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Receptor
PDB id Resolution Class Description Source Keywords
1YZU 2.5 Å NON-ENZYME: TRANSPORT GPPNHP-BOUND RAB21 GTPASE AT 2.50 A RESOLUTION HOMO SAPIENS RAB GTPASE RAB21 VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:301;
B:401;
Valid;
Valid;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG A:300;
B:400;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1Z08 1.8 Å NON-ENZYME: TRANSPORT GPPNHP-BOUND RAB21 Q53G MUTANT GTPASE HOMO SAPIENS RAB GTPASE RAB21 VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (274)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKR - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
18 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
22 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 6ARK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 5VPZ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
27 6F76 - CVK C24 H26 N2 O3 CN(C)Cc1cc....
28 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
29 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
31 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
32 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5OCO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
34 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
36 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 5VP7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
38 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
40 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
41 5VBM - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
43 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
45 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
47 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
49 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
54 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
55 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
57 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
58 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
59 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
61 5VQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
62 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5VPY - 9GM C10 H17 N6 O13 P3 c1nc2c(n1[....
67 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
68 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
71 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 5VQ6 - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
73 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
78 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
81 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 5UK9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
84 6ASE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
85 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
86 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
87 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
88 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
90 5VQ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
91 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
92 5VPI - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
93 5W22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
94 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
96 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
97 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
98 6BP1 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
99 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
101 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
102 5VBZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
104 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
