Receptor
PDB id Resolution Class Description Source Keywords
1Z0K 1.92 Å NON-ENZYME: TRANSPORT STRUCTURE OF GTP-BOUND RAB4Q67L GTPASE IN COMPLEX WITH THE CENTRAL RAB BINDING DOMAIN OF RABENOSYN-5 HOMO SAPIENS RAB GTPASES RAB4 RABENOSYN EFFECTOR COMPLEX VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GTP A:1200;
C:2200;
Valid;
Valid;
none;
none;
submit data
523.18 C10 H16 N5 O14 P3 c1nc2...
MES D:1001;
Invalid;
none;
submit data
195.237 C6 H13 N O4 S C1COC...
MG A:1201;
C:2201;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1Z0K 1.92 Å NON-ENZYME: TRANSPORT STRUCTURE OF GTP-BOUND RAB4Q67L GTPASE IN COMPLEX WITH THE CENTRAL RAB BINDING DOMAIN OF RABENOSYN-5 HOMO SAPIENS RAB GTPASES RAB4 RABENOSYN EFFECTOR COMPLEX VESICULAR TRAFFICKING PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS OF FAMILY-WIDE RAB GTPASE RECOGNITION BY RABENOSYN-5. NATURE V. 436 415 2005
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 199 families.
1 1Z0K - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 166 families.
1 1Z0K - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1Z0K - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GTP; Similar ligands found: 147
No: Ligand ECFP6 Tc MDL keys Tc
1 GTP 1 1
2 GP3 0.921053 0.973684
3 GDP 0.909091 1
4 GSP 0.853659 0.948718
5 GNH 0.82716 0.986667
6 G1R 0.819277 0.986667
7 GAV 0.811765 0.961039
8 GNP 0.809524 0.973684
9 GCP 0.797619 0.973684
10 5GP 0.797468 0.986486
11 G 0.797468 0.986486
12 GMV 0.764706 0.973684
13 G2R 0.764045 0.961039
14 G5P 0.755319 0.973684
15 GTG 0.752688 0.936709
16 G2P 0.747126 0.961039
17 G3A 0.744681 0.973684
18 GDD 0.741935 0.961039
19 GKE 0.741935 0.961039
20 GDC 0.741935 0.961039
21 0O2 0.736264 0.986486
22 GP2 0.729412 0.961039
23 6CK 0.726316 0.936709
24 Y9Z 0.723404 0.902439
25 GPG 0.717391 0.961039
26 GFB 0.715789 0.961039
27 GDR 0.715789 0.961039
28 GDP MG 0.712644 0.923077
29 GDP BEF 0.704545 0.9
30 GPD 0.704082 0.925
31 JB2 0.693878 0.961039
32 GKD 0.693878 0.961039
33 GCP G 0.692308 0.935065
34 GDX 0.686869 0.973684
35 ALF 5GP 0.685393 0.888889
36 GTP MG 0.681319 0.923077
37 BEF GDP 0.681319 0.888889
38 GH3 0.681319 0.973333
39 YGP 0.677083 0.901235
40 G3D 0.67033 0.986486
41 GDP AF3 0.659574 0.888889
42 GDP ALF 0.659574 0.888889
43 DGT 0.659341 0.923077
44 GMP 0.658228 0.88
45 G4P 0.655914 0.986486
46 JB3 0.653846 0.948718
47 NGD 0.647619 0.961039
48 CAG 0.642202 0.880952
49 2MD 0.62963 0.891566
50 G G 0.622449 0.935065
51 MGP 0.619565 0.961039
52 U2G 0.616822 0.936709
53 6G0 0.612903 0.961039
54 MGD 0.612613 0.891566
55 TPG 0.608696 0.840909
56 CG2 0.605505 0.936709
57 GDP 7MG 0.601942 0.911392
58 FEG 0.601852 0.879518
59 ZGP 0.59633 0.869048
60 MD1 0.591304 0.891566
61 PGD 0.591304 0.925
62 3GP 0.590909 0.946667
63 GPX 0.581633 0.946667
64 DGI 0.580645 0.923077
65 IDP 0.576087 0.972973
66 DBG 0.567797 0.948718
