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Receptor
PDB id Resolution Class Description Source Keywords
2BD0 1.7 Å EC: 1.1.1.153 CHLOROBIUM TEPIDUM SEPIAPTERIN REDUCTASE COMPLEXED WITH NADP SEPIAPTERIN CHLOROBIUM TEPIDUM SEPIAPTERIN REDUCTASE CHLOROBIUM TEPIDUM OXIDOREDUCTASE
Ref.: STRUCTURE OF CHLOROBIUM TEPIDUM SEPIAPTERIN REDUCTA COMPLEX REVEALS THE NOVEL SUBSTRATE BINDING MODE FO STEREOSPECIFIC PRODUCTION OF L-THREO-TETRAHYDROBIOP J.BIOL.CHEM. V. 281 2249 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BIO D:900;
Valid;
none;
submit data
237.215 C9 H11 N5 O3 C[C@H...
NAP A:800;
B:1800;
C:2800;
D:3800;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2BD0 1.7 Å EC: 1.1.1.153 CHLOROBIUM TEPIDUM SEPIAPTERIN REDUCTASE COMPLEXED WITH NADP SEPIAPTERIN CHLOROBIUM TEPIDUM SEPIAPTERIN REDUCTASE CHLOROBIUM TEPIDUM OXIDOREDUCTASE
Ref.: STRUCTURE OF CHLOROBIUM TEPIDUM SEPIAPTERIN REDUCTA COMPLEX REVEALS THE NOVEL SUBSTRATE BINDING MODE FO STEREOSPECIFIC PRODUCTION OF L-THREO-TETRAHYDROBIOP J.BIOL.CHEM. V. 281 2249 2006
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 2BD0 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 2BD0 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 2BD0 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BIO; Similar ligands found: 9
No: Ligand ECFP6 Tc MDL keys Tc
1 BIO 1 1
2 NEO 0.701754 0.830508
3 NEU 0.701754 0.830508
4 MPU 0.701754 0.830508
5 HHR 0.483333 0.818182
6 HHS 0.47541 0.884615
7 PMM 0.432836 0.707692
8 HH2 0.408451 0.686567
9 PE0 0.403509 0.82
Ligand no: 2; Ligand: NAP; Similar ligands found: 123
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NHD 0.68254 0.958904
10 NJP 0.661417 0.972973
11 NFD 0.658915 0.934211
12 NXX 0.619048 0.959459
13 DND 0.619048 0.959459
14 AMP NAD 0.606061 0.958904
15 ZID 0.605839 0.972603
16 NAQ 0.59854 0.922078
17 ATR 0.59292 0.917808
18 NAE 0.591241 0.946667
19 NDE 0.58042 0.986301
20 A22 0.571429 0.958904
21 NAJ 0.567164 0.986111
22 A2R 0.563025 0.932432
23 NDC 0.561644 0.922078
24 NA7 0.552846 0.907895
25 ODP 0.551471 0.935065
26 A2P 0.539823 0.930556
27 8ID 0.537313 0.910256
28 NPW 0.525547 0.8875
29 NZQ 0.521739 0.910256
30 CNA 0.521739 0.959459
31 NDP 0.514493 0.922078
32 PO4 PO4 A A A A PO4 0.503937 0.930556
33 1DG 0.503401 0.922078
34 DG1 0.503401 0.922078
35 TXP 0.5 0.922078
36 NMN AMP PO4 0.492958 0.921053
37 XNP 0.492958 0.875
38 25L 0.492308 0.958904
39 25A 0.492063 0.972222
40 NMN 0.486726 0.888889
41 NGD 0.485714 0.935065
42 9JJ 0.481707 0.8875
43 2AM 0.477876 0.891892
44 ADP 0.458333 0.945205
45 PAP 0.451613 0.931507
46 A2D 0.445378 0.945205
47 AN2 0.442623 0.932432
48 7L1 0.441558 0.777778
49 ADP PO3 0.44 0.944444
50 SAP 0.44 0.896104
51 AGS 0.44 0.896104
52 M33 0.439024 0.906667
53 AR6 AR6 0.438849 0.945205
54 BA3 0.438017 0.945205
55 OAD 0.43609 0.92
56 ADP BMA 0.43609 0.92
57 DQV 0.435714 0.958904
58 HEJ 0.435484 0.945205
59 ATP 0.435484 0.945205
60 OOB 0.435115 0.958904
61 B4P 0.434426 0.945205
62 AP5 0.434426 0.945205
63 GAP 0.433071 0.92
64 0WD 0.432432 0.922078
65 2A5 0.432 0.87013
66 5FA 0.432 0.945205
67 AQP 0.432 0.945205
68 AT4 0.430894 0.907895
69 00A 0.428571 0.909091
70 DAL AMP 0.427481 0.932432
71 CA0 0.427419 0.92
72 ADP ALF 0.426357 0.871795
73 ALF ADP 0.426357 0.871795
74 9X8 0.425373 0.871795
75 ACP 0.424 0.92
76 NAJ PZO 0.423841 0.897436
77 9SN 0.423358 0.897436
