Receptor
PDB id Resolution Class Description Source Keywords
2DQA 1.6 Å EC: 3.2.1.17 CRYSTAL STRUCTURE OF TAPES JAPONICA LYSOZYME TAPES JAPONICA LYSOZYME ENZYME SUBSTRATE COMPLEX HYDROLASE
Ref.: CRYSTAL STRUCTURE OF TAPES JAPONICA LYSOZYME WITH S ANALOGUE: STRUCTURAL BASIS OF THE CATALYTIC MECHANI MANIFESTATION OF ITS CHITINASE ACTIVITY ACCOMPANIED QUATERNARY STRUCTURAL CHANGE J.BIOL.CHEM. V. 282 27459 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BGC B:2001;
B:3001;
Invalid;
Invalid;
none;
none;
submit data
180.156 C6 H12 O6 C([C@...
NAG NAG NAG C:1;
D:1;
Valid;
Valid;
none;
none;
submit data
611.598 n/a O=C(N...
PT A:1201;
A:1205;
A:1206;
A:1211;
B:1202;
C:1212;
D:1213;
D:1214;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
195.078 Pt [Pt+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2DQA 1.6 Å EC: 3.2.1.17 CRYSTAL STRUCTURE OF TAPES JAPONICA LYSOZYME TAPES JAPONICA LYSOZYME ENZYME SUBSTRATE COMPLEX HYDROLASE
Ref.: CRYSTAL STRUCTURE OF TAPES JAPONICA LYSOZYME WITH S ANALOGUE: STRUCTURAL BASIS OF THE CATALYTIC MECHANI MANIFESTATION OF ITS CHITINASE ACTIVITY ACCOMPANIED QUATERNARY STRUCTURAL CHANGE J.BIOL.CHEM. V. 282 27459 2007
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 17 families.
1 2DQA - NAG NAG NAG n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 12 families.
1 2DQA - NAG NAG NAG n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 8 families.
1 2DQA - NAG NAG NAG n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAG NAG NAG; Similar ligands found: 125
No: Ligand ECFP6 Tc MDL keys Tc
1 NAG NAG NAG 1 1
2 NAG NDG 0.890625 0.962264
3 NAG NAG 0.890625 0.962264
4 NAG NAG BMA 0.830986 0.981132
5 NAG NDG BMA 0.830986 0.981132
6 NAG NAG BMA MAN 0.7375 0.981132
7 NAG NAG BMA MAN NAG 0.735632 1
8 NAG NAG BMA BMA 0.730769 0.981481
9 NAG NAG BMA MAN MAN NAG NAG 0.680851 1
10 NAG NAG NDG NAG 0.680556 0.924528
11 NAG NAG NAG NAG 0.680556 0.924528
12 NDG NAG NAG NDG 0.680556 0.924528
13 CTO 0.680556 0.924528
14 NAG NAG NAG NAG NDG 0.680556 0.924528
15 NDG NAG NAG NAG 0.680556 0.924528
16 NAG NAG NAG NAG NAG 0.680556 0.924528
17 NAG NAG NAG NAG NAG NAG NAG NAG 0.680556 0.924528
18 NAG NAG NDG 0.680556 0.924528
19 NDG NAG NAG 0.680556 0.924528
20 NAG NAG NAG NDG 0.680556 0.924528
21 NAG NAG NAG NAG NAG NAG 0.680556 0.924528
22 NAG BMA 0.647887 0.90566
23 Z4S NAG NAG 0.62963 0.859649
24 NOJ NAG NAG NAG 0.62963 0.912281
25 NOJ NAG NAG 0.62963 0.894737
26 NAG GDL 0.625 0.90566
27 NDG NAG 0.625 0.90566
28 CBS CBS 0.625 0.90566
29 CBS 0.625 0.90566
30 NAG NAG BMA MAN MAN MAN MAN 0.584158 0.981132
31 A2G MBG 0.573333 0.851852
32 MBG A2G 0.573333 0.851852
33 NGA GAL 0.565789 0.867925
34 GAL NAG GAL 0.554217 0.886792
35 NAG NAG NGT 0.551724 0.777778
36 GAL NAG GAL BGC 0.551724 0.886792
37 NGA GAL BGC 0.55 0.849057
38 DLD 0.541176 0.790323
39 NAG AMU NAG AMV 0.533333 0.890909
40 3QL 0.530864 0.842105
41 GAL NAG MAN 0.52439 0.849057
42 MAN MAN NAG 0.52381 0.886792