67 FE9 0.555556 0.776596
68 2GP 0.555556 0.96
69 G4M 0.547619 0.880952
70 BGO 0.544643 0.924051
71 I2C FE2 CMO CMO 0.538462 0.808989
72 ATP 0.537634 0.92
73 G1G 0.533898 0.925
74 AQP 0.531915 0.92
75 5FA 0.531915 0.92
76 G A A A 0.525862 0.923077
77 U A G G 0.521368 0.935065
78 01G 0.518868 0.902439
79 ITT 0.510638 0.868421
80 P2G 0.510638 0.883117
81 GGM 0.504274 0.901235
82 G1R G1R 0.504065 0.924051
83 DGP 0.5 0.910256
84 PGD O 0.5 0.850575
85 MGO 0.5 0.864198
86 P1G 0.5 0.871795
87 DG 0.5 0.910256
88 GTA 0.495495 0.936709
89 B4P 0.489362 0.894737
90 AP5 0.489362 0.894737
91 IMP 0.489362 0.959459
92 7DT 0.484536 0.906667
93 G G U 0.482143 0.935065
94 GPC 0.479339 0.879518
95 G C 0.478992 0.9
96 BA3 0.478723 0.894737
97 ADP 0.473684 0.92
98 G2Q 0.471698 0.961039
99 G7M 0.46875 0.948052
100 25L 0.458716 0.907895
101 A2D 0.457447 0.894737
102 RGT 0.45045 0.909091
103 AGS 0.45 0.873418
104 SAP 0.45 0.873418
105 SGP 0.44898 0.82716
106 U G A 0.448529 0.888889
107 A4P 0.445378 0.869048
108 G G G RPC 0.442623 0.875
109 ACQ 0.441176 0.896104
110 ANP 0.441176 0.896104
111 8GT 0.441176 0.875
112 APC G U 0.44 0.886076
113 G U34 0.438017 0.888889
114 6AD 0.436893 0.841463
115 G G G C 0.433071 0.9125
116 UP5 0.432203 0.873418
117 35G 0.431373 0.933333
118 C2E 0.431373 0.921053
119 PCG 0.431373 0.933333
120 A G C C 0.429688 0.911392
121 5GP 5GP 0.427184 0.883117
122 TAT 0.427184 0.884615
123 APR 0.425743 0.894737
124 AR6 0.425743 0.894737
125 AN2 0.424242 0.907895
126 7DD 0.424242 0.906667
127 DG DG 0.423423 0.865854
128 AD9 0.421569 0.896104
129 M33 0.42 0.883117
130 7D4 0.42 0.835443
131 UCG 0.419847 0.911392
132 H6Y 0.419048 0.946667
133 G C C C 0.416667 0.924051
134 ACP 0.415842 0.896104
135 T5A 0.414634 0.802326
136 MGQ 0.412844 0.935897
137 ADQ 0.412844 0.871795
138 A1R 0.412844 0.839506
139 MGT 0.411215 0.823529
140 A G U 0.410072 0.888889
141 93A 0.41 0.833333
142 A22 0.407407 0.907895
143 CA0 0.405941 0.896104
144 ATF 0.40566 0.884615
145 AGO 0.404762 0.888889
146 MGV 0.401786 0.890244
147 CGP 0.4 0.86747
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1Z0K; Ligand: GTP; Similar sites found: 416
This union binding pocket(no: 1) in the query (biounit: 1z0k.bio1) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3PQC GDP 0.000000009269 0.69076 None
2 2W58 ADP 0.000001327 0.6519 None
3 3NHB ADP 0.00001121 0.58596 None
4 1GXU 2HP 0.0002015 0.49959 None
5 3H86 AP5 0.0007015 0.45316 None
6 3IIJ ADP 0.00001318 0.44282 None
7 2BEK ATP 0.0007501 0.4398 None
8 3TMK T5A 0.003161 0.41826 None
9 4GBM A3P 0.002979 0.41136 None
10 1LOJ URI 0.02625 0.40264 None
11 4KFU ACP 0.000007593 0.42656 1.16279
12 1GOJ ADP 0.0000001166 0.70533 1.74419
13 4E03 ADP 0.00003271 0.44782 1.74419
14 1NJF AGS 0.0006197 0.43415 1.74419
15 1NJF ADP 0.0003164 0.43356 1.74419
16 4ZNL BEF ADP 0.0001587 0.41549 1.74419