78 ADP VO4 0.423077 0.932432
79 VO4 ADP 0.423077 0.932432
80 WAQ 0.422222 0.884615
81 V3L 0.421875 0.945205
82 ACQ 0.421875 0.92
83 ADQ 0.421053 0.92
84 AR6 0.420635 0.918919
85 APR 0.420635 0.918919
86 ATP A A A 0.42029 0.958333
87 CO7 0.419753 0.786517
88 3OD 0.419118 0.92
89 1ZZ 0.419118 0.841463
90 DLL 0.41791 0.958904
91 AD9 0.417323 0.92
92 NAX 0.416667 0.875
93 OVE 0.416667 0.857143
94 MYR AMP 0.416058 0.841463
95 AV2 0.415385 0.868421
96 A3P 0.414634 0.944444
97 NNR 0.414414 0.72973
98 OMR 0.413793 0.831325
99 6YZ 0.412214 0.92
100 ANP 0.410853 0.92
101 A1R 0.410448 0.860759
102 ABM 0.409836 0.893333
103 A 0.408333 0.944444
104 AMP 0.408333 0.944444
105 SON 0.408 0.933333
106 PPS 0.407692 0.829268
107 5AL 0.407692 0.932432
108 NAI 0.406897 0.909091
109 7D3 0.406504 0.857143
110 ADX 0.404762 0.829268
111 ATF 0.40458 0.907895
112 3UK 0.404412 0.945946
113 TYR AMP 0.404255 0.921053
114 AMP DBH 0.404255 0.894737
115 139 0.402685 0.875
116 50T 0.401575 0.906667
117 SRP 0.401515 0.907895
118 A A 0.40146 0.972222
119 B5V 0.40146 0.933333
120 A3R 0.4 0.860759
121 3AM 0.4 0.90411
122 B5M 0.4 0.921053
123 FA5 0.4 0.933333
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2BD0; Ligand: NAP; Similar sites found with APoc: 994
This union binding pocket(no: 1) in the query (biounit: 2bd0.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 2HK9 ATR None
2 4XB2 NDP None
3 3MQ2 SAH None
4 2HK9 NAP None
5 5EZU MYR None
6 3DUW SAH None
7 4DVE BTN None
8 4XB2 HSE None
9 3RHC GSH None
10 1BWO LPC None
11 1WUW TSU None
12 3EW2 BTN None
13 1RKX NAD 0.819672
14 2PX8 SAH 0.819672
15 1HDR NAD 1.22951
16 4E13 NAD 1.22951
17 5BSZ SAH 1.22951
18 3EVG SAH 1.22951
19 2P41 SAH 1.22951
20 3LKZ SFG 1.22951
21 1IM8 SAI 1.22951
22 5WQP NAP 1.28205
23 5WQP NCA 1.28205
24 1WY7 SAH 1.44928
25 4POO SAM 1.5
26 2GN4 NDP 1.63934
27 2GN4 UD1 1.63934
28 5OCQ CIT 1.63934
29 5JAQ NAI 1.63934
30 5T9E NAP 1.63934
31 2WPB ZZI 1.63934
32 1EZ4 NAD 1.63934
33 5YJF 8WO 1.63934
34 5T9F TYR 1.63934
35 5T9F NAP 1.63934
36 5YJF SAH 1.63934
37 5X20 NAD 1.63934
38 1TZD ADP 1.63934
39 4CJX NAP 1.63934
40 1SC6 NAD 1.63934
41 1KC7 PPR 1.63934
42 1LUA NAP 1.63934
43 3C3Y SAH 1.68776
44 2PXX SAH 1.86047
45 4R1S NAP 2.04918
46 2WYV NAD 2.04918
47 3ORF NAD 2.04918
48 5E9W SAH 2.04918
49 5MPT SAH 2.04918
50 1GV0 NAD 2.04918
51 1SQF SAM 2.04918
52 5DNK SAH 2.04918
53 5THY SAH 2.04918
54 1E5Q NDP 2.04918
55 5ZI2 NAD 2.04918
56 5E70 RCD 2.04918
57 5ZI2 ADP 2.04918
58 5THZ SAH 2.04918
59 3H9E NAD 2.04918
60 1H2B NAJ 2.04918
61 3OA2 NAD 2.04918
62 2NVK NAP 2.04918
63 5AYV NAP 2.04918
64 2WA2 SAM 2.04918
65 4X9M FAD 2.04918
66 2CVQ NDP 2.04918
67 4UP3 NDP 2.04918
68 5GWX SAM 2.04918
69 5GWX SAR 2.04918
70 2VVM FAD 2.04918
71 2VVL FAD 2.04918
72 1KOL NAD 2.04918
73 3KB6 NAD 2.04918
74 1X14 NAD 2.04918
75 3TWO NDP 2.04918
76 1YB5 NAP 2.04918
77 2ATJ BHO 2.04918
78 5KZD RCJ 2.04918
79 2F7A BEZ 2.15517
80 6DUB SAH 2.25225
81 3LU1 NAD 2.45902
82 4Q9N NAI 2.45902
83 5L4L NAP 2.45902
84 3JWH SAH 2.45902
85 5W7K SAH 2.45902
86 1G55 SAH 2.45902
87 5W7M SAH 2.45902
88 4KIB SAH 2.45902
89 1ZGA SAH 2.45902
90 5L4L 7OX 2.45902
91 1WP4 NDP 2.45902
92 1RJD SAM 2.45902
93 5LD5 NAD 2.45902
94 2CVZ NDP 2.45902
95 4UCI SAM 2.45902
96 6A0S NDP 2.45902
97 6A0S HSE 2.45902
98 1Y8Q ATP 2.45902
99 2IXB A2G 2.45902
100 2JHF NAD 2.45902
101 2IXB NAD 2.45902
