Receptor
PDB id Resolution Class Description Source Keywords
2HFN 1.8 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPTOR SLR169 DISTINCT STRUCTURAL STATES RELATED TO SIGNALING SYNECHOCYSTIS SP. BETA SHEET FERREDOXIN-LIKE FOLD FLAVIN BINDING PROTEIN PHOTORECEPTOR ELECTRON TRANSPORT
Ref.: CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPT SLR1694 REVEAL DISTINCT STRUCTURAL STATES RELATED T SIGNALING. BIOCHEMISTRY V. 45 12687 2006
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FMN A:201;
B:201;
C:201;
D:201;
E:201;
F:201;
G:201;
H:201;
I:201;
J:201;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
456.344 C17 H21 N4 O9 P Cc1cc...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2HFN 1.8 Å NON-ENZYME: SIGNAL_HORMONE CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPTOR SLR169 DISTINCT STRUCTURAL STATES RELATED TO SIGNALING SYNECHOCYSTIS SP. BETA SHEET FERREDOXIN-LIKE FOLD FLAVIN BINDING PROTEIN PHOTORECEPTOR ELECTRON TRANSPORT
Ref.: CRYSTAL STRUCTURES OF THE SYNECHOCYSTIS PHOTORECEPT SLR1694 REVEAL DISTINCT STRUCTURAL STATES RELATED T SIGNALING. BIOCHEMISTRY V. 45 12687 2006
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 263 families.
1 2HFN - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
2 3MZI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 2HFO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 196 families.
1 2HFN - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
2 3MZI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 2HFO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 141 families.
1 1X0P - FAD C27 H33 N9 O15 P2 Cc1cc2c(cc....
2 2HFN - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
3 3MZI - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
4 2HFO - FMN C17 H21 N4 O9 P Cc1cc2c(cc....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FMN; Similar ligands found: 16
No: Ligand ECFP6 Tc MDL keys Tc
1 FMN 1 1
2 RBF 0.75641 0.876712
3 RS3 0.571429 0.831169
4 FAS 0.543307 0.876543
5 FAD 0.543307 0.876543
6 FAE 0.539062 0.865854
7 DAL FAD PER 0.5 0.833333
8 LFN 0.475 0.643836
9 C3F 0.473684 0.74359
10 CF4 0.463918 0.734177
11 FAY 0.446043 0.864198
12 FNR 0.444444 0.909091
13 RFL 0.442857 0.845238
14 4LS 0.411215 0.875
15 1VY 0.406593 0.769231
16 DLZ 0.404494 0.782051
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2hfn.bio1) has 19 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: 54
This union binding pocket(no: 6) in the query (biounit: 2hfn.bio1) has 20 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5H9Q TD2 0.001444 0.45875 None
2 2Z6C FMN 0.001706 0.43054 None
3 3KDU NKS 0.02816 0.40636 None
4 1POC GEL 0.00598 0.40463 None
5 2QZT PLM 0.01413 0.40252 None
6 2E2R 2OH 0.02029 0.40231 1.30719
7 4R38 RBF 0.003669 0.41788 1.42857
8 4B7P 9UN 0.009873 0.42692 1.96078
9 2V0U FMN 0.0008209 0.44448 2.05479
10 5EFW FMN 0.001294 0.42714 2.06897
11 5DJU FMN 0.001845 0.41505 2.06897
12 5FQK 6NT 0.01924 0.40534 2.23048
13 2WKQ FMN 0.001144 0.4291 2.61438
14 3AJH BL3 0.003959 0.41448 2.61438
15 2C78 PUL 0.03026 0.40988 3.26797
16 3W68 VIV 0.007362 0.40797 3.26797
17 3D72 FAD 0.00209 0.44346 3.3557
18 5DCH 1YO 0.02064 0.40444 3.92157
19 4MNS 2AX 0.01315 0.42255 4.57516
20 4V24 GYR 0.008193 0.41731 4.57516
21 5LUN OGA 0.01099 0.41691 4.57516
22 2ZCQ B65 0.03198 0.40041 4.57516
23 2YMZ LAT 0.003357 0.43461 4.61538
24 2XMY CDK 0.04131 0.40684 5.88235
25 3P7N FMN 0.001041 0.43996 6.53595
26 1UJ2 C5P 0.01312 0.40125 6.53595
27 5B4B LP5 0.01134 0.40825 7.84314
28 5V1B 8UY 0.01977 0.40394 7.84314
29 5AWV GHP 3MY 3FG GHP GHP OMY 3FG NAG MAN 0.0135 0.4238 8.49673
30 4RW3 TDA 0.0364 0.4095 9.60265
31 5DKK FMN 0.0007655 0.43643 9.65517
32 2Z6D FMN 0.001885 0.42864 10
33 3T50 FMN 0.0005514 0.45206 10.4575
34 4HIA FMN 0.005809 0.42789 10.4575
35 3OV6 MK0 0.01072 0.41064 10.4575
36 2E3N 6CM 0.01242 0.4101 10.4575
37 4DXJ IPE 0.003421 0.43491 11.1111
38 4DXJ 0M9 0.01028 0.41021 11.1111
39 5EW0 3C7 0.002709 0.4477 12.4183
40 3LDW ZOL 0.008664 0.41619 13.0719
41 4KWI NAP 0.02274 0.40585 14.3791
42 4KWI 1TJ 0.02372 0.40585 14.3791
43 5DJT FMN 0.001432 0.43387 14.7541
44 3G08 FEE 0.01286 0.42693 16.9935
45 3SCM LGN 0.02978 0.40954 16.9935
46 5L2J 6UL 0.02147 0.42187 17.6471
47 5L2J 70E 0.02267 0.42187 17.6471
48 5U98 1KX 0.03698 0.40681 17.6471
49 4EES FMN 0.001053 0.44183 27.8261
50 2BYC FMN 0.00000000001249 0.75108 30.6569
51 3GFZ FMN 0.000000001403 0.65478 35.9477
52 2IYG FMN 0.000000000006237 0.7443 38.7097
53 5MBC FMN 0.00000000001875 0.75995 41.8301
54 1YRX FMN 0.00000000002367 0.73975 42.9752
Pocket No.: 7; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 2hfn.bio1) has 20 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 2HFN; Ligand: FMN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 2hfn.bio1) has 18 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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