Receptor
PDB id Resolution Class Description Source Keywords
2ARX 2 Å NON-ENZYME: BINDING PTEROCARPUS ANGOLENSIS SEED LECTIN IN COMPLEX WITH THE DECAS NA2F PTEROCARPUS ANGOLENSIS LECTIN CARBOHYDRATE LEGUME LECTIN SUGAR BINDING PROTEIN
Ref.: STRUCTURAL BASIS FOR THE RECOGNITION OF COMPLEX-TYP BIANTENNARY OLIGOSACCHARIDES BY PTEROCARPUS ANGOLEN LECTIN. FEBS J. V. 273 2407 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:253;
B:254;
Part of Protein;
Part of Protein;
none;
none;
submit data
40.078 Ca [Ca+2...
MAN MAN A:901;
Valid;
none;
submit data
342.297 n/a O(C1O...
MN A:903;
B:919;
Part of Protein;
Part of Protein;
none;
none;
submit data
54.938 Mn [Mn+2...
NAG B:918;
Invalid;
none;
submit data
221.208 C8 H15 N O6 CC(=O...
NAG MAN BMA NDG MAN NAG GAL B:900;
Valid;
none;
submit data
1276.16 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2AR6 1.8 Å NON-ENZYME: BINDING PTEROCARPUS ANGOLENSIS LECTIN (PAL) IN COMPLEX WITH THE PENTASACCHARIDE M592 PTEROCARPUS ANGOLENSIS LECTIN CARBOHYDRATE RECOGNITION SUGAR BINDING PROTEIN
Ref.: STRUCTURAL BASIS FOR THE RECOGNITION OF COMPLEX-TYP BIANTENNARY OLIGOSACCHARIDES BY PTEROCARPUS ANGOLEN LECTIN. FEBS J. V. 273 2407 2006
Members (8)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 1S1A - MAN MMA n/a n/a
2 2ARB Ka = 26000 M^-1 NAG MAN n/a n/a
3 1N3Q - GLC BDF n/a n/a
4 2AR6 Ka = 63000 M^-1 NAG MAN MAN MAN NAG n/a n/a
5 1N3O - GYP C7 H14 O6 CO[C@@H]1[....
6 1N3P - GLC FRU n/a n/a
7 2ARX - MAN MAN n/a n/a
8 2ARE Ka = 1900 M^-1 MAN C6 H12 O6 C([C@@H]1[....
70% Homology Family (12)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 1S1A - MAN MMA n/a n/a
2 2ARB Ka = 26000 M^-1 NAG MAN n/a n/a
3 1N3Q - GLC BDF n/a n/a
4 2AR6 Ka = 63000 M^-1 NAG MAN MAN MAN NAG n/a n/a
5 1N3O - GYP C7 H14 O6 CO[C@@H]1[....
6 1N3P - GLC FRU n/a n/a
7 2ARX - MAN MAN n/a n/a
8 2ARE Ka = 1900 M^-1 MAN C6 H12 O6 C([C@@H]1[....
9 3ZYR Kd = 4.6 uM ASN NAG NAG BMA MAN MAN NAG NAG n/a n/a
10 3ZVX - MAN MAN MAN n/a n/a
11 5EYX - MDM C13 H24 O11 CO[C@@H]1[....
12 5EYY - MDM C13 H24 O11 CO[C@@H]1[....
50% Homology Family (59)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 5T54 Kd = 0.87 nM A2G GLA FUC n/a n/a
2 5T5J Kd = 0.73 nM ACA SER SER VAL GLY A2G n/a n/a
3 5T52 Kd = 0.54 nM NGA C8 H15 N O6 CC(=O)N[C@....
4 5T5L Kd = 0.73 nM ACE SER SER VAL GLY A2G n/a n/a
5 5T5P Kd = 0.71 nM ACE SER THR VAL GLY A2G n/a n/a
6 1FNZ - A2G C8 H15 N O6 CC(=O)N[C@....
7 1S1A - MAN MMA n/a n/a
8 2ARB Ka = 26000 M^-1 NAG MAN n/a n/a
9 1N3Q - GLC BDF n/a n/a
10 2AR6 Ka = 63000 M^-1 NAG MAN MAN MAN NAG n/a n/a
11 1N3O - GYP C7 H14 O6 CO[C@@H]1[....