102 5O96 SAM 2.45902
103 5ZI9 FLC 2.45902
104 3AXB PRO 2.45902
105 3AXB FAD 2.45902
106 3FPF TNA 2.45902
107 3FPF MTA 2.45902
108 5EIN NAP 2.45902
109 2Z3Y F2N 2.45902
110 3OND ADN 2.45902
111 3OND NAD 2.45902
112 5CUQ NSC 2.45902
113 4M73 SAH 2.45902
114 4M73 M72 2.45902
115 1V8B NAD 2.45902
116 4XYB NDP 2.45902
117 1N2X SAM 2.45902
118 3LZW FAD 2.45902
119 3LZW NAP 2.45902
120 2GZ3 NAP 2.45902
121 5X68 FAD 2.45902
122 5HTX ADP 2.45902
123 1P1C SAH 2.51256
124 1JG3 ADN 2.55319
125 3ENV ABF 2.55319
126 1VE3 SAM 2.64317
127 1P19 IMP 2.71493
128 2OBF F83 2.76817
129 2OBF SAH 2.76817
130 3OFK SAH 2.77778
131 4MOP 2H5 2.8436
132 1E7S NAP 2.86885
133 5K4W NAI 2.86885
134 3GU3 SAH 2.86885
135 5K4W THR 2.86885
136 1D7O TCL 2.86885
137 1D7O NAD 2.86885
138 3H8V ATP 2.86885
139 5YEC ATP 2.86885
140 2F1K NAP 2.86885
141 5L95 AMP 2.86885
142 1LTH NAD 2.86885
143 5F8F SFG 2.86885
144 2JJQ SAH 2.86885
145 4ZGS NAD 2.86885
146 5JGL SAM 2.86885
147 2PWY SAH 2.86885
148 5U5G NAP 2.86885
149 4DPL NAP 2.86885
150 4R5M NAP 2.86885
151 4PNE SAH 2.86885
152 4DMG SAM 2.86885
153 1LDM NAD 2.86885
154 1J5P NAD 2.86885
155 6C4N NAP 2.86885
156 3TKY SAH 2.86885
157 5EES NAP 2.86885
158 5W7R SAH 2.86885
159 5Z21 NAI 2.86885
160 4R5M 4NO 2.86885
161 3WGT FAD 2.86885
162 4OBW SAM 2.86885
163 3NYC FAD 2.86885
164 3NYC IAR 2.86885
165 4L8V NAP 2.86885
166 5X9D 80F 2.86885
167 1COY FAD 2.86885
168 2FZW NAD 2.86885
169 5L3W GDP 2.86885
170 2WPF WPF 2.86885
171 2WPF FAD 2.86885
172 4DSG UDP 2.86885
173 4DSG FAD 2.86885
174 5CIC 51R 2.86885
175 1X7D NAD 2.86885
176 4KOA NDP 2.86885
177 3WGT QSC 2.86885
178 6ER9 NAP 2.86885
179 6ER9 FAD 2.86885
180 3SHR CMP 2.86885
181 3C8F MT2 2.86885
182 3WSG CIT 2.86885
183 3UOY NAP 2.86885
184 3UOY FAD 2.86885
185 1YQZ FAD 2.86885
186 4YMH SAH 2.91667
187 2DC1 NAD 2.9661
188 2DBZ NAP 2.99401
189 6FMC DUE 3.16456
190 1XDS SAM 3.20856
191 3OU2 SAH 3.21101
192 4O1M NAD 3.27869
193 6DNT NAD 3.27869
194 4GLL NAD 3.27869
195 5OJL TXP 3.27869
196 1SB8 NAD 3.27869
197 6GKV SAH 3.27869
198 1SB8 UD2 3.27869
199 6FDF SAH 3.27869
200 5H81 NAP 3.27869
201 1UWK URO 3.27869
202 1UWK NAD 3.27869
203 1FP2 SAH 3.27869
204 2IZ1 ATR 3.27869
205 6ECT SAM 3.27869
206 3V1Y NAD 3.27869
207 4GKV NAD 3.27869
208 4M37 SAH 3.27869
209 3G2O SAM 3.27869
210 1QAN SAH 3.27869
211 2YVJ NAI 3.27869
212 1I9G SAM 3.27869
213 1LVL NAD 3.27869
214 1JG0 UMP 3.27869
215 3C1O NAP 3.27869
216 3LST SAH 3.27869
217 5UAV NDP 3.27869
218 1J0X NAD 3.27869
219 4BG4 ARG 3.27869
220 1P0F NAP 3.27869
221 4Z0H NAD 3.27869
222 1DSS NAD 3.27869
223 3GWZ SAH 3.27869
224 1H82 FAD 3.27869
225 1NVM NAD 3.27869
226 1H82 GZZ 3.27869
227 2NAD NAD 3.27869
228 5OKU 0L1 3.27869
229 1XTP SAI 3.27869
230 3L9W AMP 3.27869
231 1HYH NAD 3.27869
232 6C5B SAH 3.27869
233 3L4S NAD 3.27869
234 1YY5 FAD 3.27869
235 2YAB AMP 3.27869
236 1GPJ CIT 3.27869
237 2B1N LYS ALA SER VAL GLY 3.27869
238 2IV3 UDP 3.27869
239 3ZNN 4WL 3.27869
240 3ZNN FAD 3.27869
241 1O0S NAI 3.27869
242 3GXO SAH 3.27869
243 2B4R AES 3.27869
244 1GPM CIT 3.27869
245 2RAB NAD 3.27869
246 2GCG NDP 3.27869
247 1GTE FAD 3.27869
248 2B4R NAD 3.27869
249 3QJ4 FAD 3.27869
250 1GR0 NAD 3.27869
251 6BQ6 TER 3.27869
252 5UAV TFB 3.27869
253 2Y6Q I7T 3.27869
254 2Y6Q FAD 3.27869
255 3L4S 3PG 3.27869
256 5FJN FAD 3.27869
257 5FJN BE2 3.27869
258 2BKA NDP 3.30579
259 5E1M SAH 3.3195
260 4LZB URA 3.36134
