Receptor
PDB id Resolution Class Description Source Keywords
2D6O 1.78 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF MOUSE GALECTIN-9 N-TERMINAL CRD IN COMP N-ACETYLLACTOSAMINE DIMER MUS MUSCULUS BETA SANDWICH CARBOHYDRATE BINDING PROTEIN GALECTIN SUGARPROTEIN
Ref.: CRYSTAL STRUCTURE OF THE GALECTIN-9 N-TERMINAL CARB RECOGNITION DOMAIN FROM MUS MUSCULUS REVEALS THE BA MECHANISM OF CARBOHYDRATE RECOGNITION J.BIOL.CHEM. V. 281 35884 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL X:301;
Invalid;
none;
submit data
92.094 C3 H8 O3 C(C(C...
NAG GAL GAL NAG X:158;
Valid;
none;
submit data
748.685 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2D6M 1.6 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF MOUSE GALECTIN-9 N-TERMINAL CRD IN COMPLEX WITH LACTOSE MUS MUSCULUS BETA SANDWICH CARBOHYDRATE BINDING PROTEIN GALECTIN SUGARBINDING PROTEIN
Ref.: CRYSTAL STRUCTURE OF THE GALECTIN-9 N-TERMINAL CARBOHYDRATE RECOGNITION DOMAIN FROM MUS MUSCULUS REVEALS THE BASIC MECHANISM OF CARBOHYDRATE RECOGNITION J.BIOL.CHEM. V. 281 35884 2006
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 2D6N - GAL NAG n/a n/a
2 2D6M - LBT C12 H22 O11 C([C@@H]1[....
3 2D6O - NAG GAL GAL NAG n/a n/a
70% Homology Family (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 2D6N - GAL NAG n/a n/a
2 2D6M - LBT C12 H22 O11 C([C@@H]1[....
3 2D6O - NAG GAL GAL NAG n/a n/a
4 2EAL - GAL NGA A2G n/a n/a
5 2ZHL Kd = 3 uM NAG GAL GAL NAG n/a n/a
6 2ZHK Kd = 3 uM NAG GAL GAL NAG n/a n/a
7 2ZHN - NAG GAL NAG GAL GAL NAG n/a n/a
8 2ZHM - NAG GAL GAL NAG GAL n/a n/a
9 2EAK - LBT C12 H22 O11 C([C@@H]1[....
10 3WLU - LSE C18 H36 O10 Se Si C[Si](C)(C....
50% Homology Family (109)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 5NF9 Kd = 4.7 uM 8VW C22 H32 N2 O12 CC(=O)N[C@....
2 5E8A Kd = 0.034 uM 5KS C28 H30 F2 N6 O8 S c1cc(ccc1c....
3 1A3K - GAL NAG n/a n/a
4 3T1M Kd = 0.91 mM DQT C23 H27 N O7 Cc1ccc(cc1....
5 4LBL Kd = 11 uM BGC SIA GAL n/a n/a
6 2NMN Kd = 260 uM GAL BGC n/a n/a
7 4R9B - LAT C12 H22 O11 C([C@@H]1[....
8 2NN8 Kd = 260 uM LAT C12 H22 O11 C([C@@H]1[....
9 4JC1 Kd = 50 uM TDG C12 H22 O10 S C([C@@H]1[....
10 4R9A - LAT C12 H22 O11 C([C@@H]1[....
11 5EXO - 5SY C19 H22 O9 CC(=O)O[C@....
12 5ODY Kd = 7.5 nM 9SK C30 H28 F5 N3 O11 S c1cc(c(c2c....
13 5E88 Kd = 0.065 uM 5KT C24 H28 N6 O8 S3 c1cscc1c2c....
14 4R9D - LAT C12 H22 O11 C([C@@H]1[....
15 1KJL Kd = 67 uM GAL NAG n/a n/a
16 3T1L Kd = 0.55 mM MQT C17 H22 O8 Cc1ccc(cc1....
17 2XG3 Kd = 18.2 uM UNU GAL NAG n/a n/a
18 4LBJ Kd = 0.39 uM GAL NAG GAL BGC n/a n/a
19 4R9C - LAT C12 H22 O11 C([C@@H]1[....
20 3ZSJ Kd = 231 uM LAT C12 H22 O11 C([C@@H]1[....
21 4LBM Kd = 0.97 uM BGC GAL NAG GAL n/a n/a
22 1KJR Kd = 0.88 uM BEK GAL NAG n/a n/a
23 6EOL Kd = 0.037 uM BKH C20 H16 Cl2 F3 N3 O4 S c1cc(c(cc1....
