Receptor
PDB id Resolution Class Description Source Keywords
1Z0A 2.12 Å NON-ENZYME: TRANSPORT GDP-BOUND RAB2A GTPASE HOMO SAPIENS RAB GTPASE RAB2 VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GDP A:1200;
B:2200;
C:3200;
D:4200;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
MG A:1201;
B:2201;
C:3201;
D:4201;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1Z0A 2.12 Å NON-ENZYME: TRANSPORT GDP-BOUND RAB2A GTPASE HOMO SAPIENS RAB GTPASE RAB2 VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 199 families.
1 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (12)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 14 families.
1 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
3 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
9 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (246)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z2A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1Z22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
3 1YZT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
4 1YZU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
5 1Z08 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 1Z0I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
7 4DKX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 2Y8E - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 2A5J - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 4LHW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
11 4LHV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 2P2L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 2W2V - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
14 1MH1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
15 2WKP - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
16 2WKQ - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
17 3RS3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 2CL6 - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
19 5WDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 3TGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 1P2T - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 4Q01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
23 4M21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
24 821P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 1Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
26 6Q21 - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
27 4L9W - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 4WA7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 3V4F - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 3K9N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
31 4M1T - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
32 4XVQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 5V71 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 2QUZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 1CLU Kd = 5.4 nM DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
36 4L8G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
37 2RGD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 4PZY - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
39 4LPK - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
40 4DLV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
41 4LRW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
42 2CLD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 4M1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
44 3L8Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
45 3LBH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
46 721P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 1LF5 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
48 1GNR - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
49 4LUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50 2RGE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
51 4DLS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
52 4M22 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
53 4DLY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 1ZW6 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
55 2RGC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
56 5V9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
57 2CL0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
58 4TQA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 3RRZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
60 2EVW - XY2 C12 H15 N5 O4 CC(=O)N(C)....
61 2RGB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
62 4LDJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
63 1XJ0 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
64 1ZVQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
65 1P2S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
66 5V6V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 621P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
68 1P2V - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 2CL7 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70 3OIW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 4LV6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
72 4DLT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1P2U - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 5V6S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
75 3RS0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5B30 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
77 5B2Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
78 3KKN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
79 4M1O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
80 4M1Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
81 3I3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
82 4OBE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
83 3RRY - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
84 1QRA - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
85 4LYJ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
86 121P - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
87 1RVD - DBG C23 H27 N8 O13 P3 c1ccc(cc1)....
88 2RGA - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
89 3RS7 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
90 5UHV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
91 2CLC - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
92 4EPT - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
93 4EPY Kd = 340 uM 0QY C21 H21 N5 O c1ccc2c(c1....
94 4DLZ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
95 1AGP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
96 1GNQ - CAG C18 H23 N6 O16 P3 C[C@H](c1c....
97 2Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
98 3RS2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
99 4L9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
100 4M1S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
101 4EPV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
102 5WDP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
103 4TQ9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
104 3K8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
105 3OIV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
106 4Q02 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
107 3LBI - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
108 3RSL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
109 1LF0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
110 1XCM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
111 421P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
112 4DLR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
113 2CE2 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
114 4QL3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
115 4Q21 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
116 4DLU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
117 1CTQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
118 3OIU - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
119 3RS5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
120 4EPW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
121 5WDQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
122 1IOZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
123 221P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
124 4LYH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
125 4DLX - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
126 4Q03 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
127 4PZZ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
128 3KKM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
129 1JAI - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
130 3L8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
131 3RS4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
132 3LBN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
133 4NMM - Y9Z C14 H22 N6 O12 P2 CC(=O)NCCO....
134 3RSO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
135 4XVR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
136 5P21 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
137 5F2E - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
138 4EPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
139 4EPR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
140 4DLW - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
141 5V9O - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
142 2RGG - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
143 4LYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
144 1JAH - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
145 1YU9 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
146 2BME - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
147 2BMD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
148 1YZN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
149 3RWM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
150 3RWO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
151 3REG - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
152 2F9L - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
153 2F9M - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
154 1YZK - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
155 1OIV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
156 2FE4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
157 2FFQ - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
158 2E9S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
159 5US4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
160 5UQW - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
161 5USJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
162 3NKV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
163 1HUQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
164 1Z07 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
165 1N6R - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
166 1Z0D - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
167 1N6H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
168 1N6P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
169 1N6K - GDP AF3 n/a n/a
170 1N6N - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
171 1N6I - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
172 1R2Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
173 1N6L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
174 1N6O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
175 1TU4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
176 1EK0 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
177 1S8F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
178 1YZL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
179 1WMS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
180 1D5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
181 1Z0F - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
182 3E5H - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
183 4DSU - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
184 4DST - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
185 4DSO - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
186 4DSN - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
187 1KAO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
188 3RAP - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
189 1YZQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
190 2GIL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
191 1Z0A - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
192 1KY2 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
193 1KY3 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
194 2HT6 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
195 3KKO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
196 3KKQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
197 3KKP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
198 1X1R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
199 1X1S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
200 1T91 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
201 1VG8 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
202 2GCP - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
203 2GCN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
204 2J0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
205 3X1Z - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
206 3X1Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
207 3X1W - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
208 3X1X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
209 4Z8Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
210 1G17 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
211 1G16 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
212 1M7B - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
213 2DPX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
214 3Q7Q - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
215 3Q7P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
216 3Q72 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
217 1U8Z - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
218 1U90 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
219 1U8Y - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
220 1YVD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
221 5WDR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
222 5WDS - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
223 1Z06 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
224 3TH5 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
225 3SBD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
226 1OIX - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
227 1OIW - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
228 2QRZ - GCP C11 H18 N5 O13 P3 c1nc2c(n1[....