107 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
108 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
109 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
112 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
113 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
114 5VQ8 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 6B0Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
117 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
118 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
119 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
123 5OCT - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
124 5VBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
126 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
127 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
128 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
130 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
133 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
134 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
135 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
138 6B0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
140 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
141 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
142 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
143 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
144 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
145 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
147 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
150 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
151 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
152 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
153 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
154 5VQ2 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
155 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
156 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
157 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
158 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 5WHD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
163 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
164 5V9U - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
165 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
168 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
170 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
171 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
172 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
174 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
175 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
178 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
179 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
181 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
183 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
185 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
186 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
187 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
188 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
189 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
190 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
191 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
192 1N6K - GDP AF3 n/a n/a
193 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
194 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
197 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
201 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
203 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
207 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
208 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
209 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
210 5OCG - 9R5 C9 H10 Cl N O2 c1cc2c(cc1....
211 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
214 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
215 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
216 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
221 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
225 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
227 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
228 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
229 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
230 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
231 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
232 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
234 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
235 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
236 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
237 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
238 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
239 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
241 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
242 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
243 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
244 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
245 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
247 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
248 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
249 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
250 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
251 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
252 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
253 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
254 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
255 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
256 5A0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
257 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
258 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
259 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
260 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
261 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
262 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
263 5XC5 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
264 5XC3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
265 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
266 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
267 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
268 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
269 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
270 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
271 6BSX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
272 5YXH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
273 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
274 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 132
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 9GM 1 1
3 GDP 0.839506 0.973684
4 GP3 0.82716 0.948718
5 GTP 0.809524 0.973684
6 GNH 0.807229 0.986842
7 G1R 0.77907 0.961039
8 GCP 0.77907 0.948718
9 GSP 0.770115 0.925
10 5GP 0.756098 0.960526
11 G 0.756098 0.960526
12 G2R 0.747253 0.936709
13 GMV 0.747126 0.948718
14 GAV 0.714286 0.936709
15 GP2 0.712644 0.936709
16 G2P 0.711111 0.936709
17 Y9Z 0.708333 0.880952
18 GDC 0.690722 0.936709
19 GDD 0.690722 0.936709
20 GKE 0.690722 0.936709
21 G5P 0.686869 0.948718
22 GPG 0.684211 0.936709
23 GTG 0.683673 0.91358
24 GDR 0.683673 0.936709