12 1N3P - GLC FRU n/a n/a
13 2ARX - MAN MAN n/a n/a
14 2ARE Ka = 1900 M^-1 MAN C6 H12 O6 C([C@@H]1[....
15 1LED - FUC GAL MAG FUC n/a n/a
16 1GSL - FUC GAL MAG FUC n/a n/a
17 1V00 - LAT C12 H22 O11 C([C@@H]1[....
18 3N3H - CIT C6 H8 O7 C(C(=O)O)C....
19 3N36 - GLA C6 H12 O6 C([C@@H]1[....
20 1AX0 Ka = 1340 M^-1 A2G C8 H15 N O6 CC(=O)N[C@....
21 1UZY - GAL BGC n/a n/a
22 1LTE - BGC GAL n/a n/a
23 1AX1 Ka = 1940 M^-1 BGC GAL n/a n/a
24 1AX2 Ka = 9730 M^-1 NDG GAL n/a n/a
25 1GZC Kd = 0.32 mM LAT C12 H22 O11 C([C@@H]1[....
26 3N35 - A2G C8 H15 N O6 CC(=O)N[C@....
27 1AXZ Ka = 1570 M^-1 GAL C6 H12 O6 C([C@@H]1[....
28 1GZ9 Kd = 0.31 mM FUC LAT n/a n/a
29 3ZYR Kd = 4.6 uM ASN NAG NAG BMA MAN MAN NAG NAG n/a n/a
30 3ZVX - MAN MAN MAN n/a n/a
31 5KXE Kd = 5.45 uM 6Y2 C22 H31 N3 O13 CC(=O)N[C@....
32 5KXB - NGA C8 H15 N O6 CC(=O)N[C@....
33 5KXC - 6Y2 C22 H31 N3 O13 CC(=O)N[C@....
34 5KXD - 6Y2 C22 H31 N3 O13 CC(=O)N[C@....
35 4WV8 - LBT C12 H22 O11 C([C@@H]1[....
36 4U2A - A2G C8 H15 N O6 CC(=O)N[C@....
37 4U36 - TNR C11 H20 N2 O8 CC(=O)N[C@....
38 1JXN - MFU C7 H14 O5 C[C@H]1[C@....
39 3WCS - MAN NAG GAL n/a n/a
40 3WOG - MAN NAG n/a n/a
41 5EYX - MDM C13 H24 O11 CO[C@@H]1[....
42 5EYY - MDM C13 H24 O11 CO[C@@H]1[....
43 2BQP - GLC C6 H12 O6 C([C@@H]1[....
44 5T7P - XMM C14 H15 Br Cl N O6 c1cc(c(c2c....
45 2DVA - GAL MGC n/a n/a
46 2DV9 - GAL GAL n/a n/a
47 1V6K - GAL GLC n/a n/a
48 1V6L - GAL BGC n/a n/a
49 2DVD - GAL GAL n/a n/a
50 2TEP - GAL NGA n/a n/a
51 2DVB - GAL C6 H12 O6 C([C@@H]1[....
52 1V6I - GAL GLC n/a n/a
53 2PEL Ki = 1.37 mM LAT C12 H22 O11 C([C@@H]1[....
54 1G9F - GAL NAG GAL NAG GAL n/a n/a
55 2DTW - 2GS C7 H14 O6 CO[C@@H]1[....
56 1WBL - AMG C7 H14 O6 CO[C@@H]1[....
57 2ZMK - GLA EGA n/a n/a
58 2D3S - TNR C11 H20 N2 O8 CC(=O)N[C@....
