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Receptor
PDB id Resolution Class Description Source Keywords
2DYS 2.2 Å EC: 1.9.3.1 BOVINE HEART CYTOCHROME C OXIDASE MODIFIED BY DCCD BOS TAURUS OXIDOREDUCTASE
Ref.: STRUCTURES AND PHYSIOLOGICAL ROLES OF 13 INTEGRAL L BOVINE HEART CYTOCHROME C OXIDASE EMBO J. V. 26 1713 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CDL C:309;
G:101;
P:309;
T:102;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
1464.04 C81 H156 O17 P2 CCCCC...
CHD B:304;
C:304;
C:310;
J:101;
O:302;
P:304;
P:310;
W:101;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
408.571 C24 H40 O5 C[C@H...
CU A:601;
N:601;
Part of Protein;
Part of Protein;
none;
none;
submit data
63.546 Cu [Cu+2...
CUA B:301;
O:301;
Part of Protein;
Part of Protein;
none;
none;
submit data
127.092 Cu2 [Cu][...
DCW C:301;
P:301;
Part of Protein;
Part of Protein;
none;
none;
submit data
224.342 C13 H24 N2 O C1CCC...
DMU C:302;
M:101;
P:302;
Z:101;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
482.562 C22 H42 O11 CCCCC...
HEA A:604;
A:605;
N:604;
N:605;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
852.837 C49 H56 Fe N4 O6 Cc1c2...
MG A:602;
N:602;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
NA A:603;
N:603;
Part of Protein;
Part of Protein;
none;
none;
submit data
22.99 Na [Na+]
PEK C:305;
C:306;
G:102;
P:305;
P:306;
T:101;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
768.055 C43 H78 N O8 P CCCCC...
PGV A:606;
A:607;
C:307;
C:308;
N:608;
N:609;
P:307;
P:308;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
749.007 C40 H77 O10 P CCCCC...
PSC B:303;
O:304;
Valid;
Valid;
none;
none;
submit data
759.068 C42 H81 N O8 P CCCCC...
TGL B:302;
D:201;
L:101;
N:606;
N:607;
O:303;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
891.48 C57 H110 O6 CCCCC...
UNX C:303;
P:303;
Invalid;
Invalid;
none;
none;
submit data
n/a X *
ZN F:101;
S:101;
Part of Protein;
Part of Protein;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2DYS 2.2 Å EC: 1.9.3.1 BOVINE HEART CYTOCHROME C OXIDASE MODIFIED BY DCCD BOS TAURUS OXIDOREDUCTASE
Ref.: STRUCTURES AND PHYSIOLOGICAL ROLES OF 13 INTEGRAL L BOVINE HEART CYTOCHROME C OXIDASE EMBO J. V. 26 1713 2007
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 2DYS - PEK C43 H78 N O8 P CCCCCCCCCC....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 2DYS - PEK C43 H78 N O8 P CCCCCCCCCC....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 6 families.
1 2DYS - PEK C43 H78 N O8 P CCCCCCCCCC....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: PEK; Similar ligands found: 86
No: Ligand ECFP6 Tc MDL keys Tc
1 PEK 1 1
2 GP7 0.873418 1
3 ZPE 0.844156 1
4 L9Q 0.818182 1
5 6OU 0.818182 1
6 LOP 0.818182 1
7 PSC 0.785714 0.79661
8 8PE 0.77027 0.980769
9 PEF 0.77027 0.980769
10 PTY 0.77027 0.980769
11 PEH 0.77027 0.980769
12 PEV 0.77027 0.980769
13 9PE 0.76 0.980769
14 EPH 0.741573 1
15 T7X 0.727273 0.711864
16 PCW 0.682353 0.79661
17 PGW 0.639535 0.830189
18 D3D 0.639535 0.830189
19 P50 0.636364 0.924528
20 LIO 0.634146 0.779661
21 6PL 0.634146 0.779661
22 PC7 0.634146 0.779661
23 HGX 0.634146 0.779661
24 PLD 0.634146 0.779661
25 HGP 0.634146 0.779661
26 DR9 0.632184 0.830189
27 PGV 0.632184 0.830189
28 PEE 0.62963 0.962264
29 P6L 0.625 0.830189
30 OZ2 0.617977 0.830189
31 D21 0.609756 0.792453
32 CD4 0.604938 0.807692
33 DLP 0.602151 0.728814
34 P5S 0.595238 0.888889
35 PGT 0.590361 0.811321
36 XP5 0.590361 0.779661
37 LHG 0.590361 0.811321
38 B7N 0.576087 0.711864
39 PCK 0.55914 0.741935
40 F57 0.556962 0.773585
41 LPP 0.556962 0.773585
42 3PH 0.556962 0.773585
43 6PH 0.556962 0.773585
44 7PH 0.556962 0.773585
45 CN3 0.550562 0.807692
46 PX8 0.55 0.754717
47 7P9 0.55 0.773585
48 PX2 0.55 0.754717
49 CN6 0.545455 0.807692
50 PIE 0.536842 0.666667
51 L9R 0.531915 0.728814
52 POV 0.531915 0.728814
53 PII 0.52809 0.694915
54 PGK 0.521277 0.767857
55 P3A 0.520833 0.796296
56 PD7 0.5125 0.773585
57 PSF 0.511628 0.888889
58 3PE 0.511364 0.867925
59 44G 0.505882 0.811321
60 CDL 0.505747 0.735849
61 DGG 0.505155 0.767857