17 4P32 ADP 0.002059 0.41235 1.74419
18 4MKF AP5 0.001772 0.44288 2.32558
19 1BO4 COA 0.0142 0.40961 2.38095
20 4WOP CTP 0.00005053 0.4717 2.66667
21 4OHY ANP 0.00007864 0.46798 2.90698
22 3BFV ADP 0.0000418 0.43387 2.90698
23 2QG6 NMN 0.003808 0.41339 2.90698
24 4M7V RAR 0.01739 0.40265 2.90698
25 3ZFD ANP 0.00000003211 0.55663 3.48837
26 1FNN ADP 0.0001744 0.47562 3.48837
27 1ZIN AP5 0.001481 0.4452 3.48837
28 3BER AMP 0.002911 0.44341 3.48837
29 5BQ5 ADP BEF 0.0002027 0.48824 4.06977
30 2QEN ADP 0.0001675 0.43761 4.06977
31 2QZ4 ADP 0.00008239 0.43484 4.06977
32 1QF9 ADP 0.002823 0.4295 4.06977
33 1QF9 ALF 0.002823 0.4295 4.06977
34 1QF9 C5P 0.002823 0.4295 4.06977
35 5M04 GDP 0.0000000007105 0.57611 4.34783
36 3TK1 GDP 0.0000000001452 0.57511 4.34783
37 3Q9L ATP 0.00004045 0.5089 4.34783
38 3H4S ADP 0.0000002552 0.44878 4.34783
39 4FRZ ADP 0.000001191 0.44556 4.34783
40 1G8S MET 0.01208 0.42216 4.34783
41 3KJI ADP 0.00005349 0.45337 4.65116
42 4PU6 ASP 0.005027 0.44158 4.65116
43 4V03 ADP 0.00006388 0.43936 4.65116
44 4A4Z ANP 0.003672 0.43847 4.65116
45 2CHG ANP 0.000232 0.43279 4.65116
46 1G41 ADP 0.000184 0.42451 4.65116
47 1VHT BA3 0.0004554 0.41188 4.65116
48 1QAN SAH 0.005096 0.40176 4.65116
49 2RCN GDP 0.00000000005499 0.61868 5.23256
50 3MD0 GDP 0.0000000007105 0.57031 5.23256
51 4BQS ADP 0.00002731 0.54268 5.23256
52 4QOS ADP 0.00008782 0.5052 5.23256
53 4R43 GDP 0.0002343 0.49699 5.23256
54 1LVG ADP 0.000001317 0.45244 5.23256
55 4BQS K2Q 0.001098 0.44607 5.23256
56 1ION ADP 0.0000817 0.43704 5.23256
57 5VGR GDP 0.0005264 0.45917 5.7971
58 2VVG ADP 0.0000001454 0.44157 5.7971
59 5LB3 ADP 0.00004301 0.42406 5.7971
60 2WHX ADP 0.00001748 0.40923 5.7971
61 3B9Q MLI 0.00002966 0.56366 5.81395
62 4YS0 ADP 0.001142 0.44414 5.81395
63 5GJC ATP 0.00004025 0.42915 5.81395
64 1T5C ADP 0.0000007879 0.42363 5.81395
65 1NY5 ADP 0.000424 0.42231 5.81395
66 1XMV ADP 0.0001599 0.41433 5.81395
67 3BOS CDP 0.0001 0.41324 5.81395
68 4P4T GDP 0.000001755 0.56287 6.39535
69 1G6O ADP 0.0000255 0.53026 6.39535
70 2BIF SIN 0.001287 0.45117 6.39535
71 2BIF ANP 0.0007254 0.45117 6.39535
72 4MKG AP5 0.00149 0.44509 6.39535
73 3QKT ANP 0.0009698 0.43325 6.39535
74 1IN4 ADP 0.0007576 0.41819 6.39535
75 1OFH ADP 0.0003312 0.41665 6.39535
76 3R7F CP 0.02039 0.41164 6.39535
77 4FCW ADP 0.0006724 0.40298 6.39535
78 3FKQ ATP 0.0000401 0.50907 6.97674
79 5IFS ADP 0.00006389 0.43817 6.97674
80 1RRC ADP 0.00000349 0.41368 6.97674
81 2C78 GNP 0.00000000001097 0.76827 7.24638
82 4RD0 GDP 0.000000000004702 0.76057 7.24638
83 2C77 GNP 0.00000000001391 0.72947 7.24638
84 3LRE ADP 0.0000005416 0.6655 7.24638
85 2QN6 GDP 0.0000000001673 0.59073 7.24638
86 3B7G ANP 0.0001299 0.50322 7.24638
87 4IEE AGS 0.0003841 0.49262 7.24638
88 3VX3 ADP 0.00006373 0.46142 7.24638
89 1UKZ ADP 0.003154 0.42374 7.24638
90 1T3D CYS 0.01144 0.41876 7.24638