59 2FMD - MAN MAN n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: MAN MAN; Similar ligands found: 243
No: Ligand ECFP6 Tc MDL keys Tc
1 MAN MAN 1 1
2 BGC BGC 1 1
3 2M4 1 1
4 BMA BMA MAN 0.886364 0.970588
5 MAN MAN BMA 0.808511 1
6 MAN MAN MAN GLC 0.690909 1
7 FUC GAL 0.66 0.941176
8 GAL NAG MAN 0.612903 0.733333
9 MAN NAG GAL 0.612903 0.733333
10 BGC GLC 0.612245 1
11 GLC BGC 0.612245 1
12 B2G 0.612245 1
13 GLA GAL 0.612245 1
14 LAT 0.612245 1
15 GLC GAL 0.612245 1
16 CBK 0.612245 1
17 BGC GAL 0.612245 1
18 MAL MAL 0.612245 0.970588
19 GLA GLA 0.612245 1
20 GAL GLC 0.612245 1
21 BMA GAL 0.612245 1
22 MAB 0.612245 1
23 GAL BGC 0.612245 1
24 CBI 0.612245 1
25 BMA BMA 0.612245 1
26 BGC BMA 0.612245 1
27 LB2 0.612245 1
28 MAN GLC 0.612245 1
29 LBT 0.612245 1
30 N9S 0.612245 1
31 M3M 0.612245 1
32 MAL 0.612245 1
33 TRE 0.595238 1
34 GLA MBG 0.591837 0.942857
35 BGC BGC BGC ASO BGC BGC ASO 0.584906 1
36 GLC BGC BGC BGC BGC BGC BGC 0.584906 1
37 BGC BGC BGC 0.584906 1
38 BGC BGC BGC GLC BGC BGC 0.584906 1
39 BGC BGC BGC BGC BGC 0.584906 1
40 GLC BGC BGC BGC 0.584906 1
41 M6P MAN MAN 0.580645 0.785714
42 BMA MAN MAN 0.571429 1
43 GLA GAL GLC 0.566038 1
44 BGC GLC GLC GLC 0.566038 1
45 GAL GAL GAL 0.566038 1
46 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.566038 1
47 BGC BGC BGC BGC BGC BGC 0.566038 1
48 BMA MAN BMA 0.566038 1
49 GLC BGC BGC BGC BGC 0.566038 1
50 CE6 0.566038 1
51 BGC GLC GLC GLC GLC GLC GLC 0.566038 1
52 MTT 0.566038 1
53 GLC BGC BGC 0.566038 1
54 CEY 0.566038 1
55 MT7 0.566038 1
56 CE5 0.566038 1
57 BMA BMA BMA BMA BMA BMA 0.566038 1
58 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.566038 1
59 BGC BGC BGC GLC 0.566038 1
60 GLC GLC GLC GLC GLC GLC GLC GLC 0.566038 1
61 MLR 0.566038 1
62 BMA BMA BMA 0.566038 1
63 CEX 0.566038 1
64 BGC GLC GLC 0.566038 1
65 CTR 0.566038 1
66 BGC GLC GLC GLC GLC 0.566038 1
67 GLC BGC GLC 0.566038 1
68 CT3 0.566038 1
69 GLC GLC BGC GLC GLC GLC GLC 0.566038 1
70 MAN MAN BMA BMA BMA BMA 0.566038 1
71 CTT 0.566038 1
72 DXI 0.566038 1
73 MAN BMA BMA BMA BMA 0.566038 1
74 GLC GAL GAL 0.566038 1
75 BMA BMA BMA BMA BMA 0.566038 1
76 B4G 0.566038 1
77 MAN BMA BMA 0.566038 1
78 GLC BGC BGC BGC BGC BGC 0.566038 1
79 CE8 0.566038 1
80 GLC GLC GLC GLC GLC GLC GLC 0.566038 1
81 GLC GLC GLC GLC GLC 0.566038 1
82 GLC GLC BGC 0.566038 1
83 LAT GLA 0.56 1
84 MAN BMA BMA BMA BMA BMA 0.553571 0.970588
85 BMA BMA BMA BMA BMA BMA MAN 0.553571 0.970588
86 BGC BGC GLC 0.553571 1
87 MAN NAG 0.551724 0.733333
88 GLA GAL GAL 0.54386 1
89 GLA GAL BGC 0.54386 1
90 GAL GAL FUC 0.542373 0.970588
91 GLA GAL FUC 0.542373 0.970588
92 GLA GLA FUC 0.542373 0.970588
93 FUC GLA GLA 0.542373 0.970588
94 FUC GAL GLA 0.542373 0.970588
95 U63 0.537037 0.891892
