Receptor
PDB id Resolution Class Description Source Keywords
2GND 2.25 Å NON-ENZYME: BINDING ONE HOUR EDTA TREATMENT, P. ANGOLENSIS LECTIN PTEROCARPUS ANGOLENSIS LEGUME LECTIN METAL-FREE LECTIN EDTA TREATMENT SUGAR COMPLEX MANNOSE BETA SANDWICH SUGAR BINDING PROTEIN
Ref.: INTERPLAY BETWEEN METAL BINDING AND CIS/TRANS ISOMERIZATION IN LEGUME LECTINS: STRUCTURAL AND THERMODYNAMIC STUDY OF P. ANGOLENSIS LECTIN. J.MOL.BIOL. V. 361 153 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CA A:256;
B:254;
Part of Protein;
Part of Protein;
none;
none;
submit data
40.078 Ca [Ca+2...
MAN B:253;
Valid;
none;
submit data
180.156 C6 H12 O6 C([C@...
MAN MMA A:253;
Valid;
none;
submit data
356.324 n/a O1C(O...
MN A:255;
B:255;
Part of Protein;
Part of Protein;
none;
none;
submit data
54.938 Mn [Mn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2GND 2.25 Å NON-ENZYME: BINDING ONE HOUR EDTA TREATMENT, P. ANGOLENSIS LECTIN PTEROCARPUS ANGOLENSIS LEGUME LECTIN METAL-FREE LECTIN EDTA TREATMENT SUGAR COMPLEX MANNOSE BETA SANDWICH SUGAR BINDING PROTEIN
Ref.: INTERPLAY BETWEEN METAL BINDING AND CIS/TRANS ISOMERIZATION IN LEGUME LECTINS: STRUCTURAL AND THERMODYNAMIC STUDY OF P. ANGOLENSIS LECTIN. J.MOL.BIOL. V. 361 153 2006
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 473 families.
1 2GND - MAN C6 H12 O6 C([C@@H]1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 355 families.
1 2GND - MAN C6 H12 O6 C([C@@H]1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 272 families.
1 2GND - MAN C6 H12 O6 C([C@@H]1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: MAN; Similar ligands found: 141
No: Ligand ECFP6 Tc MDL keys Tc
1 GAL 1 1
2 BMA 1 1
3 GXL 1 1
4 GLA 1 1
5 ALL 1 1
6 GLC 1 1
7 BGC 1 1
8 GIV 1 1
9 MAN 1 1
10 WOO 1 1
11 32O 0.653846 0.866667
12 RIB 0.653846 0.866667
13 FUB 0.653846 0.866667
14 Z6J 0.653846 0.866667
15 AHR 0.653846 0.866667
16 BMA BMA MAN 0.545455 0.823529
17 GLA BGC 0.511628 0.848485
18 LAK 0.511628 0.848485
19 BGC GLA 0.511628 0.848485
20 GLA BMA 0.511628 0.848485
21 MAN BMA 0.511628 0.848485
22 GLA GLC 0.511628 0.848485
23 GAL GAL 0.511628 0.848485
24 MLB 0.511628 0.848485
25 BMA GLA 0.511628 0.848485
26 BMA BMA BMA BMA BMA BMA MAN 0.5 0.823529
27 YDR 0.5 0.8
28 MAN BMA BMA BMA BMA BMA 0.5 0.823529
29 GLC GLC GLC GLC BGC 0.488889 0.848485
30 GLC GLC GLC 0.488889 0.848485
31 MAN MAN MAN 0.488889 0.848485
32 GLC GLC GLC GLC GLC BGC 0.488889 0.848485
33 BGP 0.461538 0.675