91 4DCT GDP 0.00000000008408 0.62311 7.55814
92 3DZD ADP 0.0002113 0.43201 7.55814
93 2JLR ANP 0.0001652 0.43108 7.55814
94 1MKY GDP 0.0000000001113 0.60621 8.13953
95 5L3V GDP 0.000002164 0.49411 8.13953
96 1JJV ATP 0.0000229 0.414 8.13953
97 2AWN ADP 0.0000003961 0.69022 8.69565
98 4B47 GDP 0.00000000006939 0.60046 8.69565
99 3EC1 GDP 0.000000003077 0.57962 8.69565
100 2XTN GTP 0.000001004 0.5541 8.69565
101 2XT3 ADP 0.000000218 0.45056 8.69565
102 4XGU ADP 0.00009352 0.44936 8.69565
103 3FB4 AP5 0.001713 0.44243 8.69565
104 5I34 GDP 0.00007271 0.43925 8.69565
105 3RLF ANP 0.0008462 0.43384 8.69565
106 2FAH GDP 0.0007467 0.41191 8.69565
107 3QF7 ANP 0.001229 0.41043 8.69565
108 2VF7 ADP 0.0002843 0.40925 8.69565
109 5WRJ A3P 0.00532 0.40265 8.69565
110 3U6B GDP 0.0000000001016 0.82276 8.72093
111 2BVN GNP 0.00000000001773 0.8048 8.72093
112 3U6K GDP 0.0000000006809 0.76798 8.72093
113 1TQ4 GDP 0.00000001169 0.64945 8.72093
114 1D8T GDP 0.0000000003115 0.59511 8.72093
115 5JBQ GDP 0.0000000003491 0.5937 8.72093
116 4G5G GDP 0.0000000003834 0.59233 8.72093
117 4P3Y GDP 0.0000000001457 0.59126 8.72093
118 4PC3 GDP 0.00000002494 0.57234 8.72093
119 5I0H ADP BEF 0.0000002039 0.56435 8.72093
120 3EZ2 ADP 0.0001474 0.51351 8.72093
121 4IDN GNP 0.0000387 0.4825 8.72093
122 4QRH 0O2 0.003008 0.40041 8.72093
123 4TTQ ATP 0.00005512 0.42962 9.30233
124 4QM7 GTP 0.00002274 0.43387 9.35672
125 5HR5 ADP 0.0004216 0.42119 9.88372
126 1F2U ATP 0.001162 0.43343 10.1351
127 4LPS GDP 0.0000001016 0.65162 10.1449
128 3DC4 ADP 0.0000002963 0.47587 10.1449
129 1Y63 ADP 0.000006479 0.4541 10.1449
130 3VM7 GLC 0.00958 0.43647 10.1449
131 2OZE AGS 0.0002903 0.43619 10.1449
132 3P4X ADP 0.00004192 0.42385 10.1449
133 4PX9 ADP 0.00004516 0.42006 10.1449
134 2J5V PCA 0.04805 0.40787 10.1449
135 1FQJ ALF 0.0000003895 0.66099 10.4651
136 1FQK ALF 0.000001466 0.63391 10.4651
137 1FQJ GDP 0.0000001051 0.59439 10.4651
138 1FQK GDP 0.0000002437 0.57937 10.4651
139 1GOT GDP 0.000001301 0.54288 10.4651
140 5KSZ GCP 0.0000001403 0.53684 10.4651
141 5KSP GDP 0.00000009641 0.53164 10.4651
142 3E70 GDP 0.000002291 0.48604 10.4651
143 2RGX AP5 0.002159 0.44016 10.4651
144 2ZTS ADP 0.0006364 0.45106 10.757
145 2CBZ ATP 0.0000009664 0.6591 11.0465
146 2HF9 GSP 0.00000009054 0.62717 11.0465
147 1DAR GDP 0.00000002197 0.54814 11.0465
148 3MWL 8OX 0.0213 0.40909 11.0465
149 4ZKD GDP 0.00000000002263 0.75557 11.5942
150 4AG5 ADP 0.000004894 0.60475 11.5942
151 4YDS ATP 0.000006655 0.58994 11.5942
152 2IYL GDP 0.00000523 0.57781 11.5942
153 4H1V GNP 0.000004385 0.55197 11.5942
154 4WZA ACP 0.0000327 0.53822 11.5942
155 4WZA ADP 0.00003289 0.5381 11.5942
156 1FP6 ADP 0.00004889 0.511 11.5942
157 1ZUI SKM 0.00007718 0.49597 11.5942
158 1QF5 GDP 0.0002852 0.48661 11.5942
159 4Q1A UDP 0.006817 0.46315 11.5942