62 M7U 0.5 0.773585
63 8ND 0.5 0.716981
64 52N 0.5 0.683333
65 PIO 0.5 0.683333
66 PIF 0.5 0.683333
67 PIZ 0.494737 0.694915
68 42H 0.494624 0.830508
69 IP9 0.484211 0.694915
70 PC1 0.483516 0.711864
71 MC3 0.483516 0.711864
72 PCF 0.483516 0.711864
73 PDK 0.481132 0.819672
74 44E 0.469136 0.773585
75 S12 0.468085 0.888889
76 1AG 0.463415 0.603774
77 NKP 0.45977 0.792453
78 AGA 0.456522 0.777778
79 LAP 0.444444 0.813559
80 LP3 0.444444 0.813559
81 LPC 0.444444 0.813559
82 OPC 0.417476 0.783333
83 OLC 0.411765 0.603774
84 OLB 0.411765 0.603774
85 NKN 0.404762 0.773585
86 NKO 0.404762 0.773585
Ligand no: 2; Ligand: PGV; Similar ligands found: 105
No: Ligand ECFP6 Tc MDL keys Tc
1 DR9 1 1
2 PGV 1 1
3 D3D 0.985507 1
4 PGW 0.985507 1
5 OZ2 0.971831 1
6 P6L 0.957747 1
7 PGT 0.855072 0.977778
8 LHG 0.855072 0.977778
9 L9Q 0.766234 0.830189
10 LOP 0.766234 0.830189
11 6OU 0.766234 0.830189
12 CD4 0.75 0.933333
13 P50 0.75 0.826923
14 ZPE 0.746835 0.830189
15 44G 0.746479 0.977778
16 PCW 0.7375 0.706897
17 PGK 0.7375 0.916667
18 P3A 0.731707 0.956522
19 D21 0.72973 0.913043
20 DGG 0.710843 0.916667
21 B7N 0.678571 0.843137
22 CN3 0.675 0.933333
23 GP7 0.674419 0.830189
24 PSC 0.659091 0.706897
25 CN6 0.65 0.933333
26 8PE 0.649351 0.811321
27 PEF 0.649351 0.811321
28 PEH 0.649351 0.811321
29 PTY 0.649351 0.811321
30 PEV 0.649351 0.811321
31 P5S 0.64557 0.826923
32 9PE 0.641026 0.811321
33 PEE 0.641026 0.796296
34 PEK 0.632184 0.830189
35 PLD 0.625 0.689655
36 HGP 0.625 0.689655
37 PC7 0.625 0.689655
38 HGX 0.625 0.689655
39 6PL 0.625 0.689655
40 LIO 0.625 0.689655
41 PIE 0.613636 0.788462
42 7PH 0.608108 0.891304
43 F57 0.608108 0.891304
44 6PH 0.608108 0.891304
45 3PH 0.608108 0.891304
46 LPP 0.608108 0.891304
47 PX8 0.6 0.869565
48 7P9 0.6 0.891304
49 PX2 0.6 0.869565
50 S12 0.595238 0.826923
51 L9R 0.590909 0.666667
52 POV 0.590909 0.666667
53 EPH 0.589474 0.830189
54 OLB 0.589041 0.733333
55 MVC 0.589041 0.733333
56 OLC 0.589041 0.733333
57 AGA 0.585366 0.934783
58 XP5 0.580247 0.689655
59 PII 0.571429 0.823529
60 42H 0.569767 0.741379
61 CDL 0.567901 0.847826
62 PD7 0.56 0.891304
63 3TF 0.55914 0.618182
64 T7X 0.557895 0.843137
65 NKP 0.556962 0.913043
66 PSF 0.555556 0.826923
67 78N 0.554054 0.733333
68 78M 0.554054 0.733333
69 PIZ 0.550562 0.788462
70 PCK 0.549451 0.655738
71 1O2 0.548387 0.618182
72 TGL 0.542857 0.644444
73 M7U 0.542169 0.891304
74 PIF 0.54023 0.807692
75 IP9 0.539326 0.788462
76 PIO 0.522222 0.807692
77 52N 0.522222 0.807692
78 3PE 0.517647 0.735849
79 L2C 0.513514 0.688889
80 DDR 0.513514 0.688889
81 DGA 0.513514 0.688889
82 FAW 0.513514 0.688889
83 44E 0.513158 0.891304
84 DLP 0.510417 0.666667
85 1L2 0.504951 0.618182
86 MC3 0.488636 0.649123
87 PC1 0.488636 0.649123
88 PCF 0.488636 0.649123
89 PDK 0.485437 0.704918
90 GGD 0.481132 0.625
91 LBR 0.469136 0.638298
92 GYM 0.465753 0.711111
93 1QW 0.465753 0.711111
94 LAP 0.465116 0.724138
95 LP3 0.465116 0.724138
96 LPC 0.465116 0.724138
97 PGM 0.457831 0.913043
98 NKO 0.443038 0.891304
99 NKN 0.443038 0.891304
100 SQD 0.43299 0.630769
101 G2A 0.430556 0.652174
102 2JT 0.430556 0.652174
103 CN5 0.426966 0.913043
104 DGD 0.421569 0.607143
105 OPC 0.405941 0.694915
Ligand no: 3; Ligand: PSC; Similar ligands found: 86
No: Ligand ECFP6 Tc MDL keys Tc
1 PSC 1 1
2 PCW 0.884615 1
3 6PL 0.792208 0.981481
4 PLD 0.792208 0.981481
5 LIO 0.792208 0.981481
6 HGP 0.792208 0.981481
7 PC7 0.792208 0.981481
8 HGX 0.792208 0.981481
9 GP7 0.788235 0.79661
10 PEK 0.785714 0.79661
11 DLP 0.758621 0.925926
12 XP5 0.74359 0.981481
13 6OU 0.73494 0.79661
14 L9Q 0.73494 0.79661
15 LOP 0.73494 0.79661
16 ZPE 0.697674 0.79661
17 PCK 0.693182 0.929825
18 POV 0.681818 0.925926
19 L9R 0.681818 0.925926
20 EPH 0.673684 0.79661
21 D3D 0.666667 0.706897
22 PGW 0.666667 0.706897
23 DR9 0.659091 0.706897
24 PGV 0.659091 0.706897
25 P6L 0.651685 0.706897
26 PEV 0.646341 0.779661
27 PTY 0.646341 0.779661
28 PEF 0.646341 0.779661
29 8PE 0.646341 0.779661
30 PEH 0.646341 0.779661
31 P50 0.644444 0.762712
32 OZ2 0.644444 0.706897
33 42H 0.643678 0.964286