229 1A4R Kd = 9.4 pM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
230 1KMQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
231 1DPF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
232 1FTN - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
233 1A2B - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
234 4U5X - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
235 3Q85 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
236 1RYH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
237 1RYF - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
238 1VG1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
239 3RAB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
240 1GWN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
241 2EW1 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
242 4O25 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
243 4O2R - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
244 4O2L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
245 1XTQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
246 3SEA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 153
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 GNP 0.839506 0.973684
6 G 0.828947 0.986486
7 5GP 0.828947 0.986486
8 G1R 0.82716 0.986667
9 GCP 0.82716 0.973684
10 GSP 0.817073 0.948718
11 GAV 0.797619 0.961039
12 GMV 0.792683 0.973684
13 G2P 0.77381 0.961039
14 G2R 0.770115 0.961039
15 GDP MG 0.759036 0.923077
16 GP2 0.756098 0.961039
17 GDP BEF 0.75 0.9
18 GDD 0.747253 0.961039
19 GKE 0.747253 0.961039
20 GDC 0.747253 0.961039
21 GPG 0.741573 0.961039
22 G3D 0.732558 0.986486
23 ALF 5GP 0.729412 0.888889
24 Y9Z 0.728261 0.902439
25 GTP MG 0.724138 0.923077
26 BEF GDP 0.724138 0.888889
27 G5P 0.723404 0.973684
28 GFB 0.72043 0.961039
29 GTG 0.72043 0.936709
30 GDR 0.72043 0.961039
31 G4P 0.715909 0.986486
32 GCP G 0.715909 0.935065
33 6CK 0.712766 0.936709
34 G3A 0.712766 0.973684
35 GDP ALF 0.7 0.888889
36 GDP AF3 0.7 0.888889
37 YGP 0.698925 0.901235
38 JB2 0.697917 0.961039
39 GKD 0.697917 0.961039
40 GDX 0.690722 0.973684
41 GPD 0.690722 0.925
42 GMP 0.684211 0.88
43 0O2 0.666667 0.986486
44 G G 0.659574 0.935065
45 JB3 0.656863 0.948718
46 NGD 0.650485 0.961039
47 GDP 7MG 0.636364 0.911392
48 DGI 0.636364 0.923077
49 U2G 0.634615 0.936709
50 GPX 0.634409 0.946667
51 IDP 0.632184 0.972973
52 2MD 0.632075 0.891566
53 CAG 0.62963 0.880952
54 CG2 0.622642 0.936709
55 FEG 0.619048 0.879518
56 MGD 0.614679 0.891566
57 ZGP 0.613208 0.869048
58 GH3 0.612903 0.973333
59 3GP 0.611765 0.946667
60 MD1 0.607143 0.891566
61 PGD 0.59292 0.925
62 DGT 0.591398 0.923077
63 BGO 0.588785 0.924051
64 TPG 0.582609 0.840909
65 DBG 0.582609 0.948718
66 2GP 0.574713 0.96
67 FE9 0.570175 0.776596
68 I2C FE2 CMO CMO 0.566372 0.808989
69 G A A A 0.553571 0.923077
70 MGP 0.553191 0.961039
71 U A G G 0.548673 0.935065
72 G4M 0.548387 0.880952
73 6G0 0.547368 0.961039
74 G1R G1R 0.542373 0.924051
75 P2G 0.527473 0.883117
76 PGD O 0.525 0.850575
77 ADP 0.522222 0.92
78 GGM 0.517544 0.901235
79 DG 0.516484 0.910256
80 DGP 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G G U 0.509259 0.935065
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 G C 0.504348 0.9
86 GPC 0.491525 0.879518
87 G7M 0.483871 0.948052
88 6AD 0.479592 0.841463
89 ATP 0.473684 0.92
90 G2Q 0.471154 0.961039
91 U G A 0.469697 0.888889
92 5FA 0.46875 0.92
93 AQP 0.46875 0.92
94 GTA 0.468468 0.936709
95 7DD 0.468085 0.906667
