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Receptor
PDB id Resolution Class Description Source Keywords
2EV9 1.9 Å EC: 1.1.1.25 CRYSTAL STRUCTURE OF SHIKIMATE 5-DEHYDROGENASE (AROE) FROM T THERMOPHILUS HB8 IN COMPLEX WITH NADP(H) AND SHIKIMATE THERMUS THERMOPHILUS SUBSTRATE SHIKIMATE COFACTOR DIMER STRUCTURAL GENOMICS NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYRIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE RSGI OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURES OF SHIKIMATE DEHYDROGENASE AROE THERMUS THERMOPHILUS HB8 AND ITS COFACTOR AND SUBST COMPLEXES: INSIGHTS INTO THE ENZYMATIC MECHANISM J.MOL.BIOL. V. 373 424 2007
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAP A:1411;
Valid;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
SKM A:301;
B:302;
Valid;
Valid;
none;
none;
submit data
174.151 C7 H10 O5 C1[C@...
SO4 A:1402;
B:1401;
Invalid;
Invalid;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2EV9 1.9 Å EC: 1.1.1.25 CRYSTAL STRUCTURE OF SHIKIMATE 5-DEHYDROGENASE (AROE) FROM T THERMOPHILUS HB8 IN COMPLEX WITH NADP(H) AND SHIKIMATE THERMUS THERMOPHILUS SUBSTRATE SHIKIMATE COFACTOR DIMER STRUCTURAL GENOMICS NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYRIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE RSGI OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURES OF SHIKIMATE DEHYDROGENASE AROE THERMUS THERMOPHILUS HB8 AND ITS COFACTOR AND SUBST COMPLEXES: INSIGHTS INTO THE ENZYMATIC MECHANISM J.MOL.BIOL. V. 373 424 2007
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 2EV9 - SKM C7 H10 O5 C1[C@H]([C....
2 2CY0 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 2D5C - SKM C7 H10 O5 C1[C@H]([C....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 2EV9 - SKM C7 H10 O5 C1[C@H]([C....
2 2CY0 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 2D5C - SKM C7 H10 O5 C1[C@H]([C....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 2EV9 - SKM C7 H10 O5 C1[C@H]([C....
2 2CY0 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAP; Similar ligands found: 123
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NHD 0.68254 0.958904
10 NJP 0.661417 0.972973
11 NFD 0.658915 0.934211
12 NXX 0.619048 0.959459
13 DND 0.619048 0.959459
14 AMP NAD 0.606061 0.958904
15 ZID 0.605839 0.972603
16 NAQ 0.59854 0.922078
17 ATR 0.59292 0.917808
18 NAE 0.591241 0.946667
19 NDE 0.58042 0.986301
20 A22 0.571429 0.958904
21 NAJ 0.567164 0.986111
22 A2R 0.563025 0.932432
23 NDC 0.561644 0.922078
24 NA7 0.552846 0.907895
25 ODP 0.551471 0.935065
26 A2P 0.539823 0.930556
27 8ID 0.537313 0.910256
28 NPW 0.525547 0.8875
29 NZQ 0.521739 0.910256
30 CNA 0.521739 0.959459
31 NDP 0.514493 0.922078
32 PO4 PO4 A A A A PO4 0.503937 0.930556
33 1DG 0.503401 0.922078
34 DG1 0.503401 0.922078
35 TXP 0.5 0.922078
36 NMN AMP PO4 0.492958 0.921053
37 XNP 0.492958 0.875
38 25L 0.492308 0.958904
39 25A 0.492063 0.972222
40 NMN 0.486726 0.888889
41 NGD 0.485714 0.935065
42 9JJ 0.481707 0.8875
43 2AM 0.477876 0.891892
44 ADP 0.458333 0.945205
45 PAP 0.451613 0.931507
46 A2D 0.445378 0.945205
47 AN2 0.442623 0.932432
48 7L1 0.441558 0.777778
49 ADP PO3 0.44 0.944444
50 SAP 0.44 0.896104
51 AGS 0.44 0.896104
52 M33 0.439024 0.906667
53 AR6 AR6 0.438849 0.945205
54 BA3 0.438017 0.945205
55 OAD 0.43609 0.92
56 ADP BMA 0.43609 0.92
57 DQV 0.435714 0.958904
58 HEJ 0.435484 0.945205
59 ATP 0.435484 0.945205
