Receptor
PDB id Resolution Class Description Source Keywords
2GSP 1.8 Å EC: 3.1.27.3 RIBONUCLEASE T1/2',3'-CGPS AND 3'-GMP, 2 DAYS ASPERGILLUS ORYZAE HYDROLASE ENDORIBONUCLEASE
Ref.: HYDROLYSIS OF A SLOW CYCLIC THIOPHOSPHATE SUBSTRATE T1 ANALYZED BY TIME-RESOLVED CRYSTALLOGRAPHY. NAT.STRUCT.BIOL. V. 5 280 1998
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
3GP A:106;
Valid;
none;
submit data
363.221 C10 H14 N5 O8 P c1nc2...
CA A:107;
Part of Protein;
none;
submit data
40.078 Ca [Ca+2...
SGP A:105;
Valid;
none;
submit data
361.271 C10 H12 N5 O6 P S c1nc2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1RNT 1.9 Å EC: 3.1.27.3 RESTRAINED LEAST-SQUARES REFINEMENT OF THE CRYSTAL STRUCTURE RIBONUCLEASE T1(ASTERISK)2(PRIME)-GUANYLIC ACID COMPLEX AT A NGSTROMS RESOLUTION ASPERGILLUS ORYZAE HYDROLASE(ENDORIBONUCLEASE)
Ref.: RESTRAINED LEAST-SQUARES REFINEMENT OF THE CRYSTAL OF THE RIBONUCLEASE T1(ASTERISK)2(PRIME)-GUANYLIC A COMPLEX AT 1.9 ANGSTROMS RESOLUTION ACTA CRYSTALLOGR.,SECT.B V. 43 548 1987
Members (54)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 6GSP - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
2 1TRP - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
3 5GSP - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
4 7RNT - 2AM C10 H14 N5 O7 P c1nc(c2c(n....
5 1FYS - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
6 1LOV - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
7 6RNT Kd = 4.3 mM 2AM C10 H14 N5 O7 P c1nc(c2c(n....
8 1RGA - G C10 H14 N5 O8 P c1nc2c(n1[....
9 1RLS - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
10 1LOW - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
11 1I2F - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
12 1DET Kd = 50 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
13 1HZ1 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
14 5BIR Kd = 255 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
15 1FZU - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
16 1B2M - G U34 n/a n/a
17 1BVI - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
18 1I2E - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
19 1G02 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
20 1BIR Kd = 138 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
21 1RNT Kd = 6.5 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
22 3BIR Kd = 112 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
23 1CH0 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
24 1I3I - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
25 4GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
26 2AAD - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
27 5HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
28 3BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
29 3SYU Kd = 50 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
30 1I0V - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
31 1RHL - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
32 1I2G - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
33 1I0X - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
34 1RGK Kd = 49.1 uM 2AM C10 H14 N5 O7 P c1nc(c2c(n....
35 1I3F - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
36 1LRA - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
37 4HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
38 2RNT - GPG C20 H25 N10 O12 P c1nc2c(n1[....
39 2BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
40 5BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
41 2BIR - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
42 1RGC - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
43 1GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
44 2HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
45 1HYF - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
46 7GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
47 3GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
48 3HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
49 1LOY - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
50 1BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
51 2GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
52 1RGL Kd = 37 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
53 1TRQ - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
54 4BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
70% Homology Family (57)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 6GSP - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
2 1TRP - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
3 5GSP - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
4 7RNT - 2AM C10 H14 N5 O7 P c1nc(c2c(n....
5 1FYS - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
6 1LOV - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
7 6RNT Kd = 4.3 mM 2AM C10 H14 N5 O7 P c1nc(c2c(n....
8 1RGA - G C10 H14 N5 O8 P c1nc2c(n1[....
9 1RLS - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
10 1LOW - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
11 1I2F - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
12 1DET Kd = 50 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
13 1HZ1 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
14 5BIR Kd = 255 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
15 1FZU - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
16 1B2M - G U34 n/a n/a
17 1BVI - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
18 1I2E - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
19 1G02 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
20 1BIR Kd = 138 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
21 1RNT Kd = 6.5 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
22 3BIR Kd = 112 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
23 1CH0 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
24 1I3I - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
25 4GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
26 2AAD - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
27 5HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
28 3BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
29 3SYU Kd = 50 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
30 1I0V - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
31 1RHL - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
32 1I2G - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
33 1I0X - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
34 1RGK Kd = 49.1 uM 2AM C10 H14 N5 O7 P c1nc(c2c(n....