96 G G G RPC 0.466102 0.875
97 SGP 0.463158 0.82716
98 01G 0.462963 0.902439
99 B4P 0.457447 0.894737
100 AP5 0.457447 0.894737
101 A2D 0.456522 0.894737
102 G G G C 0.455285 0.9125
103 ACQ 0.454545 0.896104
104 5GP 5GP 0.454545 0.883117
105 ANP 0.454545 0.896104
106 A G C C 0.451613 0.911392
107 APC G U 0.45082 0.886076
108 G U34 0.449153 0.888889
109 DG DG 0.448598 0.865854
110 ITT 0.447917 0.868421
111 BA3 0.446809 0.894737
112 35G 0.444444 0.933333
113 C2E 0.444444 0.921053
114 PCG 0.444444 0.933333
115 MGO 0.441176 0.864198
116 AN2 0.4375 0.907895
117 G C C C 0.4375 0.924051
118 M33 0.43299 0.883117
119 UCG 0.429688 0.911392
120 A G U 0.42963 0.888889
121 ACP 0.428571 0.896104
122 MGQ 0.424528 0.935897
123 7DT 0.424242 0.906667
124 APR 0.424242 0.894737
125 AR6 0.424242 0.894737
126 93A 0.42268 0.833333
127 A4P 0.420168 0.869048
128 SAP 0.42 0.873418
129 AD9 0.42 0.896104
130 AGS 0.42 0.873418
131 G8D 0.42 0.875
132 CA0 0.418367 0.896104
133 ATF 0.417476 0.884615
134 AGO 0.414634 0.888889
135 NIA 0.413043 0.82716
136 MGV 0.412844 0.890244
137 TAT 0.411765 0.884615
138 A1R 0.411215 0.839506
139 ADQ 0.411215 0.871795
140 RGT 0.410714 0.909091
141 CGP 0.409836 0.86747
142 AMP 0.408602 0.893333
143 A 0.408602 0.893333
144 UP5 0.40678 0.873418
145 C2R 0.406593 0.906667
146 AMZ 0.406593 0.918919
147 JBT 0.405882 0.778947
148 A22 0.40566 0.907895
149 25L 0.405405 0.907895
150 ADX 0.40404 0.809524
151 8OD 0.401961 0.946667
152 4TC 0.4 0.851852
153 50T 0.4 0.883117
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: 399
This union binding pocket(no: 1) in the query (biounit: 1z0a.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3WY9 GDP 0.000000000007432 0.85336 None
2 3TK1 GDP 0.00000000003549 0.83636 None
3 3WYA GDP 0.00000000003023 0.80879 None
4 1SVI GDP 0.0000000002347 0.78059 None
5 2GJ8 ALF GDP 0.000000002117 0.55782 None
6 2PEZ DAT 0.00001587 0.55579 None
7 2PEZ GGZ 0.00001587 0.55579 None
8 4E03 ADP 0.00001524 0.53173 None
9 3DZD ADP 0.00003956 0.49462 None
10 4MKG AP5 0.0004854 0.49326 None
11 4MKF AP5 0.0006088 0.48956 None
12 2CHG ANP 0.0000769 0.47086 None
13 1W5T ANP 0.0002726 0.43176 None
14 1W5T ADP 0.0007278 0.43092 None
15 4QAG F95 0.02295 0.40271 None
16 3T1O GDP 0.00000002108 0.65343 1.14943
17 1Y63 ADP 0.000003538 0.56913 1.14943
18 4AG5 ADP 0.000004882 0.5877 1.72414
19 4Q1A 2XZ 0.0001961 0.57024 1.72414
20 4Q1A UDP 0.0001961 0.57024 1.72414
21 1FP6 ADP 0.00001257 0.51508 1.72414
22 1G6O ADP 0.00005727 0.49887 1.72414
23 1IN4 ADP 0.00005327 0.46654 1.72414
24 4GOX A3P 0.0001295 0.43135 1.72414
25 2XTZ GSP 0.000000005197 0.55956 2.29885
26 5H56 ADP 0.00002176 0.54565 2.29885
27 5H56 TYD 0.00002176 0.54565 2.29885
28 5BQ5 ADP BEF 0.00002398 0.51589 2.29885
29 3BOS CDP 0.00006083 0.51071 2.29885
30 1H65 GDP 0.000003215 0.49757 2.29885
31 4LC1 GDP 0.0000000005602 0.74883 2.87356
32 5GOE GDP 0.000000001306 0.70779 2.87356
33 3PQC GDP 0.00000001523 0.65979 2.87356
34 2HF9 GSP 0.00000001604 0.62508 2.87356
35 3ZFD ANP 0.00001321 0.52755 2.87356
36 5I34 GDP 0.00001869 0.51164 2.87356
37 1ION ADP 0.00003608 0.5079 2.87356
38 3FKQ ATP 0.00001277 0.50362 2.87356
39 3VM7 GLC 0.01557 0.40745 2.87356
40 2C77 GNP 0.000000002166 0.71348 3.44828
41 2C78 GNP 0.0000000007901 0.62261 3.44828
42 1V8K ANP 0.000004499 0.56419 3.44828
43 2OG2 MLI 0.00004403 0.54325 3.44828
44 3B9Q MLI 0.00005243 0.53104 3.44828
45 2GDJ ANP 0.00005396 0.51317 3.44828
46 4IOK ADP 0.00024 0.49231 3.44828
