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Receptor
PDB id Resolution Class Description Source Keywords
1YZL 1.85 Å NON-ENZYME: TRANSPORT GPPNHP-BOUND RAB9 GTPASE MUS MUSCULUS RAB GTPASE RAB9 VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNIT RABENOSYN-5. NATURE V. 436 415 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:400;
Valid;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:401;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1S8F 1.77 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF RAB9 COMPLEXED TO GDP REVEALS A DIMER WITH AN ACTIVE CONFORMATION OF SWITCH II CANIS LUPUS FAMILIARIS INTRACELLULAR TRANSPORT VESICULAR TRAFFICKING HEMIHEDRAL TWINNING PROTEIN TRANSPORT
Ref.: CRYSTAL STRUCTURE OF RAB9 COMPLEXED TO GDP REVEALS A DIMER WITH AN ACTIVE CONFORMATION OF SWITCH II. FEBS LETT. V. 568 23 2004
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (274)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKR - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
18 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
22 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 6ARK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 5VPZ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
27 6F76 - CVK C24 H26 N2 O3 CN(C)Cc1cc....
28 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
29 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
31 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
32 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5OCO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
34 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 5VP7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
38 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
40 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 5VBM - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
43 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
45 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
54 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
55 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
58 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
59 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5VQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
62 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5VPY - 9GM C10 H17 N6 O13 P3 c1nc2c(n1[....
67 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
68 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
71 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 5VQ6 - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
73 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
78 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
81 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 5UK9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 6ASE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
86 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
88 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
90 5VQ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
92 5VPI - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
93 5W22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
94 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
96 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
98 6BP1 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
99 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
101 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
102 5VBZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
107 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
108 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
109 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