34 T7X 0.642105 0.66129
35 D21 0.638554 0.732143
36 9PE 0.638554 0.779661
37 PEE 0.619048 0.79661
38 B7N 0.602151 0.66129
39 PC1 0.597701 0.907407
40 MC3 0.597701 0.907407
41 PCF 0.597701 0.907407
42 CD4 0.595238 0.714286
43 LHG 0.581395 0.689655
44 PGT 0.581395 0.689655
45 P5S 0.568182 0.733333
46 PIE 0.5625 0.645161
47 LPC 0.55814 0.946429
48 LAP 0.55814 0.946429
49 LP3 0.55814 0.946429
50 3PH 0.548781 0.714286
51 6PH 0.548781 0.714286
52 LPP 0.548781 0.714286
53 F57 0.548781 0.714286
54 7PH 0.548781 0.714286
55 OPC 0.546392 0.981818
56 P3A 0.546392 0.706897
57 CN3 0.543478 0.714286
58 PX2 0.542169 0.759259
59 7P9 0.542169 0.714286
60 PX8 0.542169 0.759259
61 CN6 0.521739 0.714286
62 PII 0.521739 0.645161
63 PIZ 0.520833 0.645161
64 PGK 0.515464 0.655738
65 PIF 0.510638 0.634921
66 IP9 0.510417 0.645161
67 PIO 0.510417 0.634921
68 52N 0.510417 0.634921
69 PD7 0.506024 0.714286
70 3PE 0.505495 0.741379
71 44G 0.5 0.689655
72 DGG 0.5 0.655738
73 CDL 0.5 0.709091
74 M7U 0.494505 0.714286
75 PSF 0.488889 0.733333
76 3XU 0.485149 0.825397
77 43Y 0.482353 0.944444
78 PDK 0.477064 0.765625
79 44E 0.464286 0.714286
80 S12 0.463918 0.733333
81 SPU 0.462366 0.819672
82 PC5 0.461538 0.810345
83 8ND 0.45977 0.603448
84 3PC 0.457447 0.888889
85 NKP 0.455556 0.701754
86 AGA 0.452632 0.689655
Ligand no: 4; Ligand: TGL; Similar ligands found: 66
No: Ligand ECFP6 Tc MDL keys Tc
1 TGL 1 1
2 F57 0.745098 0.690476
3 LPP 0.745098 0.690476
4 6PH 0.745098 0.690476
5 7PH 0.745098 0.690476
6 3PH 0.745098 0.690476
7 8ND 0.745098 0.7
8 DDR 0.744681 0.875
9 DGA 0.744681 0.875
10 FAW 0.744681 0.875
11 L2C 0.744681 0.875
12 PX8 0.730769 0.707317
13 7P9 0.730769 0.690476
14 PX2 0.730769 0.707317
15 PD7 0.673077 0.690476
16 CD4 0.655172 0.690476
17 LBR 0.648148 0.794118
18 CDL 0.644068 0.725
19 M7U 0.633333 0.690476
20 LHG 0.633333 0.659091
21 PGT 0.633333 0.659091
22 D21 0.633333 0.674419
23 3PE 0.622951 0.617021
24 G2A 0.622222 0.764706
25 2JT 0.622222 0.764706
26 44E 0.603774 0.690476
27 PII 0.59375 0.604167
28 CN3 0.575758 0.690476
29 GYM 0.571429 0.742857
30 1QW 0.571429 0.742857
31 AGA 0.5625 0.659091
32 56S 0.555556 0.7
33 PGW 0.550725 0.644444
34 D3D 0.550725 0.644444
35 CN6 0.545455 0.690476
36 PGV 0.542857 0.644444
37 PIZ 0.542857 0.604167
38 DR9 0.542857 0.644444
39 PGK 0.535211 0.617021
40 P6L 0.535211 0.644444
41 IP9 0.528571 0.604167
42 OZ2 0.527778 0.644444
43 44G 0.516129 0.659091
44 P3A 0.513514 0.644444
45 PIE 0.513514 0.604167
46 DGG 0.513514 0.617021
47 DAO FTT 0.509091 0.8
48 CNS 0.5 0.724138
49 NKN 0.5 0.651163
50 1O2 0.5 0.622222
51 NKO 0.5 0.651163
52 CUY 0.5 0.724138
53 6UL 0.5 0.724138
54 DGD 0.493506 0.608696
55 3TF 0.493506 0.622222
56 PVC 0.482759 0.710526
57 OLC 0.482759 0.722222
58 OLB 0.482759 0.722222
59 T80 0.472727 0.806452
60 MVC 0.457627 0.722222
61 1L2 0.452381 0.622222
62 PGM 0.444444 0.636364
63 78N 0.440678 0.722222
64 78M 0.440678 0.722222
65 NKP 0.430769 0.636364
66 PJZ 0.42029 0.9
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2DYS; Ligand: PEK; Similar sites found with APoc: 33
This union binding pocket(no: 1) in the query (biounit: 2dys.bio1) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 1UO5 PIH None
2 2WOR 2AN 7
3 4O4Z N2O 8.16327
4 6CS9 PIO 9.7561
5 1SBR VIB 10.9589
6 4GAH 0ET 12.5
7 4RYV ZEA 13.0435
8 6BK3 B2S 14.1176
9 5C1M OLC 15.2174
10 4DE3 DN8 15.2941
11 3FJG 3PG 16.3265
12 1XZ3 ICF 16.4706
13 2UW1 GVM 16.9492
14 1DTL BEP 17.3913
15 3O01 DXC 17.4312
16 4F4S EFO 18.4211
17 4OEV OXL 18.6441
18 4ZJS 4P0 19.1489
19 1U6R IOM 20.4082
20 5XHA FRU 20.5479
21 6BR8 6OU 23.7288
22 1Z5U CMP 23.913
23 5W7B MYR 25.4237
24 2BP1 FLC 31.9149
25 2C91 TLA 31.9149
26 5CX8 TG6 32.6087
27 1VRP IOM 33.6735
28 43CA NPO 34.0426
29 5M36 9SZ 34.2105
30 4OGQ 7PH 38.2353
31 4OGQ UMQ 38.2353
32 5LX9 OLB 39.2857
33 3S6X SIA GAL BGC 44.0678
Pocket No.: 2; Query (leader) PDB : 2DYS; Ligand: TGL; Similar sites found with APoc: 132
This union binding pocket(no: 2) in the query (biounit: 2dys.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 1UO5 PIH None
2 1UO4 PIH None
