Receptor
PDB id Resolution Class Description Source Keywords
2GUD 0.94 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF A COMPLEX OF GRIFFITHSIN WITH MANNOSE AT 0.94 A RESOLUTION GRIFFITHSIA GRIFFITHSIN LECTINS DOMAIN SWAPPING MANNOSE BINDING HIVSARS SUGAR BINDING PROTEIN
Ref.: DOMAIN-SWAPPED STRUCTURE OF THE POTENT ANTIVIRAL PROTEIN GRIFFITHSIN AND ITS MODE OF CARBOHYDRATE BINDING. STRUCTURE V. 14 1127 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BMA A:123;
A:126;
Valid;
Valid;
none;
none;
submit data
180.156 C6 H12 O6 C([C@...
EDO A:502;
Invalid;
none;
submit data
62.068 C2 H6 O2 C(CO)...
MAN A:122;
A:124;
A:125;
B:122;
B:123;
B:124;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
submit data
180.156 C6 H12 O6 C([C@...
SO4 B:501;
Invalid;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2GUD 0.94 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF A COMPLEX OF GRIFFITHSIN WITH MANNOSE AT 0.94 A RESOLUTION GRIFFITHSIA GRIFFITHSIN LECTINS DOMAIN SWAPPING MANNOSE BINDING HIVSARS SUGAR BINDING PROTEIN
Ref.: DOMAIN-SWAPPED STRUCTURE OF THE POTENT ANTIVIRAL PROTEIN GRIFFITHSIN AND ITS MODE OF CARBOHYDRATE BINDING. STRUCTURE V. 14 1127 2006
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 2GUD - MAN C6 H12 O6 C([C@@H]1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 2GUD - MAN C6 H12 O6 C([C@@H]1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 2GUD - MAN C6 H12 O6 C([C@@H]1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BMA; Similar ligands found: 141
No: Ligand ECFP6 Tc MDL keys Tc
1 GAL 1 1
2 BMA 1 1
3 GXL 1 1
4 GLA 1 1
5 ALL 1 1
6 GLC 1 1
7 BGC 1 1
8 GIV 1 1
9 MAN 1 1
10 WOO 1 1
11 32O 0.653846 0.866667
12 RIB 0.653846 0.866667
13 FUB 0.653846 0.866667
14 Z6J 0.653846 0.866667
15 AHR 0.653846 0.866667
16 BMA BMA MAN 0.545455 0.823529
17 GLA BGC 0.511628 0.848485
18 LAK 0.511628 0.848485
19 BGC GLA 0.511628 0.848485
20 GLA BMA 0.511628 0.848485
21 MAN BMA 0.511628 0.848485
22 GLA GLC 0.511628 0.848485
23 GAL GAL 0.511628 0.848485
24 MLB 0.511628 0.848485
25 BMA GLA 0.511628 0.848485
26 BMA BMA BMA BMA BMA BMA MAN 0.5 0.823529
27 YDR 0.5 0.8
28 MAN BMA BMA BMA BMA BMA 0.5 0.823529
29 GLC GLC GLC GLC BGC 0.488889 0.848485
30 GLC GLC GLC 0.488889 0.848485
31 MAN MAN MAN 0.488889 0.848485
32 GLC GLC GLC GLC GLC BGC 0.488889 0.848485
33 BGP 0.461538 0.675
34 G6P 0.461538 0.675
35 M6P 0.461538 0.675
36 A6P 0.461538 0.675
37 M6D 0.461538 0.675
38 BG6 0.461538 0.675
39 SHG 0.457143 0.875
40 GAF 0.457143 0.875
41 G2F 0.457143 0.875
42 X6X 0.457143 0.777778
43 2FG 0.457143 0.875
44 G3F 0.457143 0.875
45 PA1 0.457143 0.777778
