0.001256 0.43296 1.69492
22 2QXX TTP 0.002283 0.43078 1.69492
23 2JAR UMP 0.0009646 0.42131 1.69492
24 2BNF UTP 0.00899 0.41032 1.69492
25 1V35 NAI 0.0135 0.40606 1.69492
26 2FFC U5P 0.00267 0.40517 1.69492
27 3CQ5 PMP 0.0006155 0.40434 1.69492
28 4IS0 GDS 0.003079 0.40085 1.69492
29 3O7B SAH 0.0003792 0.43611 2.25989
30 4MP8 MLI 0.005249 0.41865 2.25989
31 4MP8 NAD 0.005249 0.41865 2.25989
32 3U4C NDP 0.003242 0.41708 2.25989
33 2E2R 2OH 0.005253 0.41528 2.25989
34 4DA6 GA2 0.01776 0.41069 2.25989
35 3ULK NDP 0.002919 0.4094 2.25989
36 3HPF GAE 0.01014 0.40508 2.25989
37 4QN7 G39 0.01092 0.4038 2.25989
38 2DKH FAD 0.0001393 0.47601 2.82486
39 2DKH 3HB 0.0002217 0.47601 2.82486
40 1SOW NAD 0.001811 0.43098 2.82486
41 4K5S PM0 0.005741 0.42741 2.82486
42 4K5S FAD 0.002409 0.42741 2.82486
43 4E13 NAD 0.0008523 0.4274 2.82486
44 3I0O SMI 0.005769 0.4102 2.82486
45 2XBN PMP 0.003827 0.40991 2.82486
46 4I9A NCN 0.005727 0.40753 2.82486
47 4C25 13P 0.006844 0.40454 2.82486
48 3RHZ UDP 0.003578 0.40052 2.82486
49 4KCF AKM 0.0008174 0.46338 3.38983
50 1RP0 AHZ 0.01092 0.42742 3.38983
51 2IMP NAI 0.01524 0.42551 3.38983
52 4B8V NDG NAG NAG NAG 0.00181 0.42384 3.38983
53 1KGQ SCO 0.01844 0.42083 3.38983
54 2YYJ FAD 0.02099 0.42037 3.38983
55 2YYJ 4HP 0.02099 0.42037 3.38983
56 3ZY6 GFB 0.001327 0.42029 3.38983
57 4W6Z 8ID 0.004535 0.42009 3.38983
58 3DCM SAM 0.001512 0.41623 3.38983
59 3V91 UPG 0.01214 0.41311 3.38983
60 1KGQ NPI 0.02736 0.41251 3.38983
61 4O1M NAD 0.005379 0.40992 3.38983
62 4CKU P2F 0.01545 0.40876 3.38983
63 2R40 EPH 0.00625 0.40804 3.38983
64 1UZN NAP 0.001996 0.40546 3.38983
65 3FSY SCA 0.01176 0.4041 3.38983
66 4KCF FMN 0.002299 0.40325 3.38983
67 3KMZ EQO 0.006318 0.4031 3.38983
68