3 4WG0 CHD None
4 4RJD TFP 6.06061
5 2WOR 2AN 7
6 5UGW GSH 7.05882
7 5NNT DPV 8.10811
8 4O4Z N2O 8.16327
9 3SE5 ANP 8.69565
10 5KAU RHQ 8.92857
11 5FS0 5JC 9.58904
12 1MID LAP 9.89011
13 3GF2 SAL 10.2041
14 3R9V DXC 10.8392
15 4I90 CHT 10.8844
16 2VWA PTY 10.8911
17 5L7G LYS SER LEU LEU GLN GLN LEU LEU THR GLU 10.9589
18 3KP6 SAL 11.0092
19 3F8C HT1 11.7647
20 1W3R PYR 11.8644
21 4V2O CLQ 12.1951
22 5OSW DIU 12.2449
23 3G58 988 12.3288
24 1NU4 MLA 12.3711
25 4RHP PEF 12.5
26 4DOL PLM 12.766
27 2GBB CIT 13.0435
28 3T3Z 9PL 13.6564
29 4HBM 0Y7 13.6986
30 6H8S FSZ 14.1176
31 5DQW ADP 14.218
32 4UCC ZKW 14.2857
33 5KAX RHQ 14.2857
34 2RH1 CLR 14.6789
35 3NJQ NJQ 14.8936
36 3KO0 TFP 14.8936
37 5CX6 CDP 15.0685
38 2OZ5 7XY 15.0685
39 5C1M OLC 15.2174
40 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 15.2174
41 5C1M CLR 15.2174
42 3G08 FEE 15.2542
43 4RW3 TDA 15.2542
44 2Z9I GLY ALA THR VAL 15.2542
45 4BTB PRO PRO PRO PRO PRO PRO PRO PRO PRO 15.3061
46 5Y02 HBX 15.8879
47 5TVI O8N 16.4384
48 1XZ3 ICF 16.4706
49 4F06 PHB 16.5138
50 5C9J DAO 16.9492
51 2UW1 GVM 16.9492
52 2W9S TOP 16.9492
53 3RV5 DXC 17.3913
54 3O01 DXC 17.4312
55 4IA6 EIC 17.8571
56 6CS8 F9Y 17.8571
57 6GMN F4E 17.9012
58 3ZQE DXC 18.3486
59 5CHR 4NC 18.3673
60 3NB0 G6P 18.3673
61 4F4S EFO 18.4211
62 3W54 RNB 18.6441
63 1HBK COA 19.1489
64 4V3I ASP LEU THR ARG PRO 19.1489
65 3KXC PLM 19.1489
66 3E70 GDP 19.1781
67 5U97 PIT 19.1781
68 1XMY ROL 19.2661
69 4MRP GSH 19.6429
70 6B21 C9V 19.6429
71 5IJJ I6P 20.1835
72 3B9Z CO2 20.339
73 6CGN DA 20.5479
74 2BHW NEX 21.1765
75 3TL1 JRO 21.1765
76 2GWH PCI 21.2766
77 3AQT RCO 21.2766
78 5OCA 9QZ 21.4286
79 1I0B PEL 21.4286
80 3SDV 911 21.7391
81 5OLK DTP 21.9178
82 2BHZ MAL 21.9178
83 5V3Y 5V8 21.9178
84 2Q8G AZX 22.0339
85 4WGF HX2 22.3529
86 5V4R MGT 22.8395
87 5HCN DAO 22.9358
88 2HZL PYR 22.9358
89 4MGA 27L 23.2143
90 4TV1 36M 23.2143
91 3UUA 0CZ 23.2143
92 3N7S 3N7 23.4043
93 1Q7E MET 23.4043
94 5MWE TCE 23.4043
95 3ROE THM 23.4043
96 5AZC PGT 23.7288
97 6BR8 PGV 23.7288
98 3AI3 SOE 23.8532
99 4Q86 AMP 24.6575
100 1GNI OLA 24.6575
101 4ZGM 32M 24.7059
102 1X8D RNS 25
103 5W7B MYR 25.4237
104 6CB2 OLC 25.8824
105 1N9L FMN 26.087
106 2BCG GER 26.5306
107 1R6N 434 26.7857
108 5M37 9SZ 27.1186
109 1ZPD CIT 27.6596
110 3FS1 ALA ALA LEU ALA ALA LEU LEU ALA ALA 27.8912
111 3SQP 3J8 28.8136
112 1XVB 3BR 28.8136
113 3TDC 0EU 29.4118
114 5ET3 60C 30
115 5VRH OLB 31.9149
116 2BP1 FLC 31.9149
117 4OB6 S2T 32.1429
118 5IM3 DTP 32.2034
119 3P9T TCL 32.8767
120 6BVK EAV 33.8983
121 6BVM EBV 33.8983
122 6BVI EC4 33.8983
123 6BVJ EAS 33.8983
124 6BVL EBY 33.8983
125 5M36 9SZ 34.2105
126 2HW2 RFP 35.5932
127 3HP9 CF1 36.1702
128 4OGQ 7PH 38.2353
129 4OGQ 1O2 38.2353
130 5LX9 OLB 39.2857
131 1T0S BML 39.2857
132 5LWY OLB 39.2857
Pocket No.: 3; Query (leader) PDB : 2DYS; Ligand: PGV; Similar sites found with APoc: 152
This union binding pocket(no: 3) in the query (biounit: 2dys.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 4WG0 CHD None
2 2WOR 2AN 7
3 5UGW GSH 7.05882
4 4O4Z N2O 8.16327
5 1AUA BOG 8.51064
6 5KAU RHQ 8.92857
7 1L6O SER LEU LYS LEU MET THR THR VAL 9.47368
8 2WL9 MBD 10.1695
9 1UUY PPI 10.5882
10 4RKK GLC GLC GLC GLC GLC GLC 10.8696
11 2VWA PTY 10.8911
12 3B5J 12D 10.9589
13 1SBR VIB 10.9589
14 3KP6 SAL 11.0092
15 3F8C HT1 11.7647
16 1RL4 BL5 11.7647
17 4V2O CLQ 12.1951
18 2O1O RIS 12.2449
19 3G58 988 12.3288
20 1NU4 MLA 12.3711
21 4RHP PEF 12.5
22 5URY PAM 12.7753
23 1P72 THM 13.0435
24 2GBB CIT 13.0435
25 5UC9 MYR 13.6054
26 3L1N PLM 13.7615
27 3W9F I3P 14.2857
28 4UCC ZKW 14.2857
29 5KAX RHQ 14.2857
30 5B0I BOG 14.2857
31 2O1V ADP 14.2857
32 1ZED PNP 14.6789
33 3NJQ NJQ 14.8936
34 2OZ5 7XY 15.0685
35 5C1M OLC 15.2174
36 5C1M CLR 15.2174
37 5X80 SAL 15.2174
38 5C1M 4VO 15.2174
39 4RW3 TDA 15.2542
40 4DDY DN6 15.2941
41 5DCH 1YO 15.2941
42 4Q9N 0WE 15.6463
43 5Y02 HBX 15.8879
44 4GBD MCF 16.0714
45 1M1B SPV 16.0714
46 5TVI O8N 16.4384
47 5TVI MYR 16.4384
48 3LGG CFE 16.5138
49 5C9J DAO 16.9492
50 1ZGA HMK 17.3469
51 5X3R 7Y3 17.3469
52 4U00 ADP 17.3913