24 6G0V Kd = 166 uM EGZ C18 H25 N O13 S C1[C@H](NC....
25 3AYE - LAT C12 H22 O11 C([C@@H]1[....
26 6EOG Kd = 1.6 uM BKK C20 H17 Cl F3 N3 O4 S c1cc(cc(c1....
27 5E89 Kd = 0.014 uM TD2 C28 H30 F2 N6 O8 S c1cc(cc(c1....
28 4LBO Kd = 1.7 uM BGC GAL SIA n/a n/a
29 2NMO Kd = 260 uM GAL BGC n/a n/a
30 3AYC Kd = 57 uM GAL NGA GAL BGC SIA n/a n/a
31 4JCK Kd = 4.3 mM 1LL C12 H22 O10 S C([C@@H]1[....
32 5NFA Kd = 5.6 uM 8VQ C24 H36 N2 O12 CC(=O)N[C@....
33 4LBK Kd = 0.32 uM GAL NAG GAL BGC n/a n/a
34 5OAX Kd = 12 nM 9Q5 C30 H30 F3 N3 O11 S c1cc(cc(c1....
35 4RL7 - LAT C12 H22 O11 C([C@@H]1[....
36 3AYD Kd = 65 uM NPO A2G GAL n/a n/a
37 4LBN Kd = 0.65 uM GLC GAL NAG GAL n/a n/a
38 1G86 - NEQ C6 H7 N O2 CCN1C(=O)C....
39 1QKQ - MAN C6 H12 O6 C([C@@H]1[....
40 1HDK - PMB C6 H5 Hg O3 S c1cc(ccc1S....
41 2D6N - GAL NAG n/a n/a
42 2D6M - LBT C12 H22 O11 C([C@@H]1[....
43 2D6O - NAG GAL GAL NAG n/a n/a
44 4XBN Kd = 93 uM GAL NAG n/a n/a
45 5H9R Kd = 0.84 uM TGZ C20 H26 F N3 O9 S c1cc(cc(c1....
46 5H9P Kd = 0.068 uM TD2 C28 H30 F2 N6 O8 S c1cc(cc(c1....
47 5DG2 - GAL GLC n/a n/a
48 5EWS - GAL BGC n/a n/a
49 5NM1 - LBT C12 H22 O11 C([C@@H]1[....
50 5NLD - LBT C12 H22 O11 C([C@@H]1[....
51 5NMJ - LBT C12 H22 O11 C([C@@H]1[....
52 5NLH - LBT C12 H22 O11 C([C@@H]1[....
53 5NLE - LBT C12 H22 O11 C([C@@H]1[....
54 4XBL Kd = 340 uM GAL NAG n/a n/a
55 4Y24 Kd = 0.22 uM TD2 C28 H30 F2 N6 O8 S c1cc(cc(c1....
56 3T2T - MQT C17 H22 O8 Cc1ccc(cc1....
57 3OY8 Kd = 220 uM GAL GCO n/a n/a
58 2EAL - GAL NGA A2G n/a n/a
59 2ZHL Kd = 3 uM NAG GAL GAL NAG n/a n/a
60 2ZHK Kd = 3 uM NAG GAL GAL NAG n/a n/a
61 2ZHN - NAG GAL NAG GAL GAL NAG n/a n/a
62 2ZHM - NAG GAL GAL NAG GAL n/a n/a
63 2EAK - LBT C12 H22 O11 C([C@@H]1[....
64 3WLU - LSE C18 H36 O10 Se Si C[Si](C)(C....
65 5H9S Kd = 87 uM TGZ C20 H26 F N3 O9 S c1cc(cc(c1....
66 5H9Q Kd = 38 uM TD2 C28 H30 F2 N6 O8 S c1cc(cc(c1....
67 4XBQ Kd = 270 uM GAL NAG n/a n/a
68 6A62 - LAT C12 H22 O11 C([C@@H]1[....
69 6A64 - LAT C12 H22 O11 C([C@@H]1[....
70 6A63 - LAT C12 H22 O11 C([C@@H]1[....
71 5T7S Kd = 3.1 uM LBT C12 H22 O11 C([C@@H]1[....
72 4BMB Ka = 13000 M^-1 LAT C12 H22 O11 C([C@@H]1[....