34 G6P 0.461538 0.675
35 M6P 0.461538 0.675
36 A6P 0.461538 0.675
37 M6D 0.461538 0.675
38 BG6 0.461538 0.675
39 SHG 0.457143 0.875
40 GAF 0.457143 0.875
41 G2F 0.457143 0.875
42 X6X 0.457143 0.777778
43 2FG 0.457143 0.875
44 G3F 0.457143 0.875
45 PA1 0.457143 0.777778
46 1GN 0.457143 0.777778
47 GCS 0.457143 0.777778
48 2H5 0.457143 0.875
49 LB2 0.454545 0.848485
50 BGC BMA 0.454545 0.848485
51 BGC GAL 0.454545 0.848485
52 MAL 0.454545 0.848485
53 GLC GAL 0.454545 0.848485
54 M3M 0.454545 0.848485
55 GLA GAL 0.454545 0.848485
56 MAB 0.454545 0.848485
57 GLC BGC 0.454545 0.848485
58 BMA BMA 0.454545 0.848485
59 LBT 0.454545 0.848485
60 MAL MAL 0.454545 0.823529
61 CBK 0.454545 0.848485
62 GLA GLA 0.454545 0.848485
63 MAN GLC 0.454545 0.848485
64 CBI 0.454545 0.848485
65 N9S 0.454545 0.848485
66 GAL GLC 0.454545 0.848485
67 BMA GAL 0.454545 0.848485
68 B2G 0.454545 0.848485
69 BGC GLC 0.454545 0.848485
70 LAT 0.454545 0.848485
71 GAL BGC 0.454545 0.848485
72 3MG 0.444444 0.875
73 TCB 0.444444 0.8
74 GLC SGC 0.444444 0.8
75 YIO 0.441176 0.870968
76 2GS 0.432432 0.875
77 BGC BGC 0.431818 0.848485
78 2M4 0.431818 0.848485
79 MAN MAN 0.431818 0.848485
80 AHR AHR 0.428571 0.764706
81 GLF 0.428571 0.84375
82 FUB AHR 0.428571 0.764706
83 CT3 0.416667 0.848485
84 GLC BGC GLC 0.416667 0.848485
85 MLR 0.416667 0.848485
86 GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
87 GLC GLC GLC GLC GLC 0.416667 0.848485
88 GAL FUC 0.416667 0.848485
89 BMA BMA BMA 0.416667 0.848485
90 CTR 0.416667 0.848485
91 BGC GLC GLC 0.416667 0.848485
92 BGC GLC GLC GLC GLC 0.416667 0.848485
93 MAN MAN BMA BMA BMA BMA 0.416667 0.848485
94 GLC GAL GAL 0.416667 0.848485
95 B4G 0.416667 0.848485
96 CEX 0.416667 0.848485
97 MAN BMA BMA BMA BMA 0.416667 0.848485
98 BMA BMA BMA BMA BMA 0.416667 0.848485
99 GLC BGC BGC BGC BGC BGC 0.416667 0.848485
100 CTT 0.416667 0.848485
101 GLC GLC BGC 0.416667 0.848485
102 DXI 0.416667 0.848485
103 GLC GLC BGC GLC GLC GLC GLC 0.416667 0.848485
104 BGC GLC GLC GLC 0.416667 0.848485
105 BGC BGC BGC GLC 0.416667 0.848485
106 BGC BGC BGC BGC BGC BGC 0.416667 0.848485
107 BMA BMA BMA BMA BMA BMA 0.416667 0.848485
108 MTT 0.416667 0.848485
109 BMA MAN BMA 0.416667 0.848485
110 BGC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
111 CE5 0.416667 0.848485
112 GAL GAL GAL 0.416667 0.848485
113 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.416667 0.848485