96 GAL FUC 0.537037 0.941176
97 RZM 0.528302 0.688889
98 M13 0.528302 0.942857
99 MDM 0.528302 0.942857
100 GAL MBG 0.528302 0.942857
101 DR5 0.528302 0.942857
102 MMA MAN 0.528302 0.942857
103 GLA EGA 0.527273 0.942857
104 DOM 0.518519 0.942857
105 BMA MAN 0.518519 0.914286
106 FMO 0.508772 0.868421
107 A2G GAL 0.508475 0.733333
108 GAL A2G 0.508475 0.733333
109 GAL NGA 0.508475 0.733333
110 BGC BGC BGC BGC BGC BGC BGC BGC 0.508197 1
111 BGC BGC BGC BGC 0.508197 1
112 MAL EDO 0.491228 0.942857
113 GLA MAN ABE 0.484848 0.916667
114 NDG GAL 0.483333 0.733333
115 GAL NDG 0.483333 0.733333
116 NLC 0.483333 0.733333
117 NOJ GLC 0.482759 0.727273
118 AMG 0.478261 0.857143
119 MMA 0.478261 0.857143
120 GYP 0.478261 0.857143
121 MBG 0.478261 0.857143
122 GAL NGA A2G 0.476923 0.673469
123 ABL 0.474576 0.702128
124 MVP 0.474576 0.733333
125 CGC 0.474576 0.941176
126 5QP 0.473684 0.885714
127 FRU GAL 0.473684 0.842105
128 NOY BGC 0.473684 0.75
129 BMA FRU 0.473684 0.842105
130 T6P 0.472727 0.767442
131 GLC GLC GLC GLC GLC GLC 0.46875 1
132 GAL GAL SO4 0.467742 0.702128
133 BMA IFM 0.465517 0.744186
134 MAN MNM 0.465517 0.75
135 IFM BMA 0.465517 0.744186
136 9MR 0.465517 0.744186
137 BGC OXZ 0.465517 0.666667
138 IFM BGC 0.465517 0.744186
139 FUC BGC GAL 0.460317 0.970588
140 G2F BGC BGC BGC BGC BGC 0.460317 0.868421
141 GLA GAL BGC 5VQ 0.459016 0.891892
142 GLC DMJ 0.457627 0.727273
143 MAN DGO 0.448276 0.914286
144 BMA BMA GLA BMA BMA 0.447761 1
145 2GS 0.446809 0.857143
146 GLC GLC XYP 0.446154 1
147 P3M 0.446154 0.767442
148 GAL BGC BGC XYS 0.442857 0.942857
149 GLA GAL NAG 0.441176 0.733333
150 NAG GAL GAL 0.441176 0.733333
151 MAN BMA NAG 0.441176 0.733333
152 MAN MAN MAN MAN 0.439394 1
153 SOR GLC GLC 0.439394 0.970588
154 MAN MAN BMA MAN 0.439394 1
155 MAN 7D1 0.438596 0.888889
156 NAG BMA 0.4375 0.653061
157 GLC GLC GLC GLC 0.4375 1
158 GLA GAL GLC NBU 0.4375 0.846154
159 MAN MAN MAN BMA MAN 0.43662 1
160 8VZ 0.435484 0.673469
161 GAL MGC 0.435484 0.702128
162 GLC GLC GLC BGC 0.432836 1
163 MAN BMA MAN MAN MAN 0.432836 1
164 M5S 0.432836 1
165 MAN 0.431818 0.848485
166 GAL 0.431818 0.848485
167 BMA 0.431818 0.848485
168 ALL 0.431818 0.848485
169 WOO 0.431818 0.848485
170 GXL 0.431818 0.848485
171 GLC 0.431818 0.848485
172 GLA 0.431818 0.848485
173 BGC 0.431818 0.848485
174 GIV 0.431818 0.848485
175 BGC BGC G2F SHG 0.430556 0.846154
176 MLB 0.428571 1
177 BGC GLA 0.428571 1
178 KHO 0.428571 0.888889
179 GLA BGC 0.428571 1
180 MAN BMA 0.428571 1
181 GAL GAL 0.428571 1
182 LAK 0.428571 1
183 GLA GLC 0.428571 1
184 GLA BMA 0.428571 1
185 BMA GLA 0.428571 1
186 SOR GLC GLC GLC 0.426471 0.970588
187 LAG 0.426471 0.6
188 GAL BGC NAG GAL 0.424658 0.733333
189 OXZ BGC BGC 0.424242 0.6875