46 1GN 0.457143 0.777778
47 GCS 0.457143 0.777778
48 2H5 0.457143 0.875
49 LB2 0.454545 0.848485
50 BGC BMA 0.454545 0.848485
51 BGC GAL 0.454545 0.848485
52 MAL 0.454545 0.848485
53 GLC GAL 0.454545 0.848485
54 M3M 0.454545 0.848485
55 GLA GAL 0.454545 0.848485
56 MAB 0.454545 0.848485
57 GLC BGC 0.454545 0.848485
58 BMA BMA 0.454545 0.848485
59 LBT 0.454545 0.848485
60 MAL MAL 0.454545 0.823529
61 CBK 0.454545 0.848485
62 GLA GLA 0.454545 0.848485
63 MAN GLC 0.454545 0.848485
64 CBI 0.454545 0.848485
65 N9S 0.454545 0.848485
66 GAL GLC 0.454545 0.848485
67 BMA GAL 0.454545 0.848485
68 B2G 0.454545 0.848485
69 BGC GLC 0.454545 0.848485
70 LAT 0.454545 0.848485
71 GAL BGC 0.454545 0.848485
72 3MG 0.444444 0.875
73 TCB 0.444444 0.8
74 GLC SGC 0.444444 0.8
75 YIO 0.441176 0.870968
76 2GS 0.432432 0.875
77 BGC BGC 0.431818 0.848485
78 2M4 0.431818 0.848485
79 MAN MAN 0.431818 0.848485
80 AHR AHR 0.428571 0.764706
81 GLF 0.428571 0.84375
82 FUB AHR 0.428571 0.764706
83 CT3 0.416667 0.848485
84 GLC BGC GLC 0.416667 0.848485
85 MLR 0.416667 0.848485
86 GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
87 GLC GLC GLC GLC GLC 0.416667 0.848485
88 GAL FUC 0.416667 0.848485
89 BMA BMA BMA 0.416667 0.848485
90 CTR 0.416667 0.848485
91 BGC GLC GLC 0.416667 0.848485
92 BGC GLC GLC GLC GLC 0.416667 0.848485
93 MAN MAN BMA BMA BMA BMA 0.416667 0.848485
94 GLC GAL GAL 0.416667 0.848485
95 B4G 0.416667 0.848485
96 CEX 0.416667 0.848485
97 MAN BMA BMA BMA BMA 0.416667 0.848485
98 BMA BMA BMA BMA BMA 0.416667 0.848485
99 GLC BGC BGC BGC BGC BGC 0.416667 0.848485
100 CTT 0.416667 0.848485
101 GLC GLC BGC 0.416667 0.848485
102 DXI 0.416667 0.848485
103 GLC GLC BGC GLC GLC GLC GLC 0.416667 0.848485
104 BGC GLC GLC GLC 0.416667 0.848485
105 BGC BGC BGC GLC 0.416667 0.848485
106 BGC BGC BGC BGC BGC BGC 0.416667 0.848485
107 BMA BMA BMA BMA BMA BMA 0.416667 0.848485
108 MTT 0.416667 0.848485
109 BMA MAN BMA 0.416667 0.848485
110 BGC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
111 CE5 0.416667 0.848485
112 GAL GAL GAL 0.416667 0.848485
113 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.416667 0.848485
114 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
115 GLA GAL GLC 0.416667 0.848485
116 CE6 0.416667 0.848485
117 GLC BGC BGC BGC BGC 0.416667 0.848485
118 GLC BGC BGC 0.416667 0.848485
119 MAN BMA BMA 0.416667 0.848485
120 MT7 0.416667 0.848485
121 GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
122 CE8 0.416667 0.848485
123 CEY 0.416667 0.848485
124 BGC BGC BGC 0.408163 0.848485
125 BGC BGC BGC BGC BGC 0.408163 0.848485
126 GLC BGC BGC BGC BGC BGC BGC 0.408163 0.848485