25 GFB 0.683673 0.936709
26 JB2 0.68 0.936709
27 GKD 0.68 0.936709
28 6CK 0.676768 0.91358
29 G3A 0.676768 0.948718
30 GDX 0.673267 0.948718
31 ALF 5GP 0.67033 0.86747
32 YGP 0.663265 0.879518
33 GPD 0.656863 0.902439
34 ALF GDP 0.645833 0.86747
35 GDP AF3 0.645833 0.86747
36 GDP ALF 0.645833 0.86747
37 JB3 0.641509 0.925
38 DBG 0.640351 0.974359
39 G3D 0.638298 0.960526
40 G4P 0.625 0.960526
41 GMP 0.621951 0.857143
42 NGD 0.62037 0.936709
43 GGM 0.618182 0.925926
44 0O2 0.616162 0.960526
45 2MD 0.603604 0.870588
46 CAG 0.60177 0.904762
47 U2G 0.590909 0.91358
48 FEG 0.590909 0.858824
49 GDP 7MG 0.590476 0.888889
50 MGD 0.587719 0.870588
51 G G 0.586538 0.924051
52 ZGP 0.585586 0.848837
53 CG2 0.580357 0.91358
54 ANP 0.568421 0.922078
55 PGD 0.567797 0.902439
56 MD1 0.567797 0.870588
57 3GP 0.56044 0.922078
58 TPG 0.558333 0.822222
59 GH3 0.55 0.948052
60 FE9 0.546219 0.778947
61 GPX 0.539216 0.922078
62 G4M 0.539062 0.860465
63 DGI 0.536082 0.9
64 BGO 0.535088 0.901235
65 IDP 0.53125 0.947368
66 DGT 0.53 0.9
67 2GP 0.526882 0.935065
68 G1R G1R 0.520325 0.901235
69 GCP G 0.518868 0.897436
70 A G 0.516949 0.911392
71 U A G G 0.512605 0.911392
72 G A A A 0.504202 0.9
73 AGO 0.504202 0.91358
74 P2G 0.5 0.860759
75 G1G 0.5 0.902439
76 R7I 0.49505 0.922078
77 MGP 0.49505 0.936709
78 R5I 0.49505 0.922078
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 AKW 0.483051 0.869048
83 DG 0.474227 0.8875
84 DGP 0.474227 0.8875
85 G U 0.466667 0.878049
86 IMP 0.463918 0.934211
87 G2Q 0.462963 0.936709
88 GPC 0.459677 0.858824
89 G C 0.459016 0.878049
90 GTA 0.448276 0.91358
91 G7M 0.444444 0.924051
92 MAP 0.439252 0.898734
93 G G G RPC 0.435484 0.853659
94 B4P 0.434343 0.871795
95 AP5 0.434343 0.871795
96 ADP 0.434343 0.896104
97 A2D 0.43299 0.871795
98 AT4 0.43 0.8625
99 G G G C 0.426357 0.890244
100 AU1 0.425743 0.922078
101 SGP 0.425743 0.807229
102 BA3 0.424242 0.871795
103 A G C C 0.423077 0.888889
104 35G 0.423077 0.909091
105 PCG 0.423077 0.909091
106 C2E 0.423077 0.897436
107 APC G U 0.421875 0.864198
108 HEJ 0.421569 0.896104
109 ATP 0.421569 0.896104
110 ACQ 0.419048 0.873418
111 5GP 5GP 0.419048 0.860759
112 5FA 0.417476 0.896104
113 AQP 0.417476 0.896104
114 01G 0.417391 0.880952
115 AN2 0.415842 0.909091
116 UNP 0.415842 0.810127
117 6AD 0.415094 0.821429
118 M33 0.411765 0.860759
119 ITT 0.411765 0.846154
120 G C C C 0.410448 0.901235
121 HFD 0.409524 0.851852
122 G U34 0.408 0.86747
123 ACP 0.407767 0.873418
124 6YZ 0.407407 0.873418
125 AR6 0.403846 0.871795
126 APR 0.403846 0.871795
127 DG DG 0.403509 0.845238
128 A4P 0.403226 0.848837
129 UCG 0.402985 0.888889
130 SAP 0.4 0.851852
131 AGS 0.4 0.851852
132 AD9 0.4 0.873418
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1Z08; Ligand: GNP; Similar sites found with APoc: 452
This union binding pocket(no: 1) in the query (biounit: 1z08.bio4) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 1JJV ATP None
2 5BQ5 ADP BEF None
3 1E2K TMC None
4 4WOP CTP None
5 1U3G ADP None
6 4PYA 2X3 None
7 1GXU 2HP None
8 3H86 AP5 None
9 4NU0 AP5 None
10 6AIC AMP None
11 4K7O EKZ None
12 1UO4 PIH None
13 3DCJ THH None
14 2RCN GDP 1.17647
15 4TL6 ANP 1.17647
16 5KUT GDP 1.76471
17 1T5C ADP 1.76471
18 5U32 GDP 1.76471
19 4ZNL BEF ADP 1.76471
20 1U0J ADP 1.76471
21 3DGY 2GP 2.06186
22 1M7G AV2 2.35294
23 1RRC ADP 2.35294
24 3BOS CDP 2.35294
25 4KBF AMP 2.35294
26 1M7G ADX 2.35294
27 5I34 GDP 2.35294
28 2QQ0 ANP 2.35294
29 1M7G ADP 2.35294
30 2QQ0 TMP 2.35294
31 2QQ0 ADP 2.35294
32 3UIE ANP 2.35294
33 3L8H FX1 2.35294
34 2QQ0 THM 2.35294
35 4V0K GDP 2.36686
36 6G14 G4P 2.94118
37 1GOJ ADP 2.94118
38 1SVI GDP 2.94118
39 1SQ5 ADP 2.94118
40 5BN3 ADP 2.94118
41 1XKV ATP 2.94118
42 5IFS ADP 2.94118
43 2B8W ALF 5GP 2.94118