190 LAT FUC 0.424242 0.970588
191 BGC GAL FUC 0.424242 0.970588
192 FUC GAL GLC 0.424242 0.970588
193 UMQ 0.424242 0.785714
194 GLC GAL FUC 0.424242 0.970588
195 G3I 0.424242 0.767442
196 DMU 0.424242 0.785714
197 LMU 0.424242 0.785714
198 FUC LAT 0.424242 0.970588
199 LMT 0.424242 0.785714
200 G2I 0.424242 0.767442
201 BTU 0.423729 0.842105
202 TUR 0.423729 0.842105
203 LAT NAG GAL 0.418919 0.733333
204 BGC GAL NAG GAL 0.418919 0.733333
205 GAL NAG GAL BGC 0.418919 0.733333
206 BGC GLA GAL FUC 0.416667 0.970588
207 ISX 0.416667 0.761905
208 MAN MMA MAN 0.415385 0.942857
209 NPJ 0.414286 0.622642
210 GLC GLC GLC 0.413793 1
211 MAN MAN MAN 0.413793 1
212 GLC GLC GLC GLC GLC BGC 0.413793 1
213 GLC GLC GLC GLC BGC 0.413793 1
214 NAG GAL GAL NAG GAL 0.413333 0.6875
215 GLC GLC XYS 0.411765 0.970588
216 G1P 0.411765 0.697674
217 ALX 0.411765 0.697674
218 GL1 0.411765 0.697674
219 BNX 0.411765 0.697674
220 M1P 0.411765 0.697674
221 XGP 0.411765 0.697674
222 56N 0.410714 0.833333
223 MAN IFM 0.409836 0.761905
224 GLC IFM 0.409836 0.761905
225 FUC NDG GAL 0.408451 0.717391
226 OPM MAN MAN 0.408451 0.804878
227 GAL NDG FUC 0.408451 0.717391
228 FUC NAG GAL 0.408451 0.717391
229 GAL NAG FUC 0.408451 0.717391
230 GLC GAL NAG GAL 0.407895 0.733333
231 LSE 0.405797 0.6875
232 6UZ 0.405797 0.846154
233 GLC 7LQ 0.403226 0.885714
234 GAL NGT 0.402985 0.66
235 BMA MVL 0.402985 0.6
236 MVL BMA 0.402985 0.6
237 IDC 0.402985 0.6
238 NGT GAL 0.402985 0.66
239 RCB 0.402778 0.622642
240 GLO GLC GLC 0.402778 0.942857
241 GTM BGC BGC 0.4 0.868421
242 GLC GLC BGC XYS BGC XYS 0.4 0.942857
243 10M 0.4 0.733333
Ligand no: 2; Ligand: NAG MAN BMA NDG MAN NAG GAL; Similar ligands found: 155
No: Ligand ECFP6 Tc MDL keys Tc
1 NAG MAN BMA NDG MAN NAG GAL 1 1
2 NAG MAN GAL BMA NAG MAN NAG GAL 0.945055 1
3 MAN BMA NAG NAG MAN NAG GAL GAL 0.945055 1
4 NAG MAN GAL BMA NDG MAN NAG GAL 0.945055 1
5 NAG MAN MAN MAN NAG GAL NAG GAL 0.945055 1
6 NAG BMA NAG MAN MAN NAG NAG 0.934783 1
7 NAG NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.85 0.979592
8 M5G 0.83 0.979592
9 NAG MAN GAL MAN MAN NAG GAL 0.744898 0.979592
10 MAN MAN NAG MAN NAG 0.744898 0.979592
11 NAG NAG BMA MAN MAN 0.744898 0.979592
12 NAG NAG BMA MAN MAN NAG NAG 0.728972 0.924528
13 BMA NAG MAN MAN MAN MAN MAN MAN MAN 0.722772 0.918367
14 NAG GAL GAL NAG 0.680851 0.979592
15 GAL NAG GAL NAG GAL NAG 0.680851 1
16 NAG MAN MAN MAN NAG 0.663265 0.979592
17 ASN NAG NAG BMA MAN MAN NAG NAG 0.65812 0.907407
18 NAG BMA MAN MAN MAN MAN 0.65 0.918367
19 NAG GAL NAG 0.648936 0.979592
20 NAG NAG BMA MAN MAN MAN MAN 0.640351 0.90566
21 NAG NAG BMA MAN NAG 0.633027 0.924528
22 NAG NAG NAG NAG 0.608696 1
23 NAG NAG NAG NDG 0.608696 1
24 NAG NAG NAG NAG NAG NAG NAG NAG 0.608696 1