127 SGC SGC BGC 0.408163 0.8
128 GLC BGC BGC BGC 0.408163 0.848485
129 BGC BGC BGC ASO BGC BGC ASO 0.408163 0.848485
130 BGC BGC BGC GLC BGC BGC 0.408163 0.848485
131 TRE 0.405405 0.848485
132 1LL 0.405405 0.771429
133 TDG 0.405405 0.771429
134 BM3 0.404762 0.7
135 NDG 0.404762 0.7
136 NAG 0.404762 0.7
137 HSQ 0.404762 0.7
138 A2G 0.404762 0.7
139 NGA 0.404762 0.7
140 FUB AHR AHR 0.4 0.764706
141 AHR AHR AHR 0.4 0.764706
Ligand no: 2; Ligand: MAN; Similar ligands found: 141
No: Ligand ECFP6 Tc MDL keys Tc
1 GAL 1 1
2 BMA 1 1
3 GXL 1 1
4 GLA 1 1
5 ALL 1 1
6 GLC 1 1
7 BGC 1 1
8 GIV 1 1
9 MAN 1 1
10 WOO 1 1
11 32O 0.653846 0.866667
12 RIB 0.653846 0.866667
13 FUB 0.653846 0.866667
14 Z6J 0.653846 0.866667
15 AHR 0.653846 0.866667
16 BMA BMA MAN 0.545455 0.823529
17 GLA BGC 0.511628 0.848485
18 LAK 0.511628 0.848485
19 BGC GLA 0.511628 0.848485
20 GLA BMA 0.511628 0.848485
21 MAN BMA 0.511628 0.848485
22 GLA GLC 0.511628 0.848485
23 GAL GAL 0.511628 0.848485
24 MLB 0.511628 0.848485
25 BMA GLA 0.511628 0.848485
26 BMA BMA BMA BMA BMA BMA MAN 0.5 0.823529
27 YDR 0.5 0.8
28 MAN BMA BMA BMA BMA BMA 0.5 0.823529
29 GLC GLC GLC GLC BGC 0.488889 0.848485
30 GLC GLC GLC 0.488889 0.848485
31 MAN MAN MAN 0.488889 0.848485
32 GLC GLC GLC GLC GLC BGC 0.488889 0.848485
33 BGP 0.461538 0.675
34 G6P 0.461538 0.675
35 M6P 0.461538 0.675
36 A6P 0.461538 0.675
37 M6D 0.461538 0.675
38 BG6 0.461538 0.675
39 SHG 0.457143 0.875
40 GAF 0.457143 0.875
41 G2F 0.457143 0.875
42 X6X 0.457143 0.777778
43 2FG 0.457143 0.875
44 G3F 0.457143 0.875
45 PA1 0.457143 0.777778
46 1GN 0.457143 0.777778
47 GCS 0.457143 0.777778
48 2H5 0.457143 0.875
49 LB2 0.454545 0.848485
50 BGC BMA 0.454545 0.848485
51 BGC GAL 0.454545 0.848485
52 MAL 0.454545 0.848485
53 GLC GAL 0.454545 0.848485
54 M3M 0.454545 0.848485
55 GLA GAL 0.454545 0.848485
56 MAB 0.454545 0.848485
57 GLC BGC 0.454545 0.848485
58 BMA BMA 0.454545 0.848485
59 LBT 0.454545 0.848485
60 MAL MAL 0.454545 0.823529
61 CBK 0.454545 0.848485
62 GLA GLA 0.454545 0.848485
63 MAN GLC 0.454545 0.848485
64 CBI 0.454545 0.848485
65 N9S 0.454545 0.848485
66 GAL GLC 0.454545 0.848485
67 BMA GAL 0.454545 0.848485
68 B2G 0.454545 0.848485
69 BGC GLC 0.454545 0.848485
70 LAT 0.454545 0.848485
71 GAL BGC 0.454545 0.848485
72 3MG 0.444444 0.875
73 TCB 0.444444 0.8
74 GLC SGC 0.444444 0.8
75 YIO 0.441176 0.870968
76 2GS 0.432432 0.875
77 BGC BGC 0.431818 0.848485
78 2M4 0.431818 0.848485
79 MAN MAN 0.431818 0.848485
80 AHR AHR 0.428571 0.764706
81 GLF 0.428571 0.84375
82 FUB AHR 0.428571 0.764706
83 CT3 0.416667 0.848485
84 GLC BGC GLC 0.416667 0.848485
85 MLR 0.416667 0.848485