73 5T7I Kd = 0.33 uM LAT NAG GAL n/a n/a
74 3VKO - SIA GAL NAG n/a n/a
75 4BME Ka = 13000 M^-1 LBT C12 H22 O11 C([C@@H]1[....
76 5T7T Kd = 2.1 uM GAL NAG n/a n/a
77 3I8T Kd = 600 uM LBT C12 H22 O11 C([C@@H]1[....
78 3WV6 - GAL BGC n/a n/a
79 3NV2 - GAL NDG n/a n/a
80 3NV4 - SIA GAL BGC n/a n/a
81 3NV3 - GAL NAG MAN n/a n/a
82 3WUD Kd = 41 uM GLC GAL n/a n/a
83 3GAL - 1GN C6 H13 N O5 C([C@@H]1[....
84 4UW6 - VV7 C69 H73 N20 O39 [H]1c2c(cc....
85 2GAL - GAL C6 H12 O6 C([C@@H]1[....
86 4GAL - GAL BGC n/a n/a
87 4UW3 - 50G C31 H50 N10 O18 c1c(nnn1[C....
88 4UW4 - 4S0 C49 H80 N10 O33 c1c(nnn1[C....
89 3ZXE Kd = 450 uM PGZ C22 H28 N O8 P S Cc1ccc(cc1....
90 5GAL - NAG GAL n/a n/a
91 4UW5 - 4S0 C49 H80 N10 O33 c1c(nnn1[C....
92 1A78 - TDG C12 H22 O10 S C([C@@H]1[....
93 5DUW Kd = 510 uM 5GO C12 H22 O14 S C([C@@H]1[....
94 5DUV Kd = 1300 uM LAT C12 H22 O11 C([C@@H]1[....
95 5DUX Kd = 380 uM LAT FUC n/a n/a
96 4WVV - LBT C12 H22 O11 C([C@@H]1[....
97 4WVW - SLT C23 H39 N O19 CC(=O)N[C@....
98 4YLZ Kd = 270 uM LAT NAG GAL n/a n/a
99 5CBL - LAT C12 H22 O11 C([C@@H]1[....
100 4YM0 Kd = 510 uM LAT NAG GAL n/a n/a
101 4YM2 Kd = 1400 uM SGA BGC n/a n/a
102 4YM3 Kd = 1900 uM LAT C12 H22 O11 C([C@@H]1[....
103 4YM1 Kd = 580 uM LAT FUC n/a n/a
104 1IS4 - LAT C12 H22 O11 C([C@@H]1[....
105 1WLD - GAL BGC n/a n/a
106 6FOF - LAT C12 H22 O11 C([C@@H]1[....
107 5NFB Kd = 0.77 uM 8VT C30 H40 N2 O13 CC(=O)N[C@....
108 5NF7 Kd = 37.5 uM 8VZ C16 H28 N2 O11 CC(=O)N[C@....
109 1SLA - NAG MAN GAL BMA NAG MAN NAG GAL n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAG GAL GAL NAG; Similar ligands found: 251
No: Ligand ECFP6 Tc MDL keys Tc
1 NAG GAL GAL NAG 1 1
2 GAL NAG GAL NAG GAL NAG 1 0.979592
3 GLA GAL NAG 0.852941 0.9375
4 MAN BMA NAG 0.852941 0.9375
5 GLC GAL NAG GAL 0.824324 0.9375
6 LAT NAG GAL 0.824324 0.9375
7 NAG GAL NAG 0.819444 1
8 NAG GAL GAL NAG GAL 0.810811 1
9 NAG NAG BMA MAN MAN 0.771084 1
10 GAL NAG GAL BGC 0.746835 0.9
11 NDG GAL 0.746269 0.9375
12 GAL NDG 0.746269 0.9375
13 NLC 0.746269 0.9375
14 NAG MAN MAN MAN NAG GAL NAG GAL 0.719101 0.979592
15 MAN BMA NAG NAG MAN NAG GAL GAL 0.719101 0.979592
16 NAG NAG NAG NAG NAG NAG NAG NAG 0.69863 0.979592
17 NDG NAG NAG 0.69863 0.979592
18 NAG NAG NDG NAG 0.69863 0.979592
19 NDG NAG NAG NAG 0.69863 0.979592
20 NAG NAG NAG NDG 0.69863 0.979592
21 NAG NAG NAG NAG NAG 0.69863 0.979592
22 NAG NAG NAG NAG NAG NAG 0.69863 0.979592
23 NDG NAG NAG NDG 0.69863 0.979592
24 NAG NAG NAG NAG NDG 0.69863 0.979592
25 NAG NAG NDG 0.69863 0.979592
26 CTO 0.69863 0.979592
27 NAG NAG BMA MAN 0.690476 0.923077
28 FUC BGC GAL NAG GAL 0.689655 0.958333
29 GAL NAG MAN 0.684211 0.9375
30 NAG MAN BMA NDG MAN NAG GAL 0.680851 0.979592
31 NAG NAG BMA MAN MAN NAG GAL NAG 0.673684 0.979592