112 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
113 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
114 5VQ8 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 6B0Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
117 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
118 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
119 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
123 5OCT - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
124 5VBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
128 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
130 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
134 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
135 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
138 6B0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
141 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
142 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
143 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
144 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
147 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
150 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
151 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
152 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
153 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
154 5VQ2 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
155 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
156 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
157 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
158 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 5WHD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
163 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
164 5V9U - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
165 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
168 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
170 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
171 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
172 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
174 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
175 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
178 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
179 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
181 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
183 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
185 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
186 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
187 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
188 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
189 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
190 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
191 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
192 1N6K - GDP AF3 n/a n/a
193 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
194 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
197 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
201 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
203 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
207 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
208 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
209 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
210 5OCG - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
211 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
214 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
215 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
216 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
221 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
225 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
227 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
228 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
229 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
230 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
231 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
232 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
234 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
235 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
236 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
237 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
238 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
239 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
241 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
242 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
243 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
244 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
245 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
247 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
248 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
249 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
250 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
251 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
252 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
253 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
254 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
255 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
256 5A0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
257 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
258 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
259 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
260 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
261 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
262 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
263 5XC5 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
264 5XC3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
265 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
266 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
267 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
268 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
269 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
270 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
271 6BSX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
272 5YXH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
273 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
274 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 132
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 9GM 1 1
3 GDP 0.839506 0.973684
4 GP3 0.82716 0.948718
5 GTP 0.809524 0.973684
6 GNH 0.807229 0.986842
7 G1R 0.77907 0.961039
8 GCP 0.77907 0.948718
9 GSP 0.770115 0.925
10 5GP 0.756098 0.960526
11 G 0.756098 0.960526
12 G2R 0.747253 0.936709
13 GMV 0.747126 0.948718
14 GAV 0.714286 0.936709
15 GP2 0.712644 0.936709
16 G2P 0.711111 0.936709
17 Y9Z 0.708333 0.880952
18 GDC 0.690722 0.936709
19 GDD 0.690722 0.936709
20 GKE 0.690722 0.936709
21 G5P 0.686869 0.948718
22 GPG 0.684211 0.936709
23 GTG 0.683673 0.91358
24 GDR 0.683673 0.936709
25 GFB 0.683673 0.936709
26 JB2 0.68 0.936709
27 GKD 0.68 0.936709
28 6CK 0.676768 0.91358
29 G3A 0.676768 0.948718
30 GDX 0.673267 0.948718
31 ALF 5GP 0.67033 0.86747
32 YGP 0.663265 0.879518
33 GPD 0.656863 0.902439
34 ALF GDP 0.645833 0.86747
35 GDP AF3 0.645833 0.86747
36 GDP ALF 0.645833 0.86747
37 JB3 0.641509 0.925
38 DBG 0.640351 0.974359
39 G3D 0.638298 0.960526
40 G4P 0.625 0.960526
41 GMP 0.621951 0.857143
42 NGD 0.62037 0.936709
43 GGM 0.618182 0.925926
44 0O2 0.616162 0.960526