114 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
115 GLA GAL GLC 0.416667 0.848485
116 CE6 0.416667 0.848485
117 GLC BGC BGC BGC BGC 0.416667 0.848485
118 GLC BGC BGC 0.416667 0.848485
119 MAN BMA BMA 0.416667 0.848485
120 MT7 0.416667 0.848485
121 GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
122 CE8 0.416667 0.848485
123 CEY 0.416667 0.848485
124 BGC BGC BGC 0.408163 0.848485
125 BGC BGC BGC BGC BGC 0.408163 0.848485
126 GLC BGC BGC BGC BGC BGC BGC 0.408163 0.848485
127 SGC SGC BGC 0.408163 0.8
128 GLC BGC BGC BGC 0.408163 0.848485
129 BGC BGC BGC ASO BGC BGC ASO 0.408163 0.848485
130 BGC BGC BGC GLC BGC BGC 0.408163 0.848485
131 TRE 0.405405 0.848485
132 1LL 0.405405 0.771429
133 TDG 0.405405 0.771429
134 BM3 0.404762 0.7
135 NDG 0.404762 0.7
136 NAG 0.404762 0.7
137 HSQ 0.404762 0.7
138 A2G 0.404762 0.7
139 NGA 0.404762 0.7
140 FUB AHR AHR 0.4 0.764706
141 AHR AHR AHR 0.4 0.764706
Ligand no: 2; Ligand: MAN MMA; Similar ligands found: 83
No: Ligand ECFP6 Tc MDL keys Tc
1 MAN MMA 1 1
2 MAN MMA MAN 0.666667 1
3 GLC GLC GLC GLC BGC 0.666667 0.942857
4 MAN MAN MAN 0.666667 0.942857
5 GLC GLC GLC 0.666667 0.942857
6 GLC GLC GLC GLC GLC BGC 0.666667 0.942857
7 GLA GLC 0.66 0.942857
8 GLA BMA 0.66 0.942857
9 GAL GAL 0.66 0.942857
10 GLA BGC 0.66 0.942857
11 MLB 0.66 0.942857
12 BGC GLA 0.66 0.942857
13 LAK 0.66 0.942857
14 BMA GLA 0.66 0.942857
15 MAN BMA 0.66 0.942857
16 AMG 0.651163 0.914286
17 GYP 0.651163 0.914286
18 MMA 0.651163 0.914286
19 MBG 0.651163 0.914286
20 WZ2 0.612903 0.921053
21 WZ3 0.569231 0.972222
22 AHR AHR 0.56 0.810811
23 FUB AHR 0.56 0.810811
24 FUB AHR AHR 0.557692 0.810811
25 AHR AHR AHR 0.557692 0.810811
26 GLC GLC GLC GLC 0.557377 0.942857
27 MAN H1M MAN 0.553846 0.921053
28 FRU GLC GLA 0.53125 0.846154
29 RAF 0.53125 0.846154
30 GLC GLC GLC BGC 0.523077 0.942857
31 NGB 0.522388 0.6
32 AXR BXY BXY BXX 0.514706 0.842105
33 MAN MAN BMA MAN 0.507692 0.942857
34 MAN MAN MAN MAN 0.507692 0.942857
35 4CQ 0.5 0.916667
36 WZ5 0.493827 0.744681
37 SUC GLA 0.485714 0.846154
38 DEG 0.481481 0.775
39 M5S 0.477612 0.942857
40 MAN BMA MAN MAN MAN 0.477612 0.942857
41 DR5 0.473684 1
42 MMA MAN 0.473684 1
43 GLC GLC GLC GLC GLC GLC 0.469697 0.942857
44 IFM MAN 0.467742 0.711111
45 NAG BMA MAN MAN MAN MAN MAN 0.466667 0.921053
46 RGG 0.462963 0.833333
47 HEX GLC 0.45614 0.72093
48 BHG 0.45614 0.72093
49 GLC HEX 0.45614 0.72093
50 JZR 0.45614 0.72093
51 NOJ BGC 0.451613 0.695652