32 NAG NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.659794 1
33 NGA GLA GAL BGC 0.658537 0.9375
34 NAG GAL BGC 0.658228 0.9375
35 TCG 0.65 0.827586
36 CBS 0.643836 1
37 NAG GDL 0.643836 1
38 CBS CBS 0.643836 1
39 NDG NAG 0.643836 1
40 GAL NAG GAL GLC 0.641975 0.9375
41 BGC GAL NAG GAL 0.641975 0.9375
42 NAG BMA MAN MAN MAN MAN 0.636364 0.9375
43 GAL NGA GLA BGC GAL 0.630952 0.9375
44 GAL NAG GAL 0.62963 0.9
45 NAG BMA NAG MAN MAN NAG NAG 0.621053 0.979592
46 M5G 0.606061 1
47 NAG NAG BMA 0.60241 0.923077
48 NAG NDG BMA 0.60241 0.923077
49 BMA NAG MAN MAN MAN MAN MAN MAN MAN 0.595745 0.9375
50 FUC C4W NAG BMA MAN 0.575758 0.923077
51 G6S NAG 0.573171 0.71875
52 GAL BGC NAG GAL 0.571429 0.9375
53 NAG FUC 0.565789 0.916667
54 A2G GAL NAG FUC 0.554348 0.979592
55 FUC GAL NAG A2G 0.554348 0.979592
56 GLA GAL GAL 0.546667 0.6875
57 8VZ 0.539474 0.979592
58 BGC BGC BGC BGC BGC BGC BGC BGC 0.538462 0.6875
59 GAL GLC NAG GAL FUC 0.536842 0.958333
60 GLC NAG GAL GAL FUC 0.536842 0.958333
61 FUC GAL NAG GAL BGC 0.536842 0.958333
62 GAL NAG FUC 0.535714 0.958333
63 DR2 0.535714 0.958333
64 NAG GAL FUC 0.535714 0.958333
65 FUC GAL NDG 0.535714 0.958333
66 FUC GAL NAG 0.535714 0.958333
67 NDG GAL FUC 0.535714 0.958333
68 FUL GAL NAG 0.535714 0.958333
69 NAG MAN BMA MAN NAG GAL 0.535354 1
70 NAG NAG BMA BMA 0.533333 0.888889
71 FUC BGC GAL NAG 0.532609 0.958333
72 GLC GAL NAG GAL FUC FUC 0.530612 0.938776
73 BGC GAL NAG GAL FUC FUC 0.530612 0.938776
74 NGA GAL BGC 0.53012 0.9375
75 GLA GAL NAG FUC GAL GLC 0.525253 0.958333
76 NAG NAG BMA MAN MAN MAN MAN 0.523364 0.923077
77 A2G GAL 0.519481 0.9375
78 GAL A2G 0.519481 0.9375
79 GAL NGA 0.519481 0.9375
80 NAG MBG 0.518987 0.938776
81 A2G GAL NAG FUC GAL GLC 0.514563 0.979592
82 GLC GAL NAG GAL FUC A2G 0.514563 0.979592
83 SIA GAL NAG GAL BGC 0.513043 0.90566
84 SIA GAL NAG GAL GLC 0.513043 0.90566
85 BGC GAL NAG SIA GAL 0.513043 0.90566
86 GAL NAG 0.506329 0.9375
87 NAG GAL 0.506329 0.9375
88 NAG GCU NAG GCD 0.5 0.888889
89 FUC C4W NAG BMA 0.5 0.923077
90 NAG NAG FUL BMA MAN MAN NAG GAL 0.495575 0.90566
91 UNU GAL NAG 0.494505 0.94
92 SN5 SN5 0.493827 0.826923
93 BGC BGC BGC GLC BGC BGC 0.493333 0.6875
94 GLC BGC BGC BGC BGC BGC BGC 0.493333 0.6875
95 GAL NAG GAL FUC 0.48913 0.958333
96 GLA NAG GAL FUC 0.48913 0.958333
97 NAG NAG NAG NAG 0.488636 0.90566
98 NAG NAG NAG 0.488636 0.90566
99 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.484536 1
100 1GN ACY GAL ACY 1GN BGC GAL BGC 0.484536 1
101 GAL NGA A2G 0.482353 1
102 GAL MGC 0.481013 0.938776
103 4U2 0.475728 0.941176
104 GAL NDG FUC 0.471264 0.958333
105 FUC NDG GAL 0.471264 0.958333
106 HS2 0.471264 0.862745
107 NAG SIA GAL 0.466667 0.923077
108 FUC C4W NAG BMA MAN MAN NAG 0.466102 0.923077