60 OOB 0.435115 0.958904
61 B4P 0.434426 0.945205
62 AP5 0.434426 0.945205
63 GAP 0.433071 0.92
64 0WD 0.432432 0.922078
65 2A5 0.432 0.87013
66 5FA 0.432 0.945205
67 AQP 0.432 0.945205
68 AT4 0.430894 0.907895
69 00A 0.428571 0.909091
70 DAL AMP 0.427481 0.932432
71 CA0 0.427419 0.92
72 ADP ALF 0.426357 0.871795
73 ALF ADP 0.426357 0.871795
74 9X8 0.425373 0.871795
75 ACP 0.424 0.92
76 NAJ PZO 0.423841 0.897436
77 9SN 0.423358 0.897436
78 ADP VO4 0.423077 0.932432
79 VO4 ADP 0.423077 0.932432
80 WAQ 0.422222 0.884615
81 V3L 0.421875 0.945205
82 ACQ 0.421875 0.92
83 ADQ 0.421053 0.92
84 AR6 0.420635 0.918919
85 APR 0.420635 0.918919
86 ATP A A A 0.42029 0.958333
87 CO7 0.419753 0.786517
88 3OD 0.419118 0.92
89 1ZZ 0.419118 0.841463
90 DLL 0.41791 0.958904
91 AD9 0.417323 0.92
92 NAX 0.416667 0.875
93 OVE 0.416667 0.857143
94 MYR AMP 0.416058 0.841463
95 AV2 0.415385 0.868421
96 A3P 0.414634 0.944444
97 NNR 0.414414 0.72973
98 OMR 0.413793 0.831325
99 6YZ 0.412214 0.92
100 ANP 0.410853 0.92
101 A1R 0.410448 0.860759
102 ABM 0.409836 0.893333
103 A 0.408333 0.944444
104 AMP 0.408333 0.944444
105 SON 0.408 0.933333
106 PPS 0.407692 0.829268
107 5AL 0.407692 0.932432
108 NAI 0.406897 0.909091
109 7D3 0.406504 0.857143
110 ADX 0.404762 0.829268
111 ATF 0.40458 0.907895
112 3UK 0.404412 0.945946
113 TYR AMP 0.404255 0.921053
114 AMP DBH 0.404255 0.894737
115 139 0.402685 0.875
116 50T 0.401575 0.906667
117 SRP 0.401515 0.907895
118 A A 0.40146 0.972222
119 B5V 0.40146 0.933333
120 A3R 0.4 0.860759
121 3AM 0.4 0.90411
122 B5M 0.4 0.921053
123 FA5 0.4 0.933333
Ligand no: 2; Ligand: SKM; Similar ligands found: 2
No: Ligand ECFP6 Tc MDL keys Tc
1 SKM 1 1
2 S3P 0.456522 0.641026
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2EV9; Ligand: SKM; Similar sites found with APoc: 156
This union binding pocket(no: 1) in the query (biounit: 2ev9.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 3NBC LAT None
2 3FV1 DYH 0.78125
3 2AQX ATP 1.52091
4 3T50 FMN 1.5625
5 5NB7 8NQ 1.73913
6 1GT4 UNA 1.88679
7 3SXS PP2 1.90114
8 5MW4 5JU 1.90114
9 2BJU IH4 2.28137
10 3UMV FAD 2.28137
11 4ASE AV9 2.28137
12 3W8X FAD 2.28137
13 3GD9 GLC BGC BGC BGC 2.28137
14 3EWC MCF 2.28137
15 3U2U UDP 2.28137
16 5CKW ANP 2.28137
17 1F9V ADP 2.28137
18 1UU1 PMP HSA 2.38806
19 4JLS 3ZE 2.63158
20 3AJ6 NGA 2.6616
21 5W4W 9WG 2.6616
22 1RKX NAD 2.6616
23 5XDT ZI7 2.6616
24 4KBA 1QM 2.6616
25 2P1M IHP 2.6616
26 3MJY FMN 2.6616
27 3MJY IJZ 2.6616
28 2P1O IHP 2.6616
29 2P1O NLA 2.6616
30 1DQX BMP 2.6616
31 4WQQ MAN 2.83688
32 4PO2 ASN ARG LEU LEU LEU THR GLY 2.97872
33 2Q8Z NUP 3.04183
34 3CL5 SIO 3.04183
35 5VJE GOS 3.04183
36 4LA7 A1O 3.04183
37 5H2U 1N1 3.04183
38 1EZ4 NAD 3.04183
39 3JSX CC2 3.04183
40 3JSX FAD 3.04183
41 2WXD E18 3.04183
42 5NUF NAD 3.04183
43 1U7Z PMT 3.09735
44 3OJI PYV 3.1746
45 5JO1 6LM 3.24324
46 1ZDQ MSM 3.27381
47 5A4W QCT 3.30189
48 5DQ8 FLF 3.33333
49 3H22 B53 3.367
50 5OOH 9ZZ 3.39806
51 5OOH NAP 3.39806
52 4OUJ LBT 3.42205
53 1PVN MZP 3.42205
54 2FFC U5P 3.42205
55 2WEI VGG 3.42205
56 3IGO ANP 3.42205
57 2C29 NAP 3.80228
58 5HES 032 3.80228
59 5JGA 6KC 3.80228
60 5MUA GAL 3.80228
61 1Y1P NMN AMP PO4 3.80228
62 3EWK FAD 3.80228
63 3V91 UPG 3.80228
64 5JFL NAD 3.81679
65 4K55 H6P 4.03226
66 1NB9 RBF 4.08163
67 1NB9 ADP 4.08163
68 5DKK FMN 4.13793
69 5FAL COA 4.18251
70 5FAL SKT 4.18251
71 2Z48 NGA 4.18251
72 2XCG XCG 4.18251
73 1W96 S1A 4.18251
74 2Z49 AMG 4.18251