53 1DTL BEP 17.3913
54 3THR C2F 17.3913
55 3O01 DXC 17.4312
56 5KD8 TNR 17.6471
57 3ZQE DXC 18.3486
58 2YLD CMO 18.3486
59 5CHR 4NC 18.3673
60 3R9C ECL 18.3673
61 4F4S EFO 18.4211
62 2HIM ASN 18.6441
63 1XPJ TLA 19.1489
64 1HBK COA 19.1489
65 4V3I ASP LEU THR ARG PRO 19.1489
66 1YQT ADP 19.1489
67 1TV5 N8E 19.1781
68 3E70 GDP 19.1781
69 5U97 PIT 19.1781
70 1EU1 GLC 19.1781
71 1XMY ROL 19.2661
72 4G86 BNT 19.5652
73 5XJ7 87O 20
74 1G6H ADP 20
75 5GLN XYP XYP XYP 20.339
76 5DNC ASN 20.339
77 4R8L ASP 20.339
78 4LH7 NMN 20.5479
79 5FJJ MAN 20.5479
80 2Q1H AS4 20.7048
81 2BHW NEX 21.1765
82 5GWE GWM 21.1765
83 2GWH PCI 21.2766
84 3AQT RCO 21.2766
85 5OCA 9QZ 21.4286
86 2OKL BB2 21.4286
87 4D3S BOG 21.7391
88 5V3Y 5V8 21.9178
89 5OLK DTP 21.9178
90 5GQI CTP 22.0183
91 5HZ9 5M8 22.0339
92 4WGF HX2 22.3529
93 5I8F ML1 22.449
94 5V4R MGT 22.8395
95 4TV1 36M 23.2143
96 4MGA 27L 23.2143
97 5EE7 5MV 23.2143
98 4MG9 27K 23.2143
99 4MGD 27N 23.2143
100 3UUA 0CZ 23.2143
101 3N7S 3N7 23.4043
102 5MWE TCE 23.4043
103 3GKJ HC3 23.4043
104 4KVL PLM 23.5294
105 6BR8 PGV 23.7288
106 5AZC PGT 23.7288
107 6BR9 6OU 23.7288
108 6BR9 PGV 23.7288
109 3TKY N7I 23.913
110 2FKW RG1 24.3902
111 4COL DTP 24.7059
112 4ZGM 32M 24.7059
113 1XQP 8HG 24.7706
114 5W7B MYR 25.4237
115 2VDY HCY 25.5319
116 6CB2 OLC 25.8824
117 2BCG GER 26.5306
118 1R6N 434 26.7857
119 5B4B LP5 26.7857
120 4UBS DIF 27.0588
121 5M37 9SZ 27.1186
122 2XRH NIO 27.6596
123 4WBD CIT 27.6596
124 1ZPD CIT 27.6596
125 3FS1 ALA ALA LEU ALA ALA LEU LEU ALA ALA 27.8912
126 4DO1 ANN 28.2609
127 1Q1Y BB2 28.7671
128 3SQP 3J8 28.8136
129 1XVB 3BR 28.8136
130 2HHP FLC 29.7872
131 5ET3 60C 30
132 5N26 CPT 30.2752
133 5VRH OLB 31.9149
134 5IM3 DTP 32.2034
135 1KI6 AHU 32.2034
136 1U3G ADP 32.6087
137 3P9T TCL 32.8767
138 4URX FK1 33.8983
139 6D59 FVJ 33.8983
140 2IBZ UQ6 34.0426
141 5M36 9SZ 34.2105
142 5W6Y TRP 35.5932
143 3HP9 CF1 36.1702
144 5FPN KYD 36.7347
145 4OGQ 7PH 38.2353
146 4OGQ 1O2 38.2353
147 4OGQ 2WD 38.2353
148 5LX9 OLB 39.2857
149 1T0S BML 39.2857
150 5LWY OLB 39.2857
151 5LWY OLA 39.2857
152 5OM2 DXT 40.678
Pocket No.: 4; Query (leader) PDB : 2DYS; Ligand: PGV; Similar sites found with APoc: 82
This union binding pocket(no: 4) in the query (biounit: 2dys.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
1 5OHJ 9VE 8.81226
2 3GWT 066 9.17431
3 2XSU PIE 10.7143
4 3QMK SGN IDS SGN IDS 10.7477
5 1LEK GLU GLN TYR LYS PHE TYR SER VAL 11.5646
6 2OBD PCW 12.2449
7 1XON PIL 12.3288
8 1ZT1 PHE GLU ALA ASN GLY ASN LEU ILE 12.766
9 3G4G D71 12.7753
10 3ET1 ET1 13.5593
11 4NKW PLO 14.2857
12 3E85 BSU 14.557
13 2RH1 CLR 14.6789
14 2RH1 CAU 14.6789
15 2VAT COA 14.8936
16 2C9E PID 15.2174
17 3G08 FEE 15.2542
18 1MHC FME TYR PHE ILE ASN ILE LEU THR LEU 15.2941
19 5K52 OCD 17.0213
20 1FCH TYR GLN SER LYS LEU 17.4312
21 4XIZ LPP 17.6871
22 3KRO IPE 18.6441
23 3KRO DST 18.6441
24 3KXC PLM 19.1489
25 1XMU ROF 19.2661
26 1XM4 PIL 19.2661
27 3L9R L9R 19.3878
28 4RFM 3P6 19.5652
29 6BMS PLM 19.5652
30 2EI4 22B 19.5652
31 1LN1 DLP 19.6429
32 6B21 C9V 19.6429
33 3QUZ QUV 20
34 2XXP DSL 20.5479
35 4V24 GYR 21.2766
36 4CL6 7SB 21.2766
37 3SCM LGN 21.7391
38 3HUJ AGH 21.7391
39 4C9G CXT 21.7391
40 1UBY DMA 21.7391
41 3Q8G PEE 22.0339
42 5J6A P46 22.0339
43 2X5W K2B 22.0339
44 4F7E 0SH 22.9358
45 5HCN DAO 22.9358
46 1EWF PC1 23.2143
47 3RUG DB6 23.2877
48 4IGH FMN 23.2877
49 4IGH ORO 23.2877
50 4IGH 1EA 23.2877
51 1BII ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 23.4043
52 5G57 6M5 23.4043
53 4CVZ TYR GLU LEU ASP GLU LYS PHE ASP ARG LEU 23.5294
54 6BR8 6OU 23.7288
55 4DOO DAO 23.7288
56 1UVC STE 24.1758
57 1GNI OLA 24.6575
58 2XFH CL6 24.7059
59 5AAV GW5 25
60 5X0J SEP 25.5102
61 5X0J AMP 25.5102
62 2Z7I 742 25.8503
63 4WQ2 3SU 26.0274
64 2J8C U10 26.7857
65 2J8C SPO 26.7857
66 2QJY UQ2 27.0588
67 3G5N PB2 27.5229
68 5NWI TYR PHE SER SEP ASN 27.5229
69 4MNS 2AX 28.8136
70 6F68 4EU 29.7872
71 6F68 GSH 29.7872
72 3T6E UQ9 30.3571
73 3T6E MQ9 30.3571
74 1DMH LIO 30.3571
75 2RGO FAD 30.5085
76 3TJH SER PRO LEU ASP SER LEU TRP TRP ILE 30.5882
77 5ZBK AMP 30.6122
