Receptor
PDB id Resolution Class Description Source Keywords
2FKW 2.45 Å NON-ENZYME: OTHER STRUCTURE OF LH2 FROM RPS. ACIDOPHILA CRYSTALLIZED IN LIPIDI MESOPHASES RHODOBLASTUS ACIDOPHILUS LIGHT HARVESTING COMPLEX B800-B850 LIPIDIC MESOPHASE CRYSTALLIZATION CUBIC PHASE SPONGE PHASE LDAO RHODOPIN CAROTENOID MEMBRANE PROTEIN PHOTOSYNTHESIS
Ref.: ROOM TO MOVE: CRYSTALLIZING MEMBRANE PROTEINS IN SW LIPIDIC MESOPHASES J.MOL.BIOL. V. 357 1605 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BCL A:1501;
A:1701;
B:1601;
C:1502;
C:1702;
D:1602;
E:1503;
E:1703;
F:1603;
G:1504;
G:1704;
H:1604;
I:1505;
I:1705;
J:1605;
K:1506;
K:1706;
L:1606;
M:1507;
M:1707;
N:1607;
O:1508;
O:1708;
P:1608;
R:1509;
R:1709;
S:1609;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
911.504 C55 H74 Mg N4 O6 CC[C@...
LDA A:1816;
A:1817;
B:1801;
C:1815;
C:1821;
D:1802;
E:1822;
E:1823;
F:1803;
G:1814;
G:1824;
H:1804;
I:1812;
I:1813;
I:1825;
J:1805;
K:1810;
K:1826;
L:1806;
M:1811;
M:1827;
N:1807;
O:1820;
P:1808;
R:1809;
R:1818;
R:1819;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
229.402 C14 H31 N O CCCCC...
RG1 D:1402;
F:1403;
H:1404;
J:1405;
L:1406;
N:1407;
P:1408;
R:1401;
S:1409;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
715.013 C46 H66 O6 CC(=C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2FKW 2.45 Å NON-ENZYME: OTHER STRUCTURE OF LH2 FROM RPS. ACIDOPHILA CRYSTALLIZED IN LIPIDI MESOPHASES RHODOBLASTUS ACIDOPHILUS LIGHT HARVESTING COMPLEX B800-B850 LIPIDIC MESOPHASE CRYSTALLIZATION CUBIC PHASE SPONGE PHASE LDAO RHODOPIN CAROTENOID MEMBRANE PROTEIN PHOTOSYNTHESIS
Ref.: ROOM TO MOVE: CRYSTALLIZING MEMBRANE PROTEINS IN SW LIPIDIC MESOPHASES J.MOL.BIOL. V. 357 1605 2006
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 2FKW - RG1 C46 H66 O6 CC(=C/C=C/....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 2FKW - RG1 C46 H66 O6 CC(=C/C=C/....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 2FKW - RG1 C46 H66 O6 CC(=C/C=C/....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: RG1; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 RG1 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2FKW; Ligand: RG1; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2fkw.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 2FKW; Ligand: RG1; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2fkw.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2FKW; Ligand: RG1; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2fkw.bio1) has 28 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2FKW; Ligand: RG1; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2fkw.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2FKW; Ligand: RG1; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 2fkw.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 2FKW; Ligand: RG1; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 2fkw.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 2FKW; Ligand: RG1; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 2fkw.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 2FKW; Ligand: RG1; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 2fkw.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 2FKW; Ligand: RG1; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 2fkw.bio1) has 27 residues
No: Leader PDB Ligand Sequence Similarity
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