160 4Q1A 2XZ 0.006817 0.46315 11.5942
161 1QF5 RPL 0.009265 0.44566 11.5942
162 4GOX A3P 0.0008652 0.43344 11.5942
163 4D81 ADP 0.000205 0.42653 11.5942
164 1K6M AGS 0.00153 0.42326 11.5942
165 5XDR ADP 0.0001739 0.41405 11.5942
166 3DKP ADP 0.0001334 0.41225 11.5942
167 2PZE ATP 0.000004443 0.41138 11.5942
168 4WZ6 ATP 0.00002262 0.40662 11.5942
169 1R0X ATP 0.0001627 0.40649 11.5942
170 5FTB ANP 0.0001083 0.50096 11.6279
171 5FHD ADP ALF 0.0001238 0.47726 11.6279
172 1YTM ATP 0.0003448 0.45822 11.6279
173 4O48 ASP 0.01034 0.42766 11.6279
174 4OI4 ATP 0.001692 0.42147 12.1739
175 2FNA ADP 0.000395 0.45148 12.2093
176 1YRB GDP 0.00000000004765 0.78521 13.0435
177 2GJ8 ALF GDP 0.0000000001837 0.66318 13.0435
178 1JWY GDP 0.00000285 0.50084 13.0435
179 2WOJ ADP ALF 0.00005445 0.48897 13.0435
180 2Q2Y ADP 0.0002615 0.47827 13.0435
181 2Q2Y MKR 0.0002538 0.47758 13.0435
182 3ZS9 ADP ALF 0.00003717 0.46692 13.0435
183 4XVU ATP 0.0001611 0.46346 13.0435
184 4XTR ATP 0.0001645 0.46308 13.0435
185 1IHU ADP 0.0001697 0.46253 13.0435
186 1IHU AF3 0.0001392 0.45987 13.0435
187 1JWY ADP 0.000009484 0.45755 13.0435
188 4XTR ADP 0.0001426 0.44893 13.0435
189 1P9B GDP 0.0001403 0.44645 13.0435
190 1S3G AP5 0.001432 0.44584 13.0435
191 3FVQ ATP 0.0007064 0.44489 13.0435
192 1HTW ADP 0.00003502 0.44049 13.0435
193 5G41 AP5 0.003116 0.43609 13.0435
194 1KO8 6PG 0.0003023 0.43341 13.0435
195 5MVR ADP 0.0000369 0.43186 13.0435
196 3BFX A3P 0.002395 0.4259 13.0435
197 5M7P ADP 0.0005216 0.42472 13.0435
198 3Q9T FAY 0.0294 0.41325 13.0435
199 2PL3 ADP 0.00008889 0.41221 13.0435
200 1NHX FTB 0.01332 0.40697 13.0435
201 1NHX PEP 0.01334 0.40603 13.0435
202 2GMV UN8 0.006459 0.40373 13.0435
203 4ZG4 VO4 ADP 0.0000006553 0.56171 13.3721
204 4HSE ADP 0.00003559 0.53008 13.3721
205 1M7G ADX 0.0002168 0.47064 13.3721
206 1M7G ADP 0.0002433 0.46528 13.3721
207 1M7G AV2 0.000003507 0.45191 13.3721
208 5KUT GDP 0.000000003704 0.57268 13.9535
209 4RZ3 ADP 0.00008921 0.44925 13.9535
210 3WY9 GDP 0.000000000125 0.81824 14.4928
211 3WYA GDP 0.000000000693 0.58656 14.4928
212 1SKQ GDP 0.000000006833 0.54813 14.4928
213 2GDJ ANP 0.0001366 0.50847 14.4928
214 1SQ5 ADP 0.000131 0.50305 14.4928
215 5IRN ADP 0.00002582 0.45892 14.4928
216 5K5Z ANP 0.0003204 0.45313 14.4928
217 1OS1 PYR 0.002131 0.42696 14.4928
218 1XKV ATP 0.0001413 0.42693 14.4928
219 2IS6 ADP 0.00003895 0.4265 14.4928
220 1OS1 ATP 0.002171 0.42516 14.4928
221 1CR1 TTP 0.0007698 0.42435 14.4928
222 2VOH CIT 0.009031 0.42148 14.4928
223 3FYH ADP 0.001534 0.41624 14.4928
224 5TIV A3P 0.01682 0.40155 14.4928
225 1Q20 A3P 0.01052 0.40121 14.4928
226 1Q20 PLO 0.01052 0.40121 14.4928
227 3EWA ANP 0.00004412 0.42512 14.5349
228 2Y65 ADP 0.000001041 0.43449 15.1163
229 4CVN ADP 0.000008486 0.5845 15.3285
230 5GOE GDP 0.000000003687 0.70945 15.942
231 5CK5 GDP 0.0000000003151 0.58509 15.942