261 5NC1 NAG 3.37553
262 1TL2 NDG 3.38983
263 4XFR CIT 3.51288
264 2XVM SAH 3.51759
265 1APZ ASP 3.5461
266 3CIF NAD 3.62117
267 3CIF G3H 3.62117
268 3GQK ATP 3.68098
269 3OJF NDP 3.68852
270 5F5N NAD 3.68852
271 3OJF IMJ 3.68852
272 2PK3 A2R 3.68852
273 5WP4 SAH 3.68852
274 3G89 SAM 3.68852
275 5WP5 SAH 3.68852
276 1X87 NAD 3.68852
277 4OHU 2TK 3.68852
278 4OHU NAD 3.68852
279 4DCM SAM 3.68852
280 1FP1 SAH 3.68852
281 5A1S FLC 3.68852
282 4ONQ SFG 3.68852
283 1H9A NAP 3.68852
284 3A4T SFG 3.68852
285 1ZH8 NAP 3.68852
286 2ZWA SAH 3.68852
287 5ULP KB1 3.68852
288 5CAE COA 3.68852
289 3VSE SAH 3.68852
290 2EJU SAH 3.68852
291 3SUC ATP 3.68852
292 2FB3 MET 3.68852
293 2JK0 ASP 3.68852
294 2VHW NAI 3.68852
295 1F8F NAD 3.68852
296 5NA1 FAD 3.68852
297 5OC1 FAD 3.68852
298 2CUN 3PG 3.68852
299 1Z82 NDP 3.68852
300 5VN0 FAD 3.68852
301 1PZG A3D 3.68852
302 1RM4 NDP 3.68852
303 6AC9 ANP 3.68852
304 2R4J 13P 3.68852
305 2R4J FAD 3.68852
306 2GK6 ADP 3.68852
307 2QZZ NAP 3.68852
308 2QZZ EMF 3.68852
309 5CDH TLA 3.68852
310 2E2P ADP 3.68852
311 6GNF GLC 3.68852
312 5DOZ NDP 3.68852
313 3E1T FAD 3.68852
314 1OMO NAD 3.68852
315 5DM1 5D7 3.68852
316 3S1S SAH 3.68852
317 2HQM FAD 3.68852
318 3RGG AIR 3.77358
319 4JLS 3ZE 3.94737
320 1TE2 PGA 3.9823
321 1ORR NAD 4.09836
322 1V6A TRE 4.09836
323 5IN4 6CK 4.09836
324 5IN4 GDP 4.09836
325 1GY8 NAD 4.09836
326 5IN4 NAP 4.09836
327 1VL0 NAI 4.09836
328 2JL1 NAP 4.09836
329 1RPN NDP 4.09836
330 3O7W SAM 4.09836
331 4D79 ATP 4.09836
332 3LCC SAH 4.09836
333 2EXX NAP 4.09836
334 4G5H NAP 4.09836
335 4RDH AMP 4.09836
336 4G5H UD7 4.09836
337 1LDN NAD 4.09836
338 5KKA 6V0 4.09836
339 6BII NAP 4.09836
340 5AOV NAP 4.09836
341 4C4A SAH 4.09836
342 4RDI ATP 4.09836
343 4OM8 NAD 4.09836
344 4RQU NAD 4.09836
345 2Q28 ADP 4.09836
346 1EBF NAD 4.09836
347 1U3U BNF 4.09836
348 1U3U NAD 4.09836
349 2EG5 SAH 4.09836
350 3LCV SAM 4.09836
351 3TLJ SAH 4.09836
352 3HQP OXL 4.09836
353 1Q0H NDP 4.09836
354 2Q0L NAP 4.09836
355 3PLS ANP 4.09836
356 1NJR XYL 4.09836
357 4AP3 FAD 4.09836
358 4AP3 NAP 4.09836
359 6AA8 NAD 4.09836
360 1Q0H FOM 4.09836
361 2NU8 COA 4.09836
362 2J5V RGP 4.09836
363 5GSN NAP 4.09836
364 5GSN FAD 4.09836
365 2HMT NAI 4.16667
366 3BXO SAM 4.1841
367 1XX6 ADP 4.18848
368 5N2I NAP 4.31034
369 2BOS GLA GAL 4.41176
370 2BOS GLA GAL GLC 4.41176
371 5ZW3 SAH 4.44444
372 5OCM NAP 4.46735
373 1FK8 NAD 4.5082
374 4EUE NAI 4.5082
375 5BJX NAD 4.5082
376 5BJX UDP 4.5082
377 1I36 NAP 4.5082
378 4KRI SAH 4.5082
379 1DRV A3D 4.5082
380 2AOT SAH 4.5082
381 1SOW NAD 4.5082
382 1G60 SAM 4.5082
383 1HDG NAD 4.5082
384 2A92 NAI 4.5082
385 1L1E SAH 4.5082
386 1N7G NDP 4.5082
387 1TPY SAH 4.5082
388 1N7G GDR 4.5082
389 4AZW SAM 4.5082
390 3GCZ SAM 4.5082
391 3VC1 SAH 4.5082
392 1J49 NAD 4.5082
393 1P31 EPU 4.5082
394 4J36 1HR 4.5082
395 2PT9 2MH 4.5082
396 4J36 FAD 4.5082
397 3W9F I3P 4.5082
398 1NW5 SAM 4.5082
399 3S5W NAP 4.5082
400 5W3Y ACO 4.5082
401 4FWE FAD 4.5082
402 2PT9 S4M 4.5082
403 2I7C AAT 4.5082
404 5X30 HCS 4.5082
405 3G5S FAD 4.5082
406 3VYW SAM 4.5082
407 2HNK SAH 4.60251
408 5KOK SAH 4.78589
409 5KOK S9T 4.78589
410 4QTU SAM 4.80769
411 1WVG APR 4.91803
412 1Z45 NAD 4.91803
413 5Y1G NAD 4.91803
414 5Y1G AKB 4.91803
415 5DF1 NAP 4.91803
416 5DF1 58X 4.91803
417 4NEC SAH 4.91803
418 4D3F NAP 4.91803
419 4LWP SAH 4.91803
420 1B8U NAD 4.91803
421 3DMH SAM 4.91803