78 5UWA 8ND 31.5068
79 5OLZ T4E 32.1429
80 6BJ3 ILE PRO LEU THR GLU GLU ALA GLU LEU 35.5932
81 4V1T ADP 35.7143
82 1P1M MET 36.1702
Pocket No.: 5; Query (leader) PDB : 2DYS; Ligand: TGL; Similar sites found with APoc: 58
This union binding pocket(no: 5) in the query (biounit: 2dys.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 1TIQ COA 5.50459
2 1L0I PSR 6.41026
3 3FXU TSU 7.33945
4 3NFD COA 9.15033
5 1UUY PPI 10.5882
6 1SBR VIB 10.9589
7 5TWO 7MV 11.1111
8 6EVN PRO PRO GLY PRO ALA GLY PRO PRO GLY 11.7647
9 6FBA D48 11.7647
10 6AP8 BNY 11.8644
11 4LWU 20U 13.0435
12 3SP6 IL2 13.5593
13 1RV1 IMZ 13.6986
14 2Q4X HMH 14.1176
15 1ZED PNP 14.6789
16 5X13 HC4 15.0685
17 4RW3 PLM 15.2542
18 5Y02 MXN 15.8879
19 3X01 AMP 16.0714
20 2GJP MAL 16.3265
21 5KOD IAC 16.3265
22 1RTW MP5 16.4706
23 1DTL BEP 17.3913
24 2PRG BRL 18.1818
25 2CIX CEJ 18.6441
26 1HBK MYR 19.1489
27 1TV5 N8E 19.1781
28 1MT1 AG2 19.2308
29 5EY0 GTP 19.2661
30 2W3L DRO 19.4444
31 4LHD GLY 19.5652
32 2R2N KYN 19.6429
33 5XJ7 87O 20
34 2J4D MHF 20.339
35 6G47 SIA 20.339
36 3W5N RAM 21.1765
37 1PIG GLC GLC 21.2766
38 3LTW HLZ 21.2766
39 3ER9 3AT 21.2766
40 1FX8 BOG 21.4286
41 1J78 VDY 22.0339
42 5I8F ML1 22.449
43 1NF8 BOG 23.1884
44 3B6C SDN 23.2143
45 2QZO KN1 23.2143
46 5E58 CPZ 23.4043
47 4XCP PLM 23.4043
48 6BR8 6OU 23.7288
49 4QO5 NAG 25
50 3KPE TM3 25.641
51 4I9B 1KA 27.3973
52 5FQK 6NT 28.2609
53 3WFD AXO 29.7872
54 5X5M 7YU 30.4348
55 5VRH PLM 31.9149
56 5GQX GLC GLC GLC GLC 32.8767
57 4YSX E23 35.1064
58 2QES ADE 42.8571
Pocket No.: 6; Query (leader) PDB : 2DYS; Ligand: TGL; Similar sites found with APoc: 6
This union binding pocket(no: 6) in the query (biounit: 2dys.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
1 1RL4 BL5 11.7647
2 5UC9 MYR 13.6054
3 5M8T 0TR 16.0714
4 3G3N TC8 26.087
5 5N26 CPT 30.2752
6 5CX8 TG6 32.6087
Pocket No.: 7; Query (leader) PDB : 2DYS; Ligand: PEK; Similar sites found with APoc: 68
This union binding pocket(no: 7) in the query (biounit: 2dys.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 4WG0 CHD None
2 4RJD TFP 6.06061
3 5UGW GSH 7.05882
4 5NNT DPV 8.10811
5 3R9V DXC 10.8392
6 2VWA PTY 10.8911
7 3KP6 SAL 11.0092
8 5OSW DIU 12.2449
9 3G58 988 12.3288
10 1NU4 MLA 12.3711
11 5UC9 MYR 13.6054
12 4UCC ZKW 14.2857
13 1ZED PNP 14.6789
14 3KO0 TFP 14.8936
15 4V1F BQ1 15.1163
16 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 15.2174
17 5C1M CLR 15.2174
18 4RW3 TDA 15.2542
19 5DCH 1YO 15.2941
20 4BTB PRO PRO PRO PRO PRO PRO PRO PRO PRO 15.3061
21 5TVI O8N 16.4384
22 5C9J DAO 16.9492
23 3RV5 DXC 17.3913
24 3SFI 3SF 17.8571
25 6GMN F4E 17.9012
26 5CHR 4NC 18.3673
27 2CIX CEJ 18.6441
28 4V3I ASP LEU THR ARG PRO 19.1489
29 3E70 GDP 19.1781
30 1XMY ROL 19.2661
31 1XM4 PIL 19.2661
32 5XJ7 87O 20
33 3HYW DCQ 20.4082
34 3W5N RAM 21.1765
35 2BHW NEX 21.1765
36 2GWH PCI 21.2766
37 3AQT RCO 21.2766
38 5OCA 9QZ 21.4286
39 1I0B PEL 21.4286
40 1GEG GLC 21.7391
41 5OLK DTP 21.9178
42 4WGF HX2 22.3529
43 5V4R MGT 22.8395
44 1JGS SAL 23.2143
45 4TV1 36M 23.2143
46 3N7S 3N7 23.4043
47 5EK3 5PK 23.4043
48 5MWE TCE 23.4043
49 1Q7E MET 23.4043
50 5AZC PGT 23.7288
51 6BR8 PGV 23.7288
52 1WMA AB3 23.913
53 4ZGM 32M 24.7059
54 1XQP 8HG 24.7706
55 6CB2 OLC 25.8824
56 1R6N 434 26.7857
57 5M37 9SZ 27.1186
58 3EYK EYK 27.8912
59 3FS1 ALA ALA LEU ALA ALA LEU LEU ALA ALA 27.8912
60 3SQP 3J8 28.8136
61 3TDC 0EU 29.4118
62 5N26 CPT 30.2752
63 5IM3 DTP 32.2034
64 5LXT GDP 36.7347
65 5LXT 7AK 36.7347
66 4OGQ 2WD 38.2353
67 4OGQ 1O2 38.2353
68 5LWY OLB 39.2857
Pocket No.: 8; Query (leader) PDB : 2DYS; Ligand: PEK; Similar sites found with APoc: 15
This union binding pocket(no: 8) in the query (biounit: 2dys.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 1UUY PPI 10.5882
2 3F8C HT1 11.7647
3 4V2O CLQ 12.1951
4 3KYQ DPV 13.0653
5 2X1E X1E 13.6054
6 3L1N PLM 13.7615
7 6BMM OLB 16.0714
8 3OBT SLB 16.0714
9 6B21 C9V 19.6429
10 1TO9 HMH 20.5479
11 5V3Y 5V8 21.9178
12 1NF8 BOG 23.1884
13 5ET3 60C 30
14 5VRH OLB 31.9149
15 5FPN KYD 36.7347
Pocket No.: 9; Query (leader) PDB : 2DYS; Ligand: PEK; Similar sites found with APoc: 4