44 4Q1A UDP 2.94118
45 4Q1A 2XZ 2.94118
46 2O0J ADP 2.94118
47 4DFU QUE 2.94118
48 1WRA PC 2.94118
49 6GSG RCO 2.94118
50 3HU3 AGS 2.94118
51 5ZI9 FLC 2.94118
52 5J1J ANP 3.15789
53 1BG2 ADP 3.52941
54 2DPY ADP 3.52941
55 5K5Z ANP 3.52941
56 2Q2Y MKR 3.52941
57 2Q2Y ADP 3.52941
58 2OFW ADX 3.52941
59 2ZPA ADP 3.52941
60 2PEZ DAT 3.52941
61 2PEZ GGZ 3.52941
62 1OS1 PYR 3.52941
63 1OS1 ATP 3.52941
64 3IUY AMP 3.52941
65 1YTM ATP 3.52941
66 3BER AMP 3.52941
67 6CB2 OLC 3.52941
68 3QVV A3P 3.52941
69 3AI8 HNQ 3.52941
70 4JAW GAL NGT 3.52941
71 5H68 AGS 3.52941
72 5W7Q GDP 4.11765
73 2OG2 MLI 4.11765
74 1MKY GDP 4.11765
75 3B9Q MLI 4.11765
76 5HCN GCP 4.11765
77 4E03 ADP 4.11765
78 2HF9 GSP 4.11765
79 4YDS ATP 4.11765
80 3EZ2 ADP 4.11765
81 3ZQ6 ADP ALF 4.11765
82 1XMV ADP 4.11765
83 1R0X ATP 4.11765
84 5GVR LMR 4.11765
85 5FTB ANP 4.11765
86 5FHD ADP ALF 4.11765
87 4IDN GNP 4.11765
88 3FVQ ATP 4.11765
89 4GOX A3P 4.11765
90 2BO4 FLC 4.11765
91 3TMK T5A 4.11765
92 1HTW ADP 4.43038
93 3U6B GDP 4.70588
94 4P3Y GDP 4.70588
95 3U6K GDP 4.70588
96 2BVN GNP 4.70588
97 4PC3 GDP 4.70588
98 1D8T GDP 4.70588
99 2HCJ GDP 4.70588
100 5JBQ GDP 4.70588
101 4G5G GDP 4.70588
102 3FWY ADP 4.70588
103 5YV5 ADP 4.70588
104 1YQT ADP 4.70588
105 4IHQ ADP 4.70588
106 2D2F ADP 4.70588
107 6C90 ADP 4.70588
108 2OZE AGS 4.70588
109 1G41 ADP 4.70588
110 5VGR GDP 4.70588
111 2FSH ANP 4.70588
112 1NHX FTB 4.70588
113 1NHX PEP 4.70588
114 1NY5 ADP 4.70588
115 5EXT ADP 4.70588
116 2GMV UN8 4.70588
117 2GMV PEP 4.70588
118 4PJ3 ANP 4.70588
119 1OFH ADP 4.70588
120 4BFW ZVW 4.70588
121 3MWL 8OX 4.70588
122 3DC4 ADP 4.94186
123 2PIE GLU LEU LYS TPO GLU ARG TYR 5.07246
124 3LRE ADP 5.29412
125 5GOE GDP 5.29412
126 1WDT GTP 5.29412
127 4WZA ACP 5.29412
128 4WZA ADP 5.29412
129 1FP6 ADP 5.29412
130 6DEF GCP 5.29412
131 4YJ1 ADP 5.29412
132 1NJF ADP 5.29412
133 1NJF AGS 5.29412
134 1Z6T ADP 5.29412
135 4R2I ANP 5.29412
136 1FNN ADP 5.29412
137 1Y63 ADP 5.29412
138 4LJ9 ACP 5.29412
139 1W5T ANP 5.29412
140 2YOH WMJ 5.29412
141 3QXC ATP 5.29412
142 1W5T ADP 5.29412
143 6FMC DUE 5.6962
144 4DCT GDP 5.88235
145 4LC1 GDP 5.88235
146 1LVG ADP 5.88235
147 3E70 GDP 5.88235
148 2PZE ATP 5.88235
149 4WZ6 ATP 5.88235
150 3NHB ADP 5.88235
151 2OBM ADP 5.88235
152 3Q9L ATP 5.88235
153 3B7G ANP 5.88235
154 2FNA ADP 5.88235
155 1ION ADP 5.88235
156 1G3Q ADP 5.88235
157 2CHG ANP 5.88235
158 5Z69 AGS 5.88235
159 2CFI ZZZ 5.88235
160 1ZIN AP5 5.88235
161 2NW9 FT6 5.88235
162 5UIJ TYD 5.88235
163 1ZUI SKM 5.95238
164 2IYL GDP 6.33803
165 3WYA GDP 6.47059
166 4KFU ACP 6.47059
167 4V03 ADP 6.47059
168 5WC2 ADP 6.47059
169 2WHX ADP 6.47059
170 2PL3 ADP 6.47059
171 1IWE IMP 6.47059
172 3DKP ADP 6.47059
173 1G6O ADP 6.47059
174 2GDJ ANP 6.47059
175 1R6B ADP 6.47059
176 5LB3 ADP 6.47059
177 2QEN ADP 6.47059
178 5AK0 8V1 6.47059
179 2JLR ANP 6.47059
180 4A4Z ANP 6.47059
181 2WZF BGC 6.47059
182 5VHC BEF ADP 6.47059
183 1P72 ADP 6.47059
184 3BFV ADP 6.47059
185 3ITJ CIT 6.47059
186 2IXE ATP 6.47059
187 6H5E ANP 6.47059
188 1SVM ATP 6.47059
189 3P4X ADP 6.47059
190 2ORV 4TA 6.47059
191 1W4R TTP 6.47059
192 5MVR ADP 6.79012
193 3AB3 GDP 7.05882
194 2KIN ADP 7.05882
195 2VVG ADP 7.05882
196 4H1V GNP 7.05882
197 1ZCB GDP 7.05882
198 1D2E GDP 7.05882
199 3KJI ADP 7.05882
200 3ZFD ANP 7.05882
201 3T34 GDP 7.05882
202 3TBK ANP 7.05882
203 5L3V GDP 7.05882
204 4ZG4 VO4 ADP 7.05882
205 5MZN ADP 7.05882
206 2XAU ADP 7.05882
207 1B7T ADP 7.05882
208 1KK8 BEF ADP 7.05882
209 5LTJ BEF 7.05882
210 2D7D ADP 7.05882
211 2VB6 ADP BEF 7.05882
212 1OYY AGS 7.05882
213 3BFX A3P 7.05882
214 4HSE ADP 7.05882
215 4PFO ADP 7.05882
216 3QKT ANP 7.05882
217 5LTJ ADP 7.05882
218 1CS4 GSP 7.64706
219 6AU6 GDP 7.64706
220 1BH2 GSP 7.64706