109 NAG MAN MMA 0.465909 0.938776
110 NAG NAG BMA MAN MAN NAG NAG 0.463636 0.90566
111 NAG A2G 0.463415 1
112 NAG NGA 0.463415 1
113 NAG BMA 0.463415 0.846154
114 GCS GCS NAG 0.462366 0.901961
115 NAG A2G GAL 0.461538 1
116 MBG A2G 0.457831 0.938776
117 A2G MBG 0.457831 0.938776
118 MAN MAN MAN GLC 0.457831 0.6875
119 GAL NAG SIA GAL 0.45614 0.90566
120 NAG MAN BMA 0.454545 0.9375
121 M13 0.453333 0.693878
122 GAL MBG 0.453333 0.693878
123 MDM 0.453333 0.693878
124 NAG NAG BMA MAN NAG 0.45283 0.90566
125 Z4S NAG NAG 0.451613 0.90566
126 NOJ NAG NAG NAG 0.451613 0.857143
127 NOJ NAG NAG 0.451613 0.872727
128 NAG GAL NGC 0.45045 0.886792
129 LAT 0.445946 0.6875
130 BGC GAL 0.445946 0.6875
131 CBI 0.445946 0.6875
132 GLC GAL 0.445946 0.6875
133 LBT 0.445946 0.6875
134 BMA GAL 0.445946 0.6875
135 MAB 0.445946 0.6875
136 GLA GLA 0.445946 0.6875
137 GAL BGC 0.445946 0.6875
138 BGC BMA 0.445946 0.6875
139 MAL 0.445946 0.6875
140 N9S 0.445946 0.6875
141 B2G 0.445946 0.6875
142 CBK 0.445946 0.6875
143 GLA GAL 0.445946 0.6875
144 A2G GAL BGC FUC 0.444444 0.958333
145 NAG GAL SIA 0.444444 0.90566
146 4U1 0.444444 0.923077
147 BMA MAN BMA 0.441558 0.6875
148 MAN MAN BMA BMA BMA BMA 0.441558 0.6875
149 CE6 0.441558 0.6875
150 MTT 0.441558 0.6875
151 GLC BGC BGC BGC 0.441558 0.6875
152 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.441558 0.6875
153 BGC BGC BGC GLC 0.441558 0.6875
154 CTR 0.441558 0.6875
155 GLA GAL BGC 0.441558 0.6875
156 BMA BMA BMA 0.441558 0.6875
157 BGC GLC GLC 0.441558 0.6875
158 GLC GLC GLC GLC GLC 0.441558 0.6875
159 GLC BGC BGC BGC BGC 0.441558 0.6875
160 BGC GLC GLC GLC GLC GLC GLC 0.441558 0.6875
161 CEX 0.441558 0.6875
162 GLC GAL GAL 0.441558 0.6875
163 MAN BMA BMA 0.441558 0.6875
164 MLR 0.441558 0.6875
165 CE5 0.441558 0.6875
166 MAN BMA BMA BMA BMA 0.441558 0.6875
167 BGC BGC BGC BGC BGC 0.441558 0.6875
168 BMA BMA BMA BMA BMA 0.441558 0.6875
169 MT7 0.441558 0.6875
170 GLC BGC BGC BGC BGC BGC 0.441558 0.6875
171 U63 0.441558 0.634615
172 DXI 0.441558 0.6875
173 MAN BMA BMA BMA BMA BMA 0.441558 0.6875
174 BGC BGC BGC BGC BGC BGC 0.441558 0.6875
175 GLC BGC BGC 0.441558 0.6875
176 BGC BGC BGC 0.441558 0.6875
177 BGC BGC GLC 0.441558 0.6875
178 BGC GLC GLC GLC 0.441558 0.6875
179 GLA GAL GLC 0.441558 0.6875
180 BGC GLC GLC GLC GLC 0.441558 0.6875
181 GAL GAL GAL 0.441558 0.6875
182 CE8 0.441558 0.6875
183 GLC GLC BGC 0.441558 0.6875
184 BGC BGC BGC BGC 0.441558 0.6875
185 B4G 0.441558 0.6875
186 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.441558 0.6875
187 GLC BGC GLC 0.441558 0.6875
188 CEY 0.441558 0.6875
189 BMA BMA BMA BMA BMA BMA 0.441558 0.6875
190 CTT 0.441558 0.6875
191 CT3 0.441558 0.6875
192 KPM 0.438776 0.903846