35 1I3F - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
36 1LRA - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
37 4HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
38 2RNT - GPG C20 H25 N10 O12 P c1nc2c(n1[....
39 2BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
40 5BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
41 2BIR - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
42 1RGC - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
43 1GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
44 2HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
45 1HYF - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
46 7GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
47 3GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
48 3HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
49 1LOY - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
50 1BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
51 2GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
52 1RGL Kd = 37 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
53 1TRQ - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
54 4BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
55 1RMS - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
56 1RDS - GPC C19 H24 F N8 O11 P c1nc2c(n1[....
57 1FUT - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
50% Homology Family (60)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 6GSP - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
2 1TRP - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
3 5GSP - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
4 7RNT - 2AM C10 H14 N5 O7 P c1nc(c2c(n....
5 1FYS - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
6 1LOV - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
7 6RNT Kd = 4.3 mM 2AM C10 H14 N5 O7 P c1nc(c2c(n....
8 1RGA - G C10 H14 N5 O8 P c1nc2c(n1[....
9 1RLS - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
10 1LOW - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
11 1I2F - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
12 1DET Kd = 50 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
13 1HZ1 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
14 5BIR Kd = 255 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
15 1FZU - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
16 1B2M - G U34 n/a n/a
17 1BVI - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
18 1I2E - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
19 1G02 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
20 1BIR Kd = 138 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
21 1RNT Kd = 6.5 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
22 3BIR Kd = 112 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
23 1CH0 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
24 1I3I - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
25 4GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
26 2AAD - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
27 5HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
28 3BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
29 3SYU Kd = 50 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
30 1I0V - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
31 1RHL - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
32 1I2G - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
33 1I0X - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
34 1RGK Kd = 49.1 uM 2AM C10 H14 N5 O7 P c1nc(c2c(n....
35 1I3F - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
36 1LRA - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
37 4HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
38 2RNT - GPG C20 H25 N10 O12 P c1nc2c(n1[....
39 2BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
40 5BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
41 2BIR - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
42 1RGC - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
43 1GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
44 2HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
45 1HYF - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
46 7GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
47 3GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
48 3HOH - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
49 1LOY - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
50 1BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
51 2GSP - SGP C10 H12 N5 O6 P S c1nc2c(n1[....
52 1RGL Kd = 37 uM 2GP C10 H14 N5 O8 P c1nc2c(n1[....
53 1TRQ - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
54 4BU4 - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
55 1RMS - 3GP C10 H14 N5 O8 P c1nc2c(n1[....
56 1RDS - GPC C19 H24 F N8 O11 P c1nc2c(n1[....
57 3AGO - 3AM C10 H14 N5 O7 P c1nc(c2c(n....
58 3AHW - 2AM C10 H14 N5 O7 P c1nc(c2c(n....
59 3AGN - 3AM C10 H14 N5 O7 P c1nc(c2c(n....