75 2Z48 A2G 4.18251
76 3KFL ME8 4.18251
77 2CFC NAD 4.18251
78 5UCD NAP 4.18251
79 4NV7 COA 4.18251
80 5UR6 8KM 4.41989
81 4WVO 3UZ 4.41989
82 5GWT SIN 4.56274
83 2IU8 PLM 4.56274
84 5N2D 8J8 4.86111
85 2BKA NDP 4.94297
86 4R1S NAP 4.94297
87 4HKP TKW 4.94297
88 5YSS NAD 4.94297
89 2QCD U5P 5
90 5DEP UD1 5.03876
91 4XXH T6P 5.09804
92 3JRS A8S 5.28846
93 4LY9 S6P 5.32319
94 4ZL4 4PK 5.32319
95 3D72 FAD 5.36913
96 2ZQO NGA 5.38462
97 3KDJ A8S 5.44554
98 4CBU ATP 5.51181
99 4G9N NGA 5.59441
100 3NRZ FAD 5.70342
101 6C8X BVR 6.06061
102 5M90 JIF 6.08365
103 2GN4 UD1 6.08365
104 3FXU TSU 6.08365
105 3JRX S1A 6.08365
106 4OIV XX9 6.19469
107 3PE2 E1B 6.46388
108 5L2R MLA 6.46388
109 5ZEC NAP 6.46388
110 5BJX NAD 6.46388
111 5BJX UDP 6.46388
112 4DPL NAP 6.46388
113 2GLX NDP 6.46388
114 2RHQ GAX 6.46388
115 2IVD FAD 7.22433
116 1T36 U 7.22433
117 1X7D ORN 7.22433
118 1T36 ADP 7.22433
119 4KWI NAP 7.22433
120 1TED MYR 7.22433
121 2OFV 242 7.60456
122 1H5Q NAP 7.60456
123 4RPO T6C 7.62332
124 1V5Y FMN 7.8341
125 1V5Y 4HC 7.8341
126 2B3D FAD 7.84314
127 3D91 REM 7.91789
128 5BSH PRO 7.98479
129 2HK5 1BM 8.36502
130 5XIJ ANP 8.36502
131 5XIJ 873 8.36502
132 2Q46 NAP 8.69565
133 4X8O AP5 8.74525
134 5XIO HFG 8.74525
135 3GC8 B45 9.12547
136 3ORQ ADP 9.12547
137 4PVD NDP 9.12547
138 2ZBA COA 9.12547
139 4XJC TTP 9.60452
140 1JCM 137 9.88593
141 3VPH OXM 9.88593
142 3VC1 GST 10.2662
143 3VC1 SAH 10.2662
144 1BQ4 BHC 10.5691
145 1U8X NAD 10.6464
146 3U4C NDP 11.0266
147 2VUT NAD 11.6279
148 3DZ6 M8E 11.9403
149 5UY8 AMZ 12.5475
150 5CG1 NAD BBN 12.5475
151 5MJA 7O3 13.6882
152 6H39 FGY 15.2091
153 1RJW ETF 16.3498
154 5NWD 9C8 20.4082
155 3ZC7 ATP 23.8095
156 3VPB ADP 26.7857
Pocket No.: 2; Query (leader) PDB : 2EV9; Ligand: SKM; Similar sites found with APoc: 873
This union binding pocket(no: 2) in the query (biounit: 2ev9.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 5KK4 44E None
2 2ZFZ ARG None
3 5YRF GLC GLC None
4 1NU4 MLA None
5 3PA8 IHP None
6 3RF4 FUN None
7 4CJX NAP 0.760456
8 5A96 GTP 1.20482
9 1YS4 NAP 1.52091
10 4YAG NAI 1.52091
11 5OSW DIU 1.52091
12 1EBF NAD 1.90114
13 1O6Z NAD 1.90114
14 1GAD NAD 1.90114
15 1F8F NAD 1.90114
16 1F8G NAD 1.90114
17 3HAD NAD 1.90114
18 1X87 NAD 1.90114
19 4PLT NAI 1.90114
20 4PLT OXM 1.90114
21 5O42 9JW 1.90114
22 5O42 BGC 1.90114
23 5O42 NAD 1.90114
24 2B9W FAD 1.90114
25 5W3K NDP 1.90114
26 3O9Z AKG 1.90114
27 5W3K 9TY 1.90114
28 3O9Z NAD 1.90114
29 1OC2 NAD 1.90114
30 1OC2 TDX 1.90114
31 3DAG FEG 1.90114
32 5GT9 NAP 1.90114
33 4DSG FAD 1.90114
34 2NAD NAD 1.90114
35 4XDY NAI 1.90114
36 5DNK SAH 1.90114
37 2GDZ NAD 1.90114
38 1XCL SAH 2.12766
39 3CBG SAH 2.15517
40 3WUC GLC GAL 2.18978
41 1V6A TRE 2.28137
42 3GFB NAD 2.28137
43 1J0X NAD 2.28137
44 4L8V NAP 2.28137
45 4GKV NAD 2.28137
46 5T9E NAP 2.28137
47 1LDM NAD 2.28137
48 4ZCC NAI 2.28137
49 4ZCC FAD 2.28137
50 5T9F NAP 2.28137
51 5T9F TYR 2.28137
52 5GSN MMZ 2.28137
53 5GSN FAD 2.28137
54 5GSN NAP 2.28137
55 4NTC FAD 2.28137
56 5YAP NAI 2.28137
57 5O4J SAH 2.28137
58 1R37 NAD 2.28137
59 5O4J PJL 2.28137
60 5O4J 9KH 2.28137
61 5YAP 8S0 2.28137
62 3NTA FAD 2.28137
63 4Z24 FAD 2.28137
64 3CGB FAD 2.28137
65 3NTD FAD 2.28137
66 2JK0 ASP 2.28137
67 3NT6 FAD 2.28137
68 2ZB3 NDP 2.28137
69 2BOI MFU 2.28137
70 4YNU FAD 2.28137
71 4D42 W0I 2.28137
72 4D42 NAP 2.28137
73 1KNR FAD 2.28137
74 4YNU LGC 2.28137
75 1U7T NAD 2.29885
76 1U7T TDT 2.29885