232 2DPY ADP 0.0000645 0.53911 15.942
233 1G3Q ADP 0.00004161 0.52684 15.942
234 3UIE ANP 0.00002764 0.4489 15.942
235 5TSH ANP 0.000009196 0.44708 15.942
236 5H56 TYD 0.0008198 0.44455 15.942
237 5H56 ADP 0.0008198 0.44455 15.942
238 5TSH ADP 0.000009238 0.42219 15.942
239 1YQT ADP 0.00001661 0.41067 15.942
240 1PUJ GNP 0.000000001801 0.61284 16.8605
241 4PPF FLC 0.000003371 0.62316 17.3913
242 1KK8 BEF ADP 0.000006334 0.54484 17.3913
243 1B7T ADP 0.00003876 0.52178 17.3913
244 1IWE IMP 0.0003125 0.51438 17.3913
245 5J1J ANP 0.00009236 0.47339 17.3913
246 1P4V GLY 0.009931 0.42742 17.3913
247 1W5T ANP 0.003277 0.40045 17.3913
248 3IO3 ADP 0.0001793 0.4443 18.0233
249 3VMF GTP 0.00000000002759 0.74863 18.8406
250 2XTZ GSP 0.0000000002327 0.71015 18.8406
251 1WDT GTP 0.0000000007503 0.71004 18.8406
252 5IRR GSP 0.00000001035 0.64356 18.8406
253 4HI0 GDP 0.000001017 0.56647 18.8406
254 2B8W ALF 5GP 0.000005128 0.52736 18.8406
255 2ZR9 DTP 0.00009828 0.51546 18.8406
256 1F5N GNP 0.000004575 0.50045 18.8406
257 2VB6 ADP BEF 0.00002653 0.49565 18.8406
258 4PFO ADP 0.00004612 0.49 18.8406
259 1V8K ANP 0.0000008062 0.48868 18.8406
260 4LYA ATP 0.00001177 0.46057 18.8406
261 2HCJ GDP 0.00000000008009 0.59738 18.9189
262 3CNL GNP 0.000000003258 0.55268 19.7674
263 5L3W GDP 0.000007385 0.47576 19.7674
264 2X77 GDP 0.0000000002256 0.77839 20.1058
265 3WXM GTP 0.0000000000536 0.73665 20.2899
266 5L3R GCP 0.000002703 0.52674 20.2899
267 2OBM ADP 0.0003499 0.50948 20.2899
268 3DEF GDP 0.000002201 0.50262 20.2899
269 2C04 GCP 0.00005906 0.50157 20.2899
270 2CE7 ADP 0.0000512 0.44056 20.2899
271 2KIN ADP 0.0000002265 0.43537 20.2899
272 1BG2 ADP 0.0000002479 0.43513 20.2899
273 2ZPA ADP 0.0002771 0.43502 20.2899
274 1NN5 ANP 0.002882 0.42278 20.2899
275 5HCN GCP 0.0000000001567 0.62237 20.3488
276 5L3S GNP 0.00001336 0.51018 20.3488
277 1UJ2 C5P 0.001719 0.42632 20.3488
278 1UJ2 ADP 0.00279 0.41752 20.3488
279 1UPT GTP 0.000000000003812 0.76445 21.0526
280 1G7S GDP 0.000000002449 0.72892 21.5116
281 2NCD ADP 0.0000013 0.63424 21.7391
282 1H65 GDP 0.00001826 0.49618 21.7391
283 5N69 ADP 0.00001292 0.46942 21.7391
284 1F9V ADP 0.0000008784 0.44965 21.7391
285 2ODE ALF GDP 0.000000001567 0.68428 22.093
286 3T34 GDP 0.00002135 0.49953 22.093
287 1QHH ATP 0.009149 0.41486 22.6744
288 3FWY ADP 0.00001961 0.47308 23.1884
289 1R6B ADP 0.0001933 0.41984 23.1884
290 1Z6T ADP 0.0001147 0.4887 24.6377
291 4J0Q GDP 0.0000000008254 0.7771 25
292 1AZT GSP 0.000000001024 0.69209 25
293 1TAD GDP 0.000000002413 0.67638 25
294 1TAD ALF 0.000000002413 0.67638 25
295 1CS4 GSP 0.000000001152 0.62682 25
296 1KK1 GNP 0.000000003466 0.55751 25
297 3A4M ADP 0.000006419 0.43233 25.5814
298 4IHQ ADP 0.000092 0.40727 26.087
299 1WF3 GNP 0.0000000005971 0.69619 26.1628
300 3KTA AP5 0.0002715 0.47702 27.5362
301 2IXE ATP 0.0002682 0.44891 27.5362