47 4IOK XPO 0.0001892 0.49165 3.44828
48 3EWA ANP 0.00002875 0.49087 3.44828
49 2VF7 ADP 0.0001385 0.48754 3.44828
50 5GJC ATP 0.00003578 0.48695 3.44828
51 2BIF ANP 0.0006276 0.48003 3.44828
52 2BIF SIN 0.001049 0.48003 3.44828
53 3VX3 ADP 0.00003208 0.47811 3.44828
54 1YTM ATP 0.00004542 0.46253 3.44828
55 2ZE7 DST 0.001448 0.45358 3.44828
56 2ZE7 AMP 0.004148 0.43035 3.44828
57 2D24 XYS XYS 0.01524 0.41421 3.44828
58 3FYH ADP 0.0001739 0.41313 3.44828
59 5E5U MLI 0.01038 0.41277 3.44828
60 2AWN ADP 0.0000001028 0.6982 4.02299
61 1G7C 5GP 0.0000001096 0.64048 4.02299
62 2IYL GDP 0.000001991 0.58094 4.02299
63 1G3Q ADP 0.000002977 0.56443 4.02299
64 1SQ5 ADP 0.00000309 0.56369 4.02299
65 3BFV ADP 0.000007429 0.55389 4.02299
66 2OFW ADX 0.00003222 0.55013 4.02299
67 3FWY ADP 0.000002893 0.52922 4.02299
68 5I0H ADP BEF 0.0000391 0.51698 4.02299
69 5K5Z ANP 0.00005884 0.51544 4.02299
70 1CR1 TTP 0.0000441 0.51457 4.02299
71 1RRC ADP 0.000001551 0.4891 4.02299
72 4ZNL BEF ADP 0.00008685 0.48125 4.02299
73 2OZE AGS 0.00009197 0.45831 4.02299
74 5WRI A3P 0.001045 0.4531 4.02299
75 4YS0 ADP 0.0005091 0.43879 4.02299
76 3QXC ATP 0.00002387 0.43768 4.02299
77 3BER AMP 0.005535 0.41802 4.02299
78 1X6V ADP 0.00006255 0.40723 4.02299
79 3NDJ JHZ 0.03743 0.40621 4.02299
80 2JAQ DCP 0.0005398 0.40471 4.02299
81 2ZTS ADP 0.00008899 0.4564 4.38247
82 1HTW ADP 0.00000923 0.5244 4.43038
83 2FH5 GTP 0.00000000003695 0.68912 4.5977
84 1D2E GDP 0.000000001135 0.68844 4.5977
85 5L3W GDP 0.000006617 0.54106 4.5977
86 2DPY ADP 0.00002967 0.54102 4.5977
87 5TSH ANP 0.000004454 0.5256 4.5977
88 2PL3 ADP 0.00007824 0.51254 4.5977
89 3H86 AP5 0.0004257 0.48961 4.5977
90 2GK6 ADP 0.0005025 0.47974 4.5977
91 5TSH ADP 0.00001058 0.47905 4.5977
92 3KTA AP5 0.0001433 0.46927 4.5977
93 2D7D ADP 0.0004893 0.44305 4.5977
94 5MEX SZZ 0.006134 0.43658 4.5977
95 5MEX PAP 0.003062 0.42756 4.5977
96 5EP2 AZU 0.004146 0.42344 4.5977
97 3RC3 ANP 0.006324 0.41989 4.5977
98 5H67 ATP 0.002716 0.41585 4.5977
99 2QG6 NMN 0.00008903 0.40907 4.5977
100 1XEX ATP 0.0001877 0.40591 4.5977
101 4WOP CTP 0.00001847 0.53201 4.88889
102 5MVR ADP 0.000007703 0.51683 4.93827
103 1SKQ GDP 0.00000000048 0.76551 5.17241
104 3VMF GTP 0.000000002484 0.72364 5.17241
105 2NCD ADP 0.00000004002 0.69395 5.17241
106 2CBZ ATP 0.0000001594 0.6856 5.17241
107 1TQ4 GDP 0.0000000002391 0.66096 5.17241
108 4CVN ADP 0.000003579 0.58683 5.17241
109 1YQT ADP 0.00001381 0.56509 5.17241
110 4P4T GDP 0.0000002513 0.56127 5.17241
111 3DEF GDP 0.000001459 0.55591 5.17241
112 5LB3 ADP 0.00004666 0.52344 5.17241
113 2Q2Y MKR 0.000115 0.52289 5.17241
114 2Q2Y ADP 0.0001222 0.52289 5.17241
115 1CS4 GSP 0.00000002573 0.5214 5.17241
116 2D2F ADP 0.0001127 0.51979 5.17241
117 1F9V ADP 0.0000008675 0.517 5.17241
118 2CE7 ADP 0.00002362 0.51618 5.17241
119 1AZT GSP 0.00000001865 0.51464 5.17241
120 2OBM ADP 0.0002176 0.50634 5.17241
121 2KIN ADP 0.0000001349 0.50593 5.17241
122 5G41 AP5 0.0004041 0.50289 5.17241
123 4RZ3 ADP 0.00006749 0.50111 5.17241
124 3P4X ADP 0.00001458 0.49595 5.17241
125 1Z6T ADP 0.0000303 0.4861 5.17241
126 4QRH 0O2 0.0002529 0.47955 5.17241
127 4IHQ ADP 0.0001605 0.45165 5.17241
128 4KBF AMP 0.0004521 0.43746 5.17241
129 1J99 AND 0.01002 0.42159 5.17241
130 1UJ2 ADP 0.00004848 0.41993 5.17241
131 1UJ2 C5P 0.00005701 0.41903 5.17241
132 5J1J ANP 0.000007289 0.55564 5.26316
133 2RCN GDP 0.000000000003155 0.8552 5.74713
134 5HCN GCP 0.0000000003753 0.74425 5.74713