60 1FUT - 2GP C10 H14 N5 O8 P c1nc2c(n1[....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: 3GP; Similar ligands found: 92
No: Ligand ECFP6 Tc MDL keys Tc
1 3GP 1 1
2 G3D 0.753086 0.959459
3 2GP 0.733333 0.959459
4 GMP 0.704225 0.853333
5 G4P 0.674419 0.959459
6 5GP 0.65 0.959459
7 G 0.65 0.959459
8 0O2 0.644444 0.959459
9 GDP 0.611765 0.946667
10 GNH 0.604651 0.934211
11 GP3 0.6 0.922078
12 GSP 0.595506 0.898734
13 GP2 0.593023 0.910256
14 GPG 0.591398 0.935065
15 GTP 0.590909 0.946667
16 G2P 0.577778 0.910256
17 GMV 0.573034 0.922078
18 ALF 5GP 0.573034 0.864198
19 P2G 0.571429 0.932432
20 GKE 0.56701 0.935065
21 GDD 0.56701 0.935065
22 GDC 0.56701 0.935065
23 GCP 0.566667 0.922078
24 GDP BEF 0.566667 0.909091
25 G1R 0.566667 0.934211
26 G C 0.566038 0.898734
27 GAV 0.565217 0.910256
28 GNP 0.56044 0.922078
29 GTP MG 0.56044 0.933333
30 9GM 0.56044 0.922078
31 P1G 0.55814 0.92
32 GDP ALF 0.536842 0.864198
33 GDP AF3 0.536842 0.864198
34 KB7 0.533333 0.825
35 G2R 0.53125 0.910256
36 KBD 0.525773 0.825
37 SGP 0.517241 0.871795
38 GDR 0.514852 0.910256
39 GFB 0.514852 0.910256
40 GKD 0.514563 0.935065
41 YGP 0.51 0.876543
42 G3A 0.509804 0.922078
43 6CK 0.509804 0.8875
44 BGO 0.509259 0.898734
45 U2G 0.509259 0.911392
46 DG 0.505747 0.909091
47 DGP 0.505747 0.909091
48 GH3 0.505263 0.946667
49 KBJ 0.504951 0.795181
50 Y9Z 0.504951 0.878049
51 G5P 0.504854 0.922078
52 JB2 0.5 0.910256
53 CG2 0.5 0.911392
54 3AM 0.5 0.90411
55 GTG 0.5 0.8875
56 GDX 0.495238 0.922078
57 GPD 0.495238 0.876543
58 GPX 0.494845 0.92
59 APC G U 0.491379 0.909091
60 GDP 7MG 0.490385 0.886076
61 DGI 0.48913 0.897436
62 JB3 0.486239 0.898734
63 GGM 0.482143 0.876543
64 35G 0.478261 0.932432
65 C2E 0.478261 0.92
66 PCG 0.478261 0.932432
67 5GP 5GP 0.473118 0.906667
68 2MD 0.469027 0.845238
69 DGT 0.46875 0.897436
70 NGD 0.468468 0.910256
71 FEG 0.468468 0.855422
72 ZGP 0.464286 0.845238
73 GPC 0.456897 0.878049
74 MGD 0.456897 0.845238
75 AKW 0.455357 0.843373
76 CAG 0.444444 0.835294
77 PGD O 0.442623 0.806818
78 TPG 0.434426 0.797753
79 DBG 0.434426 0.898734
80 G1R G1R 0.434426 0.875
81 I2C FE2 CMO CMO 0.433333 0.786517
82 UCG 0.430894 0.910256
83 MD1 0.429752 0.845238
84 PGD 0.429752 0.876543
85 G1G 0.425 0.876543
86 FE9 0.421488 0.755319
87 4BW 0.416667 0.92
88 1YD 0.416667 0.92
89 3ZE 0.410526 0.858974
90 CGP 0.410256 0.888889
91 A3P 0.402174 0.891892
92 G4M 0.401515 0.857143
Ligand no: 2; Ligand: SGP; Similar ligands found: 56
No: Ligand ECFP6 Tc MDL keys Tc
1 SGP 1 1
2 P2G 0.614458 0.907895
3 P1G 0.6 0.896104
4 GMP 0.576923 0.78481
5 GPX 0.56383 0.871795
6 2GP 0.517241 0.860759
7 3GP 0.517241 0.871795
8 5GP 0.488889 0.8375
9 G 0.488889 0.8375
10 QQX 0.488095 0.906667
11 C2E 0.483871 0.825
12 35G 0.483871 0.835443
13 PCG 0.483871 0.835443
14 GDP 0.463158 0.82716
15 5GP 5GP 0.463158 0.8125
16 1YC 0.457944 0.846154
17 GP3 0.452632 0.807229
18 GTP 0.44898 0.82716
19 GP2 0.447917 0.797619
20 GCP 0.444444 0.807229