77 4IF4 BEF 2.40385
78 1P1C SAH 2.51256
79 2JDU MFU 2.6087
80 1SNN 5RP 2.64317
81 1J49 NAD 2.6616
82 5TC4 NAD 2.6616
83 2A92 NAI 2.6616
84 1SC6 NAD 2.6616
85 4MP8 MLI 2.6616
86 4MP8 NAD 2.6616
87 4PLG OXM 2.6616
88 4PLG NAI 2.6616
89 1PZG A3D 2.6616
90 5ZYN FAD 2.6616
91 1C0I BE2 2.6616
92 1C0I FAD 2.6616
93 1Q0H FOM 2.6616
94 1Q0H NDP 2.6616
95 3QVP FAD 2.6616
96 1VQW FAD 2.6616
97 1T26 GBD 2.6616
98 1T26 NAI 2.6616
99 1OBB NAD 2.6616
100 2GVC FAD 2.6616
101 4JJF FE9 2.6616
102 3H8V ATP 2.6616
103 1QMG APX 2.6616
104 1BXK NAD 2.6616
105 2GV8 FAD 2.6616
106 4J1Q NDP 2.6616
107 6F7L FAD 2.6616
108 4JJF N2I 2.6616
109 3JQA NAP 2.6616
110 5JDI NAP 2.6616
111 2VZ0 D64 2.6616
112 2VZ0 NAP 2.6616
113 5K6A NAP 2.6616
114 4CM9 NAP 2.6616
115 3GF4 UPG 2.6616
116 2GV8 NDP 2.6616
117 2XVF FAD 2.6616
118 6FP4 E1T 2.6616
119 3BMO NAP 2.6616
120 5JCJ NAP 2.6616
121 3JQ7 NAP 2.6616
122 4CLR NAP 2.6616
123 4CMI NAP 2.6616
124 3JQF NAP 2.6616
125 3BMN NAP 2.6616
126 5JWC FAD 2.6616
127 2WD7 NAP 2.6616
128 4CM4 NAP 2.6616
129 3JQG NAP 2.6616
130 3BMQ NAP 2.6616
131 3F8D FAD 2.6616
132 5JDC NAP 2.6616
133 3GF4 FAD 2.6616
134 3RFV NAI 2.6616
135 3DUW SAH 2.69058
136 3OID NDP 2.71318
137 3SJ7 NDP 2.77778
138 2DTJ THR 2.80899
139 2DC1 NAD 2.9661
140 2VWA PTY 2.9703
141 1FWV SGA MAG FUC 2.98507
142 2F1K NAP 3.04183
143 2VYN NAD 3.04183
144 1GQ2 NAP 3.04183
145 5NM7 GLY 3.04183
146 4KP7 NAP 3.04183
147 5VKT NAP 3.04183
148 4KP7 1UQ 3.04183
149 2O4C NAD 3.04183
150 1YFS ALA 3.04183
151 2FR1 NDP 3.04183
152 2RAB NAD 3.04183
153 2B4R NAD 3.04183
154 4MOP 2H5 3.04183
155 5NUE NAD 3.04183
156 2RAB FAD 3.04183
157 1KEV NDP 3.04183
158 3HB5 NAP 3.04183
159 3OJO NAD 3.04183
160 5MBX FAD 3.04183
161 5MBX SP5 3.04183
162 2B4R AES 3.04183
163 3WGT FAD 3.04183
164 3WGT QSC 3.04183
165 4ITU 1HS 3.04183
166 2WET FAD 3.04183
167 3WQQ IB3 3.04183
168 3WQQ NDP 3.04183
169 1JA9 NDP 3.04183
170 4PIV NDP 3.04183
171 1RYD NDP 3.04183
172 1H6C NDP 3.04183
173 4ITU NAI 3.04183
174 6F9Q NAD 3.04183
175 4FC7 COA 3.04183
176 4FC7 NAP 3.04183
177 4B7X NAP 3.04183
178 1P31 EPU 3.15789
179 4EA7 JB2 3.18182
180 4EA7 COA 3.18182
181 2VOH CIT 3.18471
182 3ORF NAD 3.18725
183 1JAY NAP 3.30189
184 4B4U NAP 3.42205
185 1V59 NAD 3.42205
186 2HJR APR 3.42205
187 5UR0 NAD 3.42205
188 1O0S NAI 3.42205
189 3BAZ NAP 3.42205
190 5ZI2 NAD 3.42205
191 5ZI2 ADP 3.42205
192 1E3I CXF 3.42205
193 6CEP NAD 3.42205
194 3CIF NAD 3.42205
195 6CEP OXM 3.42205
196 3WBF NAP 3.42205
197 3WBF API 3.42205
198 4UP3 NDP 3.42205
199 2BRY FAD 3.42205
200 2Q7V FAD 3.42205
201 5A1T NAI 3.42205
202 3ZNN FAD 3.42205
203 3ZNN 4WL 3.42205
204 4TXI FAD 3.42205
205 5A1T OXM 3.42205
206 2ZJ1 NAD 3.42205
207 1D4D FAD 3.42205
208 2ZJ1 ARJ 3.42205
209 1W8D NAP 3.42205
210 1YKF NAP 3.42205
211 3NGL NAP 3.42205
212 1W73 NAP 3.42205
213 3CIF G3H 3.42205
214 1V59 FAD 3.42205
215 5A04 BGC 3.42205
216 4JBI NDP 3.42205
217 3LAD FAD 3.42205
218 1W6U NAP 3.42205
219 2QRK AMP 3.42205
220 2XZ9 PYR 3.42205
221 2RGH FAD 3.42205
222 5A04 NDP 3.42205
223 3O01 DXC 3.42205
224 2GSD NAD 3.42205
225 3SSO SAH 3.42205
226 3ZV6 4HB 3.42205
227 2YIV YIV 3.42205
228 3WMX NAD 3.42205
229 4UP3 FAD 3.42205
230 1UJ5 5RP 3.52423
231 2WSB NAD 3.54331
232 1J5P NAD 3.55731
233 1LSS NAD 3.57143
234 3FPZ AHZ 3.68098
235 1X14 NAD 3.80228
236 3K5I AIR 3.80228
237 1LVL NAD 3.80228
238 1SOW NAD 3.80228
239 1B8U NAD 3.80228
240 2I3G NAP 3.80228
241 2IID PHE 3.80228
242 2IID FAD 3.80228