This union binding pocket(no: 9) in the query (biounit: 2dys.bio1) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 2CBO TH2 15.2941
2 5JNW 6LJ 19.2661
3 3TY3 GGG 21.2766
4 5CX8 RP3 32.6087
Pocket No.: 10; Query (leader) PDB : 2DYS; Ligand: PGV; Similar sites found with APoc: 4
This union binding pocket(no: 10) in the query (biounit: 2dys.bio1) has 14 residues
No: Leader PDB Ligand Sequence Similarity
1 5WL1 CUY 16.1616
2 3WCA FPS 17.8571
3 2BHW XAT 21.1765
4 1XVB BHL 28.8136
Pocket No.: 11; Query (leader) PDB : 2DYS; Ligand: PGV; Similar sites found with APoc: 20
This union binding pocket(no: 11) in the query (biounit: 2dys.bio1) has 35 residues
No: Leader PDB Ligand Sequence Similarity
1 3SE5 ANP 8.69565
2 3R9V DXC 10.8392
3 4DOL PLM 12.766
4 2VOH CIT 14.1176
5 5Y02 MXN 15.8879
6 2AK3 AMP 16.9492
7 4L80 OXL 17.0213
8 5MTE BB2 18.3673
9 6FS0 E4W 21.4286
10 2HZL PYR 22.9358
11 5DXG EST 23.2143
12 4MGB XDH 23.2143
13 1X8D RNS 25
14 3IP8 B85 28.2609
15 5UV1 0FV 29.3578
16 3TDC 0EU 29.4118
17 4OB6 S2T 32.1429
18 6C1R EFD 32.6087
19 3RMK BML 33.9286
20 2YJD YJD 41.3043
Pocket No.: 12; Query (leader) PDB : 2DYS; Ligand: PGV; Similar sites found with APoc: 47
This union binding pocket(no: 12) in the query (biounit: 2dys.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 1UO5 PIH None
2 5N1X 8HH 5.9322
3 4RJD TFP 6.06061
4 3ZPG 5GP 7.33945
5 3GF2 SAL 10.2041
6 6AP8 BNY 11.8644
7 5OSW DIU 12.2449
8 3CHT 4NB 12.5
9 3KIV ACA 12.6582
10 3KYQ DPV 13.0653
11 3WUR O4B 14.0351
12 2V5E SCR 14.1176
13 3KO0 TFP 14.8936
14 2X1L MET 15.0685
15 2XQO CTR 15.0685
16 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 15.2174
17 5V03 658 15.2542
18 5CSD ACD 17.3469
19 4E70 N7I 17.3469
20 1M48 FRG 17.3913
21 3RV5 DXC 17.3913
22 1UCD U5P 17.6471
23 5AEW BNL 17.8082
24 3SFI 3SF 17.8571
25 3NB0 G6P 18.3673
26 2QQD AG2 18.8679
27 1TV5 A26 19.1781
28 1MT1 AG2 19.2308
29 4MRP GSH 19.6429
30 5A86 D7E 21.0884
31 3W5N RAM 21.1765
32 2WG9 OCA 21.4286
33 4DW4 U5P 22.0183
34 1NF8 BOG 23.1884
35 1JGS SAL 23.2143
36 1IYB 5GP 23.4043
37 4Q0A 4OA 23.7288
38 2NV2 GLN 26.087
39 4DR9 BB2 27.6596
40 3WFD AXO 29.7872
41 1XX4 BAM 29.7872
42 2E9L PLM 32.1429
43 5CX8 RP3 32.6087
44 3WYJ H78 36.1702
45 4OGQ UMQ 38.2353
46 5OPM DTP 38.9831
47 2D5X L35 45.6522
Pocket No.: 13; Query (leader) PDB : 2DYS; Ligand: PSC; Similar sites found with APoc: 77
This union binding pocket(no: 13) in the query (biounit: 2dys.bio1) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 1UO5 PIH None
2 4WG0 CHD None
3 4O4Z N2O 8.16327
4 5KAU RHQ 8.92857
5 1MID LAP 9.89011
6 3R9V DXC 10.8392
7 4I90 CHT 10.8844
8 2VWA PTY 10.8911
9 3KP6 SAL 11.0092
10 2WQ4 SFU 11.5385
11 5OSW DIU 12.2449
12 1RV1 IMZ 13.6986
13 1E4I NFG 14.1176
14 3KAL HGS 14.1176
15 2V5E SCR 14.1176
16 3NJQ NJQ 14.8936
17 3KO0 TFP 14.8936
18 5C1M CLR 15.2174
19 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG 15.2174
20 4RW3 TDA 15.2542
21 4DDY DN6 15.2941
22 1F6D UDP 16.0714
23 5XNA SHV 16.3265
24 5TVI MYR 16.4384
25 5C9J DAO 16.9492
26 3RV5 DXC 17.3913
27 3O01 DXC 17.4312
28 3GXO MQA 17.8571
29 5CHR 4NC 18.3673
30 3NB0 G6P 18.3673
31 2CIX CEJ 18.6441
32 3W54 RNB 18.6441
33 5LXB 7A9 19.1489
34 5NM7 GLY 19.1781
35 1TV5 N8E 19.1781
36 2JC9 ADN 19.5652
37 4MRP GSH 19.6429
38 6B21 C9V 19.6429
39 5XJ7 87O 20
40 1DLL LAT 20
41 3TL1 JRO 21.1765
42 3AQT RCO 21.2766
43 5OCA 9QZ 21.4286
44 5OLK DTP 21.9178
45 1J78 OLA 22.0339
46 4K7O EKZ 22.9358
47 2HZL PYR 22.9358
48 4MGA 27L 23.2143
49 1Q7E MET 23.4043
50 4XCP PLM 23.4043
51 5AZC PGT 23.7288
52 6BR8 PGV 23.7288
53 1OFZ FUC 23.913
54 1XQP 8HG 24.7706
55 5W7B MYR 25.4237
56 2BCG GER 26.5306
57 1R6N 434 26.7857
58 2BP1 FLC 31.9149
59 3ZXE PGZ 31.9149
60 5IM3 DTP 32.2034
61 4URX FK1 33.8983
62 6BVM EBV 33.8983
63 6BVK EAV 33.8983
64 6BVJ EAS 33.8983
65 6BVL EBY 33.8983
66 6BVI EC4 33.8983
67 6D56 FVM 33.8983
68 6D5G FVD 33.8983
69 6D55 FWA 33.8983
70 5M36 9SZ 34.2105
71 3HP9 CF1 36.1702
72 4OGQ 2WD 38.2353
73 4OGQ 7PH 38.2353
74 4OGQ 1O2 38.2353
75 5OPM DTP 38.9831
76 5LX9 OLB 39.2857