422 4E5N NAD 4.91803
423 3PT9 SAH 4.91803
424 5CWA 0GA 4.91803
425 5YF1 SFG 4.91803
426 3HAD NAD 4.91803
427 3OJO NAD 4.91803
428 5ZYN FAD 4.91803
429 6B5K TYD 4.91803
430 5DXA SFG 4.91803
431 4Y4V DAL 4.91803
432 5MIT FAD 4.91803
433 5MIT NAP 4.91803
434 3DMH GMP 4.91803
435 5DWQ SFG 4.91803
436 5UAO FAD 4.91803
437 5JY6 NAD 4.91803
438 5KVA SAM 4.91803
439 5DN9 NAD 4.91803
440 5DX8 SFG 4.91803
441 5L3V GDP 4.91803
442 1YQD NAP 4.91803
443 4BLW SAH 4.91803
444 1WOG 16D 4.91803
445 2EV9 SKM 4.94297
446 2EV9 NAP 4.94297
447 4IWN GEK 5.24017
448 1Y1P NMN AMP PO4 5.32787
449 3ABI NAD 5.32787
450 6D6Y SAH 5.32787
451 5ERG SAM 5.32787
452 1WDK NAD 5.32787
453 3MB5 SAM 5.32787
454 3T7S SAM 5.32787
455 1HYE NAP 5.32787
456 2VYN NAD 5.32787
457 1I7Q PYR 5.32787
458 1CER NAD 5.32787
459 5WGG SAM 5.32787
460 3A27 SAM 5.32787
461 1KYZ SAH 5.32787
462 5X62 SAH 5.32787
463 1GAD NAD 5.32787
464 5MGZ SAH 5.32787
465 3CMC NAD 5.32787
466 1QZZ SAM 5.32787
467 5O9F 9ON 5.32787
468 5O9F NAD 5.32787
469 4BVA NDP 5.32787
470 5Y8L NAD 5.32787
471 1C0I BE2 5.32787
472 1C0I FAD 5.32787
473 4YCA NDP 5.32787
474 2EB5 OXL 5.32787
475 3BGD SAH 5.32787
476 4B7X NAP 5.32787
477 1TB4 PEJ 5.32787
478 4C3Y FAD 5.32787
479 4C3Y ANB 5.32787
480 3AYI FAD 5.32787
481 3AYI HCI 5.32787
482 3FSY SCA 5.32787
483 5TC4 NAD 5.32787
484 3WLE NAD 5.32787
485 3H2B SAH 5.41872
486 4PLT NAI 5.43807
487 4PLT OXM 5.43807
488 3EWP APR 5.64972
489 2DT5 NAD 5.6872
490 5MSO NAP 5.7377
491 2OOR NAD 5.7377
492 2YX1 SFG 5.7377
493 3GRU AMP 5.7377
494 3QOX SAH 5.7377
495 5KVS NAP 5.7377
496 1F8G NAD 5.7377
497 1KPG SAH 5.7377
498 1CDO NAD 5.7377
499 4XZ3 COA 5.7377
500 1KPH SAH 5.7377
501 5FUB SAH 5.7377
502 5MW4 5JU 5.7377
503 2GSD NAD 5.7377
504 4A6D SAM 5.7377
505 1I8T FAD 5.7377
506 2NXE SAM 5.7377
507 1U1I NAD 5.7377
508 3WQQ IB3 5.7377
509 3WQQ NDP 5.7377
510 1XHC FAD 5.7377
511 4KP7 1UQ 5.7377
512 4KP7 NAP 5.7377
513 2IID FAD 5.7377
514 2IID PHE 5.7377
515 6FP4 FAD 5.7377
516 5N5D SAM 5.75221
517 5ZZ6 ADP 5.76923
518 5ZZ6 NAD 5.76923
519 5XLX SAH 6.02837
520 2BZG SAH 6.03448
521 3CBG SAH 6.03448
522 5M58 SAH 6.08696
523 6EL3 NAP 6.14754
524 2Q1W NAD 6.14754
525 4D42 NAP 6.14754
526 4D42 W0I 6.14754
527 1PL6 NAD 6.14754
528 1PJS NAD 6.14754
529 5MDH NAD 6.14754
530 2PZM NAD 6.14754
531 2PZM UDP 6.14754
532 3H5N ATP 6.14754
533 2XYQ SAH 6.14754
534 3BOF HCS 6.14754
535 1TI7 NAP 6.14754
536 1VKO NAD 6.14754
537 1PL6 572 6.14754
538 5E72 SAM 6.14754
539 4MDH NAD 6.14754
540 1T36 ORN 6.14754
541 5A04 BGC 6.14754
542 5A04 NDP 6.14754
543 2Q7V FAD 6.14754
544 1R18 SAH 6.1674
545 2E0N SAH 6.17761
546 2DTJ THR 6.17978
547 5OOH NAP 6.31068
548 5OOH 9ZZ 6.31068
549 3I53 SAH 6.3253
550 3N8K D1X 6.39535
551 2VT3 ATP 6.51163
552 5NBW 8SK 6.54206
553 4PVD NDP 6.55738
554 5Z75 NAD 6.55738
555 4KRG SAH 6.55738
556 2C29 NAP 6.55738
557 5BW4 SAM 6.55738
558 2C29 DQH 6.55738
559 3GFB NAD 6.55738
560 2JHP SAH 6.55738
561 6C4T NA7 6.55738
562 1ZQ9 SAM 6.55738
563 4OOE FOM 6.55738
564 4OOE NDP 6.55738
565 1T26 GBD 6.55738
566 1T26 NAI 6.55738
567 4RPL FAD 6.55738
568 4RPL 3UC 6.55738
569 1I2B USQ 6.55738
570 1I2B NAD 6.55738
571 1I2B UPG 6.55738
572 1DJN ADP 6.55738
573 4N49 SAM 6.55738
574 5JJR SAH 6.55738
575 2VSU ACO 6.55738
576 3GF4 FAD 6.55738
577 3GF4 UPG 6.55738
578 3HDY GDU 6.55738
579 3HDY FDA 6.55738
580 3A25 SAM 6.55738
581 5YJI SAH 6.55738
