Receptor
PDB id Resolution Class Description Source Keywords
2GTE 1.4 Å NON-ENZYME: BINDING DROSOPHILA OBP LUSH BOUND TO ATTRACTANT PHEROMONE 11-CIS- VACCENYL ACETATE DROSOPHILA MELANOGASTER PHEROMONE BINDING PROTEIN ODORANT BINDING PROTEIN PHEROMONE TRANSPORT PROTEIN
Ref.: ACTIVATION OF PHEROMONE-SENSITIVE NEURONS IS MEDIATED BY CONFORMATIONAL ACTIVATION OF PHEROMONE-BINDING PROTEIN CELL(CAMBRIDGE,MASS.) V. 133 1255 2008
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PO4 A:503;
 Invalid;
 none;
 submit data
94.971 O4 P [O-]P...
VA A:501;
B:502;
 Valid;
Valid;
 none;
none;
 submit data
310.515 C20 H38 O2 CCCCC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2GTE 1.4 Å NON-ENZYME: BINDING DROSOPHILA OBP LUSH BOUND TO ATTRACTANT PHEROMONE 11-CIS- VACCENYL ACETATE DROSOPHILA MELANOGASTER PHEROMONE BINDING PROTEIN ODORANT BINDING PROTEIN PHEROMONE TRANSPORT PROTEIN
Ref.: ACTIVATION OF PHEROMONE-SENSITIVE NEURONS IS MEDIATED BY CONFORMATIONAL ACTIVATION OF PHEROMONE-BINDING PROTEIN CELL(CAMBRIDGE,MASS.) V. 133 1255 2008
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 544 families.
1 2GTE - VA C20 H38 O2 CCCCCCC=C/....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 420 families.
1 2GTE - VA C20 H38 O2 CCCCCCC=C/....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 319 families.
1 2GTE - VA C20 H38 O2 CCCCCCC=C/....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: VA; Similar ligands found: 15
No: Ligand ECFP6 Tc MDL keys Tc
1 VA 1 1
2 MPG 0.557692 0.617647
3 PAM 0.511111 0.692308
4 VCA 0.511111 0.692308
5 ELA 0.478261 0.692308
6 NER 0.478261 0.692308
7 OLA 0.478261 0.692308
8 MVC 0.431034 0.617647
9 MYZ 0.425532 0.653846
10 3X1 0.413043 0.708333
11 CUY 0.408163 0.954545
12 6UL 0.408163 0.954545
13 CNS 0.408163 0.954545
14 OLC 0.40678 0.617647
15 OLB 0.40678 0.617647
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2GTE; Ligand: VA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2gte.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 2GTE; Ligand: VA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2gte.bio2) has 24 residues
No: Leader PDB Ligand Sequence Similarity
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