25 NAG NAG NAG NAG NAG NAG 0.608696 1
26 NAG NAG NAG NAG NAG 0.608696 1
27 NDG NAG NAG NDG 0.608696 1
28 CTO 0.608696 1
29 NDG NAG NAG 0.608696 1
30 NDG NAG NAG NDG NAG 0.608696 1
31 NDG NAG NAG NAG 0.608696 1
32 NAG NAG NDG 0.608696 1
33 NAG NAG NAG 0.608696 1
34 NAG NAG NAG NAG NDG NAG 0.608696 1
35 NAG NAG NAG NAG NDG 0.608696 1
36 NAG MAN MAN 0.608247 0.918367
37 NAG MAN BMA 0.608247 0.918367
38 WZ5 0.603774 0.92
39 NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.598214 0.849057
40 MAN BMA NAG 0.595745 0.918367
41 NAG GAL GAL 0.595745 0.918367
42 GLA GAL NAG 0.595745 0.918367
43 GLC GAL NAG GAL 0.59 0.918367
44 NAG NDG 0.565217 0.979592
45 NAG GDL 0.565217 0.979592
46 CBS CBS 0.565217 0.979592
47 CBS 0.565217 0.979592
48 NAG GAL GAL NAG GAL 0.564356 0.979592
49 NGA GLA GAL BGC 0.553398 0.918367
50 MAN NAG GAL 0.55102 0.918367
51 GAL NAG MAN 0.55102 0.918367
52 NAG GAL BGC 0.55 0.918367
53 GAL NDG 0.549451 0.918367
54 NDG GAL 0.549451 0.918367
55 NLC 0.549451 0.918367
56 MMA MAN NAG MAN NAG NAG 0.542056 0.98
57 WZ4 0.533333 0.867925
58 A2G GAL NAG FUC 0.53211 1
59 NAG MAN MMA 0.53 0.92
60 GAL BGC NAG GAL 0.529412 0.918367
61 NAG NAG NAG NAG NAG NAG NAG 0.523364 0.907407
62 FUC GAL NDG 0.514852 0.938776
63 DR2 0.514852 0.938776
64 NDG GAL FUC 0.514852 0.938776
65 FUL GAL NAG 0.514852 0.938776
66 FUC GAL NAG 0.514852 0.938776
67 FUC BGC GAL NAG GAL 0.513274 0.938776
68 NAG NAG BMA MAN 0.509091 0.90566
69 MAN MAN MAN BMA MAN MAN MAN 0.504587 0.68
70 CTO TMX 0.5 0.844828
71 TCG 0.5 0.844828
72 MAN MAN MAN BMA MAN 0.495146 0.673469
73 NGA GAL BGC 0.49505 0.918367
74 FUC GAL NAG GAL BGC 0.491228 0.938776
75 GLC GAL NAG GAL FUC A2G 0.487603 1
76 A2G GAL NAG FUC GAL GLC 0.487603 1
77 1GN ACY GAL ACY 1GN BGC GAL BGC 0.486726 0.979592
78 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.486726 0.979592
79 GAL NAG GAL 0.485714 0.882353
80 G6S NAG 0.485437 0.714286
81 BGC GAL NAG GAL 0.481132 0.918367
82 GAL NAG GAL BGC 0.481132 0.918367
83 LAT NAG GAL 0.481132 0.918367
84 GAL NGA GLA BGC GAL 0.477064 0.918367
85 MAN MAN NAG 0.47619 0.882353
86 BGC GAL NAG GAL FUC FUC 0.474576 0.959184
87 GLC GAL NAG GAL FUC FUC 0.474576 0.959184
88 AML MAN MAN MAN MAN MAN MAN MAN MAN 0.473684 0.618182
89 NAG NAG BMA 0.46729 0.90566
90 NAG NDG BMA 0.46729 0.90566
91 FUC BGC GAL NAG 0.460177 0.938776
92 A2G GAL BGC FUC 0.452174 0.938776
93 MAN NAG 0.44898 0.918367
94 FUC GAL NAG A2G 0.448276 0.907407
95 GLA GAL NAG FUC GAL GLC 0.446281 0.938776
96 NDG NAG 0.445545 1
97 NAG BMA MAN MAN MAN MAN MAN 0.445455 0.673077
98 NAG FUC 0.444444 0.897959
99 3PV 0.443478 0.867925
100 A2G MBG 0.435644 0.92
101 SN5 SN5 0.435644 0.811321
102 MBG A2G 0.435644 0.92
103 SIA GAL NAG GAL BGC 0.434783 0.924528