43 NAG GAL NAG 0.52381 0.90566
44 NAG NGA 0.519481 0.90566
45 NAG A2G 0.519481 0.90566
46 TCG 0.517647 0.790323
47 6Y2 0.516854 0.720588
48 NAA NAA AMI 0.516129 0.710145
49 AO3 0.516129 0.710145
50 NAG MAN BMA 0.506024 0.849057
51 NAG GAL GAL NAG GAL 0.505747 0.90566
52 NAG MBG 0.5 0.851852
53 GAL NGA A2G 0.5 0.90566
54 NAG NAG FUL BMA MAN MAN NAG GAL 0.495495 1
55 UMG 0.494845 0.816667
56 NAG MAN BMA MAN NAG GAL 0.49 0.90566
57 NAG GAL GAL NAG 0.488636 0.90566
58 GAL NAG GAL NAG GAL NAG 0.488636 0.924528
59 NAG GAL BGC 0.488372 0.849057
60 NAG MAN 0.4875 0.886792
61 GLC GAL NAG GAL 0.483146 0.849057
62 LAT NAG GAL 0.483146 0.849057
63 NGT NAG 0.482759 0.761905
64 NAG BMA NAG MAN MAN NAG NAG 0.480392 0.924528
65 NGA GLA GAL BGC 0.477778 0.849057
66 AH0 NAG 0.477273 0.844828
67 SN5 SN5 0.475 0.754386
68 GUM 0.474227 0.816667
69 NAG MAN MAN 0.465909 0.849057
70 NAG MAN MMA 0.465116 0.851852
71 MAG 0.464789 0.796296
72 2F8 0.464789 0.796296
73 A2G GAL 0.4625 0.90566
74 NAG MAN MAN MAN NAG 0.462366 0.90566
75 NAG BMA MAN MAN MAN MAN MAN MAN MAN 0.461538 0.924528
76 NAG MUB 0.460674 0.907407
77 NAG AMU 0.460674 0.907407
78 FUC GLA A2G 0.45977 0.867925
79 A2G GAL FUC 0.45977 0.867925
80 FUC GAL A2G 0.45977 0.867925
81 NGA GAL FUC 0.45977 0.867925
82 A2G GLA FUC 0.45977 0.867925
83 GN1 0.459459 0.709677
84 NG1 0.459459 0.709677
85 A2G GAL NAG FUC 0.458333 0.924528
86 FUC GAL NAG A2G 0.458333 0.924528
87 NAG NAG BMA MAN MAN NAG GAL NAG 0.457944 0.924528
88 NAG NM9 0.454545 0.890909
89 FHY 0.452632 0.859649
90 NAG AH0 0.451613 0.844828
91 NA1 NAA AMI 0.45098 0.7
92 NAG MAN BMA NDG MAN NAG GAL 0.448598 0.924528
93 JXD 0.447619 0.728571
94 GAL NDG 0.443038 0.849057
95 NLC 0.443038 0.849057
96 5AX 0.442857 0.830189
97 NAG NAG BMA MAN MAN 0.44 0.90566
98 FUC BGC GAL NAG GAL 0.44 0.867925
99 NDG BDP BDP NPO NDG 0.439252 0.720588
100 MMA MAN NAG MAN NAG NAG 0.4375 0.907407
101 FUC BGC GAL NAG 0.4375 0.867925
102 BMA Z4Y NAG 0.43617 0.833333
103 GLC FUC GAL FUC A2G 0.43299 0.886792
104 BGC FUC GAL FUC A2G 0.43299 0.886792
105 GYU 0.432099 0.813559
106 A2G GAL BGC FUC 0.428571 0.867925
107 A2G GAL GLC FUC 0.428571 0.867925
108 GAL BGC NAG NAG GAL GAL 0.425743 0.90566
109 FUC C4W NAG BMA 0.425743 0.875
110 8VZ 0.425 0.888889
111 FUC C4W NAG BMA MAN NAG 0.424779 0.875
112 SN5 SN5 NGT 0.421053 0.6875
113 3YW 0.4125 0.811321
114 FUC NAG 0.411765 0.924528
115 ASN NAG NAG BMA MAN MAN NAG NAG 0.40678 0.894737
116 LEC NGA 0.40625 0.720588
117 FUC GAL NAG A2G FUC 0.405941 0.924528
118 NAG GAL FUC FUC A2G 0.405941 0.924528
119 NAG BDP NAG BDP NAG BDP NAG 0.40404 0.907407
120 MAN BMA NAG NAG MAN NAG GAL GAL 0.401869 0.924528
121 NAG MAN MAN MAN NAG GAL NAG GAL 0.401869 0.924528
122 NAG BMA MAN MAN NAG GAL NAG GAL 0.401869 0.924528
123 ALA NAG AH0 DAL 0.4 0.830508
124 FUC C4W NAG BMA MAN MAN NAG NAG 0.4 0.875
125 MA8 0.4 0.821429
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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