86 GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
87 GLC GLC GLC GLC GLC 0.416667 0.848485
88 GAL FUC 0.416667 0.848485
89 BMA BMA BMA 0.416667 0.848485
90 CTR 0.416667 0.848485
91 BGC GLC GLC 0.416667 0.848485
92 BGC GLC GLC GLC GLC 0.416667 0.848485
93 MAN MAN BMA BMA BMA BMA 0.416667 0.848485
94 GLC GAL GAL 0.416667 0.848485
95 B4G 0.416667 0.848485
96 CEX 0.416667 0.848485
97 MAN BMA BMA BMA BMA 0.416667 0.848485
98 BMA BMA BMA BMA BMA 0.416667 0.848485
99 GLC BGC BGC BGC BGC BGC 0.416667 0.848485
100 CTT 0.416667 0.848485
101 GLC GLC BGC 0.416667 0.848485
102 DXI 0.416667 0.848485
103 GLC GLC BGC GLC GLC GLC GLC 0.416667 0.848485
104 BGC GLC GLC GLC 0.416667 0.848485
105 BGC BGC BGC GLC 0.416667 0.848485
106 BGC BGC BGC BGC BGC BGC 0.416667 0.848485
107 BMA BMA BMA BMA BMA BMA 0.416667 0.848485
108 MTT 0.416667 0.848485
109 BMA MAN BMA 0.416667 0.848485
110 BGC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
111 CE5 0.416667 0.848485
112 GAL GAL GAL 0.416667 0.848485
113 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.416667 0.848485
114 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
115 GLA GAL GLC 0.416667 0.848485
116 CE6 0.416667 0.848485
117 GLC BGC BGC BGC BGC 0.416667 0.848485
118 GLC BGC BGC 0.416667 0.848485
119 MAN BMA BMA 0.416667 0.848485
120 MT7 0.416667 0.848485
121 GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
122 CE8 0.416667 0.848485
123 CEY 0.416667 0.848485
124 BGC BGC BGC 0.408163 0.848485
125 BGC BGC BGC BGC BGC 0.408163 0.848485
126 GLC BGC BGC BGC BGC BGC BGC 0.408163 0.848485
127 SGC SGC BGC 0.408163 0.8
128 GLC BGC BGC BGC 0.408163 0.848485
129 BGC BGC BGC ASO BGC BGC ASO 0.408163 0.848485
130 BGC BGC BGC GLC BGC BGC 0.408163 0.848485
131 TRE 0.405405 0.848485
132 1LL 0.405405 0.771429
133 TDG 0.405405 0.771429
134 BM3 0.404762 0.7
135 NDG 0.404762 0.7
136 NAG 0.404762 0.7
137 HSQ 0.404762 0.7
138 A2G 0.404762 0.7
139 NGA 0.404762 0.7
140 FUB AHR AHR 0.4 0.764706
141 AHR AHR AHR 0.4 0.764706
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2GUD; Ligand: MAN; Similar sites found: 136
This union binding pocket(no: 1) in the query (biounit: 2gud.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2BQP GLC 0.00000004582 0.63784 None
2 1LES GLC FRU 0.00000009295 0.56367 None
3 1OFS SUC 0.00000007756 0.53414 None
4 2HMT NAI 0.01574 0.40516 None
5 3S2Y FMN 0.04551 0.40313 None
6 2JE7 XMM 0.000001203 0.55461 2.45902
7 3GD4 FAD 0.01987 0.41935 2.45902
8 3RFV 15L 0.01319 0.40318 2.45902
9 1DJN ADP 0.007693 0.4266 3.27869
10 5BUK FAD 0.04384 0.42863 4.09836
11 1SOW NAD 0.01902 0.42503 4.09836