52 DMJ MAN 0.451613 0.695652
53 B7G 0.448276 0.744186
54 MDM 0.448276 1
55 M13 0.448276 1
56 KGM 0.448276 0.744186
57 GAL MBG 0.448276 1
58 GLA MBG 0.446429 1
59 3PV 0.444444 0.7
60 HSJ 0.440678 0.744186
61 BNG 0.440678 0.744186
62 BOG 0.440678 0.744186
63 DGD 0.439024 0.73913
64 EBQ 0.438596 0.794872
65 EBG 0.438596 0.794872
66 TRE 0.428571 0.942857
67 BMA BMA GLA BMA BMA 0.428571 0.942857
68 AXR BXY BXY BXY BXX BXX 0.425 0.8
69 HNV 0.41791 0.825
70 1GN ACY GAL ACY 1GN BGC GAL BGC 0.416667 0.693878
71 ACY 1GN GAL 1GN BGC ACY GAL BGC 0.416667 0.693878
72 SER MAN 0.416667 0.738095
73 GL1 0.415094 0.666667
74 M1P 0.415094 0.666667
75 G1P 0.415094 0.666667
76 XGP 0.415094 0.666667
77 FK9 0.412698 0.704545
78 J7Z 0.406593 0.755556
79 XNS 0.402985 0.785714
80 DR4 0.402985 0.785714
81 MAN MAN MAN BMA MAN MAN MAN 0.402439 1
82 T6P 0.4 0.733333
83 MAN MAN MAN BMA MAN 0.4 0.942857
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2GND; Ligand: MAN; Similar sites found: 185
This union binding pocket(no: 1) in the query (biounit: 2gnd.bio1) has 12 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1HN4 MJI 0.03686 0.4313 None
2 2J9C ATP 0.02108 0.41362 None
3 1V2X SAM 0.02249 0.40415 1.03093
4 4RDN 6MD 0.005647 0.42047 1.1976
5 5OFW 9TW 0.01063 0.40005 1.34529
6 3CTY FAD 0.04296 0.41784 1.5674
7 1L1Q 9DA 0.01113 0.41776 1.6129
8 3KLJ FAD 0.0065 0.45628 1.98413
9 3PC3 P1T 0.01102 0.4215 1.98413
10 3RFV NAI 0.04878 0.42076 1.98413
11 3G5S FAD 0.04044 0.4117 1.98413
12 3GBR PRP 0.03854 0.40473 2.31884
13 3SQP FAD 0.009422 0.49567 2.38095
14 4M52 FAD 0.01002 0.44619 2.38095
15 1V7C HEY 0.01734 0.42289 2.38095
16 5DEP UD1 0.04065 0.41437 2.38095
17 4IMG NGF 0.01738 0.41293 2.38095
18 5L4S NAP 0.04164 0.41128 2.38095
19 5L4S 6KX 0.04164 0.41128 2.38095
20 3QFU ADP 0.01499 0.41069 2.38095
21 2PT9 2MH 0.0463 0.40453 2.38095
22 2PT9 S4M 0.03182 0.40453 2.38095
23 2I7C AAT 0.04893 0.40405 2.38095
24 1PA9 CSN 0.01935 0.40166 2.38095
25 4CTA ATP 0.03621 0.40126 2.38095
26 2NVK FAD 0.003834 0.46948 2.77778
27 5TTJ FAD 0.005173 0.46272 2.77778
28 1V59 FAD 0.005425 0.46206 2.77778
29 3AYI HCI 0.03442 0.42584 2.77778
30 3AYI FAD 0.03352 0.42584 2.77778
31 3Q9T FAY 0.02611 0.4218 2.77778
32 3RNM FAD 0.04747 0.41378 2.77778
33 1DQS NAD 0.04869 0.40893 2.77778
34 1ZBQ NAD 0.04493 0.40445 2.77778
35 4FG8 ATP 0.03004 0.40102 2.77778
36 1L3I SAH 0.0348 0.4001 2.77778
37 5THQ NDP 0.02512 0.4164 2.94118