582 5YJI 8WO 6.55738
583 3HDY FAD 6.55738
584 3K56 IS3 6.55738
585 1VM6 NAD 6.57895
586 4B4U NAP 6.60066
587 4FZV SAM 6.69456
588 1YS4 NAP 6.96721
589 1GUZ NAD 6.96721
590 5NUF NAD 6.96721
591 6CEP NAD 6.96721
592 2I3G NAP 6.96721
593 4II2 ATP 6.96721
594 6CEP OXM 6.96721
595 2DFV NAD 6.96721
596 3FUU ADN 6.96721
597 5NUE NAD 6.96721
598 4JK3 NAD 6.96721
599 3FRH SAH 6.96721
600 5Z20 NAI 6.96721
601 3E70 GDP 6.96721
602 3T31 DCQ 6.96721
603 3T31 FAD 6.96721
604 4J4H NAI 6.96721
605 4J4H 1J1 6.96721
606 5YSN 5AD 6.96721
607 1DL5 SAH 6.96721
608 2AG8 NAP 6.96721
609 1H6C SIN 6.96721
610 5A6N U7E 6.96721
611 4ZNO SUC 6.96721
612 2XVE FAD 6.96721
613 5J5Z FAD 6.96721
614 1RYD NDP 6.96721
615 1EJ0 SAM 7.22222
616 2A14 SAH 7.37705
617 3GGO ENO 7.37705
618 3GGO NAI 7.37705
619 1OXV ANP 7.37705
620 3O9Z AKG 7.37705
621 4W6Z 8ID 7.37705
622 3O9Z NAD 7.37705
623 4B16 NAG 7.37705
624 2EFJ SAH 7.37705
625 5AWV GHP 3MY 3FG GHP GHP OMY 3FG NAG MAN 7.37705
626 4ZCC NAI 7.37705
627 4ZCC FAD 7.37705
628 2FR1 NDP 7.40741
629 3GFS FMN 7.47126
630 3KIF GDL 7.54717
631 5XNC MTA 7.78689
632 2UYQ SAM 7.78689
633 5UR0 NAD 7.78689
634 3B20 NAD 7.78689
635 3B1J NAD 7.78689
636 2ZIF SAM 7.78689
637 2D2I NAP 7.78689
638 1D1T NAD 7.78689
639 1GQ2 NAP 7.78689
640 3VY6 BGC BGC 7.80142
641 3GDH SAH 7.88382
642 1VI2 NAD 8
643 4GUS FAD 8.06452
644 4GUT FAD 8.06452
645 4HSU FAD 8.06452
646 5FA8 SAM 8.07453
647 1BXK NAD 8.19672
648 4ZRN NAD 8.19672
649 4LHD GLY 8.19672
650 4ZRN UPG 8.19672
651 1BW9 NAD 8.19672
652 1R6D NAD 8.19672
653 1R6D DAU 8.19672
654 1C1X NAD 8.19672
655 5GM1 SAH 8.19672
656 2CDU ADP 8.19672
657 2PV7 NAD 8.19672
658 1MUU NAD 8.19672
659 1BXG NAD 8.19672
660 3NJ4 AFX 8.19672
661 3NJ4 NAD 8.19672
662 1LLU NAD 8.19672
663 5M67 3D1 8.19672
664 1W5F G2P 8.19672
665 2CDU FAD 8.19672
666 5M67 ADE 8.19672
667 5M67 NAD 8.19672
668 1LSS NAD 8.57143
669 1O6Z NAD 8.60656
670 1MV8 NAD 8.60656
671 5A1T NAI 8.60656
672 5LOG SAH 8.60656
673 2FK8 SAM 8.60656
674 5A1T OXM 8.60656
675 2G5C NAD 8.60656
676 4FBL SPD 8.60656
677 1SAY PYR 8.60656
678 2ZXI FAD 8.60656
679 5JWC FAD 8.60656
680 6GAR FAD 8.60656
681 1DCP HBI 8.65385
682 3FS1 ALA ALA LEU ALA ALA LEU LEU ALA ALA 8.69565
683 4GGZ BTN 8.69565
684 1NVT NAP 8.7108
685 2HJR APR 9.01639
686 3B1F NAD 9.01639
687 5N6C NAD 9.01639
688 1G6H ADP 9.01639
689 4RF7 ARG 9.01639
690 1E3I CXF 9.01639
691 5HSA FAS 9.01639
692 3WV8 ATP 9.17431
693 3EGI ADP 9.2233
694 2VUT NAD 9.30233
695 2ZFU SAH 9.30233
696 2HYV UAP SGN IDS SGN IDS 9.42623
697 4XQC 13D 9.42623
698 2D3N GLC GLC GLC 9.42623
699 5MB4 NDG 9.42623
700 3MCT SAH 9.42623
701 4XQC NAD 9.42623
702 2C5A GDC 9.83607
703 2C5A NAD 9.83607
704 5XVH NAP 9.83607
705 4RSL FAD 9.88764
706 1L3I SAH 9.89583
707 5ZEC NAP 10.2459
708 3KO8 NAD 10.2459
709 3SSO SAH 10.2459
710 5JE8 NAD 10.2459
711 1NPD NAD 10.2459
712 4HNN LYS 10.2459
713 4M52 M52 10.2459
714 1R37 NAD 10.3746
715 5XWV NDP 10.4839
716 5XWV 8H6 10.4839
717 1KYQ NAD 10.6557
718 9LDB NAD 10.6557
719 9LDT NAD 10.6557
720 3QV1 NAD 10.9756
721 1EK6 NAI 11.0656
722 1EK6 UPG 11.0656
723 6ECU SAH 11.0656
724 6ECW SAH 11.0656
725 5G6U TRP 11.0656
726 6BWL NAD 11.4754
727 3I6I NDP 11.4754
728 4ZVV NAD 11.4754
729 5FTW SAH 11.4754
730 4ZVV GN0 11.4754
731 3CGB FAD 11.4754
732 5K7U SAM 11.5556
733 1QG6 NAD 11.8852
734 1QG6 TCL 11.8852
735 5CG1 NAD BBN 11.8852
736 1UDB UFG 11.8852