135 4ZKD GDP 0.000000003058 0.72227 5.74713
136 3WXM GTP 0.00000000375 0.7152 5.74713
137 2XT3 ADP 0.0000001819 0.66692 5.74713
138 4WZ6 ATP 0.000003422 0.59648 5.74713
139 5N69 ADP 0.000001711 0.55151 5.74713
140 1G41 ADP 0.00002216 0.51743 5.74713
141 2XTN GTP 0.0000005757 0.51644 5.74713
142 1OFH ADP 0.00002472 0.51529 5.74713
143 1BG2 ADP 0.00000006962 0.51374 5.74713
144 2PZE ATP 0.0000009321 0.49184 5.74713
145 3FB4 AP5 0.0005868 0.48918 5.74713
146 1R0X ATP 0.00005138 0.47208 5.74713
147 3FVQ ATP 0.00009327 0.44627 5.74713
148 2FNA ADP 0.00005659 0.44624 5.74713
149 4TMK T5A 0.005094 0.43588 5.74713
150 2ZPT A3P 0.01525 0.43002 5.74713
151 4IDN GNP 0.0002818 0.42186 5.74713
152 4WEI GLC GAL 0.01193 0.41304 5.74713
153 4GBM A3P 0.0005662 0.40793 5.74713
154 3QKT ANP 0.0003231 0.40586 5.74713
155 4OHY ANP 0.000328 0.40575 5.74713
156 3MD0 GDP 0.00000000005263 0.81211 6.32184
157 4PPF FLC 0.000003816 0.60283 6.32184
158 3ZQ6 ADP ALF 0.000008804 0.5585 6.32184
159 4WZA ADP 0.0001206 0.54225 6.32184
160 4WZA ACP 0.0001206 0.54225 6.32184
161 1W7J ADP BEF 0.000004319 0.52135 6.32184
162 4V03 ADP 0.00002029 0.51915 6.32184
163 3KJI ADP 0.00004717 0.50551 6.32184
164 2ZR9 DTP 0.0001256 0.49583 6.32184
165 5L3R GCP 0.000001044 0.49471 6.32184
166 1KO8 6PG 0.0001163 0.49279 6.32184
167 1IHU AF3 0.000006724 0.48156 6.32184
168 1IHU ADP 0.000007586 0.4704 6.32184
169 1K6M AGS 0.00003701 0.44465 6.32184
170 4PJ3 ANP 0.00107 0.43319 6.32184
171 3RLF ANP 0.00008183 0.43234 6.32184
172 4P32 ADP 0.0002703 0.42145 6.82731
173 3LRE ADP 0.0000001343 0.67974 6.89655
174 4M9Q GNP 0.0000000007481 0.62472 6.89655
175 4HI0 GDP 0.00000001679 0.59367 6.89655
176 4YDS ATP 0.000003037 0.59039 6.89655
177 1JJV ATP 0.00000749 0.57668 6.89655
178 4ZG4 VO4 ADP 0.000002646 0.57617 6.89655
179 4HSE ADP 0.00001261 0.53552 6.89655
180 5IRN ADP 0.000019 0.5234 6.89655
181 2Y65 ADP 0.0000003316 0.51177 6.89655
182 3DKP ADP 0.00007263 0.50707 6.89655
183 2ZPA ADP 0.00008583 0.49884 6.89655
184 5LTJ ADP 0.00005339 0.49057 6.89655
185 3B7G ANP 0.0001749 0.48285 6.89655
186 1P9B GDP 0.00005866 0.47741 6.89655
187 2XAU ADP 0.0003006 0.46646 6.89655
188 1OYY AGS 0.00224 0.43663 6.89655
189 1GOJ ADP 0.00000002436 0.72228 7.47126
190 1T5C ADP 0.0000002916 0.66511 7.47126
191 4XVU ATP 0.000009814 0.54961 7.47126
192 3EZ2 ADP 0.00001977 0.54153 7.47126
193 4LYA ATP 0.0000209 0.52541 7.47126
194 4TTQ ATP 0.00003751 0.52064 7.47126
195 2QEN ADP 0.00003032 0.51696 7.47126
196 2FAH GDP 0.00004246 0.4938 7.47126
197 4KFU ACP 0.000005031 0.48896 7.47126
198 5FTB ANP 0.0001238 0.4838 7.47126
199 1UKZ ADP 0.000647 0.47939 7.47126
200 5MZN ADP 0.0006589 0.47387 7.47126
201 1FNN ADP 0.00005595 0.46654 7.47126
202 4R2I ANP 0.001499 0.45605 7.47126
203 5FHD ADP ALF 0.00008576 0.44765 7.47126
204 3ZS9 ADP ALF 0.00001146 0.44348 7.47126
205 2FSH ANP 0.0003472 0.44218 7.47126
206 2WOJ ADP ALF 0.00001356 0.44066 7.47126
207 3IO3 ADP 0.00000109 0.58586 7.75862
208 1YRB GDP 0.00000000001981 0.76286 8.01527
209 1WDT GTP 0.0000005457 0.54743 8.04598
210 2IS6 ADP 0.00004331 0.51769 8.04598
211 4QOS ADP 0.00006825 0.49544 8.04598
212 5XDR ADP 0.0001874 0.48147 8.04598
213 2X7I CIT 0.005787 0.41711 8.04598
214 1P7T PYR 0.04118 0.40235 8.04598
215 3IUY AMP 0.004837 0.40186 8.04598
216 5J1S ATP 0.0001623 0.42103 8.13008
217 4QM7 GTP 0.000005401 0.56044 8.18713
218 2VVG ADP 0.0000000256 0.52849 8.62069
219 3ZIA ATP 0.00002018 0.52611 8.62069
220 4D81 ADP 0.00001976 0.52263 8.62069