38 2CUL FAD 0.04555 0.40739 3.01724
39 3P2E SAH 0.006213 0.43716 3.11111
40 1I9G SAM 0.003421 0.44457 3.1746
41 1FL2 FAD 0.01767 0.42829 3.1746
42 4XTX 590 0.02762 0.41314 3.1746
43 1US5 GLU 0.0164 0.40271 3.1746
44 1A59 COA 0.02704 0.40143 3.1746
45 2Z6J FMN 0.04096 0.40126 3.1746
46 5TQZ GLC 0.000000263 0.60437 3.33333
47 1HXD BTN 0.003989 0.44751 3.57143
48 5BVA FAD 0.03439 0.42026 3.57143
49 1DJN ADP 0.01739 0.41762 3.57143
50 2Z3Y F2N 0.04102 0.41383 3.57143
51 1SOW NAD 0.04262 0.40438 3.57143
52 5F1X ATP 0.04079 0.40366 3.57143
53 2B9W FAD 0.0116 0.45621 3.96825
54 1RP0 AHZ 0.02765 0.41657 3.96825
55 1WMA NDP 0.04615 0.41529 3.96825
56 1WMA AB3 0.04615 0.41529 3.96825
57 4N49 SAM 0.01895 0.41078 3.96825
58 1LW4 TLP 0.0202 0.40377 3.96825
59 4GKV NAD 0.04932 0.40269 3.96825
60 2WOJ ADP ALF 0.04327 0.40047 3.96825
61 2Q0L FAD 0.0006134 0.51962 4.36508
62 2YG3 FAD 0.01302 0.43953 4.36508
63 4ZCC FAD 0.02413 0.43294 4.36508
64 4ZCC NAI 0.02482 0.43294 4.36508
65 2R4J 13P 0.03291 0.42979 4.36508
66 2YVF FAD 0.04353 0.42743 4.36508
67 2YVF NAD 0.04452 0.42743 4.36508
68 2GQT FAD 0.04071 0.42549 4.36508
69 2CUN 3PG 0.001087 0.42305 4.36508
70 3KJS DQ1 0.0275 0.41935 4.36508
71 2Q2V NAD 0.02896 0.4132 4.36508
72 2GCG NDP 0.0311 0.4129 4.36508
73 2X3N FAD 0.03594 0.41237 4.36508
74 3O26 NDP 0.03522 0.40916 4.36508
75 5LJW ANP 0.01712 0.40889 4.36508
76 1KYQ NAD 0.01771 0.40578 4.37956
77 3LDQ 3P1 0.01491 0.4153 4.38596
78 1GET NAP 0.005854 0.47815 4.7619
79 1GET FAD 0.005582 0.47815 4.7619
80 4H4D 10E 0.0008134 0.4684 4.7619
81 1RSG FAD 0.0172 0.43571 4.7619
82 1YY5 FAD 0.02232 0.43052 4.7619
83 5KMS FAD 0.0208 0.42683 4.7619
84 1FEC FAD 0.03702 0.42151 4.7619
85 3MB5 SAM 0.01344 0.41523 4.7619
86 4PVR ASP 0.014 0.41478 4.7619
87 1PS9 FAD 0.03623 0.4133 4.7619
88 4B9Q ATP 0.01859 0.41248 4.7619
89 2PWY SAH 0.02476 0.40186 4.7619
90 1TPY SAH 0.03457 0.40007 4.7619
91 4A3U FMN 0.03101 0.40005 4.7619
92 2QWO ADP 0.02638 0.40646 4.82234
93 2RAB NAD 0.004853 0.48211 5.15873
94 2RAB FAD 0.002741 0.48211 5.15873
95 1QO8 FAD 0.008634 0.45554 5.15873
96 5BR7 FAD 0.02859 0.43612 5.15873
97 3MAX LLX 0.02064 0.41422 5.15873
98 1X7D ORN 0.03321 0.41334 5.15873
99 1LYX PGA 0.01249 0.41282 5.15873
100 1X7D NAD 0.02623 0.41045 5.15873
101 3CB2 GDP 0.01807 0.40496 5.15873
102 1H82 GZZ 0.03336 0.42984 5.55556
103 1H82 FAD 0.02958 0.42984 5.55556
104 5MBX FAD 0.03735 0.42391 5.55556
105 5MBX SP5 0.03735 0.42391 5.55556