737 1UDB NAD 11.8852
738 4OPC FDA 11.8852
739 4OPC PGT 11.8852
740 1UP7 NAD 11.8852
741 1V35 NAI 12.2951
742 1RYI FAD 12.2951
743 1RYI GOA 12.2951
744 2CUL FAD 12.5
745 3ZIA ADP 12.6984
746 1RM0 D6P 12.7049
747 1RM0 NAI 12.7049
748 5HJM MTA 12.7049
749 1O94 ADP 12.8788
750 1NNU NAD 13.1004
751 1NNU TCT 13.1004
752 5F1V 3VN 13.1148
753 1E6E FAD 13.2812
754 2Q46 NAP 13.5246
755 3A4V PYR 13.5246
756 3A4V NAD 13.5246
757 3P2E SAH 13.5246
758 4PLG NAI 13.5246
759 4PLG OXM 13.5246
760 1A5Z NAD 13.9344
761 3A06 NDP 13.9344
762 1F3L SAH 13.9344
763 1CF2 NAP 13.9344
764 3A06 FOM 13.9344
765 2E5V FAD 13.9344
766 3AD8 PYC 14.1414
767 3AD8 FAD 14.1414
768 2GAG FAD 14.1414
769 2YY7 NAD 14.7541
770 2VDV SAM 14.7541
771 1V59 NAD 14.7541
772 6F5Z SAH 14.7541
773 1V59 FAD 14.7541
774 1P77 ATR 15.1639
775 3BAZ NAP 15.5738
776 1NYT NAP 15.9836
777 3VPH NAD 15.9836
778 3VPH OXM 15.9836
779 2UYN 2KT 16.2791
780 3WMX NAD 16.4804
781 3X0D SAH 16.8033
782 2V6G NAP 17.2131
783 2Q1S NAI 17.623
784 3RFV NAI 18.4426
785 3RFV 15L 18.4426
786 5MLR NAP 18.8525
787 5MLR GRQ 18.8525
788 3O26 NDP 19.2623
789 4TQG NDP 19.6721
790 3ICT ADP 20.082
791 3ICS ADP 20.082
792 5I7S NAD 20.2899
793 5I7S E9P 20.2899
794 2F5Z FAD 20.3125
795 5E8J SAH 20.4545
796 4HXY NDP 20.4918
797 3Q87 SAM 20.8
798 4J1Q NDP 21.3115
799 1KEW NAD 21.3115
800 1KEW TYD 21.3115
801 4PIV NDP 21.3115
802 1OC2 TDX 21.3115
803 1OC2 NAD 21.3115
804 4U7W NDP 22.541
805 2PD4 DCN 22.9508
806 2PD4 NAD 22.9508
807 1SNY NAP 23.7705
808 3U4C NDP 23.7705
809 3RJ5 NAD 23.7705
810 1EQ2 NAP 24.1803
811 4ZU3 4SD 24.2291
812 5L4S NAP 24.5902
813 5L4S 6KX 24.5902
814 3CGD COA 24.5902
815 3CGD FAD 24.5902
816 3CGD NAD 24.5902
817 4YSX FAD 25.641
818 1UXG NAD 25.8197
819 1UXG FUM 25.8197
820 1W8D NAP 26.2295
821 1W73 NAP 26.2295
822 3OIG NAD 26.2295
823 2ZJ1 ARJ 26.2295
824 2ZJ1 NAD 26.2295
825 1MXH DHF 26.8116
826 1MXH NAP 26.8116
827 1W6U NAP 27.0492
828 1NFQ NAI 27.459
829 5O98 NAP 28.2787
830 5GT9 NAP 28.2787
831 2EWM NAD 29.5082
832 4Y9D NAI 29.5082
833 2BGM NAJ 30.2158
834 1E3W NAD 30.3279
835 1E6W NAD 30.3279
836 2DKN NAI 30.7377
837 1N5D NDP 30.7377
838 4FC7 COA 30.7377
839 4FC7 NAP 30.7377
840 5L53 NAP 31.1475
841 1WMA AB3 31.1475
842 1WMA NDP 31.1475
843 3JQ7 NAP 31.5574
844 4GQB 0XU 31.8182
845 1ZEM NAD 31.9672
846 1XSE NDP 31.9672
847 4K26 NDP 31.9672
848 3JQA NAP 31.9672
849 5K6A NAP 31.9672
850 4CM9 NAP 31.9672
851 4CLO NAP 31.9672
852 3JQ9 NAP 31.9672
853 5JDI NAP 31.9672
854 5JDC NAP 31.9672
855 5JCJ NAP 31.9672
856 3BMO NAP 31.9672
857 3JQF NAP 31.9672
858 4CM8 NAP 31.9672
859 3BMQ NAP 31.9672
860 3VZS NAP 31.9672
861 2WD7 NAP 31.9672
862 3JQG NAP 31.9672
863 3BMN NAP 31.9672
864 4CMI NAP 31.9672
865 3JQ8 NAP 31.9672
866 4K26 SFF 31.9672
867 4CME NAP 31.9672
868 4CLR NAP 31.9672
869 4CM4 NAP 31.9672
870 3JQB NAP 31.9672
871 2VZ0 D64 31.9672
872 2VZ0 NAP 31.9672
873 3VZS CAA 31.9672
874 5JDI 6JO 31.9672
875 5JCJ 6JM 31.9672
876 4CME KTZ 31.9672
877 4CM9 YGL 31.9672
878 5FEU NAP 32.377
879 5FFF 5XC 32.377
880 5FFF NAP 32.377
881 2X6T NAP 32.377
882 6F9Q NAD 32.7869
883 5G4L NDP 32.7869
884 3ICC NAP 33.1967
885 4YAG NAI 33.1967
886 4M38 SAH 33.3333
887 1HDC CBO 33.4646
888 2Q2V NAD 33.6066
889 5GWT NAD 33.6066
890 5GWT SIN 33.6066
891 3CH6 311 33.6066
892 3CH6 NAP 33.6066
893 4OSP NAP 33.8403
894 1UAY ADN 33.8843
895 4JP3 CIT 33.8912
896 2WSB NAD 34.0164
897 3H4V DVP 34.0164