221 1W0J ADP 0.00002486 0.51812 8.62069
222 1W0J ADP BEF 0.00007875 0.50055 8.62069
223 3ZIA ADP 0.00003822 0.49435 8.62069
224 4FCW ADP 0.00006082 0.48982 8.62069
225 1U0J ADP 0.0007082 0.4661 8.62069
226 3T34 GDP 0.00001692 0.46566 8.62069
227 1NHX FTB 0.002539 0.46186 8.62069
228 1NHX PEP 0.002495 0.46124 8.62069
229 1XX6 ADP 0.0007719 0.4301 8.62069
230 1GXU 2HP 0.000177 0.47928 8.79121
231 4J0Q GDP 0.00000000005502 0.81117 9.1954
232 4DCT GDP 0.0000000000356 0.79142 9.1954
233 3CNL GNP 0.0000000003874 0.77003 9.1954
234 4PFO ADP 0.000008427 0.55726 9.1954
235 2VB6 ADP BEF 0.0000127 0.54438 9.1954
236 4H1V GNP 0.000001882 0.54047 9.1954
237 1NJF AGS 0.00002181 0.53111 9.1954
238 3H4S ADP 0.0000001334 0.52478 9.1954
239 4FRZ ADP 0.0000005874 0.52103 9.1954
240 1NJF ADP 0.00003803 0.51506 9.1954
241 3TBK ANP 0.0001618 0.50428 9.1954
242 1XP8 AGS 0.0002247 0.4903 9.1954
243 4A4Z ANP 0.001571 0.44393 9.1954
244 5M04 GDP 0.00000000005312 0.7149 9.77011
245 1JWY GDP 0.0000003724 0.58222 9.77011
246 1JWY ADP 0.00001721 0.5293 9.77011
247 1R6B ADP 0.000023 0.52349 9.77011
248 3UIE ANP 0.00002121 0.51829 9.77011
249 1XKV ATP 0.0000968 0.48861 9.77011
250 3BFX A3P 0.001168 0.41641 9.77011
251 5CK5 GDP 0.00000000008939 0.70721 10.3448
252 1M7G ADX 0.00001965 0.54957 10.3448
253 1M7G ADP 0.00003038 0.53688 10.3448
254 1M7G AV2 0.000001402 0.53416 10.3448
255 5IFS ADP 0.00003162 0.51048 10.3448
256 5VGR GDP 0.0001928 0.45457 10.3448
257 4XTR ATP 0.000009058 0.55124 10.8108
258 4XTR ADP 0.000008438 0.54508 10.8108
259 1LVG ADP 0.0000001809 0.55247 10.9195
260 1XMV ADP 0.0001224 0.49001 10.9195
261 1NY5 ADP 0.00003399 0.48567 10.9195
262 2BEK ATP 0.0001162 0.43927 10.9195
263 2F3R G5P 0.008459 0.42394 10.9195
264 2ODE ALF GDP 0.00000001467 0.69524 11.4943
265 3DC4 ADP 0.000002502 0.59458 11.4943
266 3Q9L ATP 0.0001441 0.46022 11.4943
267 1NST A3P 0.006143 0.41168 11.4943
268 3T12 GDP ALF 0.0000000288 0.57181 11.7647
269 1SVK ALF GDP 0.000000003445 0.72787 12.069
270 4LPS GDP 0.00000001853 0.66616 12.069
271 5KDO GDP 0.00000002232 0.59274 12.069
272 2OM2 GDP 0.00000002217 0.59101 12.069
273 1GP2 GDP 0.00000002226 0.56768 12.069
274 5IRR GSP 0.0000008138 0.51857 12.069
275 1BH2 GSP 0.00000005545 0.50352 12.069
276 4XGU ADP 0.0000436 0.48314 12.069
277 1QF5 RPL 0.008204 0.4682 12.069
278 2F5X ASP 0.0189 0.40225 12.069
279 2WHX ADP 0.00001107 0.57024 12.6437
280 1OE0 TTP 0.0003048 0.48563 12.6437
281 5HR5 ADP 0.0001785 0.48184 12.6437
282 5HR5 FLC 0.005116 0.43453 12.6437
283 1AQU A3P 0.003745 0.42151 12.6437
284 3U6B GDP 0.000000000012 0.84327 13.2184
285 4G5G GDP 0.00000000005572 0.79623 13.2184
286 3U6K GDP 0.000000000122 0.78013 13.2184
287 1D8T GDP 0.00000000003727 0.73783 13.2184
288 2HCJ GDP 0.00000000001373 0.73467 13.2184
289 4P3Y GDP 0.00000000001435 0.73376 13.2184
290 5JBQ GDP 0.00000000004739 0.73357 13.2184
291 2BVN GNP 0.0000000002873 0.71377 13.2184
292 4PC3 GDP 0.000000003324 0.66994 13.2184
293 1GOT GDP 0.00000002046 0.58042 13.7931
294 3NHB ADP 0.00000373 0.59389 14.3678
295 1FQJ GDP 0.00000001052 0.574 14.3678
296 3E70 GDP 0.000001902 0.5734 14.3678
297 1FQK GDP 0.00000003926 0.55727 14.3678
298 2QZ4 ADP 0.00001087 0.53136 14.3678
299 1VHT BA3 0.0002355 0.47123 14.3678
300 4PX9 ADP 0.0000325 0.48038 14.9425
301 1B7T ADP 0.00006924 0.49516 15.3846
302 3EC1 GDP 0.000000000857 0.70013 15.5172
303 3QF7 ANP 0.0002244 0.47968 15.5172
304 2ZJ5 ADP 0.01373 0.4114 15.5172