45 2MD 0.603604 0.870588
46 CAG 0.60177 0.904762
47 U2G 0.590909 0.91358
48 FEG 0.590909 0.858824
49 GDP 7MG 0.590476 0.888889
50 MGD 0.587719 0.870588
51 G G 0.586538 0.924051
52 ZGP 0.585586 0.848837
53 CG2 0.580357 0.91358
54 ANP 0.568421 0.922078
55 PGD 0.567797 0.902439
56 MD1 0.567797 0.870588
57 3GP 0.56044 0.922078
58 TPG 0.558333 0.822222
59 GH3 0.55 0.948052
60 FE9 0.546219 0.778947
61 GPX 0.539216 0.922078
62 G4M 0.539062 0.860465
63 DGI 0.536082 0.9
64 BGO 0.535088 0.901235
65 IDP 0.53125 0.947368
66 DGT 0.53 0.9
67 2GP 0.526882 0.935065
68 G1R G1R 0.520325 0.901235
69 GCP G 0.518868 0.897436
70 A G 0.516949 0.911392
71 U A G G 0.512605 0.911392
72 G A A A 0.504202 0.9
73 AGO 0.504202 0.91358
74 P2G 0.5 0.860759
75 G1G 0.5 0.902439
76 R7I 0.49505 0.922078
77 MGP 0.49505 0.936709
78 R5I 0.49505 0.922078
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 AKW 0.483051 0.869048
83 DG 0.474227 0.8875
84 DGP 0.474227 0.8875
85 G U 0.466667 0.878049
86 IMP 0.463918 0.934211
87 G2Q 0.462963 0.936709
88 GPC 0.459677 0.858824
89 G C 0.459016 0.878049
90 GTA 0.448276 0.91358
91 G7M 0.444444 0.924051
92 MAP 0.439252 0.898734
93 G G G RPC 0.435484 0.853659
94 B4P 0.434343 0.871795
95 AP5 0.434343 0.871795
96 ADP 0.434343 0.896104
97 A2D 0.43299 0.871795
98 AT4 0.43 0.8625
99 G G G C 0.426357 0.890244
100 AU1 0.425743 0.922078
101 SGP 0.425743 0.807229
102 BA3 0.424242 0.871795
103 A G C C 0.423077 0.888889
104 35G 0.423077 0.909091
105 PCG 0.423077 0.909091
106 C2E 0.423077 0.897436
107 APC G U 0.421875 0.864198
108 HEJ 0.421569 0.896104
109 ATP 0.421569 0.896104
110 ACQ 0.419048 0.873418
111 5GP 5GP 0.419048 0.860759
112 5FA 0.417476 0.896104
113 AQP 0.417476 0.896104
114 01G 0.417391 0.880952
115 AN2 0.415842 0.909091
116 UNP 0.415842 0.810127
117 6AD 0.415094 0.821429
118 M33 0.411765 0.860759
119 ITT 0.411765 0.846154
120 G C C C 0.410448 0.901235
121 HFD 0.409524 0.851852
122 G U34 0.408 0.86747
123 ACP 0.407767 0.873418
124 6YZ 0.407407 0.873418
125 AR6 0.403846 0.871795
126 APR 0.403846 0.871795
127 DG DG 0.403509 0.845238
128 A4P 0.403226 0.848837
129 UCG 0.402985 0.888889
130 SAP 0.4 0.851852
131 AGS 0.4 0.851852
132 AD9 0.4 0.873418
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: 505
This union binding pocket(no: 1) in the query (biounit: 1s8f.bio3) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 5L3W GDP None
2 1NJF ADP None
3 1NJF AGS None
4 1NN5 ANP None
5 1NN5 2DT None
6 4WOP CTP None
7 4AG5 ADP None
8 2ZE7 DST None
9 2ZE7 AMP None
10 1M7G ADX 1.12994
11 1M7G ADP 1.12994
12 1M7G AV2 1.12994
13 2YOH WMJ 1.12994
14 4JZ8 CIT 1.12994
15 5KSP GDP 1.69492
16 5GVR LMR 1.69492
17 2VVG ADP 1.69492
18 2CHG ANP 1.69492
19 1Z83 AP5 1.69492
20 3FKQ ATP 2.25989
21 2NCD ADP 2.25989
22 4ZG4 VO4 ADP 2.25989
23 1CR1 TTP 2.25989
24 5LB3 ADP 2.25989
25 1J99 AND 2.25989
26 2XWL CTP 2.25989
27 1I0B PEL 2.25989
28 5H4S RAM 2.25989
29 5H7K GDP 2.82486
30 5U32 GDP 2.82486
31 2PEZ DAT 2.82486
32 2PEZ GGZ 2.82486
33 3P4X ADP 2.82486
34 1G6O ADP 2.82486
35 2FAH GDP 2.82486
36 3B7G ANP 2.82486
37 2J5V PCA 2.82486
38 1Q20 PLO 2.82486
39 1Q20 A3P 2.82486
40 1T8U A3P 2.82486
41 1T8U UAP SGN IDS SGN 2.82486
42 2V2V V12 2.82486
43 3MGB PAP 2.82486
44 3WQT ANP 2.82486
45 5ZI9 FLC 2.82486
46 1F9V ADP 3.17003
47 3ZS9 ADP ALF 3.38983
48 2WOJ ADP ALF 3.38983
49 1IWE IMP 3.38983
50 2RGX AP5 3.38983
51 2XT3 ADP 3.38983
52 5FHD ADP ALF 3.38983
53 1RRC ADP 3.38983
54 5FTB ANP 3.38983
55 1U0J ADP 3.38983
56 4R2I ANP 3.38983
57 5EP2 AZU 3.38983
58 2OG2 MLI 3.38983
59 4HA6 FAD 3.38983
60 2GWH A3P 3.38983
61 3BIB PSF 3.44828
62 2IL4 COA 3.8835
63 5W7Q GDP 3.9548
64 2W58 ADP 3.9548
65 2IYL GDP 3.9548
66 3VX3 ADP 3.9548
67 1Z6T ADP 3.9548
68 6A20 ADP 3.9548
69 5I34 GDP 3.9548