106 1IIM TTP 0.02831 0.41814 5.55556
107 1E1O LYS 0.02499 0.40927 5.55556
108 4M0F 1YK 0.03597 0.40926 5.55556
109 1YKF NAP 0.04901 0.40204 5.55556
110 3GD4 FAD 0.04703 0.42325 5.95238
111 1DL5 SAH 0.02061 0.41738 5.95238
112 2V7Y ADP 0.01641 0.41013 5.95238
113 1OFD FMN 0.04507 0.40951 5.95238
114 1OFD AKG 0.04158 0.40951 5.95238
115 1F3L SAH 0.02403 0.4087 5.95238
116 5UWO GNP 0.03999 0.40194 6.32911
117 3RIY NAD 0.02554 0.41154 6.34921
118 4YDU ADP 0.02101 0.41141 6.34921
119 2XVF FAD 0.04201 0.40625 6.34921
120 2JK0 ASP 0.01034 0.40269 6.34921
121 3LL2 MAN MAN MAN MAN MAN MAN MAN MAN 0.00002994 0.54459 6.50407
122 2GUC MAN 0.00000002678 0.68823 6.55738
123 2GUD MAN 0.00000003411 0.54838 6.55738
124 2NU5 NAG 0.00000003803 0.54705 6.55738
125 2HYR BGC GLC 0.00000005515 0.54092 6.55738
126 2NUO BGC 0.0000002243 0.51905 6.55738
127 2HYQ MAN MAN 0.000001414 0.51831 6.55738
128 2GUD BMA 0.0000004018 0.51071 6.55738
129 2GUE NAG 0.0000006855 0.47258 6.55738
130 3LZW FAD 0.04477 0.40894 6.62651
131 5U97 PIT 0.0118 0.43352 6.74603
132 1XAJ CRB 0.03126 0.42156 6.74603
133 1XAJ NAD 0.03126 0.42156 6.74603
134 4MO2 FDA 0.03293 0.41343 6.74603
135 4BFM ANP 0.02009 0.40945 6.74603
136 1REO FAD 0.04404 0.40705 6.74603
137 3VY6 BGC BGC 0.0000002055 0.5188 7.0922
138 1D4D FAD 0.007468 0.46047 7.14286
139 1E5Q NDP 0.03672 0.40293 7.14286
140 3Q87 SAM 0.006075 0.43863 7.2
141 3QV1 NAD 0.03637 0.40042 7.31707
142 3LAD FAD 0.006968 0.4529 7.53968
143 4Z24 FAD 0.03311 0.41888 7.53968
144 3H8V ATP 0.01315 0.41424 7.53968
145 4JBI NDP 0.02984 0.4097 7.53968
146 4OHB 5HM 0.01363 0.41299 7.89474
147 2Q7V FAD 0.002723 0.47659 7.93651
148 4C3Y FAD 0.0178 0.43252 7.93651
149 4C3Y ANB 0.02857 0.42641 7.93651
150 5BW4 SAM 0.01168 0.41561 7.93651
151 2YVJ FAD 0.03126 0.41956 8.25688
152 1UM0 FMN 0.00759 0.43625 8.33333
153 1NVM NAD 0.02489 0.41788 8.33333
154 3IHG FAD 0.04538 0.40019 8.33333
155 1SW0 PGA 0.00897 0.41419 8.46774
156 4J5R A1R 0.02535 0.40955 8.90411
157 4N1T 2GD 0.0408 0.40711 9.43396
158 2GVC FAD 0.01872 0.4254 9.52381
159 3VC3 C6P 0.0189 0.41403 9.52381
160 4RPL 3UC 0.02195 0.44605 9.92064
161 4RPL FAD 0.02632 0.43975 9.92064
162 1NV8 SAM 0.01668 0.42401 10.7143
163 1NV8 MEQ 0.01583 0.42401 10.7143
164 5EYP GTP 0.0018 0.47229 11.1111
165 3RYC GTP 0.006691 0.44532 11.1111
166 4LNU GTP 0.01528 0.41826 11.1111
167 2HQM FAD 0.0006568 0.51732 11.5079
168 2VVL FAD 0.003479 0.47579 11.5079