302 1XEX ATP 0.00167 0.40849 27.5362
303 5J1S ATP 0.0008806 0.43498 27.6423
304 2QTV GNP 0.000000000459 0.69469 28.1437
305 1W7J ADP BEF 0.000003869 0.55439 28.9855
306 4IOK ADP 0.0009607 0.43852 28.9855
307 4IOK XPO 0.0007973 0.43676 28.9855
308 2F5X ASP 0.03134 0.40256 28.9855
309 4TMZ GSP 0.000000000007388 0.76507 29.0698
310 1D2E GDP 0.00000001226 0.58124 29.6512
311 5FG3 GDP 0.00000000004954 0.60206 30.2326
312 3QXC ATP 0.001551 0.40625 30.4348
313 3AQ4 GDP 0.000000003511 0.72144 30.814
314 3CX8 GSP 0.0000000004894 0.70561 30.814
315 1ZCB GDP 0.0000001443 0.59409 30.814
316 3AB3 GDP 0.0000001037 0.5789 30.814
317 2A5F GTP 0.00000000006461 0.72989 31.3953
318 3PCR GTP 0.0000000001702 0.70907 32.0988
319 4KAX GTP 0.000000000002673 0.77105 32.5444
320 4NCN GTP 0.000000000001291 0.79621 32.5581
321 2J59 GTP 0.000000000005617 0.76996 33.1325
322 1SVK ALF GDP 0.000000002427 0.67889 33.1395
323 1BH2 GSP 0.000000003134 0.67158 33.1395
324 2OM2 GDP 0.0000008779 0.56921 33.1395
325 1Y3A GDP 0.0000006611 0.56156 33.1395
326 5KDO GDP 0.000001491 0.55937 33.1395
327 1GP2 GDP 0.000001996 0.54183 33.1395
328 2W83 GTP 0.000000000008407 0.76277 33.3333
329 4LC1 GDP 0.0000000009285 0.76139 33.3333
330 3N5C GDP 0.000000001626 0.74948 33.3333
331 5LTJ ADP 0.00006552 0.42917 33.3333
332 2XAU ADP 0.0002578 0.41528 33.3333
333 4M9Q GNP 0.000000000006133 0.77886 33.7209
334 5DI3 GNP 0.00000000002524 0.7531 33.7209
335 2C9O ADP 0.0002115 0.4673 34.7826
336 4BAS GNP 0.0000000002662 0.69085 34.8837
337 4YLG GDP 0.000000003637 0.6113 36.0465
338 2ZEJ GDP 0.0000001594 0.59481 36.0465
339 2FH5 GTP 0.0000000000003126 0.79328 36.6279
340 4U5X GNP 0.000000000001645 0.74973 36.6279
341 1G7C 5GP 0.0000001199 0.65806 37.6812
342 2CK3 ANP 0.0004283 0.45857 37.6812
343 1W0J ADP 0.00003377 0.45661 37.6812
344 2V7Q ATP 0.00002079 0.45576 37.6812
345 2CK3 ADP 0.0006687 0.43805 37.6812
346 1W0J ADP BEF 0.0004108 0.43012 37.6812
347 2V7Q ADP 0.00008384 0.42248 37.6812
348 3T12 GDP ALF 0.000000001434 0.67955 37.7907
349 3T1O GDP 0.0000001218 0.54311 37.7907
350 3ZQ6 ADP ALF 0.00003465 0.49717 39.1304
351 5EE5 GTP 0.0000000000008311 0.791 39.1813
352 4ZI2 GNP 0.000000000001372 0.78208 39.5349
353 4GOJ GNP 0.000000000001743 0.77803 39.5349
354 1FZQ GDP 0.0000000001864 0.60433 39.779
355 1MR3 G3D 0.000000001162 0.59398 40.1163
356 2OFW ADX 0.0004969 0.46481 40.5797
357 1X6V ADP 0.0004525 0.41373 40.5797
358 3REF GDP 0.00000000021 0.71452 40.6977
359 1KSH GDP 0.000000000001626 0.76509 41.2791
360 4V0K GDP 0.0000001185 0.58003 41.4201
361 3DOE GTP 0.00000000001029 0.75916 41.8605
362 4YC7 GNP 0.00000000001071 0.746 43.0233
363 1SVI GDP 0.0000000002809 0.58092 43.0233
364 3Q85 GNP 0.000000000009907 0.63793 43.1953
365 2PEZ GGZ 0.0004354 0.45924 43.4783
366 2PEZ DAT 0.0004354 0.45924 43.4783
367 1A4R GDP 0.00000000001105 0.71959 43.6047