221 3VMF GTP 7.64706
222 1H65 GDP 7.64706
223 5ZXD ATP 7.64706
224 4LYA ATP 7.64706
225 2FAH GDP 7.64706
226 3DZD ADP 7.64706
227 4IEE AGS 7.64706
228 4ZDJ UTP 7.64706
229 4BQS K2Q 7.64706
230 4BQS ADP 7.64706
231 5H4S RAM 7.64706
232 1CR1 TTP 7.64706
233 5ZB0 ADP 7.64706
234 5ZB0 TYD 7.64706
235 4O48 ASP 7.64706
236 1MJT ITU 7.64706
237 1W7J ADP BEF 7.94702
238 1F2U ATP 8.10811
239 5H7J GCP 8.23529
240 2ODE ALF GDP 8.23529
241 2W58 ADP 8.23529
242 6CRK GDP 8.23529
243 1SVK ALF GDP 8.23529
244 1GP2 GDP 8.23529
245 2OM2 GDP 8.23529
246 3MD0 GDP 8.23529
247 3TK1 GDP 8.23529
248 3DEF GDP 8.23529
249 5TSH ANP 8.23529
250 5UIV ADP 8.23529
251 5L3S GNP 8.23529
252 5TSH ADP 8.23529
253 4PX9 ADP 8.23529
254 4R43 GDP 8.23529
255 5L3W GDP 8.23529
256 3VX3 ADP 8.23529
257 2BIF ANP 8.23529
258 2BIF SIN 8.23529
259 3QF7 ANP 8.23529
260 4IOK ADP 8.23529
261 4IOK XPO 8.23529
262 4TTQ ATP 8.23529
263 1I0B PEL 8.23529
264 1RGE 2GP 8.33333
265 1TAD ALF 8.82353
266 1TAD GDP 8.82353
267 2XTZ GSP 8.82353
268 1FQK GDP 8.82353
269 2ZR9 DTP 8.82353
270 4XTR ATP 8.82353
271 4XVU ATP 8.82353
272 1FQK ALF 8.82353
273 2WOJ ADP ALF 8.82353
274 3ZS9 ADP ALF 8.82353
275 4XTR ADP 8.82353
276 1IN4 ADP 8.82353
277 6CS8 F9Y 8.82353
278 1P9B GDP 8.82353
279 4OI4 ATP 8.82353
280 2X7I CIT 8.82353
281 1F9V ADP 8.82353
282 2GWH A3P 8.82353
283 1XP8 AGS 9.01639
284 1SKQ GDP 9.41177
285 4PPF FLC 9.41177
286 1V8K ANP 9.41177
287 5XKT GNP 9.41177
288 1W0J ADP 9.41177
289 2CK3 ANP 9.41177
290 5XDR ADP 9.41177
291 4QOS ADP 9.41177
292 4D81 ADP 9.41177
293 1W0J ADP BEF 9.41177
294 4OHY ANP 9.41177
295 3IIJ ADP 9.41177
296 1LVK MNT BEF 9.41177
297 1UJ2 ADP 9.41177
298 5G41 AP5 9.41177
299 2CK3 ADP 9.41177
300 1UJ2 C5P 9.41177
301 4MKF AP5 9.41177
302 1S3G AP5 9.41177
303 3FB4 AP5 9.41177
304 4MKG AP5 9.41177
305 4X8O AP5 9.41177
306 5G3Y ADP 9.41177
307 1K6M AGS 9.41177
308 2JCB ADP 9.41177
309 1T8U UAP SGN IDS SGN 9.41177
310 2NCD ADP 9.41177
311 1NST A3P 9.41177
312 1FQJ GDP 9.52381
313 1FQJ ALF 9.52381
314 4LPS GDP 10
315 2CBZ ATP 10
316 1DAR GDP 10
317 4HI0 GDP 10
318 4XGU ADP 10
319 2CDN ADP 10
320 5L3R GCP 10
321 3KTA AP5 10
322 2ZTS ADP 10
323 1AKY AP5 10
324 1KO8 6PG 10
325 6FHQ DE5 10.3448
326 1XX6 ADP 10.5882
327 1F5N GNP 10.5882
328 5XLS URA 10.5882
329 4YS0 ADP 10.5882
330 3H4S ADP 10.5882
331 4FRZ ADP 10.5882
332 4KVA GTP 11.1765
333 2C9O ADP 11.1765
334 5M7P ADP 11.1765
335 5CK5 GDP 11.7647
336 5KSP GDP 11.7647
337 3WXM GTP 11.7647
338 5N69 ADP 11.7647
339 4NE2 SH2 11.7647
340 4NE2 ADP 11.7647
341 2QZ4 ADP 11.7647
342 4J0Q GDP 12.3529
343 2AWN ADP 12.3529
344 3A4M ADP 12.3529
345 2GK6 ADP 12.3529
346 6B4K ANP 12.3529
347 5IRN ADP 12.3529
348 2RGX AP5 12.3529
349 3RLF ANP 12.3529
350 5W76 GDP 12.9412
351 5W75 GDP 12.9412
352 2C78 GNP 12.9412
353 2C77 GNP 12.9412
354 5ZBR ANP 12.9412
355 3ZIA ADP 12.9412
356 3ZIA ATP 12.9412
357 4FCW ADP 12.9412
358 6FAA ADP 12.9412
359 1X6V ADP 12.9412
360 1QHH ATP 13.0435
361 2XTN GTP 13.5294
362 1VHT BA3 13.5294
363 2IS6 ADP 13.5294
364 1DAK ADP 13.5294
365 1DAK DPU 13.5294
366 5Y6N ADP 13.5294
367 2Y65 ADP 14.1176
368 1TQ4 GDP 14.1176
369 2BEK ATP 14.1176
370 2J5V PCA 14.1176
371 3CX8 GSP 14.7059
372 4CVN ADP 14.7059
373 3FKQ ATP 14.7059
374 3VM7 GLC 14.7059
375 2ZJ5 ADP 14.7059
376 4AG5 ADP 15.2941
377 5KSZ GCP 15.2941
378 1QF5 RPL 15.2941
379 1QF5 GDP 15.2941
380 2QN6 GDP 15.8824
381 1KK1 GNP 15.8824
382 4RD0 GDP 15.8824
383 2XT3 ADP 15.8824
384 5IRR GSP 15.8824
385 2CE7 ADP 15.8824
386 4RZ3 ADP 15.8824
387 4P4T GDP 16.4706
388 1IHU AF3 16.4706
389 1IHU ADP 16.4706
390 5NM7 GLY 16.4706
391 4QM7 GTP 16.9591
392 3CNL GNP 17.0588
393 4NCN GTP 17.6471
394 4TMZ GSP 17.6471
395 6A20 ADP 17.6471
396 5M04 GDP 17.6471
397 1G7C 5GP 18.0851
398 5HR5 ADP 18.2353