12 16PK BIS 0.02239 0.41565 4.09836
13 3ZG6 APR 0.0108 0.40574 4.09836
14 3TKY SAH 0.01518 0.40016 4.09836
15 4ZGS NAD 0.01574 0.43479 4.91803
16 3P3G UKW 0.01844 0.43338 4.91803
17 3P3G 3P3 0.01844 0.43338 4.91803
18 3KLJ FAD 0.01665 0.42621 4.91803
19 1ZEM NAD 0.01016 0.42083 4.91803
20 2Q3R FMN 0.01706 0.41541 4.91803
21 3GDN FAD 0.04893 0.41388 4.91803
22 4GKY MAN 0.0007954 0.40962 4.91803
23 4D04 NAP 0.00622 0.45845 5.7377
24 4U36 TNR 0.007564 0.40835 5.7377
25 1VPE ANP 0.009662 0.40739 5.7377
26 2XVE FAD 0.01779 0.40417 5.7377
27 4L77 CNL 0.007908 0.40013 5.7377
28 2PHU MAN MAN 0.00000002704 0.6909 6.55738
29 2GNM MAN 0.00000002164 0.67344 6.55738
30 1Q8V MAN MAN MAN 0.00000005641 0.66364 6.55738
31 1Q8O MAN MMA 0.0000000469 0.66221 6.55738
32 2GNB MAN 0.00000001986 0.65621 6.55738
33 1Q8V MAN MAN 0.00000004813 0.65562 6.55738
34 2PHU MAN MAN MAN BMA MAN 0.000000105 0.65427 6.55738
35 2PHX MAN MAN MAN MAN 0.00000009521 0.64654 6.55738
36 3ZYR NAG NAG BMA MAN MAN NAG NAG 0.0000005799 0.64426 6.55738
37 1Q8P MAN MMA 0.00000009272 0.64416 6.55738
38 2GN3 MAN 0.00000002506 0.63702 6.55738
39 2AR6 NAG MAN MAN MAN NAG 0.0000003369 0.63645 6.55738
40 2AR6 NAG MAN 0.0000003112 0.62669 6.55738
41 2GN3 MMA 0.00000004182 0.6234 6.55738
42 3ZYR ASN NAG NAG BMA MAN MAN NAG NAG 0.0000006728 0.62236 6.55738
43 2GMM MAN MAN 0.0000000141 0.58654 6.55738
44 1UKG MMA 0.000002069 0.56737 6.55738
45 2PHX MAN MAN 0.000003218 0.56286 6.55738
46 2GND MAN 0.00000003411 0.54838 6.55738
47 2PHT MAN MAN MAN 0.00000007088 0.51926 6.55738
48 2GND MAN MMA 0.00000008459 0.50109 6.55738
49 2PHW MAN MAN 0.00000008904 0.50043 6.55738
50 2PHF MAN MAN 0.00000008965 0.50035 6.55738
51 2PHR MAN MAN 0.00000009327 0.49983 6.55738
52 2CUN 3PG 0.0001096 0.48859 6.55738
53 2PHR MAN MAN BMA MAN 0.00000008749 0.48604 6.55738
54 2PHF MAN MAN BMA MAN 0.00000009503 0.48508 6.55738
55 1Q8Q MAN MMA 0.000002799 0.48293 6.55738
56 1Q8S MAN MMA 0.000002835 0.48252 6.55738
57 2PHT MAN MAN MAN BMA MAN 0.0000001092 0.47038 6.55738
58 2PHW MAN MAN MAN BMA MAN MAN MAN 0.0000001363 0.46806 6.55738
59 2GMP NAG MAN 0.000009094 0.46655 6.55738
60 1LOB MMA 0.0000008762 0.46069 6.55738
61 5L4S 6KX 0.008243 0.45456 6.55738
62 5L4S NAP 0.008243 0.45456 6.55738
63 2AUY NAG MAN MMA 0.0000001854 0.45334 6.55738
64 4USQ FAD 0.02236 0.44367 6.55738
65 2YVF NAD 0.03161 0.4345 6.55738
66 1OFD FMN 0.009972 0.43231 6.55738
67 1OFD AKG 0.009208 0.43231 6.55738
68 5A1S FLC 0.001429 0.42834 6.55738
69 1LOF MAN BMA NAG NAG MAN NAG GAL GAL 0.00001994 0.40212 6.55738
70 1HQL GLA MBG 0.00002121 0.4934 7.37705
71 4RPL 3UC 0.006887 0.46753 7.37705