368 1A4R GNH 0.000000000007647 0.71185 43.6047
369 2WMO GTP 0.000000000001835 0.70115 43.6047
370 1GRN GDP 0.00000000009796 0.66948 43.6047
371 2NGR GDP 0.00000000003859 0.64178 43.6047
372 4ITR GDP 0.000000001888 0.63285 43.6047
373 4DID GDP 0.00000000009862 0.62662 43.6047
374 1GRN AF3 0.0000001459 0.49102 43.6047
375 2NGR AF3 0.0000002225 0.48925 43.6047
376 1NF3 GNP 0.000000000006794 0.77393 44.186
377 1M7B GTP 0.00000000003484 0.75751 44.7674
378 1GWN GTP 0.0000000000376 0.71393 44.7674
379 2CJW GDP 0.00000000001525 0.63312 45.3488
380 2HT6 GDP 0.000000000008948 0.62521 45.3488
381 5IRC GDP 0.000000003686 0.58929 45.3488
382 1XTQ GDP 0.00000000005843 0.72816 45.7627
383 3Q72 GNP 0.0000000000148 0.61864 45.7831
384 5JCP GDP ALF 0.00000000002597 0.78525 45.9302
385 1TX4 ALF GDP 0.00000000001407 0.75357 45.9302
386 4XSH GSP 0.000000000004757 0.73301 45.9302
387 1RYH GNP 0.0000000000004661 0.72119 45.9302
388 1HE1 GDP 0.000000001198 0.69178 45.9302
389 1OW3 GDP 0.0000000005278 0.64421 45.9302
390 5HPY GDP 0.0000000009435 0.6345 45.9302
391 1HE1 AF3 0.000008625 0.58414 45.9302
392 3ZIA ADP 0.00007003 0.44516 46.0317
393 3ZIA ATP 0.00002898 0.44308 46.0317
394 1X1R GDP 0.00000000002047 0.75739 46.0674
395 3SBD GNP 0.000000000002193 0.79434 46.5116
396 1KMQ GNP 0.00000000000299 0.78122 46.5116
397 1CXZ GSP 0.000000000003562 0.76606 46.5116
398 4XOI GTP 0.000000000008889 0.7655 46.5116
399 3LXR GDP 0.0000000002397 0.76484 46.5116
400 2W2X GSP 0.000000000002328 0.75924 46.5116
401 1DS6 GDP 0.000000000006551 0.646 46.5116
402 2J0V GDP 0.00000000005225 0.6334 46.5116
403 1I4D GDP 0.000000000006897 0.62974 46.5116
404 4D0N GDP 0.0000000002362 0.59762 46.5116
405 1MH1 GNP 0.000000000001532 0.80442 47.093
406 1E96 GTP 0.000000000002402 0.7927 47.093
407 2FJU GSP 0.0000000000006732 0.78038 47.093
408 5UQW GDP 0.000000000008619 0.76605 47.093
409 1G4U GDP 0.000000004047 0.67806 47.093
410 3T5G GDP 0.00000000004408 0.64955 47.093
411 1G4U AF3 0.00001958 0.57155 47.093
412 2GCO GNP 0.000000000002564 0.72848 47.6744
413 2GCN GDP 0.0000000001533 0.69951 47.6744
414 5TAR GDP 0.00000000002309 0.79957 48.1081
415 5TB5 GDP 0.000000000008373 0.67313 48.1081
416 2WKQ GTP 0.000000000009391 0.76079 48.2558
417 3E5H GNP 0.00000000001027 0.76647 50
Pocket No.: 2; Query (leader) PDB : 1Z0K; Ligand: GTP; Similar sites found: 9
This union binding pocket(no: 2) in the query (biounit: 1z0k.bio2) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5MEX SZZ 0.01136 0.40422 2.90698
2 2ZFZ ARG 0.04298 0.41145 5.06329
3 1IK4 PGH 0.01446 0.4053 8.69565
4 5WRI A3P 0.003791 0.40278 8.69565
5 3GD4 NAD 0.02471 0.41344 10.1449
6 3GD4 FAD 0.01655 0.41344 10.1449
7 1DCP HBI 0.02783 0.40041 10.5769
8 5DRB 5FJ 0.01896 0.40096 11.5942
9 3CV2 OXL 0.02381 0.40642 15.942
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