Receptor
PDB id Resolution Class Description Source Keywords
2EI4 2.1 Å NON-ENZYME: OTHER TRIMERIC COMPLEX OF ARCHAERHODOPSIN-2 HALOBACTERIUM SP. AUS-2 MEMBRANE PROTEIN RETINAL BACTERIORUBERIN PROTON PUMP TRAPROTEIN
Ref.: STRUCTURAL ROLE OF BACTERIORUBERIN IN THE TRIMERIC OF ARCHAERHODOPSIN-2 J.MOL.BIOL. V. 375 1267 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
22B A:270;
Valid;
none;
submit data
741.136 C50 H76 O4 CC(=C...
GLC L2P A:281;
Invalid;
none;
submit data n/a n/a n/a n/a
RET A:260;
Invalid;
none;
submit data
284.436 C20 H28 O CC1=C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2EI4 2.1 Å NON-ENZYME: OTHER TRIMERIC COMPLEX OF ARCHAERHODOPSIN-2 HALOBACTERIUM SP. AUS-2 MEMBRANE PROTEIN RETINAL BACTERIORUBERIN PROTON PUMP TRAPROTEIN
Ref.: STRUCTURAL ROLE OF BACTERIORUBERIN IN THE TRIMERIC OF ARCHAERHODOPSIN-2 J.MOL.BIOL. V. 375 1267 2008
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 2EI4 - 22B C50 H76 O4 CC(=C/C=C/....
2 2Z55 - 22B C50 H76 O4 CC(=C/C=C/....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 2EI4 - 22B C50 H76 O4 CC(=C/C=C/....
2 2Z55 - 22B C50 H76 O4 CC(=C/C=C/....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 3VI0 - SOG C14 H28 O5 S CCCCCCCCS[....
2 3VHZ - SOG C14 H28 O5 S CCCCCCCCS[....
3 2EI4 - 22B C50 H76 O4 CC(=C/C=C/....
4 2Z55 - 22B C50 H76 O4 CC(=C/C=C/....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: 22B; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 22B 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2EI4; Ligand: 22B; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2ei4.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 2EI4; Ligand: 22B; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2ei4.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2EI4; Ligand: 22B; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2ei4.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
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