104 BGC GAL NAG SIA GAL 0.434783 0.924528
105 SIA GAL NAG GAL GLC 0.434783 0.924528
106 NAG NAG NGT 0.433628 0.830508
107 NAG GAL 0.43 0.918367
108 NGA GAL 0.43 0.918367
109 GAL NAG 0.43 0.918367
110 NAG A2G 0.425743 0.979592
111 NAG NGA 0.425743 0.979592
112 NAG MBG 0.425743 0.92
113 GAL NGA A2G 0.423077 0.96
114 NAG AMU NAG AMV 0.422414 0.960784
115 MAN MAN MAN GLC 0.421569 0.673469
116 NAG GAL FUC FUC A2G 0.420168 1
117 FUC GAL NAG A2G FUC 0.420168 1
118 NOJ NAG NAG 0.419643 0.872727
119 NOJ NAG NAG NAG 0.419643 0.890909
120 NAG GCU NAG GCD 0.417323 0.907407
121 UNU GAL NAG 0.415929 0.96
122 KDO MAN MAN MAN MAN MAN 0.415385 0.673077
123 NAG MUB 0.414414 0.98
124 NAG AMU 0.414414 0.98
125 NDG BDP BDP NPO NDG 0.414062 0.765625
126 A2G GAL FUC 0.412844 0.938776
127 FUC GLA A2G 0.412844 0.938776
128 FUC GL0 A2G 0.412844 0.938776
129 A2G GLA FUC 0.412844 0.938776
130 FUC GAL A2G 0.412844 0.938776
131 NGA GAL FUC 0.412844 0.938776
132 DLD 0.410714 0.813559
133 8VZ 0.41 0.96
134 NAG NAG BMA BMA 0.408696 0.907407
135 6Y2 0.408696 0.765625
136 NAG NGO 0.407407 0.87037
137 BMA NGT MAN MAN 0.40678 0.677966
138 GLC FUC GAL FUC A2G 0.40678 0.959184
139 BGC FUC GAL FUC A2G 0.40678 0.959184
140 BDZ 0.405405 0.959184
141 GAL NDG FUC FUC 0.405405 0.959184
142 FUC NAG GAL FUC 0.405405 0.959184
143 BCW 0.405405 0.959184
144 FUC NDG GAL FUC 0.405405 0.959184
145 FUC GAL NDG FUC 0.405405 0.959184
146 GAL NAG FUC FUC 0.405405 0.959184
147 FUC GAL NAG FUC 0.405405 0.959184
148 MAN MAN MAN MAN 0.4 0.673469
149 NAG GAL FUC 0.4 0.938776
150 GLA GAL GAL 0.4 0.673469
151 DR3 0.4 0.938776
152 MAN MAN BMA MAN 0.4 0.673469
153 BMA MAN MAN 0.4 0.673469
154 GLA GAL BGC 0.4 0.673469
155 AO3 0.4 0.753846
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2AR6; Ligand: NAG MAN; Similar sites found: 50
This union binding pocket(no: 1) in the query (biounit: 2ar6.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1TDF FAD 0.03355 0.40865 1.19048
2 5OFW 9TW 0.01038 0.41528 1.34529
3 1WHT BZS 0.02066 0.40004 1.96078
4 1V59 FAD 0.005185 0.44907 2.77778
5 1U1J MET 0.007634 0.4102 2.77778
6 1DQS NAD 0.02868 0.40716 2.77778
7 1FL2 FAD 0.008756 0.43204 3.1746
8 1I9G SAM 0.006903 0.41497 3.1746
9 5TQZ GLC 0.000002359 0.60631 3.33333
10 1MO9 FAD 0.00418 0.47403 3.96825
11 1MO9 KPC 0.004784 0.47145 3.96825
12 2B9W FAD 0.02106 0.42488 3.96825
13 3LLZ GAL NGA 0.004616 0.42195 4.51128
14 1GET FAD 0.004225 0.46723 4.7619
15 1GET NAP 0.004467 0.46723 4.7619
16 1PS9 FAD 0.02132 0.41455 4.7619
17 4H4D 10E 0.006253 0.41117 4.7619
18 3BY8 MLT 0.0161 0.40493 4.92958
19 5TE1 7A2 0.00295 0.436 5.15873
20 1TUU ADP 0.003963 0.43497 5.55556
21 1TUU AMP 0.003627 0.43164 5.55556
22 3RIY NAD 0.01789 0.40693 6.34921
23 4UP3 FAD 0.0349 0.40286 6.34921