77 5LWY OLB 39.2857
Pocket No.: 14; Query (leader) PDB : 2DYS; Ligand: PEK; Similar sites found with APoc: 6
This union binding pocket(no: 14) in the query (biounit: 2dys.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 3GF2 SAL 10.2041
2 5IUY BOG 11.7647
3 5MTE BB2 18.3673
4 6A0S NDP 21.2766
5 2BCG GER 26.5306
6 3HP9 CF1 36.1702
Pocket No.: 15; Query (leader) PDB : 2DYS; Ligand: PEK; Similar sites found with APoc: 2
This union binding pocket(no: 15) in the query (biounit: 2dys.bio1) has 23 residues
No: Leader PDB Ligand Sequence Similarity
1 2RH1 CLR 14.6789
2 5N17 8FK 23.5294
Pocket No.: 16; Query (leader) PDB : 2DYS; Ligand: TGL; Similar sites found with APoc: 9
This union binding pocket(no: 16) in the query (biounit: 2dys.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 6CS9 PIO 9.7561
2 3TW1 AHN 15.2941
3 5TVI MYR 16.4384
4 4YGF AZM 17.0213
5 4IBF 1D5 20.339
6 3HYW DCQ 20.4082
7 5E70 RCD 23.4043
8 2OWZ CIT 28.2609
9 4OGQ 2WM 38.2353
Pocket No.: 17; Query (leader) PDB : 2DYS; Ligand: PSC; Similar sites found with APoc: 6
This union binding pocket(no: 17) in the query (biounit: 2dys.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 5N8V KZZ 2.89855
2 1AUA BOG 8.51064
3 4GN8 ASO 12.766
4 1ZED PNP 14.6789
5 5EEH P9P 21.7391
6 4TV1 36M 23.2143
Pocket No.: 18; Query (leader) PDB : 2DYS; Ligand: PGV; Similar sites found with APoc: 5
This union binding pocket(no: 18) in the query (biounit: 2dys.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
1 1L0I PSR 6.41026
2 5CX6 CDP 15.0685
3 4V1F BQ1 15.1163
4 5XNA SHV 16.3265
5 6GL0 GLC BGC BGC 21.1765
Pocket No.: 19; Query (leader) PDB : 2DYS; Ligand: TGL; Similar sites found with APoc: 39
This union binding pocket(no: 19) in the query (biounit: 2dys.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 2UXI G50 8.47458
2 1AUA BOG 8.51064
3 1DEK DGP 10.5882
4 3D78 NBB 10.7143
5 5FH7 5XL 10.9589
6 1LEK GLU GLN TYR LYS PHE TYR SER VAL 11.5646
7 2OBD PCW 12.2449
8 3KYQ DPV 13.0653
9 3KDU NKS 13.5593
10 5N7O 69Y 13.6986
11 3L1N PLM 13.7615
12 1E4I NFG 14.1176
13 2V5E SCR 14.1176
14 1ZEI CRS 15.0943
15 5TIV A3P 15.4185
16 3I0O SMI 16.0714
17 2D5Z L35 16.4384
18 2YLD CMO 18.3486
19 4LY9 1YY 19.1489
20 4LY9 S6P 19.1489
21 4U0S ADP 19.1781
22 3H0A D30 20.1835
23 2XXP DSL 20.5479
24 3G4Q MCH 21.2766
25 5EEH P9P 21.7391
26 3SCM LGN 21.7391
27 1OFZ FUL 23.913
28 5O42 BGC 23.913
29 5O42 9JW 23.913
30 5O42 NAD 23.913
31 4COL DTP 24.7059
32 3LN0 52B 24.7706
33 5AAV GW5 25
34 5B4B LP5 26.7857
35 4MA7 P2Z 28.8136
36 1GVE CIT 31.9149
37 2A1L PCW 32.1429
38 3WYJ H78 36.1702
39 4OGQ 2WD 38.2353
Pocket No.: 20; Query (leader) PDB : 2DYS; Ligand: PGV; Similar sites found with APoc: 32
This union binding pocket(no: 20) in the query (biounit: 2dys.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 1UO4 PIH None
2 3WJO IPE 10.5882
3 5SVV FMN 12.766
4 4PJT 2YQ 12.766
5 2EFJ 37T 13.5593
6 6CGZ HL6 13.6986
7 1MJT NAD 15.2174
8 4XU6 TDA 15.7143
9 5A8E XTK 16.4706
10 2W9S TOP 16.9492
11 1N5S ADL 17.8571
12 3W54 RNB 18.6441
13 2PSJ CEI 20
14 1N1D C2G 21.1765
15 3G4Q MCH 21.2766
16 1T27 PCW 23.2143
17 3PVT 3HC 23.2143
18 2QLX RM4 23.7288
19 5O42 BGC 23.913
20 5O42 9JW 23.913
21 5O42 NAD 23.913
22 4QO5 NAG 25
23 2E3N 6CM 25
24 2ZCQ B65 27.3973
25 6GKV F2W 28.8136
26 5GNX BGC 29.7872
27 1TPY 16A 30.3571
28 1PCA CIT 31.9149
29 2BP1 FLC 31.9149
30 1LBT T80 31.9149
31 2A1L PCW 32.1429
32 4WZ8 3W7 35.5932
Pocket No.: 21; Query (leader) PDB : 2DYS; Ligand: TGL; Similar sites found with APoc: 13
This union binding pocket(no: 21) in the query (biounit: 2dys.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 2I74 MAN MAN MAN MAN 14.2857
2 4XU6 TDA 15.7143
3 4D52 GXL 16.9492
4 4D52 GIV 16.9492
5 3A8H TAY 19.5652
6 4MG9 27K 23.2143
7 5EK3 5PK 23.4043
8 1XQP 8HG 24.7706
9 2Z7I 742 25.8503
10 5ZKC 3C0 26.087
11 1EM6 CP4 27.1186
12 3VRV YSD 27.6596
13 5EO8 TFU 33.9286
Pocket No.: 22; Query (leader) PDB : 2DYS; Ligand: PGV; Similar sites found with APoc: 4
This union binding pocket(no: 22) in the query (biounit: 2dys.bio1) has 19 residues
No: Leader PDB Ligand