243 4LH7 1X8 3.80228
244 2V95 HCY 3.80228
245 4M52 FAD 3.80228
246 1B8U OAA 3.80228
247 2VTD LKM 3.80228
248 4M52 M52 3.80228
249 3V1U NAD 3.80228
250 6F97 FAD 3.80228
251 2A8X FAD 3.80228
252 1Z45 NAD 3.80228
253 1U1I NAD 3.80228
254 5L53 NAP 3.80228
255 1TDF NAP 3.80228
256 2RI1 GLP 3.82979
257 2CUL FAD 3.87931
258 3ZQE DXC 3.93443
259 4NBU NAI 4
260 5X68 FAD 4.09207
261 3P7G MAN 4.10959
262 2HMT NAI 4.16667
263 5GZ6 NDP 4.18251
264 1HYH NAD 4.18251
265 5GZ6 7C3 4.18251
266 3CGD FAD 4.18251
267 3CGD COA 4.18251
268 1E5Q NDP 4.18251
269 3CGD NAD 4.18251
270 4EMI NAD 4.18251
271 5BVA FAD 4.18251
272 5VN0 NAI 4.18251
273 5BRT CH9 4.18251
274 1GR0 NAD 4.18251
275 3KLJ FAD 4.18251
276 2WPF WPF 4.18251
277 2WPF FAD 4.18251
278 5G3U ITW 4.18251
279 5BRT FAD 4.18251
280 1BZL GCG 4.18251
281 3QTP 2PG 4.18251
282 3C1O NAP 4.18251
283 1BZL FAD 4.18251
284 5VN0 FAD 4.18251
285 4REP FAD 4.18251
286 1GEE NAD 4.18251
287 4EMI FAD 4.18251
288 5G3U FDA 4.18251
289 5DF1 58X 4.18251
290 5DF1 NAP 4.18251
291 5XEG AKG 4.18251
292 5ZBC FAD 4.18251
293 2HZL PYR 4.18251
294 1PGP 6PG 4.18251
295 2VT3 ATP 4.18605
296 4ZGR NGA GAL 4.21456
297 1CER NAD 4.22961
298 5UAO FAD 4.25139
299 6FHO FAD 4.26065
300 2BOS GLA GAL GLC NBU 4.41176
301 6AIN FAD 4.54545
302 1PJS NAD 4.56274
303 6AA8 NAD 4.56274
304 1RYI GOA 4.56274
305 1PN0 FAD 4.56274
306 1PN0 IPH 4.56274
307 4BJZ P3A 4.56274
308 4BJZ FAD 4.56274
309 3H9E NAD 4.56274
310 6C4M NAP 4.56274
311 4NTD FAD 4.56274
312 5HSA FAS 4.56274
313 1RYI FAD 4.56274
314 4YKG NAD 4.56274
315 1WD4 AHR 4.56274
316 2C7G FAD 4.56274
317 2C7G ODP 4.56274
318 5XWV 8H6 4.56274
319 2QZZ NAP 4.56274
320 2QZZ EMF 4.56274
321 4XYB NDP 4.56274
322 5XWV NDP 4.56274
323 4TM3 FAD 4.56274
324 4YKG FAD 4.56274
325 5GWT NAD 4.56274
326 5OLK DTP 4.56274
327 4CNK MEU 4.56274
328 4CNK FAD 4.56274
329 6EL3 NAP 4.56274
330 1E3W NAD 4.5977
331 2AE2 PTO 4.61538
332 1E6W NAD 4.61538
333 2AE2 NAP 4.61538
334 4EMJ FAD 4.6729
335 1TE2 PGA 4.86726
336 1C3V NDP 4.89796
337 5I39 FAD 4.90196
338 3ICT ADP 4.94297
339 3ICS ADP 4.94297
340 1MV8 NAD 4.94297
341 1CDO NAD 4.94297
342 5AYV NAP 4.94297
343 1MUU NAD 4.94297
344 3CMC NAD 4.94297
345 5BUK FAD 4.94297
346 1Q9I FAD 4.94297
347 1Q9I TEO 4.94297
348 6C4T NA7 4.94297
349 5AYV KPL 4.94297
350 1LC3 NAD 4.94297
351 4HXY NDP 4.94297
352 1JNR FAD 4.94297
353 5MDH NAD 4.94297
354 4K5S PM0 4.94297
355 1GZ6 NAI 4.94297
356 4XFR CIT 4.94297
357 3Q3C NAD 4.94297
358 4K5S FAD 4.94297
359 1R6D DAU 4.94297
360 3ICT FAD 4.94297
361 1R6D NAD 4.94297
362 3ICR FAD 4.94297
363 3ICS FAD 4.94297
364 1YB5 NAP 4.94297
365 5ZI9 FLC 4.94297
366 1M0S CIT 4.94297
367 4USR FAD 4.94297
368 4MDH NAD 4.94297
369 2BD0 NAP 4.94297
370 4EIP FAD 4.94297
371 4EUE NAI 4.94297
372 2ZAT NAP 4.94297
373 4USQ FAD 4.94297
374 3WV8 ATP 5.04587
375 1PU7 39A 5.04587
376 1XHC FAD 5.17711
377 1VM6 NAD 5.26316
378 5D4V SAH 5.32319
379 4ZVV NAD 5.32319
380 4ZVV GN0 5.32319
381 9LDB NAD 5.32319
382 9LDT NAD 5.32319
383 1SAY PYR 5.32319
384 5Z20 NAI 5.32319
385 5TUF TDC 5.32319
386 1UP7 NAD 5.32319
387 2RGJ FAD 5.32319
388 5DN9 NAD 5.32319
389 3LZW FAD 5.32319
390 5TUF FAD 5.32319
391 5KOX RFP 5.32319
392 1ZQ9 SAM 5.32319
393 3AB1 FAD 5.32319
394 3LZW NAP 5.32319
395 5KOX FAD 5.32319
396 6GAS FAD 5.32319
397 3N29 GOL 5.32319
398 5GUD NDP 5.32319
399 1NAA ABL 5.32319
400 1NAA 6FA 5.32319
401 4NV1 0FX 5.34979
402 5U5N NAD 5.37634
403 1DRV A3D 5.49451