70 5ZBR ANP 3.9548
71 2BEK ATP 3.9548
72 2GKS ADP 3.9548
73 3FYH ADP 3.9548
74 4YDS ATP 3.9548
75 2QQ0 THM 3.9548
76 2QQ0 ANP 3.9548
77 4R43 GDP 3.9548
78 2QQ0 ADP 3.9548
79 2QQ0 TMP 3.9548
80 4GBM A3P 3.9548
81 5VGR GDP 3.9548
82 5WRJ A3P 3.9548
83 4IOK XPO 3.9548
84 4IOK ADP 3.9548
85 5WRI A3P 3.9548
86 2GDJ ANP 3.9548
87 2PL3 ADP 3.9548
88 4YS0 ADP 3.9548
89 1R0X ATP 3.9548
90 3BFX A3P 3.9548
91 3B9Q MLI 3.9548
92 5E5U MLI 3.9548
93 2JJK R15 3.9548
94 3KC1 2T6 3.9548
95 1X9I G6Q 3.9548
96 1MKY GDP 4.51977
97 1SKQ GDP 4.51977
98 1SVI GDP 4.51977
99 3WXM GTP 4.51977
100 4LPS GDP 4.51977
101 1KK1 GNP 4.51977
102 3FWY ADP 4.51977
103 3T34 GDP 4.51977
104 2OFW ADX 4.51977
105 1UJ2 ADP 4.51977
106 1UJ2 C5P 4.51977
107 1GOJ ADP 4.51977
108 1XKV ATP 4.51977
109 5BN3 ADP 4.51977
110 2Y65 ADP 4.51977
111 6B8B ADP 4.51977
112 3DC4 ADP 4.51977
113 1DAK DPU 4.51977
114 1DAK ADP 4.51977
115 2BIF ANP 4.51977
116 2BIF SIN 4.51977
117 2PZE ATP 4.51977
118 3EWA ANP 4.51977
119 1NY5 ADP 4.51977
120 4WZ6 ATP 4.51977
121 2GK6 ADP 4.51977
122 2DPY ADP 4.51977
123 2ZPA ADP 4.51977
124 1OE0 TTP 4.51977
125 3TBK ANP 4.51977
126 6C90 ADP 4.51977
127 5MEX SZZ 4.51977
128 1G3M PCQ 4.51977
129 1G3M A3P 4.51977
130 5MEX PAP 4.51977
131 5LLB 6YZ 4.51977
132 2ZPT A3P 4.51977
133 5Z21 OXM 4.51977
134 3EVF GTA 4.51977
135 3QVV 3QV 4.51977
136 3QVV A3P 4.51977
137 5MVR ADP 4.93827
138 3WYA GDP 5.08475
139 4HI0 GDP 5.08475
140 4RZ3 ADP 5.08475
141 1SQ5 ADP 5.08475
142 3BFV ADP 5.08475
143 4NE2 ADP 5.08475
144 4NE2 SH2 5.08475
145 3H4S ADP 5.08475
146 4D81 ADP 5.08475
147 4FRZ ADP 5.08475
148 3TMK T5A 5.08475
149 3FB4 AP5 5.08475
150 5I0H ADP BEF 5.08475
151 5EXT ADP 5.08475
152 2KIN ADP 5.08475
153 1YQT ADP 5.08475
154 6DEF GCP 5.08475
155 1XX6 ADP 5.08475
156 3L6C MLI 5.08475
157 1VKJ A3P 5.08475
158 2D2F ADP 5.08475
159 6AIC AMP 5.08475
160 5L3R GCP 5.31561
161 1BO4 COA 5.35714
162 4ZKD GDP 5.64972
163 1DAR GDP 5.64972
164 3IO3 ADP 5.64972
165 1G3Q ADP 5.64972
166 2FNA ADP 5.64972
167 4E03 ADP 5.64972
168 6CS8 F9Y 5.64972
169 1ION ADP 5.64972
170 3A4M ADP 5.64972
171 1W0J ADP 5.64972
172 2CK3 ANP 5.64972
173 3Q9L ATP 5.64972
174 2AWN ADP 5.64972
175 3NHB ADP 5.64972
176 3QKT ANP 5.64972
177 1QF9 C5P 5.64972
178 1QF9 ADP 5.64972
179 1QF9 ALF 5.64972
180 2ZTS ADP 5.64972
181 2CK3 ADP 5.64972
182 5XDR ADP 5.64972
183 1W0J ADP BEF 5.64972
184 5H68 AGS 5.64972
185 1SVM ATP 5.64972
186 1FNN ADP 5.64972
187 4YJ1 ADP 5.64972
188 5C9P FUC 5.64972
189 2B8T THM 5.64972
190 4B9E FAH 5.64972
191 1NST A3P 5.64972
192 4KBF AMP 5.75342
193 4DCT GDP 6.21469
194 1WDT GTP 6.21469
195 5L3V GDP 6.21469
196 5L3S GNP 6.21469
197 4KFU ACP 6.21469
198 5J1J ANP 6.21469
199 4V03 ADP 6.21469
200 5G3Y ADP 6.21469
201 5G41 AP5 6.21469
202 1ZIN AP5 6.21469
203 2Q2Y MKR 6.21469
204 2Q2Y ADP 6.21469
205 4MKG AP5 6.21469
206 1AKY AP5 6.21469
207 1UKZ ADP 6.21469
208 4TTQ ATP 6.21469
209 2IS6 ADP 6.21469
210 3KTA AP5 6.21469
211 4IDN GNP 6.21469
212 3BOS CDP 6.21469
213 1XP8 AGS 6.21469
214 2O0J ADP 6.21469
215 1D6Z HY1 6.21469
216 4HUT ATP 6.21469
217 6H5E ANP 6.21469
218 1GXU 2HP 6.59341
219 1F2U ATP 6.71141
220 1DCP HBI 6.73077
221 1RJ9 GCP 6.77966
222 3KJI ADP 6.77966
223 4XTR ADP 6.77966
224 4XTR ATP 6.77966
225 4XVU ATP 6.77966
226 3UIE ANP 6.77966
227 2VB6 ADP BEF 6.77966
228 4PFO ADP 6.77966
229 5AK0 8V1 6.77966
230 1S3G AP5 6.77966
231 1X6V ADP 6.77966
232 1K6M AGS 6.77966
233 4MKF AP5 6.77966
234 4NU0 AP5 6.77966
235 5N69 ADP 6.77966
236 3EZ2 ADP 6.77966
237 2CBZ ATP 6.77966
238 3H86 AP5 6.77966
239 5TSH ANP 6.77966
240 1R6B ADP 6.77966
241 1F5N GNP 6.77966
242 2QG6 NMN 6.77966
243 5TSH ADP 6.77966
244 3DKP ADP 6.77966
245 2B8W ALF 5GP 6.77966
246 4PPF FLC 6.77966
247 2D7D ADP 6.77966
248 1YXM ADE 6.77966
249 2FSH ANP 6.77966