72 4RPL FAD 0.02204 0.44307 7.37705
73 1BXG NAD 0.003881 0.43343 7.37705
74 4D42 W0I 0.02385 0.42504 7.37705
75 4D42 NAP 0.02385 0.42504 7.37705
76 2RGO FAD 0.03799 0.40362 7.37705
77 4M00 SUC 0.000001845 0.58691 8.19672
78 5DEX 5E0 0.005346 0.43239 8.19672
79 5MDH NAD 0.009087 0.42635 8.19672
80 4MRT COA 0.01644 0.41017 8.19672
81 1WMA AB3 0.004616 0.47218 9.01639
82 5GM9 CBK 0.008499 0.43175 9.01639
83 2F5Z FAD 0.01026 0.43047 9.01639
84 4POO SAM 0.01442 0.42425 9.01639
85 4PLG NAI 0.0261 0.42095 9.01639
86 1LDN NAD 0.03574 0.41148 9.01639
87 1NLU IVA PHI TYB 0.008379 0.40506 9.01639
88 1LYX PGA 0.000474 0.47372 9.83607
89 1U6R ADP 0.003267 0.45339 9.83607
90 3UCL FAD 0.01214 0.43478 9.83607
91 3UCL NAP 0.0129 0.43478 9.83607
92 3UCL CYH 0.01214 0.43478 9.83607
93 4K81 GTP 0.02415 0.41047 9.83607
94 1MVQ MMA 0.000000686 0.58781 10.6557
95 1VRP ADP 0.004488 0.43193 10.6557
96 4DQ2 BTX 0.004114 0.42704 10.6557
97 1D4D FAD 0.006531 0.41763 10.6557
98 2NXW TPP 0.04383 0.41005 11.4754
99 1MHW BP4 CYS DAR TYR PEA 0.03634 0.41355 11.9048
100 1E6E FAD 0.04743 0.40817 13.1148
101 3RNM FAD 0.006314 0.45302 13.7931
102 4C3Y ANB 0.007867 0.43628 13.9344
103 4C3Y FAD 0.006726 0.43628 13.9344
104 1FIQ FAD 0.02496 0.41053 13.9344
105 1ZC3 GNP 0.0257 0.4033 13.9344
106 1DQX BMP 0.02471 0.40157 13.9344
107 1LTH NAD 0.04107 0.40121 13.9344
108 1M15 ADP 0.01058 0.44738 14.7541
109 1M15 ARG 0.01058 0.44738 14.7541
110 1FL2 FAD 0.03378 0.43219 17.2131
111 3JQ3 ADP 0.005784 0.4112 17.2131
112 1KGQ NPI 0.03236 0.40589 17.2131
113 1KGQ SCO 0.03321 0.40589 17.2131
114 3ZEI AWH 0.023 0.42283 19.6721
115 3PT9 SAH 0.009865 0.40181 19.6721
116 2FMD MAN MAN 0.0000001963 0.58663 20.4918
117 1ELI PYC 0.0001549 0.52674 21.3115
118 3QDV A2G 0.01602 0.40894 21.3115
119 3QDY A2G GAL 0.01976 0.40685 21.3115
120 1XXR MAN 0.0000000002463 0.69906 23.7705
121 1VBO MAN 0.00000001872 0.6184 24.5902
122 1VBO MAN MAN MAN 0.00000001449 0.59424 24.5902
123 1JOT GAL A2G 0.0000489 0.51472 24.5902
124 1C3M MAN MAN 0.0000000003885 0.84028 34.4262
125 1WS5 MMA 0.0000276 0.53385 37.7049
126 1WS4 AMG 0.00002374 0.52976 37.7049
127 1KUJ MMA 0.00003816 0.527 37.7049
128 1UGY GLA BGC 0.00002791 0.52476 37.7049
129 1WS4 GYP 0.00003234 0.52395 37.7049
130 1UGY GLA GLC 0.00003696 0.51983 37.7049
131 1UGW GAL 0.00004197 0.51513 37.7049
132 1M26 GAL A2G 0.00009464 0.50785 37.7049
133 1JAC AMG 0.00008901 0.49133 37.7049
134 1UGX GAL MGC 0.00001031 0.42855 37.7049
135 1TOQ AMG 0.00005412 0.50944 40.1639
136 2BMZ XLM 0.000000001113 0.43215 48.3607
Pocket No.: 2; Query (leader) PDB : 2GUD; Ligand: BMA; Similar sites found: 107