305 1KK8 BEF ADP 0.00004779 0.47841 15.5844
306 1PUJ GNP 0.000000001918 0.70449 16.092
307 3IIJ ADP 0.0000008341 0.5988 16.092
308 2JLR ANP 0.0001854 0.47856 16.092
309 2J5V PCA 0.03487 0.4078 16.092
310 3A4M ADP 0.000001134 0.61172 16.6667
311 2QN6 GDP 0.00000000002993 0.82401 17.2414
312 4RD0 GDP 0.0000000003715 0.75247 17.2414
313 4BQS ADP 0.00002344 0.53029 17.2414
314 4BQS K2Q 0.0002142 0.50554 17.2414
315 4B47 GDP 0.000000000003511 0.86917 17.8161
316 2C04 GCP 0.00003568 0.48891 17.8161
317 4JLV ADP 0.00006603 0.46855 17.8161
318 2QTV GNP 0.00000001594 0.68274 17.9641
319 1DAR GDP 0.000000001707 0.72596 18.3908
320 5KSP GDP 0.000000008699 0.6813 18.3908
321 5M7P ADP 0.00002671 0.52211 18.3908
322 4BAS GNP 0.00000004455 0.65597 18.9655
323 1G7S GDP 0.0000000002687 0.75095 19.5402
324 3AB3 GDP 0.000000007496 0.68859 19.5402
325 1ZCB GDP 0.0000000164 0.685 19.5402
326 3CX8 GSP 0.0000000165 0.5168 19.5402
327 4OI4 ATP 0.0003433 0.41254 20.1149
328 5FG3 GDP 0.000000000003473 0.7571 20.6897
329 4R43 GDP 0.00004573 0.51657 20.6897
330 4KVA GTP 0.000001521 0.4062 21.8391
331 2IXE ATP 0.0001772 0.42763 22.4138
332 2W58 ADP 0.0000001816 0.68347 22.9885
333 2C9O ADP 0.00004865 0.45888 22.9885
334 5KSZ GCP 0.00000003751 0.64217 23.5632
335 2V7Q ADP 0.00001855 0.5351 24
336 2V7Q ATP 0.0000262 0.51416 24
337 2CK3 ANP 0.00008428 0.4591 24
338 2CK3 ADP 0.00008456 0.43297 24
339 1Y3A GDP 0.00000001279 0.57623 25
340 1WF3 GNP 0.000000005002 0.71216 25.2874
341 1TAD ALF 0.00000001575 0.51717 25.8621
342 1TAD GDP 0.00000001575 0.51717 25.8621
343 4NCN GTP 0.0000000003817 0.61655 26.4368
344 4TMZ GSP 0.0000000004532 0.61439 26.4368
345 1KK1 GNP 0.0000000002068 0.78326 27.0115
346 5L3S GNP 0.000001069 0.59707 27.0115
347 5L3V GDP 0.0000009959 0.57807 27.0115
348 4IEE AGS 0.0002928 0.48472 27.0115
349 4YLG GDP 0.0000000002096 0.75235 28.3237
350 4LJ9 ACP 0.0001112 0.49832 28.7356
351 4GOJ GNP 0.0000000005755 0.74364 29.3103
352 4ZI2 GNP 0.0000000008596 0.73556 29.3103
353 5DI3 GNP 0.0000000007495 0.6256 29.3103
354 1FZQ GDP 0.00000000003866 0.80374 29.8343
355 4V0K GDP 0.000000005853 0.56779 30.1775
356 5KUT GDP 0.0000000004641 0.71098 30.4598
357 3AQ4 GDP 0.0000000002786 0.75022 31.0345
358 2J59 GTP 0.0000000002436 0.62822 31.3253
359 1KSH GDP 0.0000000001634 0.76529 31.6092
360 3PCR GTP 0.000000001859 0.60174 32.716
361 1MKY GDP 0.000000000006751 0.76753 33.3333
362 2X77 GDP 0.0000000001331 0.76501 33.8624
363 1MR3 G3D 0.0000000002236 0.72534 35.0575
364 2ZEJ GDP 0.000000009672 0.54013 36.7816
365 1UPT GTP 0.0000000002173 0.64302 38.5965
366 3DOE GTP 0.0000000001364 0.63615 39.0805
367 2A5F GTP 0.000000000827 0.743 39.6552
368 5EE5 GTP 0.0000000002044 0.76451 39.7661
369 4KAX GTP 0.000000001395 0.7258 40.2367
370 2W83 GTP 0.0000000003686 0.62325 41.2121
371 3N5C GDP 0.00000000008908 0.7866 42.5926
372 1NF3 GNP 0.000000001653 0.5751 43.1034
373 2NGR GDP 0.00000000004584 0.78636 43.6782
374 4DID GDP 0.000000000118 0.76742 43.6782
375 4YC7 GNP 0.0000000003039 0.75651 43.6782
376 4ITR GDP 0.000000001057 0.72418 43.6782
377 2WMO GTP 0.000000001652 0.7032 43.6782
378 1GRN GDP 0.0000000002113 0.69821 43.6782
379 2NGR AF3 0.01523 0.40569 43.6782
380 1GRN AF3 0.01649 0.40395 43.6782
381 1DS6 GDP 0.00000000001309 0.75812 45.977
382 3T5G GDP 0.000000000006998 0.81001 46.5517
383 1E96 GTP 0.0000000007062 0.58631 46.5517
384 1I4D GDP 0.00000000001195 0.84335 47.1264
385 2FJU GSP 0.000000000262 0.75582 47.1264
386 1HE1 GDP 0.0000000002456 0.65827 47.1264