404 1EJ0 SAM 5.55556
405 3RGG AIR 5.66038
406 4OM8 NAD 5.70342
407 1O94 ADP 5.70342
408 5J5Z FAD 5.70342
409 1H2B NAJ 5.70342
410 5YU3 NAD 5.70342
411 5YU3 PRO 5.70342
412 5KMS NAD 5.70342
413 3OND NAD 5.70342
414 3OND ADN 5.70342
415 1ZK7 FAD 5.70342
416 2F5Z FAD 5.70342
417 5VLQ ANP 5.70342
418 5EOW FAD 5.70342
419 1DJN ADP 5.70342
420 3M89 GSP 5.70342
421 3QFA FAD 5.70342
422 2PK3 A2R 5.70342
423 5KMS FAD 5.70342
424 2WMH GAL FUC 5.70342
425 1ZBQ NAD 5.70342
426 3RC1 NAP 5.71429
427 1Q1R FAD 5.80046
428 2DKN NAI 5.88235
429 5TTJ FAD 5.91837
430 3T31 DCQ 5.94966
431 3T31 FAD 5.94966
432 1LTH NAD 5.95611
433 2XVE FAD 6.03448
434 5KQA GSH 6.06061
435 1KYQ NAD 6.08365
436 5YEC ATP 6.08365
437 4YCA NDP 6.08365
438 1YJQ NAP 6.08365
439 1NVM NAD 6.08365
440 3IHG FAD 6.08365
441 1HYE NAP 6.08365
442 4FN4 NAD 6.08365
443 3GD4 FAD 6.08365
444 1RSG FAD 6.08365
445 2OEM 1AE 6.08365
446 3GD4 NAD 6.08365
447 2GMH FAD 6.08365
448 1YY5 FAD 6.08365
449 1G0N PHH 6.08365
450 1G0N NDP 6.08365
451 1GET NAP 6.08365
452 1GET FAD 6.08365
453 2ZB4 5OP 6.08365
454 2ZB4 NAP 6.08365
455 2GN4 NDP 6.08365
456 1Z82 NDP 6.08365
457 4IV9 FAD 6.08365
458 1IY8 NAD 6.08365
459 3E3U NVC 6.09137
460 5G6U TRP 6.13027
461 2QA1 FAD 6.2
462 5L95 AMP 6.25
463 3SAO DBH 6.25
464 4BVA NDP 6.46388
465 3B1F NAD 6.46388
466 5U8U FAD 6.46388
467 4BVA T3 6.46388
468 4E5N NAD 6.46388
469 2YVF NAD 6.46388
470 2YVF FAD 6.46388
471 5FI3 NAP 6.46388
472 5MZI FYK 6.46388
473 5MZI FAD 6.46388
474 5Y77 FAD 6.46388
475 2NPX NAD 6.46388
476 4AP3 FAD 6.46388
477 4AP3 NAP 6.46388
478 3E1T FAD 6.46388
479 1H82 GZZ 6.46388
480 1H82 FAD 6.46388
481 1KJ8 GAR 6.46388
482 2R4J FAD 6.46388
483 2R4J 13P 6.46388
484 5FJN FAD 6.46388
485 5FJN BE2 6.46388
486 1FEC FAD 6.46388
487 2NPX FAD 6.46388
488 6C4N NAP 6.46388
489 2DM6 NAP 6.46388
490 1LJ8 NAD 6.46388
491 2DM6 IMN 6.46388
492 4Y1B NAP 6.46388
493 1M2W NAD 6.46388
494 1FK8 NAD 6.61479
495 4XB2 NDP 6.84411
496 1A5Z NAD 6.84411
497 4XB2 HSE 6.84411
498 5U5G NAP 6.84411
499 4OOE FOM 6.84411
500 4OOE NDP 6.84411
501 3ULK NDP 6.84411
502 1MO9 KPC 6.84411
503 6ER9 FAD 6.84411
504 6ER9 NAP 6.84411
505 1MO9 FAD 6.84411
506 4J36 1HR 6.84411
507 4J36 FAD 6.84411
508 5NMX NAP 6.84411
509 1F06 2NP 6.84411
510 1F06 NDP 6.84411
511 2E5V FAD 6.84411
512 2FZW NAD 6.84411
513 5KVS NAP 6.84411
514 5WGR FAD 6.84411
515 2BGM NAJ 6.84411
516 2RH4 EMO 6.84411
517 5NMX FAD 6.84411
518 4YT4 FE9 6.84411
519 3X0V FAD 6.84411
520 5MQ6 NDP 6.84411
521 5BOE PEP 6.84411
522 4NBT NAD 6.84411
523 1A5Z FBP 6.84411
524 3ITJ CIT 6.84411
525 3HDY FAD 6.84411
526 1FS5 TLA 6.84411
527 3HDY GDU 6.84411
528 3HDY FDA 6.84411
529 3G5S FAD 6.84411
530 2JHP SAH 6.84411
531 3ITJ FAD 6.84411
532 1DIG NAP 6.86275
533 1DIG L37 6.86275
534 1HDR NAD 6.96721
535 1PR9 NAP 6.96721
536 3D3W NAP 6.96721
537 2HNK SAH 7.11297
538 3MMH SME 7.18563
539 5OJL TXP 7.22433
540 2OOR NAD 7.22433
541 4E13 NAD 7.22433
542 1WDK NAD 7.22433
543 4KOA NDP 7.22433
544 1V8B NAD 7.22433
545 5XVH NAP 7.22433
546 1DLJ UGA 7.22433
547 1DLJ NAI 7.22433
548 2AG8 NAP 7.22433
549 2PV7 NAD 7.22433
550 4YAC NAI 7.22433
551 1X7D NAD 7.22433
552 1ZEM NAD 7.22433
553 5J60 FAD 7.22433
554 5K0A FAD 7.22433
555 4JDR FAD 7.22433
556 2CVQ NDP 7.22433
557 4KWI 1TJ 7.22433
558 1RP0 AHZ 7.22433
559 5TUK FAD 7.22433
560 1L7E NAI 7.22433
561 4CQM NAP 7.22433
562 3FG2 FAD 7.22433
563 2JB2 FAD 7.22433
564 2JB2 PHE 7.22433
565 4CU7 GIF 7.22433
566 1GPM CIT 7.22433