This union binding pocket(no: 2) in the query (biounit: 2gud.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2BQP GLC 0.0000008062 0.5719 None
2 1LES GLC FRU 0.000001568 0.51511 None
3 1OFS SUC 0.000001218 0.49331 None
4 4IGH 1EA 0.0276 0.4134 1.63934
5 4IGH ORO 0.0276 0.4134 1.63934
6 4IGH FMN 0.0276 0.4134 1.63934
7 4YEF 4CQ 0.01656 0.42128 2.24719
8 2YBQ SAH 0.04165 0.41788 3.27869
9 4JWH SAH 0.02201 0.413 3.27869
10 3TKY SAH 0.002315 0.4677 4.09836
11 3P3G 3P3 0.01742 0.43685 4.91803
12 3P3G UKW 0.01742 0.43685 4.91803
13 3GDN HBX 0.03044 0.43516 4.91803
14 3GDN FAD 0.02489 0.43432 4.91803
15 4ZGS NAD 0.034 0.41481 4.91803
16 3KLJ FAD 0.03863 0.41186 4.91803
17 4J7U YTZ 0.04251 0.4086 4.91803
18 4J7U NAP 0.04251 0.4086 4.91803
19 3ICS FAD 0.03914 0.4037 4.91803
20 1ZGA SAH 0.01474 0.43067 5.7377
21 1VPE ANP 0.008662 0.41029 5.7377
22 2XVE FAD 0.01733 0.40571 5.7377
23 3TO7 COA 0.03613 0.40276 5.7377
24 3C6K SPD 0.04885 0.40072 5.7377
25 3C6K MTA 0.04885 0.40072 5.7377
26 1Q8O MAN MMA 0.0000004526 0.60019 6.55738
27 1Q8V MAN MAN MAN 0.0000006988 0.5909 6.55738
28 1Q8V MAN MAN 0.0000005623 0.58609 6.55738
29 2GN3 MAN 0.0000002146 0.5793 6.55738
30 2GN3 MMA 0.0000003217 0.56901 6.55738
31 2AR6 NAG MAN MAN MAN NAG 0.000004076 0.56234 6.55738
32 2AR6 NAG MAN 0.000003461 0.55706 6.55738
33 2GNB MAN 0.0000003312 0.54657 6.55738
34 2GMM MAN MAN 0.0000002259 0.53816 6.55738
35 2GNM MAN 0.0000003663 0.52644 6.55738
36 2PHU MAN MAN 0.000000292 0.51637 6.55738
37 2GND MAN 0.0000004018 0.51071 6.55738
38 1UKG MMA 0.000005932 0.48631 6.55738
39 2PHT MAN MAN MAN 0.0000008298 0.48528 6.55738
40 2PHF MAN MAN 0.000001024 0.46956 6.55738
41 2GND MAN MMA 0.000001048 0.46928 6.55738
42 1Q8P MAN MMA 0.000001096 0.4687 6.55738
43 2PHW MAN MAN 0.00000112 0.46843 6.55738
44 2PHX MAN MAN MAN MAN 0.000001157 0.46798 6.55738
45 2PHR MAN MAN 0.000001164 0.46793 6.55738
46 1Q8S MAN MMA 0.000008591 0.46747 6.55738
47 2PHX MAN MAN 0.000009347 0.46643 6.55738
48 1Q8Q MAN MMA 0.000009675 0.46556 6.55738
49 4USQ FAD 0.01394 0.46295 6.55738
50 2CUN 3PG 0.000075 0.46209 6.55738
51 2PHR MAN MAN BMA MAN 0.000001024 0.45739 6.55738
52 2PHF MAN MAN BMA MAN 0.000001132 0.45621 6.55738
53 2GMP NAG MAN 0.000018 0.45545 6.55738
54 5A1S FLC 0.000288 0.45159 6.55738
55 5L4S 6KX 0.007994 0.44435 6.55738
56 5L4S NAP 0.007994 0.44435 6.55738
57 2PHU MAN MAN MAN BMA MAN 0.000001226 0.44418 6.55738
58 2PHT MAN MAN MAN BMA MAN 0.000001292 0.44369 6.55738
59 2PHW MAN MAN MAN BMA MAN MAN MAN 0.000001546 0.44181 6.55738
60 2AUY NAG MAN MMA 0.000002138 0.42868 6.55738
61 1LOB MMA 0.00001427 0.42754 6.55738