250 5MZN ADP 6.77966
251 5AHO TLA 6.77966
252 1P72 ADP 6.77966
253 5BYK A3P 6.77966
254 5BYK OAQ 6.77966
255 4QM7 GTP 7.01754
256 5GOE GDP 7.34463
257 5W76 GDP 7.34463
258 3CNL GNP 7.34463
259 4P4T GDP 7.34463
260 4WZA ACP 7.34463
261 1IHU ADP 7.34463
262 1IHU AF3 7.34463
263 4WZA ADP 7.34463
264 1FP6 ADP 7.34463
265 4HSE ADP 7.34463
266 2CDN ADP 7.34463
267 1YTM ATP 7.34463
268 3QXC ATP 7.34463
269 4BFW ZVW 7.34463
270 4IHQ ADP 7.34463
271 3RLF ANP 7.34463
272 3QF7 ANP 7.34463
273 1XEX ATP 7.34463
274 4ZNL BEF ADP 7.34463
275 5Z69 AGS 7.34463
276 4FCW ADP 7.34463
277 4TMK T5A 7.34463
278 4LJ9 ACP 7.34463
279 2X7I CIT 7.34463
280 2V7Q ATP 7.57576
281 2V7Q ADP 7.57576
282 1SVK ALF GDP 7.9096
283 6CRK GDP 7.9096
284 6AU6 GDP 7.9096
285 2OM2 GDP 7.9096
286 3CX8 GSP 7.9096
287 1GP2 GDP 7.9096
288 1TAD ALF 7.9096
289 1TAD GDP 7.9096
290 1Y3A GDP 7.9096
291 3VMF GTP 7.9096
292 1D2E GDP 7.9096
293 4J0Q GDP 7.9096
294 1BH2 GSP 7.9096
295 3EC1 GDP 7.9096
296 1CS4 GSP 7.9096
297 1H65 GDP 7.9096
298 5IRN ADP 7.9096
299 2QEN ADP 7.9096
300 4GOX A3P 7.9096
301 5LTJ ADP 7.9096
302 5J1S ATP 7.9096
303 5LTJ BEF 7.9096
304 2A2C NG1 7.9096
305 2A2C ADP 7.9096
306 3WDM ADN 7.9096
307 3BER AMP 7.9096
308 1ZCB GDP 8.47458
309 1PUJ GNP 8.47458
310 3AB3 GDP 8.47458
311 1LVG ADP 8.47458
312 3DEF GDP 8.47458
313 5BQ5 ADP BEF 8.47458
314 3FVQ ATP 8.47458
315 3DZD ADP 8.47458
316 5HR5 ADP 8.47458
317 2XAU ADP 8.47458
318 6FAA ADP 8.47458
319 3IUY AMP 8.47458
320 3RC3 ANP 8.47458
321 4CVN ADP 8.75912
322 1FQK GDP 8.84354
323 1FQJ GDP 8.84354
324 3U6B GDP 8.88325
325 4G5G GDP 8.88325
326 5JBQ GDP 8.88325
327 4P3Y GDP 8.88325
328 3U6K GDP 8.88325
329 4PC3 GDP 8.88325
330 1D8T GDP 8.90585
331 2BVN GNP 8.90585
332 1TQ4 GDP 9.03955
333 1WF3 GNP 9.03955
334 5KSZ GCP 9.03955
335 4X8O AP5 9.03955
336 1LVK MNT BEF 9.03955
337 5UIV ADP 9.03955
338 1BG2 ADP 9.03955
339 2F3R G5P 9.03955
340 5NM7 GLY 9.03955
341 2ODE ALF GDP 9.21986
342 1HTW ADP 9.49367
343 2RCN GDP 9.60452
344 2XTZ GSP 9.60452
345 4LC1 GDP 9.60452
346 4XGU ADP 9.60452
347 1P9B GDP 9.60452
348 4ZDJ UTP 9.60452
349 2OHH FMN 9.60452
350 1AQU A3P 9.60452
351 3MD0 GDP 10.1695
352 5CK5 GDP 10.1695
353 4KVA GTP 10.1695
354 5IRR GSP 10.1695
355 4H1V GNP 10.1695
356 4LYA ATP 10.1695
357 3HU3 AGS 10.1695
358 5IFS ADP 10.1695
359 1OS1 PYR 10.1695
360 1OS1 ATP 10.1695
361 4TL6 ANP 10.1695
362 1W5T ANP 10.1695
363 4JLV ADP 10.1695
364 1W5T ADP 10.1695
365 4UTG ANP 10.1695
366 2HCJ GDP 10.4478
367 3TK1 GDP 10.7345
368 5K5Z ANP 10.7345
369 6B4K ANP 10.7345
370 2C9O ADP 10.7345
371 5M7P ADP 10.7345
372 1KO8 6PG 10.8571
373 4RD0 GDP 11.2994
374 2QN6 GDP 11.2994
375 4PX9 ADP 11.2994
376 2ZR9 DTP 11.2994
377 1QHG ATP 11.2994
378 3PQC GDP 11.8644
379 4Q1A 2XZ 11.8644
380 4Q1A UDP 11.8644
381 5WC2 ADP 11.8644
382 2CE7 ADP 11.8644
383 5VHC BEF ADP 11.8644
384 1VHT BA3 11.8644
385 4PJ3 ANP 11.8644
386 5H7J GCP 12.4294
387 2OZE AGS 12.4294
388 1W4R TTP 12.4294
389 2ORV 4TA 12.4294
390 3ITJ CIT 12.4294
391 3LRE ADP 12.9944
392 1JJV ATP 12.9944
393 4IEE AGS 12.9944
394 5W75 GDP 13.5593
395 2XTN GTP 13.5593
396 1Y63 ADP 13.5593
397 1W7J ADP BEF 13.5593
398 1T5C ADP 13.5593
399 4QRH 0O2 13.5593
400 1OYY AGS 13.5593
401 2C78 GNP 14.1243
402 2C77 GNP 14.1243
403 2WHX ADP 14.1243
404 1V8K ANP 14.1243
405 1G41 ADP 14.1243
406 1OFH ADP 14.1243
407 1XMV ADP 14.1243
408 2JLR ANP 14.1243
409 4OI4 ATP 14.1243
410 4A4Z ANP 14.1243
411 2HF9 GSP 14.6893
412 3VM7 GLC 14.6893
413 3E70 GDP 15.2542
414 1E2K TMC 15.2542
415 4OHY ANP 15.2542
416 4B47 GDP 15.427
417 3ZQ6 ADP ALF 15.8192
418 2IXE ATP 15.8192
419 5Y6N ADP 15.8192
420 2OBM ADP 15.8192
421 5TIV A3P 15.8192
422 6G14 G4P 16.3842
423 1ZUI SKM 16.9492
424 3ZFD ANP 16.9492
425 5ZB0 ADP 17.5141
426 5ZB0 TYD 17.5141