567 5NII FAD 7.22433
568 1NM5 NAD 7.22433
569 1QO8 FAD 7.22433
570 3EGI ADP 7.22433
571 6F3N NAD 7.60456
572 6F3N ADN 7.60456
573 1GUZ NAD 7.60456
574 1GV0 NAD 7.60456
575 6F3M NAD 7.60456
576 2GCG NDP 7.60456
577 3L4S NAD 7.60456
578 3L4S 3PG 7.60456
579 5JCM NAD 7.60456
580 1RM0 D6P 7.60456
581 1RM0 NAI 7.60456
582 2AQJ FAD 7.60456
583 2AQJ TRP 7.60456
584 4XDZ NDP 7.60456
585 4B63 ORN 7.60456
586 4B63 FAD 7.60456
587 4B63 NAP 7.60456
588 2YG3 FAD 7.60456
589 5JCM ISD 7.60456
590 5JCM FAD 7.60456
591 3H5N ATP 7.60456
592 1WPQ NAD 7.60456
593 5Y8L HUI 7.60456
594 5Y8L NAD 7.60456
595 4IDC 1XX 7.60456
596 4IDC NDP 7.60456
597 4BV6 FAD 7.60456
598 5EZ7 FAD 7.60456
599 4J56 FAD 7.60456
600 5TDF ADE 7.60456
601 3ETG GLU 7.60456
602 5E4R NAP 7.60456
603 3ETG NDP 7.60456
604 1KEW NAD 7.60456
605 1KEW TYD 7.60456
606 3ETG GTP 7.60456
607 1ZH8 NAP 7.64706
608 4RQU NAD 7.98479
609 5KKA 6V0 7.98479
610 1P0F NAP 7.98479
611 1YKJ PHB 7.98479
612 1YKJ FAD 7.98479
613 5MIT NAP 7.98479
614 5MIT FAD 7.98479
615 1E1M NAP 7.98479
616 1E1M FAD 7.98479
617 2B5W NAP 7.98479
618 4D04 NAP 7.98479
619 4D04 FAD 7.98479
620 5TWB FAD 7.98479
621 1CF2 NAP 7.98479
622 5OC1 FAD 7.98479
623 1N1G BCP 7.98479
624 5L4L NAP 7.98479
625 1VL0 NAI 7.98479
626 1E6E FAD 7.98479
627 4NBW NAD 7.98479
628 2AHR NAP 7.98479
629 1UDB UFG 7.98479
630 1UDB NAD 7.98479
631 4O0L NDP 8
632 6GAR FAD 8.02292
633 1T0S BML 8.13953
634 2D2I NAP 8.1579
635 2QX0 PH2 8.1761
636 2DFV NAD 8.36502
637 1D1T NAD 8.36502
638 1Y8Q ATP 8.36502
639 4W6Z 8ID 8.36502
640 1HKU NAD 8.36502
641 1DSS NAD 8.36502
642 1KOL NAD 8.36502
643 4JNA FAD 8.36502
644 5J7X FAD 8.36502
645 3SJU NDP 8.36502
646 3RMK BML 8.36502
647 1SQS TLA 8.67769
648 2IZ1 ATR 8.74525
649 1LDN NAD 8.74525
650 4R5M NAP 8.74525
651 5CAE COA 8.74525
652 5O9F 9ON 8.74525
653 5O9F NAD 8.74525
654 4R5M 4NO 8.74525
655 3GMB FAD 8.74525
656 3AYI HCI 8.74525
657 3AYI FAD 8.74525
658 3OA2 NAD 8.74525
659 5CAE SIN 8.74525
660 5ODQ FAD 8.74525
661 5N0J FAD 8.74525
662 1VL8 NAP 8.74525
663 4I7E PEP 8.74525
664 1XG5 NAP 8.74525
665 3NUG NAD 8.74525
666 3CH6 NAP 8.74525
667 3CH6 311 8.74525
668 5NA1 FAD 8.82353
669 3FZG SAM 9
670 4Y9D NAI 9.12547
671 2CVZ NDP 9.12547
672 3S5W NAP 9.12547
673 4GUS FAD 9.12547
674 4GUT FAD 9.12547
675 4FWE FAD 9.12547
676 1WP4 NDP 9.12547
677 3UOY NAP 9.12547
678 3UOY FAD 9.12547
679 4HSU FAD 9.12547
680 1PS9 NAP 9.12547
681 1GPE FAD 9.12547
682 3GGO NAI 9.12547
683 3GGO ENO 9.12547
684 1YQD NAP 9.12547
685 4RSL FAD 9.12547
686 1PS9 FAD 9.12547
687 3S5W FAD 9.12547
688 5HXI 5HN 9.12547
689 5HXI FAD 9.12547
690 3B20 NAD 9.14454
691 3B1J NAD 9.14454
692 3OZ2 FAD 9.3199
693 3QV1 NAD 9.5057
694 5N2I NAP 9.5057
695 1RM4 NDP 9.5057
696 4URF NAD 9.5057
697 6A3J SOE 9.5057
698 6A3J NAI 9.5057
699 5TS5 FAD 9.5057
700 1GTE FAD 9.5057
701 2DKH 3HB 9.5057
702 2DKH FAD 9.5057
703 4AT0 FAD 9.5057
704 5FEU NAP 9.5057
705 1GEG NAD 9.5057
706 1REO FAD 9.5057
707 5FFF NAP 9.5057
708 2G5C NAD 9.60854
709 3VPH NAD 9.88593
710 5LD5 NAD 9.88593
711 3A06 NDP 9.88593
712 1UWK URO 9.88593
713 1UWK NAD 9.88593
714 1YQZ FAD 9.88593
715 3A06 FOM 9.88593
716 3FWN ATR 9.88593
717 2VVL FAD 9.88593
718 2VVM FAD 9.88593
719 5JY6 NAD 9.88593
720 2GZ3 NAP 9.88593
721 4YSX FAD 10.2564
722 5TOW NAI 10.2662
723 5TOW ADN 10.2662
724 5Z2F NAP 10.2662
725 5JE8 NAD 10.2662
726 6A0S NDP 10.2662
727 6A0S HSE 10.2662
728 2ZXI FAD 10.2662
729 4RL4 PPV 10.2662