169 2VVM FAD 0.004305 0.46969 11.5079
170 2GAG NAD 0.01544 0.43435 12.3016
171 4W6Z 8ID 0.03357 0.41466 12.3016
172 5ODQ FAD 0.007229 0.45519 12.8571
173 4POO SAM 0.01404 0.42176 13.4921
174 3R51 MMA 0.0005979 0.41756 13.75
175 4D7E FAD 0.03237 0.41399 14.2857
176 1VPE ANP 0.03054 0.40499 14.2857
177 4FWE FAD 0.01326 0.44367 14.6825
178 4HSU FAD 0.01651 0.43846 14.6825
179 4GUT FAD 0.01945 0.43564 14.6825
180 4J56 FAD 0.002938 0.47999 18.4211
181 2DUR MAN MAN 0.00001053 0.51349 19.8413
182 4ZNO SUC 0.000004679 0.50003 21.0317
183 2F5Z FAD 0.02573 0.4197 25
184 5ITZ GTP 0.001442 0.47786 27.907
185 5EIB GTP 0.01223 0.42448 30.4348
Pocket No.: 2; Query (leader) PDB : 2GND; Ligand: MAN MMA; Similar sites found: 107
This union binding pocket(no: 2) in the query (biounit: 2gnd.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1HN4 MJI 0.0365 0.43096 None
2 1V84 UDP 0.01335 0.40155 1.19048
3 3CTY FAD 0.02525 0.42841 1.5674
4 1K97 ASP 0.02526 0.42217 1.5873
5 1K97 CIR 0.02526 0.42217 1.5873
6 1L1Q 9DA 0.01727 0.41053 1.6129
7 4AT0 FAD 0.02617 0.42992 1.98413
8 1S7G NAD 0.03242 0.40999 1.98413
9 2IHT TPP 0.03022 0.40545 1.98413
10 3SQP FAD 0.01818 0.47833 2.38095
11 3TKI S25 0.02575 0.43182 2.38095
12 4HA6 FAD 0.04246 0.41496 2.38095
13 1WG8 SAM 0.02632 0.4043 2.38095
14 5TUK FAD 0.03985 0.40162 2.38095
15 1V59 FAD 0.009955 0.45175 2.77778
16 5TTJ FAD 0.02228 0.42707 2.77778
17 1I9G SAM 0.005761 0.4368 3.1746
18 1FL2 FAD 0.02006 0.42957 3.1746
19 3A7R LAQ 0.02075 0.42483 3.1746
20 5TQZ GLC 0.0000009597 0.53997 3.33333
21 5J7X FAD 0.03072 0.41844 3.57143
22 1O94 AMP 0.0115 0.41781 3.57143
23 1R6U TYM 0.03021 0.40408 3.57143
24 1Q0R AKT 0.02434 0.40285 3.57143
25 2B9W FAD 0.02941 0.43203 3.96825
26 1RP0 AHZ 0.01831 0.42451 3.96825
27 2Q0L FAD 0.001973 0.48676 4.36508
28 1WDK NAD 0.02855 0.40394 4.36508
29 2D1S SLU 0.04242 0.40253 4.36508
30 3ZEU ADP 0.008747 0.42387 4.45104
31 3ZEU AGS 0.02922 0.40037 4.45104
32 3MYU VIB 0.006749 0.40541 4.65116
33 1GET NAP 0.01036 0.46491 4.7619
34 4H4D 10E 0.002406 0.44335 4.7619
35 3MB5 SAM 0.02476 0.40719 4.7619
36 5BO9 CSF 0.02999 0.40282 4.7619
37 5BO9 SIA GAL NGS 0.0459 0.40179 4.7619
38 3CU0 GAL GAL SO4 0.0491 0.40128 4.7619
39 3BY8 MLT 0.01056 0.40584 4.92958
40 2RAB NAD 0.007708 0.47108 5.15873
41 2RAB FAD 0.004296 0.47108 5.15873
42 4YNU LGC 0.02312 0.4337 5.15873
43 5BR7 FAD 0.0368 0.42958 5.15873
44 3ZBQ GDP 0.01317 0.41659 5.15873
45 3MAX LLX 0.02623 0.40732 5.15873