387 1HE1 AF3 0.01531 0.40558 47.1264
388 2W2X GSP 0.0000000001859 0.76271 47.7011
389 4XOI GTP 0.000000001249 0.73461 47.7011
390 1G4U GDP 0.0000000008011 0.65815 47.7011
391 3REF GDP 0.000000003827 0.59977 47.7011
392 5TB5 GDP 0.0000000000002224 0.87743 48.1081
393 5TAR GDP 0.0000000000003075 0.84025 48.1081
394 2CJW GDP 0.000000000001133 0.87624 48.2759
395 4XSH GSP 0.0000000002534 0.75263 48.2759
396 1OW3 GDP 0.0000000002712 0.74724 48.2759
397 1TX4 ALF GDP 0.0000000007268 0.61433 48.2759
398 1CXZ GSP 0.0000000005244 0.74552 48.8506
399 4D0N GDP 0.0000000000316 0.74334 48.8506
400 3GJ7 GDP 0.000000000002699 0.8584 50
401 3GJ4 GDP 0.000000000003565 0.85269 50
402 3GJ5 GDP 0.000000000008414 0.82031 50
403 3GJ8 GDP 0.000000000008431 0.82027 50
404 3GJX GTP 0.00000000009814 0.79298 50
405 5JCP GDP ALF 0.000000001619 0.66338 50
406 5WRJ A3P 0.000924 0.45934 50
Pocket No.: 2; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1z0a.bio5) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1z0a.bio5) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1z0a.bio5) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: 11
This union binding pocket(no: 5) in the query (biounit: 1z0a.bio5) has 19 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2VOH CIT 0.007131 0.4042 None
2 1XPJ TLA 0.03531 0.40189 None
3 3CV2 OXL 0.02641 0.40045 3.44828
4 1BO4 COA 0.01161 0.40484 3.57143
5 3T31 FAD 0.03318 0.41082 8.04598
6 3T31 DCQ 0.03519 0.41082 8.04598
7 1T3D CYS 0.00547 0.42847 9.1954
8 1G8S MET 0.02192 0.40289 9.1954
9 4ITM ATP 0.01507 0.40036 10.4762
10 1FWV SGA MAG FUC 0.02039 0.40635 11.194
11 2WZF BGC 0.01356 0.41204 33.3333
Pocket No.: 6; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: 3
This union binding pocket(no: 6) in the query (biounit: 1z0a.bio3) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5T67 JHZ 0.04642 0.40062 5.74713
2 1NN5 2DT 0.04485 0.41197 10.9195
3 4AF0 IMP 0.007289 0.41557 17.2414
Pocket No.: 7; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 1z0a.bio7) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 1z0a.bio7) has 19 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 1z0a.bio6) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 1z0a.bio6) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: 20
This union binding pocket(no: 11) in the query (biounit: 1z0a.bio4) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1DCP HBI 0.02153 0.40559 None
2 1GHE ACO 0.01693 0.40738 1.14943
3 1I1N SAH 0.02959 0.40073 1.14943
4 2B4D COA 0.01639 0.40323 1.16959
5 2O0J ADP 0.002632 0.4174 2.29885
6 4QDI ATP 0.005894 0.41441 2.87356
7 4B9E FAH 0.007795 0.42453 3.44828
8 2VHJ ADP 0.01737 0.402 3.44828
9 3NOJ PYR 0.03254 0.40032 3.44828
10 1YXM ADE 0.0008692 0.47236 4.02299
11 1VKJ A3P 0.006826 0.42176 4.5977
12 2V5K OXM 0.01944 0.40535 5.74713
13 3R96 ACO 0.04601 0.40051 5.74713
14 3R96 AMP 0.04601 0.40051 5.74713
15 5LTJ BEF 0.000526 0.40594 6.89655
16 4W93 3L9 0.03623 0.40091 6.89655
17 1RSG FAD 0.04012 0.40806 8.62069
18 5KMS FAD 0.0422 0.40154 8.62069
19 1D6Z HY1 0.009588 0.41782 9.1954
20 1TB3 FMN 0.02882 0.40375 22.9885
Pocket No.: 12; Query (leader) PDB : 1Z0A; Ligand: GDP; Similar sites found: 4
This union binding pocket(no: 12) in the query (biounit: 1z0a.bio2) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2ZFZ ARG 0.04843 0.43084 None
2 3WQT ANP 0.0197 0.40099 4.02299
3 4M7V RAR 0.04665 0.40537 5.74713
4 1GAD NAD 0.02395 0.40409 6.32184
Feedback