730 1EDO NAP 10.2662
731 3AI3 SOL 10.2662
732 3QJ4 FAD 10.2662
733 1UXG FUM 10.356
734 1UXG NAD 10.356
735 2EWM NAD 10.4418
736 5H81 NAP 10.5398
737 1QPR PHT 10.5634
738 2NU8 COA 10.6464
739 3TWO NDP 10.6464
740 3AXB PRO 10.6464
741 5G4L NDP 10.6464
742 4Z0H NAD 10.6464
743 3AXB FAD 10.6464
744 4MIG G3F 10.6464
745 3AD8 NAD 10.6464
746 3AD8 FAD 10.6464
747 3AD8 PYC 10.6464
748 5THQ NDP 10.6464
749 5X9D 80F 10.6464
750 4U8P FDA 10.6464
751 4U8P UDP 10.6464
752 4TSK NDP 10.6464
753 4TQG NDP 10.6464
754 2YVJ NAI 11.0092
755 2YVJ FAD 11.0092
756 1PL6 NAD 11.0266
757 1GZ4 ATP 11.0266
758 4D3F NAP 11.0266
759 3ABI NAD 11.0266
760 1PL6 572 11.0266
761 2CDC XYS 11.0266
762 2CDC XYP 11.0266
763 3UCL NAP 11.0266
764 3UCL CYH 11.0266
765 3UCL FAD 11.0266
766 2CDC NAP 11.0266
767 3QWI CUE 11.1111
768 3QWI NAP 11.1111
769 5OCM NAP 11.4068
770 4II2 ATP 11.4068
771 2DBZ NAP 11.7871
772 3VYW SAM 11.7871
773 2GAG FAD 11.9048
774 2GAG FOA 11.9048
775 2GAG NAD 11.9048
776 1FL2 FAD 11.9355
777 1OMO NAD 12.1673
778 3V1Y NAD 12.1673
779 3NYC FAD 12.1673
780 3NYC IAR 12.1673
781 5X20 NAD 12.1673
782 5N6C NAD 12.1673
783 4EDF UPG 12.1673
784 5OFW 9TW 12.1673
785 4RDH AMP 12.5475
786 4D79 ATP 12.5475
787 4RDI ATP 12.5475
788 1TB4 PEJ 12.5475
789 3K7M FAD 12.5475
790 4KQW NAP 12.5475
791 5EVY FAD 12.5475
792 4JK3 NAD 12.7413
793 4J4H 1J1 12.7413
794 4J4H NAI 12.7413
795 6BII NAP 12.9278
796 5N53 8NB 12.9278
797 5UAV NDP 12.9278
798 5UAV TFB 12.9278
799 4X9M FAD 12.9278
800 4G5H UD7 12.9278
801 4G5H NAP 12.9278
802 2Z3Y F2N 12.9278
803 5EIN NAP 12.963
804 2DT5 NAD 13.2701
805 5ZZ6 ADP 13.308
806 5ZZ6 NAD 13.308
807 4XZ3 COA 13.308
808 4XZ3 ACP 13.308
809 4A0S NAP 13.308
810 5Z2L NDP 13.4694
811 1BW9 NAD 13.6882
812 1C1X NAD 13.6882
813 1HDG NAD 13.6882
814 1BXG NAD 13.6882
815 3NKS FAD 13.6882
816 3RNM FAD 13.7931
817 1I36 NAP 14.0684
818 1K3T BRZ 14.0684
819 2Y6Q I7T 14.0684
820 2Y6Q FAD 14.0684
821 1U3U BNF 14.0684
822 1U3U NAD 14.0684
823 2NVK NAP 14.4487
824 3KB6 NAD 14.4487
825 3B9Q MLI 14.4487
826 2NVK FAD 14.4487
827 5YB7 ORN 14.4487
828 5YB7 FAD 14.4487
829 1I2B USQ 14.4487
830 1I2B UPG 14.4487
831 1I2B NAD 14.4487
832 3LXD FAD 14.8289
833 4YRY FAD 14.8289
834 3O03 NAP 14.8289
835 4YRY NAD 14.8289
836 2YYY NAP 14.8289
837 5EES NAP 14.9798
838 2JHF NAD 15.2091
839 5AOV NAP 15.2091
840 4ZGS NAD 15.5894
841 2Q0L NAP 15.5894
842 1LLU NAD 15.5894
843 2Q0L FAD 15.5894
844 3L9W AMP 15.9696
845 3L9W GSH 15.9696
846 3WLE NAD 16.3498
847 5WQP NAP 16.3498
848 2HQM FAD 17.1103
849 4XQC 13D 18.2509
850 4XQC NAD 18.2509
851 5Z21 NAI 19.0114
852 2VHW NAI 19.0114
853 3CTY FAD 19.0114
854 3SQP FAD 19.7719
855 5DOZ NDP 19.7719
856 4OPC PGT 20.1521
857 4OPC FDA 20.1521
858 4OSP NAP 20.1521
859 6GNA FAD 20.1521
860 3NJ4 AFX 21.2928
861 3NJ4 NAD 21.2928
862 1LUA NAP 22.0532
863 2IXB NAD 22.4335
864 2IXB A2G 22.4335
865 5JCA FAD 23.1939
866 5JCA NDP 23.1939
867 1VKO NAD 23.9544
868 5M67 3D1 24.3346
869 5M67 NAD 24.3346
870 5M67 ADE 24.3346
871 2CDU ADP 24.3346
872 2CDU FAD 24.3346
873 1BDB NAD 26.9962
Pocket No.: 3; Query (leader) PDB : 2EV9; Ligand: NAP; Similar sites found with APoc: 896
This union binding pocket(no: 3) in the query (biounit: 2ev9.bio1) has 33 residues
No: Leader PDB Ligand Sequence Similarity
1 5KK4 44E None
2 3NBC LAT None
3 2ZFZ ARG None
4 5YRF GLC GLC None
5 1NU4 MLA None
6 3PA8 IHP None
7 3RF4 FUN None
8 4CJX NAP 0.760456
9 5A96 GTP 1.20482
10 1YS4 NAP 1.52091
11