62 1FP1 SAH 0.0224 0.42533 6.55738
63 1YQS BSA 0.02544 0.40902 6.55738
64 4J36 FAD 0.03733 0.41102 6.98795
65 4RPL 3UC 0.001954 0.51002 7.37705
66 4RPL FAD 0.008396 0.464 7.37705
67 1BXG NAD 0.002679 0.44611 7.37705
68 2B4R NAD 0.01275 0.40634 7.37705
69 4D42 W0I 0.03667 0.40228 7.37705
70 4D42 NAP 0.03667 0.40228 7.37705
71 1BXG HCI 0.0119 0.40212 7.37705
72 4M00 SUC 0.00001342 0.48499 8.19672
73 5DEX 5E0 0.01374 0.40608 8.19672
74 2Y6Q FAD 0.009576 0.42367 9.01639
75 5GM9 CBK 0.0077 0.4052 9.01639
76 1LDN NAD 0.04278 0.403 9.01639
77 2F5Z FAD 0.02851 0.40099 9.01639
78 3Q9T FAY 0.01183 0.44653 9.83607
79 3UCL FAD 0.0128 0.43071 9.83607
80 3UCL CYH 0.0128 0.43071 9.83607
81 3UCL NAP 0.01359 0.43071 9.83607
82 1U6R ADP 0.0166 0.41826 9.83607
83 2DFV NAD 0.0413 0.40756 9.83607
84 5X20 NAD 0.02573 0.40534 9.83607
85 1D4D FAD 0.008093 0.42535 10.6557
86 4C3Y FAD 0.01306 0.44329 13.9344
87 4C3Y ANB 0.01002 0.4379 13.9344
88 5FJN FAD 0.02874 0.40627 13.9344
89 5FJN BE2 0.03043 0.40627 13.9344
90 1ZC3 GNP 0.02407 0.40528 13.9344
91 2RCU BUJ 0.03448 0.40564 14.7541
92 1ELI PYC 0.0002006 0.52943 21.3115
93 1XXR MAN 0.000000004141 0.63828 23.7705
94 1VBO MAN 0.00000009702 0.57938 24.5902
95 1VBO MAN MAN MAN 0.00000007028 0.56327 24.5902
96 1C3M MAN MAN 0.002305 0.50616 34.4262
97 1WS5 MMA 0.0000416 0.51663 37.7049
98 1WS4 AMG 0.00004835 0.51017 37.7049
99 1WS4 GYP 0.00005744 0.50786 37.7049
100 1UGY GLA BGC 0.00005175 0.50668 37.7049
101 1UGY GLA GLC 0.00007963 0.50006 37.7049
102 1KUJ MMA 0.0001001 0.49942 37.7049
103 1UGW GAL 0.00009488 0.49408 37.7049
104 1M26 GAL A2G 0.0002282 0.48525 37.7049
105 1JAC AMG 0.0002896 0.46211 37.7049
106 1TOQ AMG 0.00009038 0.49403 40.1639
107 2BMZ XLM 0.000000002022 0.42674 48.3607
Pocket No.: 3; Query (leader) PDB : 2GUD; Ligand: MAN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2gud.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2GUD; Ligand: MAN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2gud.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2GUD; Ligand: MAN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 2gud.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 2GUD; Ligand: BMA; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 2gud.bio1) has 7 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 2GUD; Ligand: MAN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 2gud.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 2GUD; Ligand: MAN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 2gud.bio1) has 8 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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