427 1YRB GDP 18.0791
428 2GMV UN8 18.0791
429 1NHX FTB 18.0791
430 1NHX PEP 18.0791
431 2GMV PEP 18.0791
432 4BQS ADP 18.75
433 4BQS K2Q 18.75
434 5KDO GDP 18.9189
435 1GOT GDP 19.1781
436 4QOS ADP 19.209
437 5H67 ATP 19.209
438 1G7C 5GP 19.774
439 1B7T ADP 19.8718
440 1KK8 BEF ADP 20.1299
441 4NCN GTP 20.904
442 4TMZ GSP 20.904
443 1QF5 GDP 20.904
444 1QF5 RPL 20.904
445 1IN4 ADP 20.904
446 2QZ4 ADP 20.904
447 2JAQ DCP 20.904
448 1G7S GDP 21.4689
449 4UXH T5A 22.0339
450 3ZIA ATP 22.2222
451 3ZIA ADP 22.2222
452 5FG3 GDP 24.2938
453 3WY9 GDP 25
454 1KSH GDP 25.4237
455 3DOE GTP 25.4237
456 5XKT GNP 27.1186
457 4ZI2 GNP 29.3785
458 1FZQ GDP 29.3785
459 4GOJ GNP 29.3785
460 5BRT CH9 29.3785
461 5HCN GCP 29.9435
462 3AQ4 GDP 30.5085
463 2GJ8 ALF GDP 30.814
464 2A5F GTP 30.8571
465 2QTV GNP 31.1377
466 4KAX GTP 31.3609
467 2X77 GDP 31.6384
468 5M04 GDP 31.6384
469 2W83 GTP 32.1212
470 5ZXD ATP 32.2034
471 3PCR GTP 32.716
472 4M9Q GNP 32.7684
473 1MR3 G3D 33.3333
474 3N5C GDP 33.3333
475 2FH5 GTP 33.8983
476 5KUT GDP 34.4633
477 2ZEJ GDP 34.4633
478 5YT0 GDP 37.8531
479 2J59 GTP 37.9518
480 3IIJ ADP 38.4181
481 4V0K GDP 38.4615
482 4BAS GNP 40.113
483 4YLG GDP 40.4624
484 1UPT GTP 40.9357
485 5EE5 GTP 41.5205
486 5DI3 GNP 41.8079
487 3T12 GDP ALF 42.9379
488 3T1O GDP 42.9379
489 5YV5 ADP 44.4444
490 3T5G GDP 46.3277
491 4XOI GTP 46.8927
492 4XSH GSP 47.4576
493 1OW3 GDP 47.4576
494 5HPY GDP 47.4576
495 1TX4 ALF GDP 47.4576
496 1CXZ GSP 47.4576
497 2GCO GNP 47.4576
498 5JCP GDP ALF 47.4576
499 2CJW GDP 48.0226
500 6BCB GSP 48.0226
501 6BCA GSP 48.0226
502 4D0N GDP 48.0226
503 6BC0 GSP 48.0226
504 3LXR GDP 49.7175
505 3REF GDP 49.7175
Pocket No.: 2; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1s8f.bio3) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: 50
This union binding pocket(no: 3) in the query (biounit: 1s8f.bio3) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 3QX9 ATP None
2 2ZX2 RAM None
3 2VWT PYR 1.69492
4 4NSQ COA 1.69492
5 3MGB GHP 3MY 3FG GHP GHP OMY 3FG 2.82486
6 3GU3 SAH 2.82486
7 3IP8 B85 2.82486
8 2VOH CIT 3.18471
9 3FSY SCA 3.38983
10 6C0B MLI 3.38983
11 1FUR MLT 3.38983
12 5HWK BEZ 3.38983
13 1G8S MET 3.38983
14 3AB4 THR 3.38983
15 4EBZ NAG NAG NAG NAG 3.38983
16 1T3D CYS 3.46021
17 2O66 FLC 3.7037
18 4P86 5GP 3.9548
19 2ZJ5 ADP 3.9548
20 1APZ ASP 4.32099
21 4Y4V DAL 4.51977
22 2Z49 AMG 4.51977
23 1FLJ GSH 5.08475
24 4PZ6 GMP 5.08475
25 1ZX5 LFR 5.08475
26 5TED SKM 5.08475
27 4I7E PEP 5.08475
28 2B4B COA 5.84795
29 2ZUX RAM 6.21469
30 3CV2 OXL 6.21469
31 2VHJ ADP 6.21469
32 3BP1 GUN 6.77966
33 1G5N UAP SGN IDS SGN 6.77966
34 2QK4 ATP 6.77966
35 5N9X THR 7.34463
36 4PTN PYR 8.16327
37 3HQP FDP 8.47458
38 1FQJ ALF 8.84354
39 1FQK ALF 8.84354
40 2I4I AMP 9.03955
41 1ZGS XMM 9.60452
42 2Z5F A3P 9.60452
43 4KCT FDP 11.2994
44 2WZF BGC 12.9944
45 1NU4 MLA 13.4021
46 2BO4 FLC 13.5593
47 3R7F CP 14.6893
48 1QHH ATP 16.5217
49 4PSW COA 20.904
50 3UDG TMP 25.4237
Pocket No.: 4; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1s8f.bio3) has 28 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: 1
This union binding pocket(no: 5) in the query (biounit: 1s8f.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 3FIU POP 7.9096
Pocket No.: 6; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 1s8f.bio4) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 1s8f.bio4) has 28 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 1s8f.bio2) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 1s8f.bio5) has 19 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 1S8F; Ligand: GDP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 1s8f.bio5) has 19 residues
No: Leader PDB Ligand Sequence Similarity
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