21 GNH 0.443299 0.817073
22 KB7 0.443299 0.72093
23 GPG 0.442308 0.819277
24 G3D 0.44 0.8375
25 GSP 0.44 0.876543
26 G2P 0.44 0.797619
27 1YD 0.435185 0.825
28 4BW 0.435185 0.825
29 GMV 0.434343 0.807229
30 ALF 5GP 0.434343 0.758621
31 GAV 0.431373 0.864198
32 G4P 0.431373 0.8375
33 DGP 0.430108 0.817073
34 DG 0.430108 0.817073
35 GDP BEF 0.43 0.795181
36 G1R 0.43 0.817073
37 GTP MG 0.425743 0.814815
38 9GM 0.425743 0.807229
39 GNP 0.425743 0.807229
40 UCG 0.424 0.819277
41 GH3 0.421569 0.82716
42 DGI 0.418367 0.807229
43 0O2 0.415094 0.8375
44 4UR 0.413793 0.825
45 GKE 0.412844 0.819277
46 GDC 0.412844 0.819277
47 Y9Z 0.412844 0.772727
48 GDD 0.412844 0.819277
49 KT2 0.411765 0.825
50 GDP AF3 0.409524 0.758621
51 GDP ALF 0.409524 0.758621
52 G2R 0.40566 0.797619
53 G3A 0.405405 0.807229
54 DGT 0.401961 0.807229
55 KBD 0.401869 0.72093
56 G5P 0.401786 0.807229
Similar Ligands (3D)
Ligand no: 1; Ligand: 3GP; Similar ligands found: 32
No: Ligand Similarity coefficient
1 101 0.9386
2 A3G 0.9375
3 103 0.9276
4 CMP 0.9217
5 75G 0.9176
6 T3P 0.9095
7 A3S 0.9055
8 SP1 0.9044
9 7CH 0.9028
10 RP1 0.9016
11 UA3 0.9000
12 6J7 0.8997
13 6SW 0.8990
14 U3P 0.8988
15 UMF 0.8935
16 6SZ 0.8900
17 ACK 0.8900
18 C3P 0.8870
19 8MF 0.8855
20 6SX 0.8805
21 TMP 0.8801
22 2AM 0.8781
23 4UO 0.8764
24 2FA 0.8762
25 CD9 0.8724
26 IMV 0.8699
27 GNG 0.8654
28 CL9 0.8637
29 ADN 0.8614
30 KUP 0.8567
31 BGC BGC 0.8546
32 QRP 0.8518
Ligand no: 2; Ligand: SGP; Similar ligands found: 85
No: Ligand Similarity coefficient
1 ACK 0.9755
2 QQY 0.9694
3 OVE 0.9156
4 2AM 0.9112
5 XTS 0.9100
6 4UO 0.9071
7 101 0.9065
8 103 0.9056
9 IMG 0.9020
10 ADN 0.9018
11 3AM 0.9010
12 AZZ 0.9010
13 NOS 0.9009
14 AD3 0.8977
15 GNG 0.8973
16 T3P 0.8971
17 2FD 0.8968
18 FMC 0.8929
19 7D7 0.8919
20 MTA 0.8904
21 IMH 0.8902
22 5FD 0.8897
23 2FA 0.8896
24 CL9 0.8894
25 5CD 0.8888
26 UA2 0.8887
27 13A 0.8886
28 MG7 0.8883
29 5AD 0.8879
30 FMB 0.8877
31 MDR 0.8877
32 6CR 0.8875
33 9DI 0.8874
34 A4D 0.8854
35 5N5 0.8852
36 NWW 0.8851
37 5NB 0.8844
38 TBN 0.8838
39 3BH 0.8822
40 Y3J 0.8821
41 6MD 0.8821
42 DBM 0.8816
43 TAL 0.8816
44 GA2 0.8805
45 1DA 0.8800
46 3D1 0.8800
47 A 0.8792
48 8HG 0.8788
49 5ID 0.8773
50 CFE 0.8768
51 M2T 0.8765
52 DCF 0.8757
53 8OX 0.8751
54 RFZ 0.8715
55 PRH 0.8712
56 HPR 0.8712
57 MTP 0.8708
58 3AD 0.8701
59 FTU 0.8694
60 QRP 0.8693
61 SA0 0.8686
62 NOC 0.8686
63 RVC 0.8680
64 RPP 0.8669
65 9RM 0.8662
66 MTM 0.8657
67 26A 0.8650
68 AFX 0.8645
69 THM 0.8641
70 UM3 0.8634
71 EZN 0.8622
72 BGC GAL 0.8620
73 ARJ 0.8616
74 MTH 0.8595
75 IXM 0.8590
76 LM7 0.8587
77 MHD GAL 0.8581
78 AHU 0.8578
79 0DN 0.8573
80 683 0.8571
81 F01 0.8568
82 U3P 0.8561
83 ZYW 0.8554
84 N8M 0.8540
85 BMA BMA 0.8535
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1RNT; Ligand: 2GP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1rnt.bio1) has 21 residues
No: Leader PDB Ligand Sequence Similarity
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