46 1X7D NAD 0.03935 0.40312 5.15873
47 1Q9I TEO 0.01042 0.45834 5.55556
48 4USR FAD 0.01062 0.43839 5.55556
49 4BV6 FAD 0.01915 0.43251 5.95238
50 3GD4 FAD 0.04623 0.42202 5.95238
51 1OFD FMN 0.02406 0.42133 5.95238
52 1OLS TDP 0.04399 0.41489 5.95238
53 1OFD AKG 0.04221 0.40593 5.95238
54 3HVJ 705 0.04867 0.40646 6.33484
55 3IES M24 0.032 0.41354 6.34921
56 2XVF FAD 0.03726 0.41288 6.34921
57 1IXE COA 0.02584 0.40151 6.34921
58 3LL2 MAN MAN MAN MAN MAN MAN MAN MAN 0.001144 0.45937 6.50407
59 2GUC MAN 0.00000006522 0.65649 6.55738
60 2GUD MAN 0.00000008459 0.50109 6.55738
61 2NU5 NAG 0.00000008607 0.50081 6.55738
62 2HYR BGC GLC 0.0000001287 0.4958 6.55738
63 2NUO BGC 0.000000587 0.47675 6.55738
64 2HYQ MAN MAN 0.000003365 0.47656 6.55738
65 2GUD BMA 0.000001048 0.46928 6.55738
66 2GUE NAG 0.000001669 0.43925 6.55738
67 2XVE FAD 0.0459 0.42401 6.74603
68 4REP FAD 0.03038 0.41963 6.74603
69 4MO2 FDA 0.04012 0.41111 6.74603
70 5U97 PIT 0.03594 0.40524 6.74603
71 3EWP APR 0.0276 0.40615 6.77966
72 3VY6 BGC BGC 0.0000005822 0.47678 7.0922
73 1FFU FAD 0.01838 0.42873 7.14286
74 3Q87 SAM 0.007007 0.43577 7.2
75 3LAD FAD 0.009286 0.45077 7.53968
76 1VBH PEP 0.02796 0.40585 7.53968
77 2A9G ARG 0.01293 0.40224 7.89474
78 2Q7V FAD 0.005549 0.46213 7.93651
79 4C3Y FAD 0.009997 0.44808 7.93651
80 4C3Y ANB 0.01543 0.44198 7.93651
81 4CFP NAG AMU NAG AMV 0.01479 0.42182 7.93651
82 5T2Z 017 0.02332 0.41531 8.08081
83 2JFQ DGL 0.01435 0.40248 8.33333
84 4TUO SIA GAL SIA GLC NGA 0.01857 0.41219 8.41121
85 1SW0 PGA 0.01355 0.40604 8.46774
86 1XXA ARG 0.01039 0.4042 8.97436
87 2X6T NAP 0.03812 0.40504 9.12698
88 1NV8 MEQ 0.02799 0.40983 10.7143
89 1NV8 SAM 0.02952 0.40983 10.7143
90 5LXT GTP 0.01225 0.46129 11.1111
91 4LNU GTP 0.004087 0.45261 11.1111
92 5EYP GTP 0.00412 0.45243 11.1111
93 3RYC GDP 0.03005 0.4042 11.1111
94 2HQM FAD 0.001542 0.49365 11.5079
95 2VVM FAD 0.02053 0.42995 11.5079
96 2VVL FAD 0.03615 0.4172 11.5079
97 1N4W FAD 0.03883 0.41713 11.9048
98 2GAG NAD 0.03483 0.4145 12.3016
99 5ODQ FAD 0.02236 0.42967 12.8571
100 4HSU FAD 0.04775 0.41288 14.6825
101 4J56 FAD 0.007153 0.45884 18.4211
102 2DUR MAN MAN 0.00001629 0.47138 19.8413
103 2P3C 3TL 0.03052 0.41766 20.202
104 4ZNO SUC 0.000008338 0.46316 21.0317
105 5ITZ GTP 0.003101 0.45891 27.907
106 5ITZ GDP 0.03222 0.40118 27.907
107 5EIB GTP 0.005192 0.44716 30.4348
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