193 NAG NAG NGT 0.4375 0.813559
194 BEK GAL NAG 0.435644 0.842105
195 FUC GAL A2G 0.428571 0.958333
196 A2G GAL FUC 0.428571 0.958333
197 FUC GLA A2G 0.428571 0.958333
198 NGA GAL FUC 0.428571 0.958333
199 A2G GLA FUC 0.428571 0.958333
200 LB2 0.426667 0.6875
201 M3M 0.426667 0.6875
202 MAN GLC 0.426667 0.6875
203 NGR 0.426667 0.6875
204 DLD 0.425532 0.827586
205 FUC C4W NAG BMA MAN MAN NAG NAG 0.425 0.923077
206 FUC GAL NAG GAL FUC 0.424242 0.938776
207 NAG AMU NAG AMV 0.424242 0.941176
208 NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.422018 0.865385
209 NAG GAL FUC FUC A2G 0.421569 0.979592
210 FUC GAL NAG A2G FUC 0.421569 0.979592
211 ASN NAG NAG BMA MAN MAN NAG NAG 0.420168 0.872727
212 GAL A2G MBN 0.419355 0.9
213 NGA GAL 0.418605 0.88
214 GLC GLC XYP 0.418605 0.6875
215 GLA EGA 0.417722 0.693878
216 ASG 0.417722 0.65625
217 A2G SER GAL 0.417582 0.903846
218 GAL TNR 0.417582 0.903846
219 NGA SER GAL 0.417582 0.903846
220 GAL SER A2G 0.417582 0.903846
221 8VW 0.415842 0.90566
222 MMA MAN 0.415584 0.693878
223 DR5 0.415584 0.693878
224 NAG AMU 0.414894 0.96
225 NAG MUB 0.414894 0.96
226 GAL LOG 0.413793 0.793103
227 LAT GLA 0.413333 0.6875
228 AO3 0.411765 0.738462
229 NAA NAA AMI 0.411765 0.738462
230 UMG 0.409524 0.857143
231 NAG NAG 0.409091 0.903846
232 NAG NDG 0.409091 0.903846
233 GAL A2G THR 0.408602 0.941176
234 6Y2 0.408163 0.75
235 MAG FUC GAL 0.406593 0.92
236 BGC FUC GAL FUC A2G 0.405941 0.938776
237 NAG BDP NAG BDP NAG BDP NAG 0.405941 0.96
238 GLC FUC GAL FUC A2G 0.405941 0.938776
239 FUC GAL NAG FUC 0.404255 0.938776
240 FUC NDG GAL FUC 0.404255 0.938776
241 FUC GAL NDG FUC 0.404255 0.938776
242 GAL NDG FUC FUC 0.404255 0.938776
243 GAL NAG FUC FUC 0.404255 0.938776
244 NAG MAN MAN 0.404255 0.9375
245 BCW 0.404255 0.938776
246 BDZ 0.404255 0.938776
247 FUC NAG GAL FUC 0.404255 0.938776
248 NAG MAN MAN MAN NAG 0.40404 1
249 WZ5 0.403846 0.938776
250 NDG BDP BDP NPO NDG 0.401786 0.75
251 FUC C4W NAG BMA MAN NAG 0.401709 0.923077
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2D6M; Ligand: LBT; Similar sites found with APoc: 2
This union binding pocket(no: 1) in the query (biounit: 2d6m.bio2) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 3M3E GAL A2G NPO 20.1258
2 3VV1 GAL FUC 39.6226
Pocket No.: 2; Query (leader) PDB : 2D6M; Ligand: LBT; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2d6m.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2D6M; Ligand: LBT; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2d6m.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2D6M; Ligand: LBT; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2d6m.bio3) has 9 residues
No: Leader PDB Ligand Sequence Similarity
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