24 2XVF FAD 0.03152 0.40233 6.34921
25 2GUC MAN 0.0000002342 0.63808 6.55738
26 2NU5 NAG 0.0000003087 0.63069 6.55738
27 2GUD MAN 0.0000003112 0.62669 6.55738
28 2HYR BGC GLC 0.0000004692 0.61368 6.55738
29 2NUO BGC 0.000002712 0.56459 6.55738
30 2GUD BMA 0.000003461 0.55706 6.55738
31 2GUE NAG 0.00001053 0.47898 6.55738
32 2HYQ MAN MAN 0.000008691 0.4235 6.55738
33 4QB6 GCU XYP 0.01882 0.40849 6.70732
34 2XVE FAD 0.04654 0.40935 6.74603
35 3VY6 BGC BGC 0.000002152 0.5665 7.0922
36 3LAD FAD 0.005301 0.44584 7.53968
37 3F8D FAD 0.01685 0.43795 7.93651
38 3AD8 NAD 0.02966 0.40066 7.93651
39 2GVC FAD 0.0249 0.40335 9.52381
40 4LNU GTP 0.007391 0.42145 11.1111
41 5EYP GTP 0.008537 0.41846 11.1111
42 2VVM FAD 0.01638 0.4194 11.5079
43 1N4W FAD 0.03817 0.40341 11.9048
44 4AKB GAL 0.009056 0.42531 12.782
45 5FS0 5JC 0.0144 0.40246 12.7962
46 4GYW UDP 0.02351 0.40348 13.8889
47 4FWE FAD 0.03782 0.40361 14.6825
48 2DUR MAN MAN 0.0000008081 0.65144 19.8413
49 4ZNO SUC 0.00002726 0.53916 21.0317
50 2F5Z FAD 0.01828 0.41967 25
Pocket No.: 2; Query (leader) PDB : 2AR6; Ligand: NAG MAN MAN MAN NAG; Similar sites found: 37
This union binding pocket(no: 2) in the query (biounit: 2ar6.bio1) has 21 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5N53 8NB 0.01992 0.40721 None
2 5FQ0 FLC 0.02475 0.40219 None
3 1TDF NAP 0.04972 0.40449 1.19048
4 1TDF FAD 0.02684 0.40449 1.19048
5 1YKJ FAD 0.04987 0.40061 1.98413
6 1U1J MET 0.01174 0.40371 2.77778
7 1FL2 FAD 0.00797 0.42335 3.1746
8 5TQZ GLC 0.000002622 0.61433 3.33333
9 1MO9 FAD 0.005769 0.45543 3.96825
10 1MO9 KPC 0.006504 0.45334 3.96825
11 2B9W FAD 0.02497 0.4118 3.96825
12 3LLZ GAL NGA 0.005737 0.42892 4.51128
13 1GET NAP 0.007467 0.44467 4.7619
14 1GET FAD 0.007052 0.44467 4.7619
15 4H4D 10E 0.009653 0.40461 4.7619
16 1PS9 FAD 0.02262 0.40389 4.7619
17 3QVP FAD 0.02944 0.40015 4.7619
18 5TE1 7A2 0.006215 0.42649 5.15873
19 1TUU ADP 0.009252 0.42263 5.55556
20 1TUU AMP 0.008247 0.42039 5.55556
21 3LL2 MAN MAN MAN MAN MAN MAN MAN MAN 0.0004834 0.42901 6.50407
22 2GUC MAN 0.00000025 0.64881 6.55738
23 2NU5 NAG 0.0000003455 0.63948 6.55738
24 2GUD MAN 0.0000003369 0.63645 6.55738
25 2HYR BGC GLC 0.000000494 0.62428 6.55738
26 2NUO BGC 0.000002457 0.56948 6.55738
27 2GUD BMA 0.000004076 0.56234 6.55738
28 2GUE NAG 0.00001006 0.48406 6.55738
29 2HYQ MAN MAN 0.0000006041 0.40776 6.55738
30 4QB6 GCU XYP 0.02469 0.40281 6.70732
31 3VY6 BGC BGC 0.000002385 0.57072 7.0922
32 3F8D FAD 0.02093 0.42348 7.93651
33 5EYP GTP 0.009884 0.40498 11.1111
34 2VVM FAD 0.02047 0.40505 11.5079
35 4AKB GAL 0.009499 0.43022 12.782
36 2DUR MAN MAN 0.000001248 0.6498 19.8413
37 4ZNO SUC 0.00002744 0.54533 21.0317
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