399 5I0H ADP BEF 18.8235
400 5H7K GDP 20
401 4JLV ADP 20
402 3PQC GDP 21.1765
403 5KDO GDP 21.6216
404 1Y4Z PCI 22.3529
405 1NN5 2DT 22.3529
406 1NN5 ANP 22.3529
407 1YRB GDP 22.9412
408 1PUJ GNP 22.9412
409 1GOT GDP 23.2877
410 1G7S GDP 25.8824
411 3EC1 GDP 26.4706
412 1RJ9 GCP 27.0588
413 2V7Q ATP 28.7879
414 2V7Q ADP 28.7879
415 4ZI2 GNP 28.9474
416 4GOJ GNP 29.1005
417 5YT0 GDP 29.4118
418 4M9Q GNP 29.4118
419 3EWA ANP 30
420 1FZQ GDP 30.3867
421 5FG3 GDP 30.5882
422 2GJ8 ALF GDP 31.1765
423 3WY9 GDP 31.25
424 1Y3A GDP 31.25
425 3IO3 ADP 31.7647
426 2QTV GNP 32.9341
427 2GKS ADP 32.9412
428 2A5F GTP 33.5294
429 4KAX GTP 33.7278
430 2W83 GTP 34.5455
431 3PCR GTP 34.5679
432 1MR3 G3D 34.7059
433 2ZEJ GDP 34.7059
434 2J59 GTP 34.9398
435 3N5C GDP 35.1852
436 4YLG GDP 35.2941
437 4BAS GNP 35.2941
438 3DOE GTP 35.8824
439 4ZKD GDP 36.4706
440 3T12 GDP ALF 38.2353
441 4B47 GDP 38.2353
442 3T1O GDP 38.2353
443 5EE5 GTP 38.8235
444 1UPT GTP 39.1813
445 5DI3 GNP 42.3529
446 3AQ4 GDP 42.9412
447 2X77 GDP 43.5294
448 2FH5 GTP 44.7059
449 1WF3 GNP 44.7059
450 1KSH GDP 47.6471
451 2CJW GDP 47.6471
452 3REF GDP 49.4118
Pocket No.: 2; Query (leader) PDB : 1Z08; Ligand: GNP; Similar sites found with APoc: 51
This union binding pocket(no: 2) in the query (biounit: 1z08.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 1DCP HBI None
2 1UO5 PIH None
3 2RI1 GLP None
4 5TWJ SAM None
5 3BIB PSF None
6 2ATJ BHO 1.17647
7 1F76 ORO 1.76471
8 3BP1 GUN 1.76471
9 5NGZ 2BG 1.76471
10 2UVO NAG 2.94118
11 1PZM 5GP 2.94118
12 3TY3 GGG 2.94118
13 3AIA SAM 2.94118
14 4JLS 3ZE 3.28947
15 4G5H UD7 4.11765
16 3GD8 GOL 4.70588
17 4UP4 GAL NAG 4.70588
18 4PVR ASP 4.70588
19 3KIF GDL 4.71698
20 3NIM ARG ARG ALA ALA 4.87805
21 2VOH CIT 5.09554
22 3R7F CP 5.29412
23 2F2H XTG 5.88235
24 1ZX5 LFR 5.88235
25 4DYG MES 5.88235
26 3ZVS MLI 6.25
27 1DL7 NCH 6.42202
28 1V2X SAM 6.47059
29 1O5Q PYR 6.47059
30 2HXW FLC 6.47059
31 3FJG 3PG 6.47059
32 5CIC 51R 6.48148
33 4B2D FBP 7.05882
34 5LV1 78T 7.14286
35 5MEX PAP 7.14286
36 3L6C MLI 7.64706
37 1G8S MET 8.23529
38 1DNP MHF 8.82353
39 1P4V GLY 9.41177
40 4DD8 BAT 9.41177
41 6H45 QEI 10
42 1GPJ CIT 10
43 5D9G GLU ASN LEU TYR PHE GLN 10
44 3RC3 ANP 11.7647
45 1H5S TMP 12.9412
46 5O96 SAM 16.4706
47 3N7S 3N7 16.5217
48 5HJQ I3P 17.0588
49 1APZ ASP 18.5185
50 6HL7 CP 19.4118
51 4U60 SIA GAL NGA 25.8824
Pocket No.: 3; Query (leader) PDB : 1Z08; Ligand: GNP; Similar sites found with APoc: 13
This union binding pocket(no: 3) in the query (biounit: 1z08.bio3) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 3P13 RIP None
2 1ZEI CRS None
3 4M6T SAM 2.18579
4 2QG6 NMN 2.35294
5 1VKJ A3P 2.94118
6 2Z5F A3P 3.52941
7 4UTG ANP 3.52941
8 2PKA BEN 5.92105
9 4UXH T5A 6.47059
10 3VPD CIT 8.82353
11 1BO4 COA 8.92857
12 1T8U A3P 9.41177
13 4G86 BNT 12.3529
Pocket No.: 4; Query (leader) PDB : 1Z08; Ligand: GNP; Similar sites found with APoc: 14
This union binding pocket(no: 4) in the query (biounit: 1z08.bio2) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 4CNE SAH 2.35294
2 6G47 SIA 3.34928
3 5YW5 ADE 3.52941
4 5MB4 NAG 4.11765
5 5MUL BDP 5.29412
6 2Z48 NGA 5.88235
7 1AQU A3P 6.47059
8 5XJ7 87O 7.64706
9 1CT9 GLN 8.23529
10 2I4I AMP 8.23529
11 4PU6 ASP 12.3529
12 3H0L ADP 12.766
13 4U60 SIA 25.8824
14 2J73 GLC GLC GLC 35.9223
Pocket No.: 5; Query (leader) PDB : 1Z08; Ligand: GNP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 1z08.bio5) has 24 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 1Z08; Ligand: GNP; Similar sites found with APoc: 2
This union binding pocket(no: 6) in the query (biounit: 1z08.bio5) has 24 residues
No: Leader PDB Ligand Sequence Similarity
1 4USI AKG None
2 3A9Y CYS 8.82353
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