898 3H4V NAP 34.0164
899 5THQ NDP 34.1912
900 1JA9 NDP 34.3066
901 6CI9 NAP 34.4262
902 3OID NDP 34.4262
903 3AFN NAP 34.4961
904 4O0L NDP 34.5455
905 2B4Q NAP 34.8361
906 1XHL NDP 34.8361
907 3NUG NAD 34.8361
908 5EJ2 NAD 34.8361
909 2AE2 NAP 34.8361
910 2AE2 PTO 34.8361
911 1XHL TNE 34.8361
912 5FA5 MTA 35
913 4NBW NAD 35.2459
914 3AI3 SOL 35.2459
915 1O5I NAD 35.3414
916 5O42 9JW 35.4015
917 5O42 NAD 35.4015
918 5O42 BGC 35.4015
919 4YAC NAI 35.6557
920 3O03 NAP 35.6557
921 3GEG NAD 35.6557
922 4ITU NAI 35.6877
923 4ITU 1HS 35.6877
924 1PR9 NAP 36.0656
925 3D3W NAP 36.0656
926 1A27 NAP 36.0656
927 3HB5 NAP 36.0656
928 3SJU NDP 36.4754
929 1BDB NAD 36.4754
930 1DLJ UGA 36.4754
931 1DLJ NAI 36.4754
932 1GEG NAD 36.8852
933 1XKQ NDP 36.8852
934 1ZK4 AC0 36.8852
935 1ZK4 NAP 36.8852
936 5B4T 3HR 37.2951
937 5B4T NAD 37.2951
938 2AG5 NAD 37.3984
939 3ZV6 4HB 37.7049
940 3ZV6 NAD 37.7049
941 5Z2L NDP 37.7049
942 2DTX BMA 37.7049
943 1G0N PHH 37.7049
944 1G0N NDP 37.7049
945 4FN4 NAD 38.1148
946 1AE1 NAP 38.1148
947 3A28 NAD 38.1148
948 4URF NAD 38.1148
949 2ZAT NAP 38.1148
950 3WXB NDP 38.1148
951 5OVL NAP 38.5246
952 4ZA2 NAD 38.5246
953 1H5Q NAP 38.5246
954 5OVK NDP 38.5246
955 2GDZ NAD 38.9344
956 4QED NAP 38.9344
957 4KWI NAP 38.9344
958 4KWI 1TJ 38.9344
959 4RF2 NAP 39.3443
960 1IY8 NAD 39.3443
961 1U7T TDT 39.3443
962 5YSS NAD 39.3443
963 1UZN NAP 39.3443
964 1U7T NAD 39.3443
965 5EPO NAP 39.7541
966 5T2U NAP 40.1639
967 1Q7B NAP 40.1639
968 1X1T NAD 40.1639
969 2CFC NAD 40.9836
970 2CFC KPC 40.9836
971 4CQM NAP 41.3934
972 5WUW NAP 41.8033
973 2RH4 EMO 42.623
974 4NBU NAI 43.0328
975 3SJ7 NDP 43.0328
976 2JAH NDP 43.4426
977 3V1U NAD 43.4426
978 1GZ6 NAI 43.4426
979 1VL8 NAP 43.8525
980 3QWI NAP 43.8525
981 3QWI CUE 43.8525
982 1ZBQ NAD 43.8525
983 4NBT NAD 44.1667
984 2JAP NDP 45.082
985 3TN7 NJP 45.9016
986 1XG5 NAP 46.3115
987 1EDO NAP 46.3115
988 1YXM ADE 46.3115
989 3RKR NAP 46.3115
990 3AY6 NAI 46.7213
991 3AY6 BGC 46.7213
992 1GEE NAD 47.1311
993 5OJI NAP 48.3607
994 5OJI ISN 48.3607
Pocket No.: 2; Query (leader) PDB : 2BD0; Ligand: NAP; Similar sites found with APoc: 44
This union binding pocket(no: 2) in the query (biounit: 2bd0.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 5C2N NAG None
2 2PKA BEN None
3 2FWP ICR None
4 1O8B ABF 0.913242
5 5EOO CIT 1.22951
6 4BWL MN9 1.63934
7 5YU3 NAD 2.45902
8 5YU3 PRO 2.45902
9 2JB2 FAD 2.45902
10 2JB2 PHE 2.45902
11 1H5R THM 2.45902
12 5D4V SAH 2.45902
13 2JFV FLC 2.45902
14 5AHO TLA 2.86885
15 1NAA 6FA 2.86885
16 1NAA ABL 2.86885
17 5AHN IMP 2.86885
18 4JWK CTN 3.10881
19 1EX7 5GP 3.22581
20 4O48 ASP 3.27869
21 5FI3 NAP 3.64146
22 5J60 FAD 4.09836
23 3SJH ATP 4.09836
24 1OFL ASG GCD 4.5082
25 2GDJ ANP 4.5082
26 4AML GYU 4.67836
27 2UVO NDG 4.67836
28 5VKT NAP 4.91803
29 2F5X ASP 5.12821
30 5Y8L HUI 5.32787
31 5ME4 HP4 5.7377
32 5ZA2 NXL 5.7377
33 1JQ3 AAT 5.7377
34 1BZL FAD 5.7377
35 1Q8A HCS 6.14754
36 2NSJ C2R 6.50888
37 2VSS ACO 6.55738
38 3DXY SAM 6.88073
39 4UX9 ANP 7.37705
40 2WW4 ADP 7.78689
41 3SQP FAD 7.78689
42 2P3V SRT 7.78689
43 4M1U A2G MBG 11.4754
44 5DQY BEZ 19.0476
Pocket No.: 3; Query (leader) PDB : 2BD0; Ligand: NAP; Similar sites found with APoc: 50
This union binding pocket(no: 3) in the query (biounit: 2bd0.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 4YEF 4CQ None
2 1ONI BEZ 1.44928
3 4Z28